BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3572
Length=176
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610708|ref|NP_218089.1| hypothetical protein Rv3572 [Mycoba... 363 6e-99
gi|308232503|ref|ZP_07416263.2| hypothetical protein TMAG_00062 ... 337 5e-91
gi|183985035|ref|YP_001853326.1| hypothetical protein MMAR_5067 ... 322 2e-86
gi|118619322|ref|YP_907654.1| hypothetical protein MUL_4143 [Myc... 315 2e-84
gi|240169796|ref|ZP_04748455.1| hypothetical protein MkanA1_1081... 299 1e-79
gi|296166621|ref|ZP_06849049.1| conserved hypothetical protein [... 253 1e-65
gi|254822728|ref|ZP_05227729.1| hypothetical protein MintA_22554... 247 6e-64
gi|118467177|ref|YP_879869.1| hypothetical protein MAV_0589 [Myc... 240 7e-62
gi|41406593|ref|NP_959429.1| hypothetical protein MAP0495c [Myco... 239 2e-61
gi|254773546|ref|ZP_05215062.1| hypothetical protein MaviaA2_025... 238 3e-61
gi|342862404|ref|ZP_08719044.1| hypothetical protein MCOL_26053 ... 236 7e-61
gi|336458489|gb|EGO37462.1| hypothetical protein MAPs_12770 [Myc... 236 8e-61
gi|333992496|ref|YP_004525110.1| hypothetical protein JDM601_385... 189 1e-46
gi|169627685|ref|YP_001701334.1| hypothetical protein MAB_0582c ... 123 8e-27
gi|120406258|ref|YP_956087.1| hypothetical protein Mvan_5310 [My... 119 1e-25
gi|145222053|ref|YP_001132731.1| hypothetical protein Mflv_1461 ... 111 5e-23
gi|126437660|ref|YP_001073351.1| hypothetical protein Mjls_5096 ... 108 3e-22
gi|108801674|ref|YP_641871.1| hypothetical protein Mmcs_4711 [My... 108 3e-22
gi|118469878|ref|YP_890264.1| hypothetical protein MSMEG_6040 [M... 90.5 9e-17
gi|164660500|ref|XP_001731373.1| hypothetical protein MGL_1556 [... 35.4 3.7
gi|323371174|gb|ADX59436.1| beta-galactosidase [Coffea arabica] 34.3 7.3
gi|121702677|ref|XP_001269603.1| rerric reductase like transmemb... 34.3 7.6
>gi|15610708|ref|NP_218089.1| hypothetical protein Rv3572 [Mycobacterium tuberculosis H37Rv]
gi|15843185|ref|NP_338222.1| hypothetical protein MT3677 [Mycobacterium tuberculosis CDC1551]
gi|31794749|ref|NP_857242.1| hypothetical protein Mb3603 [Mycobacterium bovis AF2122/97]
72 more sequence titles
Length=176
Score = 363 bits (931), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 176/176 (100%), Positives = 176/176 (100%), Gaps = 0/176 (0%)
Query 1 MTRLIPGCTLVGLMLTLLPAPTSAAGSNTATTLFPVDEVTQLETHTFLDCHPNGSCDFVA 60
MTRLIPGCTLVGLMLTLLPAPTSAAGSNTATTLFPVDEVTQLETHTFLDCHPNGSCDFVA
Sbjct 1 MTRLIPGCTLVGLMLTLLPAPTSAAGSNTATTLFPVDEVTQLETHTFLDCHPNGSCDFVA 60
Query 61 GANLRTPDGPTGFPPGLWARQTTEIRSTNRLAYLDAHATSQFERVMKAGGSDVITTVYFG 120
GANLRTPDGPTGFPPGLWARQTTEIRSTNRLAYLDAHATSQFERVMKAGGSDVITTVYFG
Sbjct 61 GANLRTPDGPTGFPPGLWARQTTEIRSTNRLAYLDAHATSQFERVMKAGGSDVITTVYFG 120
Query 121 EGPPDKYQTTGVIDSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANFS 176
EGPPDKYQTTGVIDSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANFS
Sbjct 121 EGPPDKYQTTGVIDSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANFS 176
>gi|308232503|ref|ZP_07416263.2| hypothetical protein TMAG_00062 [Mycobacterium tuberculosis SUMu001]
gi|308378373|ref|ZP_07482365.2| hypothetical protein TMIG_03195 [Mycobacterium tuberculosis SUMu009]
gi|308380736|ref|ZP_07490923.2| hypothetical protein TMKG_00810 [Mycobacterium tuberculosis SUMu011]
gi|308213798|gb|EFO73197.1| hypothetical protein TMAG_00062 [Mycobacterium tuberculosis SUMu001]
gi|308352796|gb|EFP41647.1| hypothetical protein TMIG_03195 [Mycobacterium tuberculosis SUMu009]
gi|308360601|gb|EFP49452.1| hypothetical protein TMKG_00810 [Mycobacterium tuberculosis SUMu011]
Length=163
Score = 337 bits (863), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 163/163 (100%), Positives = 163/163 (100%), Gaps = 0/163 (0%)
Query 14 MLTLLPAPTSAAGSNTATTLFPVDEVTQLETHTFLDCHPNGSCDFVAGANLRTPDGPTGF 73
MLTLLPAPTSAAGSNTATTLFPVDEVTQLETHTFLDCHPNGSCDFVAGANLRTPDGPTGF
Sbjct 1 MLTLLPAPTSAAGSNTATTLFPVDEVTQLETHTFLDCHPNGSCDFVAGANLRTPDGPTGF 60
Query 74 PPGLWARQTTEIRSTNRLAYLDAHATSQFERVMKAGGSDVITTVYFGEGPPDKYQTTGVI 133
PPGLWARQTTEIRSTNRLAYLDAHATSQFERVMKAGGSDVITTVYFGEGPPDKYQTTGVI
Sbjct 61 PPGLWARQTTEIRSTNRLAYLDAHATSQFERVMKAGGSDVITTVYFGEGPPDKYQTTGVI 120
Query 134 DSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANFS 176
DSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANFS
Sbjct 121 DSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANFS 163
>gi|183985035|ref|YP_001853326.1| hypothetical protein MMAR_5067 [Mycobacterium marinum M]
gi|183178361|gb|ACC43471.1| conserved hypothetical secreted protein [Mycobacterium marinum
M]
Length=176
Score = 322 bits (824), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/176 (87%), Positives = 161/176 (92%), Gaps = 0/176 (0%)
Query 1 MTRLIPGCTLVGLMLTLLPAPTSAAGSNTATTLFPVDEVTQLETHTFLDCHPNGSCDFVA 60
M RL+ G + LMLT LP+PTSAA SNTATTLFPVDE TQLETH+F+DCHPNGSCDFVA
Sbjct 1 MRRLMTGLAIPALMLTFLPSPTSAAASNTATTLFPVDETTQLETHSFVDCHPNGSCDFVA 60
Query 61 GANLRTPDGPTGFPPGLWARQTTEIRSTNRLAYLDAHATSQFERVMKAGGSDVITTVYFG 120
GANLRTP+GPTGFPPGLWARQTTEIRS+NRLAYLDAHATSQFERVMK GSDVITTVYFG
Sbjct 61 GANLRTPEGPTGFPPGLWARQTTEIRSSNRLAYLDAHATSQFERVMKQAGSDVITTVYFG 120
Query 121 EGPPDKYQTTGVIDSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANFS 176
EGPPDKYQTTGVIDS +W TGQPMT+VNV VCTHMQVVYPGVNLTSPSTCAQ NFS
Sbjct 121 EGPPDKYQTTGVIDSASWETGQPMTNVNVYVCTHMQVVYPGVNLTSPSTCAQTNFS 176
>gi|118619322|ref|YP_907654.1| hypothetical protein MUL_4143 [Mycobacterium ulcerans Agy99]
gi|118571432|gb|ABL06183.1| conserved hypothetical secreted protein [Mycobacterium ulcerans
Agy99]
Length=176
Score = 315 bits (807), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 150/176 (86%), Positives = 159/176 (91%), Gaps = 0/176 (0%)
Query 1 MTRLIPGCTLVGLMLTLLPAPTSAAGSNTATTLFPVDEVTQLETHTFLDCHPNGSCDFVA 60
M RL+ G + LMLT LP+PTSAA SNTATTLFPVDE TQLETH+F+DCHPNGS DFVA
Sbjct 1 MRRLMTGLAIPALMLTFLPSPTSAAASNTATTLFPVDETTQLETHSFVDCHPNGSRDFVA 60
Query 61 GANLRTPDGPTGFPPGLWARQTTEIRSTNRLAYLDAHATSQFERVMKAGGSDVITTVYFG 120
GANLRTP+GPTGFPPGLWARQTTEIRS+NRLAYL AHATSQFERVMK GSDVITTVYFG
Sbjct 61 GANLRTPEGPTGFPPGLWARQTTEIRSSNRLAYLGAHATSQFERVMKQAGSDVITTVYFG 120
Query 121 EGPPDKYQTTGVIDSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANFS 176
EGPPDKYQTTGVIDS +W TGQPMT+VNV VCTHMQVVYPGVNLTSPSTCAQ NFS
Sbjct 121 EGPPDKYQTTGVIDSASWETGQPMTNVNVYVCTHMQVVYPGVNLTSPSTCAQTNFS 176
>gi|240169796|ref|ZP_04748455.1| hypothetical protein MkanA1_10812 [Mycobacterium kansasii ATCC
12478]
Length=180
Score = 299 bits (766), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/180 (81%), Positives = 157/180 (88%), Gaps = 4/180 (2%)
Query 1 MTRLIPGCTLV----GLMLTLLPAPTSAAGSNTATTLFPVDEVTQLETHTFLDCHPNGSC 56
M RL+PG +V G++L + PAP S A SNTATTLFPVD+ TQLETHTF++CHPNGSC
Sbjct 1 MKRLLPGAPIVAAITGVLLAVAPAPQSQAASNTATTLFPVDDTTQLETHTFVNCHPNGSC 60
Query 57 DFVAGANLRTPDGPTGFPPGLWARQTTEIRSTNRLAYLDAHATSQFERVMKAGGSDVITT 116
DFVAGA+LRTPDG TGFPP LWARQTTEIR TNRL YLDAHAT QFERVMKAGGSDVITT
Sbjct 61 DFVAGADLRTPDGVTGFPPDLWARQTTEIRPTNRLTYLDAHATGQFERVMKAGGSDVITT 120
Query 117 VYFGEGPPDKYQTTGVIDSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANFS 176
VYFGEGPPDKYQTTGVIDST+WSTGQP T+ VIVCTH+QVVY GVNLTSPSTCAQ NFS
Sbjct 121 VYFGEGPPDKYQTTGVIDSTSWSTGQPSTNAGVIVCTHIQVVYSGVNLTSPSTCAQTNFS 180
>gi|296166621|ref|ZP_06849049.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898024|gb|EFG77602.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=177
Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/177 (74%), Positives = 144/177 (82%), Gaps = 1/177 (0%)
Query 1 MTRLIPGCTLVGLMLTLLPAPTSAAGSNTATTLFPVDEVTQLETHTFLDC-HPNGSCDFV 59
M RLI +VG LT PAP + A SNTATTLFP+D QLET T L+C +G CDF
Sbjct 1 MKRLITVFAVVGSALTFAPAPAAGAASNTATTLFPLDGPNQLETRTVLNCFKSDGHCDFT 60
Query 60 AGANLRTPDGPTGFPPGLWARQTTEIRSTNRLAYLDAHATSQFERVMKAGGSDVITTVYF 119
AGA++ TPDG TGFPPGLWARQTTEIRS+NRLAYLDAHATSQ+ERVMK+ GSD ITTVYF
Sbjct 61 AGADMLTPDGVTGFPPGLWARQTTEIRSSNRLAYLDAHATSQYERVMKSMGSDEITTVYF 120
Query 120 GEGPPDKYQTTGVIDSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANFS 176
GEGPPDKYQT+G IDST+W TGQP TD NVIVCTH+QVVYPG+N TSPSTCAQ FS
Sbjct 121 GEGPPDKYQTSGRIDSTDWQTGQPKTDNNVIVCTHIQVVYPGINTTSPSTCAQTTFS 177
>gi|254822728|ref|ZP_05227729.1| hypothetical protein MintA_22554 [Mycobacterium intracellulare
ATCC 13950]
Length=180
Score = 247 bits (630), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 121/177 (69%), Positives = 137/177 (78%), Gaps = 1/177 (0%)
Query 1 MTRLIPGCTLVGLMLTLLPAPTSAAGSNTATTLFPVDEVTQLETHTFLDC-HPNGSCDFV 59
M RL+ G +V + LLPA AA SNTATTLFP+D QLET L+C +G CDF
Sbjct 4 MMRLVSGFAVVAALPMLLPAGVCAAASNTATTLFPLDGPNQLETRVILNCFKSDGHCDFT 63
Query 60 AGANLRTPDGPTGFPPGLWARQTTEIRSTNRLAYLDAHATSQFERVMKAGGSDVITTVYF 119
AGA++ TPDG TGFPPGLWARQTTEIRS+NRLAYLDAHA Q+ERV K+ GSD ITT+Y
Sbjct 64 AGADMLTPDGVTGFPPGLWARQTTEIRSSNRLAYLDAHADGQYERVHKSMGSDEITTIYM 123
Query 120 GEGPPDKYQTTGVIDSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANFS 176
GEGPP+KYQT G IDST+W TGQP TD NVI CTH+QVVY GVN+TSPSTCAQ FS
Sbjct 124 GEGPPEKYQTNGRIDSTDWQTGQPKTDNNVIACTHIQVVYSGVNITSPSTCAQTTFS 180
>gi|118467177|ref|YP_879869.1| hypothetical protein MAV_0589 [Mycobacterium avium 104]
gi|118168464|gb|ABK69361.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=177
Score = 240 bits (612), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 117/177 (67%), Positives = 135/177 (77%), Gaps = 1/177 (0%)
Query 1 MTRLIPGCTLVGLMLTLLPAPTSAAGSNTATTLFPVDEVTQLETHTFLDC-HPNGSCDFV 59
M RL+ G + + LPA AA SNTATTLFP+D QLET L+C +G CDF
Sbjct 1 MMRLVSGFAVAAALPMFLPAGVCAAASNTATTLFPLDGPNQLETRALLNCFKSDGHCDFT 60
Query 60 AGANLRTPDGPTGFPPGLWARQTTEIRSTNRLAYLDAHATSQFERVMKAGGSDVITTVYF 119
AGA++ TPDG TGFPPGLWARQT+EIRS+NRLAYLDAHA Q+ERV K+ GSD ITT+Y
Sbjct 61 AGADMLTPDGVTGFPPGLWARQTSEIRSSNRLAYLDAHADGQYERVHKSMGSDEITTIYM 120
Query 120 GEGPPDKYQTTGVIDSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANFS 176
GEGPPDKY+T G IDST+W TGQP TD NVI+CTH+QVVY GVN+TSPSTCA FS
Sbjct 121 GEGPPDKYETHGRIDSTDWQTGQPKTDNNVILCTHIQVVYSGVNITSPSTCAVTTFS 177
>gi|41406593|ref|NP_959429.1| hypothetical protein MAP0495c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394942|gb|AAS02812.1| hypothetical protein MAP_0495c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=186
Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/177 (66%), Positives = 134/177 (76%), Gaps = 1/177 (0%)
Query 1 MTRLIPGCTLVGLMLTLLPAPTSAAGSNTATTLFPVDEVTQLETHTFLDC-HPNGSCDFV 59
M RL+ G + + LPA AA SNTATTLFP+D QLET L+C +G CDF
Sbjct 10 MMRLVSGFAVAAALPMFLPAGVCAAASNTATTLFPLDGPNQLETRALLNCFKSDGHCDFT 69
Query 60 AGANLRTPDGPTGFPPGLWARQTTEIRSTNRLAYLDAHATSQFERVMKAGGSDVITTVYF 119
AGA++ TPDG TGFPPGLWARQT+EIRS+NRLAYLDAHA Q+ERV K+ GSD ITT+Y
Sbjct 70 AGADMLTPDGVTGFPPGLWARQTSEIRSSNRLAYLDAHADGQYERVHKSMGSDEITTIYM 129
Query 120 GEGPPDKYQTTGVIDSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANFS 176
GEGPPDKY+ G IDST+W TGQP TD NVI+CTH+QVVY GVN+TSPSTCA FS
Sbjct 130 GEGPPDKYEAHGRIDSTDWQTGQPKTDNNVILCTHIQVVYSGVNITSPSTCAVTTFS 186
>gi|254773546|ref|ZP_05215062.1| hypothetical protein MaviaA2_02565 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=176
Score = 238 bits (606), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/175 (67%), Positives = 134/175 (77%), Gaps = 1/175 (0%)
Query 3 RLIPGCTLVGLMLTLLPAPTSAAGSNTATTLFPVDEVTQLETHTFLDC-HPNGSCDFVAG 61
RL+ G + + LPA AA SNTATTLFP+D QLET L+C +G CDF AG
Sbjct 2 RLVSGFAVAAALPMFLPAGVCAAASNTATTLFPLDGPNQLETRALLNCFKSDGHCDFTAG 61
Query 62 ANLRTPDGPTGFPPGLWARQTTEIRSTNRLAYLDAHATSQFERVMKAGGSDVITTVYFGE 121
A++ TPDG TGFPPGLWARQT+EIRS+NRLAYLDAHA Q+ERV K+ GSD ITT+Y GE
Sbjct 62 ADMLTPDGVTGFPPGLWARQTSEIRSSNRLAYLDAHADGQYERVHKSMGSDEITTIYMGE 121
Query 122 GPPDKYQTTGVIDSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANFS 176
GPPDKY+T G IDST+W TGQP TD NVI+CTH+QVVY GVN+TSPSTCA FS
Sbjct 122 GPPDKYETHGRIDSTDWQTGQPKTDNNVILCTHIQVVYSGVNITSPSTCAVTTFS 176
>gi|342862404|ref|ZP_08719044.1| hypothetical protein MCOL_26053 [Mycobacterium colombiense CECT
3035]
gi|342130075|gb|EGT83409.1| hypothetical protein MCOL_26053 [Mycobacterium colombiense CECT
3035]
Length=176
Score = 236 bits (603), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 117/175 (67%), Positives = 134/175 (77%), Gaps = 1/175 (0%)
Query 3 RLIPGCTLVGLMLTLLPAPTSAAGSNTATTLFPVDEVTQLETHTFLDC-HPNGSCDFVAG 61
RL+ G V ++ LPA AA SNTATTLFP+D QLET L+C +G CDF AG
Sbjct 2 RLVWGFAGVAVLPMFLPAAVCAASSNTATTLFPLDGPNQLETRVVLNCFKADGHCDFTAG 61
Query 62 ANLRTPDGPTGFPPGLWARQTTEIRSTNRLAYLDAHATSQFERVMKAGGSDVITTVYFGE 121
A++ TP G TGFPPGLWARQTTEIRS+NRLAYLDAHA Q+ERVMK+ GSD ITT+Y GE
Sbjct 62 ADMLTPGGVTGFPPGLWARQTTEIRSSNRLAYLDAHADGQYERVMKSMGSDEITTIYMGE 121
Query 122 GPPDKYQTTGVIDSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANFS 176
GPP+KYQT G IDST+W TGQP TD NVI C+H+QVVY GVN+TSPSTCA FS
Sbjct 122 GPPEKYQTNGRIDSTDWQTGQPKTDNNVIACSHIQVVYSGVNITSPSTCAVTTFS 176
>gi|336458489|gb|EGO37462.1| hypothetical protein MAPs_12770 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=177
Score = 236 bits (603), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 115/177 (65%), Positives = 134/177 (76%), Gaps = 1/177 (0%)
Query 1 MTRLIPGCTLVGLMLTLLPAPTSAAGSNTATTLFPVDEVTQLETHTFLDC-HPNGSCDFV 59
M RL+ G + + LPA AA SNTATTLFP+D QLET L+C +G CDF
Sbjct 1 MMRLVSGFAVAAALPMFLPAGVCAAASNTATTLFPLDGPNQLETRALLNCFKSDGHCDFT 60
Query 60 AGANLRTPDGPTGFPPGLWARQTTEIRSTNRLAYLDAHATSQFERVMKAGGSDVITTVYF 119
AGA++ TPDG TGFPPGLWARQT+EIRS+NRLAYLDAHA Q+E+V K+ GSD ITT+Y
Sbjct 61 AGADMLTPDGVTGFPPGLWARQTSEIRSSNRLAYLDAHADGQYEQVHKSMGSDEITTIYM 120
Query 120 GEGPPDKYQTTGVIDSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANFS 176
GEGPPDKY+ G IDST+W TGQP TD NVI+CTH+QVVY GVN+TSPSTCA FS
Sbjct 121 GEGPPDKYEAHGRIDSTDWQTGQPKTDNNVILCTHIQVVYSGVNITSPSTCAVTTFS 177
>gi|333992496|ref|YP_004525110.1| hypothetical protein JDM601_3857 [Mycobacterium sp. JDM601]
gi|333488465|gb|AEF37857.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=185
Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/185 (53%), Positives = 121/185 (66%), Gaps = 10/185 (5%)
Query 1 MTRLIPGCTLVGLMLTLLPAPTSAAGSNTATTLFPVDEVTQLETHTFLDCHPNGSCDFVA 60
M RL+ V L+ L+P SAA S+T T+L PV+E QL+TH+++DC C F
Sbjct 1 MKRLLMVPAAVTLLAALIPPAISAAASDTKTSLMPVNEFDQLQTHSWVDCAAPPLCRFTV 60
Query 61 GANLRTPDGPTGFPPGLWARQTTEIRSTNRLAYLDAH---ATSQFE-------RVMKAGG 110
G L+TP+G GFPP LWARQ+TEIRS+ R AYLD H F+ +V K G
Sbjct 61 GVRLQTPEGLAGFPPDLWARQSTEIRSSKRTAYLDVHTDGGEGWFKDRGGPGTKVFKDGT 120
Query 111 SDVITTVYFGEGPPDKYQTTGVIDSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTC 170
VI ++Y+GEGPP+KYQT G ID +STG+P TD NVIVCTH+QV Y GVNLT+PSTC
Sbjct 121 GAVIQSMYYGEGPPEKYQTNGSIDVLEYSTGRPKTDANVIVCTHVQVTYSGVNLTTPSTC 180
Query 171 AQANF 175
AQ F
Sbjct 181 AQTVF 185
>gi|169627685|ref|YP_001701334.1| hypothetical protein MAB_0582c [Mycobacterium abscessus ATCC
19977]
gi|169239652|emb|CAM60680.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=181
Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/151 (44%), Positives = 85/151 (57%), Gaps = 2/151 (1%)
Query 28 NTATTLFPVDEVTQLETHTFLDCHP-NGSCDFVAGANLRTPDGPTGFPPGLWARQTTEIR 86
TA PVD+ QLE H DC C + A NLR P+G GFP LWARQTTE+R
Sbjct 31 KTADVSTPVDDARQLEVHATADCRKAERQCYYTATVNLRGPNGIEGFPGDLWARQTTELR 90
Query 87 STNRLAYLDAHATSQFERVMKAGGSD-VITTVYFGEGPPDKYQTTGVIDSTNWSTGQPMT 145
+++RL YL V GGS +TTVY G G P+++Q +G T+W+TGQP
Sbjct 91 TSDRLNYLWVQWADNPNTVEHNGGSTWTLTTVYIGGGTPERFQISGTTQPTDWATGQPKL 150
Query 146 DVNVIVCTHMQVVYPGVNLTSPSTCAQANFS 176
D + IVC+ ++ + G + SP CA A FS
Sbjct 151 DADYIVCSRIEANFDGRYVISPDACAVARFS 181
>gi|120406258|ref|YP_956087.1| hypothetical protein Mvan_5310 [Mycobacterium vanbaalenii PYR-1]
gi|119959076|gb|ABM16081.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=205
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/172 (39%), Positives = 94/172 (55%), Gaps = 16/172 (9%)
Query 20 APTSAAGSNTATTLFPVDEVTQLETHTFLDCHP-NGSCDFVAGANLRTPDGPTGFPPGLW 78
+P + A SNTAT+ VD TQ++ H +C P C F ANL TP+GPTGFP W
Sbjct 34 SPPATAASNTATSSIAVDPATQIQMHVTANCDPAQNRCFFNTSANLLTPNGPTGFPGDTW 93
Query 79 ARQTTEIRSTNRLAYLDA---------------HATSQFERVMKAGGSDVITTVYFGEGP 123
ARQT +RS ++ + +A + + R++K+ ++ YFG GP
Sbjct 94 ARQTVTLRSNSQDVWQEAWYSAPAGTPRELKGANHNNVLSRMLKSLRDVEVSVTYFGGGP 153
Query 124 PDKYQTTGVIDSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANF 175
+++ T G T W+TG P + IVC+ +QVVY GVNLT+PS CAQ F
Sbjct 154 IERFTTDGDSVPTEWTTGLPAKGSDFIVCSQIQVVYGGVNLTTPSACAQTTF 205
>gi|145222053|ref|YP_001132731.1| hypothetical protein Mflv_1461 [Mycobacterium gilvum PYR-GCK]
gi|315446205|ref|YP_004079084.1| hypothetical protein Mspyr1_47060 [Mycobacterium sp. Spyr1]
gi|145214539|gb|ABP43943.1| hypothetical protein Mflv_1461 [Mycobacterium gilvum PYR-GCK]
gi|315264508|gb|ADU01250.1| hypothetical protein Mspyr1_47060 [Mycobacterium sp. Spyr1]
Length=193
Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/182 (36%), Positives = 93/182 (52%), Gaps = 17/182 (9%)
Query 10 LVGLMLTLLPAPTSAAGSNTATTLFPVDEVTQLETHTFLDCHP-NGSCDFVAGANLRTPD 68
L + + L AP + A S+ + PV ++E H DC P C + ANL TP
Sbjct 12 LASMAMALTGAPGAGAASDAGVSSIPVGP-DRIEMHVSADCVPAQNRCFYRTSANLLTPG 70
Query 69 GPTGFPPGLWARQTTEIRSTNRLAYLDAHATSQ---------------FERVMKAGGSDV 113
GPTGFP WARQT +RS ++ + +A ++ R++K+
Sbjct 71 GPTGFPQDTWARQTITLRSDSQDVWQEAWYSAPAGVPRELKGANHNNVLSRMLKSLREVE 130
Query 114 ITTVYFGEGPPDKYQTTGVIDSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQA 173
++ YFG GP +++ T G T W+TG P IVC+ +QVVYPGVNLT+P+ CAQ
Sbjct 131 VSVTYFGGGPIERFTTDGDSVPTAWTTGLPAKGSRFIVCSQIQVVYPGVNLTTPTACAQP 190
Query 174 NF 175
F
Sbjct 191 IF 192
>gi|126437660|ref|YP_001073351.1| hypothetical protein Mjls_5096 [Mycobacterium sp. JLS]
gi|126237460|gb|ABO00861.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=190
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/159 (40%), Positives = 85/159 (54%), Gaps = 16/159 (10%)
Query 32 TLFPVDEVTQLETHTFLDCHPNGSCDFVAGANLRTPDGPTGFPPGLWARQTTEIRSTNRL 91
T VD T++E H +C N C F ANL TP GPTGFP W+RQT +RS +R
Sbjct 32 TSIAVDPATKIEMHVNANCVGN-RCMFDTTANLMTPGGPTGFPGDAWSRQTITLRSNDRN 90
Query 92 AYLDAHATSQF---ERVMKAGGSDVITTVY------------FGEGPPDKYQTTGVIDST 136
+ +A ++ V A ++V++ +Y FG GP ++Y+ G T
Sbjct 91 VWQEAEYSAPAGTPREVKGANHNNVLSKMYKSLRDVEISVSSFGGGPIERYRIDGASMPT 150
Query 137 NWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANF 175
W+TGQ T IVC+H+QVVY GVNLT+P CAQ F
Sbjct 151 EWATGQLATRAAFIVCSHIQVVYGGVNLTTPDACAQTTF 189
>gi|108801674|ref|YP_641871.1| hypothetical protein Mmcs_4711 [Mycobacterium sp. MCS]
gi|119870825|ref|YP_940777.1| hypothetical protein Mkms_4797 [Mycobacterium sp. KMS]
gi|108772093|gb|ABG10815.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119696914|gb|ABL93987.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=190
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/159 (40%), Positives = 85/159 (54%), Gaps = 16/159 (10%)
Query 32 TLFPVDEVTQLETHTFLDCHPNGSCDFVAGANLRTPDGPTGFPPGLWARQTTEIRSTNRL 91
T VD T++E H +C N C F ANL TP GPTGFP W+RQT +RS +R
Sbjct 32 TSIAVDPATKIEMHVNANCVGN-RCMFDTTANLMTPGGPTGFPGDAWSRQTITLRSNDRN 90
Query 92 AYLDAHATSQF---ERVMKAGGSDVITTVY------------FGEGPPDKYQTTGVIDST 136
+ +A ++ V A ++V++ +Y FG GP ++Y+ G T
Sbjct 91 VWQEAEYSAPAGTPREVKGANHNNVLSKMYKSLRDVEISVTSFGGGPIERYRIDGASMPT 150
Query 137 NWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANF 175
W+TGQ T IVC+H+QVVY GVNLT+P CAQ F
Sbjct 151 EWATGQLATRAAFIVCSHIQVVYGGVNLTTPDACAQTTF 189
>gi|118469878|ref|YP_890264.1| hypothetical protein MSMEG_6040 [Mycobacterium smegmatis str.
MC2 155]
gi|118171165|gb|ABK72061.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=191
Score = 90.5 bits (223), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/165 (34%), Positives = 76/165 (47%), Gaps = 16/165 (9%)
Query 28 NTATTLFPVDEVTQLETHTFLDCH-PNGSCDFVAGANLRTPDGPTGFPPGLWARQTTEIR 86
++ T P+D T +E H +C C F ANL PTGFP WARQT +R
Sbjct 27 DSGHTSVPIDPATAVEMHVDANCTLATSRCTFKTWANLLAGGAPTGFPGDTWARQTITLR 86
Query 87 STNRLAYLDA--HATSQFERVMKAGGSD-------------VITTVYFGEGPPDKYQTTG 131
S++R + +A A + R K D I+ YFG GP +++ G
Sbjct 87 SSDRAVWQEAFYSAPAGMPREDKGANHDNVLSALKKSLNTVEISVTYFGGGPIERFTVDG 146
Query 132 VIDSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSPSTCAQANFS 176
+W G P TD I C+ +QVV G N+T+P CAQ FS
Sbjct 147 DSTPIDWYKGHPNTDATFIACSVIQVVRGGSNVTTPPACAQTKFS 191
>gi|164660500|ref|XP_001731373.1| hypothetical protein MGL_1556 [Malassezia globosa CBS 7966]
gi|159105273|gb|EDP44159.1| hypothetical protein MGL_1556 [Malassezia globosa CBS 7966]
Length=309
Score = 35.4 bits (80), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/89 (35%), Positives = 43/89 (49%), Gaps = 13/89 (14%)
Query 41 QLETHTFLDCHPNGSCDFVAGANL----RTPDGPT-GFPPGLWARQTTEIRSTNRLAYLD 95
+L+ T L C +G CD+VA L PD PP L + T I + ++LA D
Sbjct 59 RLKMATDLLCRASGVCDYVATQLLPSGTARPDSALPSLPPEL---RHTGILACSKLAMAD 115
Query 96 AHATSQFERVMKAGGSDVITTVYFGEGPP 124
AHA + + + A G+D IT GPP
Sbjct 116 AHALAIRKLLASAVGTDQITP-----GPP 139
>gi|323371174|gb|ADX59436.1| beta-galactosidase [Coffea arabica]
Length=338
Score = 34.3 bits (77), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/107 (25%), Positives = 45/107 (43%), Gaps = 12/107 (11%)
Query 61 GANLRTPDGPTGFPPGLWARQTTEIRSTNRLAYLDAHATSQFERVMKAGGSDVITTVYFG 120
G P+ P P +W T +++ + + Y H + F R GS + T Y+
Sbjct 238 GETFVGPNSPN--KPAIWTDNWTSLKNGSFVNYYMYHGGTNFGRT----GSAFVLTSYYD 291
Query 121 EGPPDKYQTTGVIDSTNWSTGQPMTDVNVIVCTHMQVVYPGVNLTSP 167
E P D+Y G+I W + ++ ++ + Q + GV SP
Sbjct 292 EAPIDEY---GLIRQPKWGH---LKQLHSVIKSCSQTLLHGVISVSP 332
>gi|121702677|ref|XP_001269603.1| rerric reductase like transmembrane component, putative [Aspergillus
clavatus NRRL 1]
gi|119397746|gb|EAW08177.1| rerric reductase like transmembrane component, putative [Aspergillus
clavatus NRRL 1]
Length=216
Score = 34.3 bits (77), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 0/25 (0%)
Query 70 PTGFPPGLWARQTTEIRSTNRLAYL 94
PTG PGLW R+ T ++S R+ YL
Sbjct 150 PTGSSPGLWVRKATSVQSKRRVFYL 174
Lambda K H
0.317 0.132 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 149040830208
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40