BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3573c Length=711 Score E Sequences producing significant alignments: (Bits) Value gi|15610709|ref|NP_218090.1| acyl-CoA dehydrogenase FADE34 [Myco... 1403 0.0 gi|289441003|ref|ZP_06430747.1| acyl-CoA dehydrogenase fadE34 [M... 1400 0.0 gi|323717767|gb|EGB26965.1| acyl-CoA dehydrogenase fadE34 [Mycob... 1399 0.0 gi|289572226|ref|ZP_06452453.1| acyl-CoA dehydrogenase fadE34 [M... 1399 0.0 gi|15843186|ref|NP_338223.1| acyl-CoA dehydrogenase, putative [M... 1397 0.0 gi|118619323|ref|YP_907655.1| acyl-CoA dehydrogenase FadE34 [Myc... 1081 0.0 gi|254822725|ref|ZP_05227726.1| FadE34 [Mycobacterium intracellu... 1069 0.0 gi|296166622|ref|ZP_06849050.1| probable acyl-CoA dehydrogenase ... 1063 0.0 gi|254773544|ref|ZP_05215060.1| putative acyl-CoA dehydrogenase ... 1061 0.0 gi|118465843|ref|YP_879866.1| acyl-CoA dehydrogenase [Mycobacter... 1061 0.0 gi|41406590|ref|NP_959426.1| FadE34 [Mycobacterium avium subsp. ... 1059 0.0 gi|183985036|ref|YP_001853327.1| acyl-CoA dehydrogenase FadE34 [... 1057 0.0 gi|240169805|ref|ZP_04748464.1| FadE34 [Mycobacterium kansasii A... 1033 0.0 gi|342862405|ref|ZP_08719045.1| acyl-CoA dehydrogenase [Mycobact... 1031 0.0 gi|333992505|ref|YP_004525119.1| acyl-CoA dehydrogenase [Mycobac... 956 0.0 gi|108801675|ref|YP_641872.1| acyl-CoA dehydrogenase-like protei... 954 0.0 gi|126437661|ref|YP_001073352.1| acyl-CoA dehydrogenase domain-c... 951 0.0 gi|118473968|ref|YP_890265.1| acyl-CoA dehydrogenase [Mycobacter... 928 0.0 gi|120406259|ref|YP_956088.1| acyl-CoA dehydrogenase domain-cont... 925 0.0 gi|145222052|ref|YP_001132730.1| acyl-CoA dehydrogenase domain-c... 902 0.0 gi|315446206|ref|YP_004079085.1| acyl-CoA dehydrogenase [Mycobac... 900 0.0 gi|169627683|ref|YP_001701332.1| acyl-CoA dehydrogenase FadE [My... 801 0.0 gi|111021455|ref|YP_704427.1| acyl-CoA dehydrogenase [Rhodococcu... 729 0.0 gi|226363821|ref|YP_002781603.1| acyl-CoA dehydrogenase [Rhodoco... 707 0.0 gi|325674979|ref|ZP_08154666.1| acyl-CoA dehydrogenase [Rhodococ... 686 0.0 gi|226304196|ref|YP_002764154.1| hypothetical protein RER_07070 ... 683 0.0 gi|229494368|ref|ZP_04388131.1| putative acyl-CoA dehydrogenase ... 680 0.0 gi|312138117|ref|YP_004005453.1| acyl-CoA dehydrogenase [Rhodoco... 661 0.0 gi|54022412|ref|YP_116654.1| putative acyl-CoA dehydrogenase [No... 608 7e-172 gi|300784408|ref|YP_003764699.1| acyl-CoA dehydrogenase [Amycola... 600 2e-169 gi|319948639|ref|ZP_08022763.1| acyl-CoA dehydrogenase [Dietzia ... 596 6e-168 gi|302525633|ref|ZP_07277975.1| FadE34 [Streptomyces sp. AA4] >g... 587 3e-165 gi|343925842|ref|ZP_08765357.1| hypothetical protein GOALK_050_0... 575 7e-162 gi|111022779|ref|YP_705751.1| acyl-CoA dehydrogenase [Rhodococcu... 575 1e-161 gi|269126411|ref|YP_003299781.1| acyl-CoA dehydrogenase domain-c... 570 3e-160 gi|333918573|ref|YP_004492154.1| putative acyl-CoA dehydrogenase... 570 3e-160 gi|226308589|ref|YP_002768549.1| hypothetical protein RER_51020 ... 568 1e-159 gi|325673067|ref|ZP_08152761.1| acyl-CoA dehydrogenase [Rhodococ... 566 5e-159 gi|226365287|ref|YP_002783070.1| acyl-CoA dehydrogenase [Rhodoco... 566 5e-159 gi|145595149|ref|YP_001159446.1| acyl-CoA dehydrogenase domain-c... 563 3e-158 gi|229488767|ref|ZP_04382633.1| putative acyl-CoA dehydrogenase ... 562 7e-158 gi|312141674|ref|YP_004009010.1| acyl-CoA dehydrogenase [Rhodoco... 561 1e-157 gi|262200880|ref|YP_003272088.1| acyl-CoA dehydrogenase domain-c... 561 1e-157 gi|326384609|ref|ZP_08206288.1| acyl-CoA dehydrogenase domain-co... 560 3e-157 gi|119717019|ref|YP_923984.1| acyl-CoA dehydrogenase domain-cont... 546 5e-153 gi|296141471|ref|YP_003648714.1| acyl-CoA dehydrogenase domain-c... 545 1e-152 gi|159038395|ref|YP_001537648.1| acyl-CoA dehydrogenase domain-c... 543 4e-152 gi|269128195|ref|YP_003301565.1| acyl-CoA dehydrogenase domain-c... 532 9e-149 gi|289571815|ref|ZP_06452042.1| acyl-CoA dehydrogenase fadE34 [M... 521 1e-145 gi|296268786|ref|YP_003651418.1| acyl-CoA dehydrogenase domain-c... 520 4e-145 >gi|15610709|ref|NP_218090.1| acyl-CoA dehydrogenase FADE34 [Mycobacterium tuberculosis H37Rv] gi|31794750|ref|NP_857243.1| acyl-CoA dehydrogenase FADE34 [Mycobacterium bovis AF2122/97] gi|121639493|ref|YP_979717.1| putative acyl-CoA dehydrogenase fadE34 [Mycobacterium bovis BCG str. Pasteur 1173P2] 69 more sequence titles Length=711 Score = 1403 bits (3632), Expect = 0.0, Method: Compositional matrix adjust. Identities = 710/711 (99%), Positives = 711/711 (100%), Gaps = 0/711 (0%) Query 1 VVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 +VATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL Sbjct 1 MVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 Query 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF 120 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF Sbjct 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF 120 Query 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT Sbjct 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 Query 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG Sbjct 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 Query 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN 300 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN Sbjct 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN 300 Query 301 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA 360 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA Sbjct 301 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA 360 Query 361 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA 420 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA Sbjct 361 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA 420 Query 421 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK 480 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK Sbjct 421 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK 480 Query 481 AVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR 540 AVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR Sbjct 481 AVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR 540 Query 541 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK 600 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK Sbjct 541 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK 600 Query 601 VLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQAL 660 VLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQAL Sbjct 601 VLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQAL 660 Query 661 AEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 AEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR Sbjct 661 AEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 >gi|289441003|ref|ZP_06430747.1| acyl-CoA dehydrogenase fadE34 [Mycobacterium tuberculosis T46] gi|289752287|ref|ZP_06511665.1| acyl-CoA dehydrogenase fadE34 [Mycobacterium tuberculosis T92] gi|289413922|gb|EFD11162.1| acyl-CoA dehydrogenase fadE34 [Mycobacterium tuberculosis T46] gi|289692874|gb|EFD60303.1| acyl-CoA dehydrogenase fadE34 [Mycobacterium tuberculosis T92] Length=711 Score = 1400 bits (3623), Expect = 0.0, Method: Compositional matrix adjust. Identities = 709/711 (99%), Positives = 710/711 (99%), Gaps = 0/711 (0%) Query 1 VVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 +VATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL Sbjct 1 MVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 Query 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF 120 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF Sbjct 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF 120 Query 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT Sbjct 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 Query 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG Sbjct 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 Query 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN 300 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN Sbjct 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN 300 Query 301 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA 360 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA Sbjct 301 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA 360 Query 361 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA 420 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA Sbjct 361 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA 420 Query 421 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK 480 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK Sbjct 421 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK 480 Query 481 AVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR 540 AVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR Sbjct 481 AVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR 540 Query 541 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK 600 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK Sbjct 541 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK 600 Query 601 VLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQAL 660 VLGDMELDVAQQ RLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQAL Sbjct 601 VLGDMELDVAQQYRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQAL 660 Query 661 AEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 AEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR Sbjct 661 AEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 >gi|323717767|gb|EGB26965.1| acyl-CoA dehydrogenase fadE34 [Mycobacterium tuberculosis CDC1551A] Length=711 Score = 1399 bits (3622), Expect = 0.0, Method: Compositional matrix adjust. Identities = 709/711 (99%), Positives = 710/711 (99%), Gaps = 0/711 (0%) Query 1 VVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 +VATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL Sbjct 1 MVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 Query 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF 120 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF Sbjct 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF 120 Query 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT Sbjct 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 Query 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG Sbjct 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 Query 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN 300 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN Sbjct 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN 300 Query 301 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA 360 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA Sbjct 301 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA 360 Query 361 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA 420 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA Sbjct 361 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA 420 Query 421 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK 480 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK Sbjct 421 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK 480 Query 481 AVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR 540 AVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR Sbjct 481 AVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR 540 Query 541 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK 600 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK Sbjct 541 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK 600 Query 601 VLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQAL 660 VLGDMELDVAQQDRLGRLILLAQAGALLD RIAELAVGGQDPGAQSSVRKLIGVRYRQAL Sbjct 601 VLGDMELDVAQQDRLGRLILLAQAGALLDWRIAELAVGGQDPGAQSSVRKLIGVRYRQAL 660 Query 661 AEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 AEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR Sbjct 661 AEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 >gi|289572226|ref|ZP_06452453.1| acyl-CoA dehydrogenase fadE34 [Mycobacterium tuberculosis K85] gi|289536657|gb|EFD41235.1| acyl-CoA dehydrogenase fadE34 [Mycobacterium tuberculosis K85] Length=711 Score = 1399 bits (3622), Expect = 0.0, Method: Compositional matrix adjust. Identities = 709/711 (99%), Positives = 710/711 (99%), Gaps = 0/711 (0%) Query 1 VVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 +VATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL Sbjct 1 MVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 Query 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF 120 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF Sbjct 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF 120 Query 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT Sbjct 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 Query 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG Sbjct 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 Query 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN 300 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN Sbjct 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN 300 Query 301 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA 360 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA Sbjct 301 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA 360 Query 361 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA 420 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA Sbjct 361 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA 420 Query 421 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK 480 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK Sbjct 421 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK 480 Query 481 AVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR 540 AVRADGGWLLTGQKVWTSAAHKA WGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR Sbjct 481 AVRADGGWLLTGQKVWTSAAHKAWWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR 540 Query 541 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK 600 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK Sbjct 541 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK 600 Query 601 VLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQAL 660 VLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQAL Sbjct 601 VLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQAL 660 Query 661 AEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 AEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR Sbjct 661 AEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 >gi|15843186|ref|NP_338223.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis CDC1551] gi|13883539|gb|AAK48037.1| acyl-CoA dehydrogenase, putative [Mycobacterium tuberculosis CDC1551] Length=711 Score = 1397 bits (3616), Expect = 0.0, Method: Compositional matrix adjust. Identities = 708/711 (99%), Positives = 709/711 (99%), Gaps = 0/711 (0%) Query 1 VVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 +VATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL Sbjct 1 MVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 Query 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF 120 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF Sbjct 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF 120 Query 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT Sbjct 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 Query 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG Sbjct 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 Query 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN 300 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN Sbjct 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN 300 Query 301 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA 360 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA Sbjct 301 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA 360 Query 361 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA 420 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA Sbjct 361 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA 420 Query 421 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK 480 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK Sbjct 421 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK 480 Query 481 AVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR 540 AVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR Sbjct 481 AVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR 540 Query 541 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK 600 EITGDSLFNEVFLDNV VPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK Sbjct 541 EITGDSLFNEVFLDNVIVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK 600 Query 601 VLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQAL 660 VLGDMELDVAQQDRLGRLILLAQAGALLD RIAELAVGGQDPGAQSSVRKLIGVRYRQAL Sbjct 601 VLGDMELDVAQQDRLGRLILLAQAGALLDWRIAELAVGGQDPGAQSSVRKLIGVRYRQAL 660 Query 661 AEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 AEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR Sbjct 661 AEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 >gi|118619323|ref|YP_907655.1| acyl-CoA dehydrogenase FadE34 [Mycobacterium ulcerans Agy99] gi|118571433|gb|ABL06184.1| acyl-CoA dehydrogenase FadE34 [Mycobacterium ulcerans Agy99] Length=711 Score = 1081 bits (2795), Expect = 0.0, Method: Compositional matrix adjust. Identities = 578/715 (81%), Positives = 634/715 (89%), Gaps = 8/715 (1%) Query 1 VVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 +VA V+D+Q AARELVR WARTAA+G TAA R++E GNADAWRPVF GLA LGL Sbjct 1 MVAIVSDQQLAARELVRDWARTAAAGEIPTAASREIE----RGNADAWRPVFTGLAELGL 56 Query 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSD----PKLRSALAS 116 FGVAVPED GGAGG IEDLCAM++EAA+ALVPGPVA+TAVAT V+++ P+L +ALAS Sbjct 57 FGVAVPEDHGGAGGIIEDLCAMIEEAAKALVPGPVASTAVATAVLAEAGAEPQLLAALAS 116 Query 117 GERFAGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEP 176 G+RFAG+A++G +Q D TS ASG+ VLG GGVVLLPA +WLLVDT + V VEP Sbjct 117 GDRFAGLALEGELQFDQNTSLASGSAPLVLGAIAGGVVLLPAGASWLLVDTTAEGVAVEP 176 Query 177 LRATDFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVR 236 L ATDFS PLAR+VL +AP L G+RVEDL ATVLAAEAAGV RW L+TAVAYAKVR Sbjct 177 LAATDFSRPLARVVLAAAPALSLGELGQRVEDLTATVLAAEAAGVTRWALETAVAYAKVR 236 Query 237 EQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDA 296 EQFGKPIGSFQA+KHLCA+MLCRAEQADVAAADAARAAA+SD Q ++AAA+AASIGI A Sbjct 237 EQFGKPIGSFQAIKHLCAEMLCRAEQADVAAADAARAAAESDDQQFALAAALAASIGISA 296 Query 297 AKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLG 356 AKAN KDCIQVLGGIGCTWEHDAHLYLRRAH IG FLGG+ RWLRRV ALTQAGVRRRL Sbjct 297 AKANVKDCIQVLGGIGCTWEHDAHLYLRRAHSIGRFLGGAERWLRRVAALTQAGVRRRLD 356 Query 357 VDLAEVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQ 416 +DL+EVA LRPEI AAVA+VAALPE+KRQ ALA+ GLLAPHWPAPYGRGASPAEQLLIDQ Sbjct 357 IDLSEVADLRPEIVAAVADVAALPEQKRQEALAEAGLLAPHWPAPYGRGASPAEQLLIDQ 416 Query 417 ELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLAS 476 ELAAA V RPDLVIGWWAAPTILEHGTPEQI RFVP+T+RG+FLWCQLFSEPGAGSDLAS Sbjct 417 ELAAAGVVRPDLVIGWWAAPTILEHGTPEQIARFVPSTLRGDFLWCQLFSEPGAGSDLAS 476 Query 477 LRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEI 536 LRTKAVR DGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFL+DMT PGIEI Sbjct 477 LRTKAVRGDGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLLDMTAPGIEI 536 Query 537 RPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPME 596 RPLREITGDSLFNEVFL+NVF+PD+MVVGAVNDGWRLARTTLANERVAMATGTALGNPME Sbjct 537 RPLREITGDSLFNEVFLENVFIPDQMVVGAVNDGWRLARTTLANERVAMATGTALGNPME 596 Query 597 ELLKVLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRY 656 ELL+VL + ELD QQDRL RLI+ Q GALLD+RIA+L +GG+DPGAQSSVRKLIGVRY Sbjct 597 ELLEVLAEPELDTGQQDRLARLIVATQTGALLDQRIAQLVMGGRDPGAQSSVRKLIGVRY 656 Query 657 RQALAEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 RQALAEY+M+VS GGLVENRAV+DFLNTRCLTIAGGTEQILLTVAAERLLGLPR Sbjct 657 RQALAEYMMDVSACGGLVENRAVFDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 >gi|254822725|ref|ZP_05227726.1| FadE34 [Mycobacterium intracellulare ATCC 13950] Length=712 Score = 1069 bits (2765), Expect = 0.0, Method: Compositional matrix adjust. Identities = 571/716 (80%), Positives = 628/716 (88%), Gaps = 9/716 (1%) Query 1 VVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 +VATVTDEQ AAR LVR WAR A SG TAA+R++E +G DAWRPVF+ LA LG+ Sbjct 1 MVATVTDEQFAARALVRDWARNATSGPGGTAAIREVE----QGKPDAWRPVFSRLAELGI 56 Query 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF 120 FGVA+PE+ GGAGGSIEDLCAMV+EAA+ALVPGPVATTA+ATLVV+DP L ALA+GERF Sbjct 57 FGVAIPEESGGAGGSIEDLCAMVEEAAKALVPGPVATTALATLVVTDPGLLEALAAGERF 116 Query 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 AG+A++G V++D TSTASGT+ LG A GV+L PADG WLL+D A + V VEPL+AT Sbjct 117 AGLALEGDVRLDGATSTASGTLPFALGAADDGVLLAPADGKWLLIDAAGEGVRVEPLQAT 176 Query 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 DFS PLAR+VL+SAP TVL +G RVE+LAATVLAAEAAG+ RW L+TAV YAKVREQFG Sbjct 177 DFSRPLARVVLSSAPATVLSETGTRVEELAATVLAAEAAGITRWALETAVDYAKVREQFG 236 Query 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN 300 KPIGSFQA+KHLCA+MLCRAEQA+VAA+DAARAAAD D +Q SIAAA+AAS I KAN Sbjct 237 KPIGSFQAIKHLCAEMLCRAEQAEVAASDAARAAADGDASQFSIAAALAASTCITTVKAN 296 Query 301 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA 360 KDCIQVLGGIGCTWEHDAHLYLRRAH IG FLGG RW RR+TALTQ GVRR+LG+DL Sbjct 297 VKDCIQVLGGIGCTWEHDAHLYLRRAHAIGRFLGGPERWQRRITALTQDGVRRQLGIDLT 356 Query 361 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA 420 EV G R EIAAAVAE+A LP EKRQV LA+ GL APHWP PYGR ASPAEQLLIDQELAA Sbjct 357 EVEGRRSEIAAAVAEIAELPAEKRQVGLAEAGLQAPHWPKPYGRAASPAEQLLIDQELAA 416 Query 421 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK 480 A VERPDLVIGWWAAPTILEHGTPEQIE+FVP T+RGEFLWCQLFSEPGAGSDLASLRTK Sbjct 417 AGVERPDLVIGWWAAPTILEHGTPEQIEQFVPGTLRGEFLWCQLFSEPGAGSDLASLRTK 476 Query 481 AVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR 540 AVR DGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDM +PGI+IRPLR Sbjct 477 AVRGDGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMKSPGIDIRPLR 536 Query 541 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK 600 EITGDSLFNEVFLDNVFVPDEMVVG VNDGWRLARTTLANERVAMA GTALGNPMEELL Sbjct 537 EITGDSLFNEVFLDNVFVPDEMVVGEVNDGWRLARTTLANERVAMANGTALGNPMEELLT 596 Query 601 VLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQAL 660 +L ELDVA+QDRL RLI+LAQ GALLD+RIA+LAVGGQDPGAQSSVRKLIGVRYRQAL Sbjct 597 LLAARELDVAEQDRLARLIILAQTGALLDQRIAQLAVGGQDPGAQSSVRKLIGVRYRQAL 656 Query 661 AEYLMEVSDGGGLVE-----NRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 AE+ M+ ++GGGLV+ +RAV+DFLNTRCLTIAGGTEQILLTVAAERLLGLPR Sbjct 657 AEFTMDAAEGGGLVDRRADGDRAVFDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 712 >gi|296166622|ref|ZP_06849050.1| probable acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898025|gb|EFG77603.1| probable acyl-CoA dehydrogenase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=706 Score = 1063 bits (2748), Expect = 0.0, Method: Compositional matrix adjust. Identities = 583/711 (82%), Positives = 636/711 (90%), Gaps = 5/711 (0%) Query 1 VVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 +VATVTDEQ AAR LVR WAR A SG TAA+R E+G+ADAWRPVFA LA LG+ Sbjct 1 MVATVTDEQFAARALVRDWARNATSGPGGTAAIR----AVEQGDADAWRPVFARLAELGI 56 Query 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF 120 FGVA+PE+ GGAGG++EDLCAMV+EAA+ALVPGPVATTA+ATLVV+DP L +ALA+GERF Sbjct 57 FGVAIPEEHGGAGGTVEDLCAMVEEAAKALVPGPVATTALATLVVTDPDLAAALAAGERF 116 Query 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 AG+A++G V+ D +TS ASG V LG A GG++LLPA G WLLVD A V +EPL AT Sbjct 117 AGLALEGDVRFDAETSRASGAVPLALGAADGGILLLPAAGQWLLVDAASPGVRIEPLEAT 176 Query 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 DFS PLAR+ LTSAP +V+E S ERVE+LAATVLAAEAAGV RW+LDTAV YAKVREQFG Sbjct 177 DFSRPLARVELTSAPASVVE-SPERVEELAATVLAAEAAGVTRWSLDTAVDYAKVREQFG 235 Query 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN 300 KPIGSFQAVKHLCA+MLCRAEQA+VAAADAARAAADSD QLSIAAA+AA IGI AAKAN Sbjct 236 KPIGSFQAVKHLCAEMLCRAEQAEVAAADAARAAADSDAGQLSIAAALAAGIGIAAAKAN 295 Query 301 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA 360 KDCIQVLGGIGCTWEHDAHLYLRRAH IG FLGG+ RWLRR+T LTQ+GVRRRLG+DL Sbjct 296 VKDCIQVLGGIGCTWEHDAHLYLRRAHAIGRFLGGAERWLRRITELTQSGVRRRLGIDLT 355 Query 361 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA 420 +V R ++AA VAE+AALPE KRQ ALA+ GL APHWPAP+GRGASPAEQLLIDQELAA Sbjct 356 DVEDQRADLAATVAEIAALPEGKRQAALAEAGLQAPHWPAPHGRGASPAEQLLIDQELAA 415 Query 421 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK 480 A V RPDLVIGWWAAPTILEHGTPEQIERFVP T+RGEFLWCQLFSEPGAGSDLASLRTK Sbjct 416 AGVARPDLVIGWWAAPTILEHGTPEQIERFVPGTLRGEFLWCQLFSEPGAGSDLASLRTK 475 Query 481 AVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR 540 AVR DGGWLLTGQKVWTSAAHKARWGVCLARTDP+APKHKGITYFLVDM PGIEIRPLR Sbjct 476 AVRGDGGWLLTGQKVWTSAAHKARWGVCLARTDPEAPKHKGITYFLVDMKAPGIEIRPLR 535 Query 541 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK 600 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANER+AMATGTALGNPMEELLK Sbjct 536 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERIAMATGTALGNPMEELLK 595 Query 601 VLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQAL 660 VL +++LD AQQDRLGRLI +AQ GALLD+RIA+LAVGGQDPGAQSSVRKLIGVRYRQAL Sbjct 596 VLAELDLDAAQQDRLGRLIAIAQTGALLDQRIAQLAVGGQDPGAQSSVRKLIGVRYRQAL 655 Query 661 AEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 AEY+M+VS+GGGLV N AVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR Sbjct 656 AEYMMDVSEGGGLVRNHAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 706 >gi|254773544|ref|ZP_05215060.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium ATCC 25291] Length=723 Score = 1061 bits (2745), Expect = 0.0, Method: Compositional matrix adjust. Identities = 579/711 (82%), Positives = 633/711 (90%), Gaps = 4/711 (0%) Query 1 VVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 VVATVTDEQ AAR LVR WAR A++G TAA+RD+E +GN DAWRPVFA LA LG+ Sbjct 17 VVATVTDEQFAARALVRDWARNASTGPGGTAAIRDVE----QGNPDAWRPVFARLAELGI 72 Query 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF 120 FGVAVPE+ GGAGGS+EDLCAMV+EAA+AL+PGPVATTA+ATLV+SD +L +ALA+GERF Sbjct 73 FGVAVPEEAGGAGGSVEDLCAMVEEAAKALIPGPVATTALATLVLSDAELLAALAAGERF 132 Query 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 AG+A+ G + D STASGT+ VLG A GGV+LLPADG WL+VDTA D V +EPL AT Sbjct 133 AGLALQGDITFDGAASTASGTLPFVLGAADGGVLLLPADGRWLVVDTASDGVHIEPLAAT 192 Query 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 DFS PLAR+VL SAP TVL + ERVE+LAATVLAAEAAG+ RW+L TAV YAKVREQFG Sbjct 193 DFSRPLARVVLDSAPATVLAQTPERVEELAATVLAAEAAGITRWSLQTAVDYAKVREQFG 252 Query 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN 300 KPIGSFQA+KHLCA+MLCRAEQA+VAAADAARAAA+ D Q S+AAA+AA+ I A KAN Sbjct 253 KPIGSFQAIKHLCAEMLCRAEQAEVAAADAARAAAEDDPAQFSLAAALAAATAITAVKAN 312 Query 301 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA 360 KDCIQVLGGIGCTWEHDAHLYLRRAH IG FLGG+ RWLRR+TALTQAGVRRRLG+DL Sbjct 313 VKDCIQVLGGIGCTWEHDAHLYLRRAHAIGRFLGGAERWLRRITALTQAGVRRRLGIDLT 372 Query 361 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA 420 EV RP+IA AVA +AALP E+RQ ALA+ GL APHWPAPYGRGASPAEQLLIDQELAA Sbjct 373 EVEDQRPQIAEAVARIAALPAEQRQAALAEAGLQAPHWPAPYGRGASPAEQLLIDQELAA 432 Query 421 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK 480 A V RPDLVIGWWAAPTILEHGTPEQIERFVP T+RGEFLWCQLFSEPGAGSDLASLRTK Sbjct 433 AGVARPDLVIGWWAAPTILEHGTPEQIERFVPGTLRGEFLWCQLFSEPGAGSDLASLRTK 492 Query 481 AVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR 540 AVR DGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDM+ PGIEIRPLR Sbjct 493 AVRTDGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMSAPGIEIRPLR 552 Query 541 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK 600 EITGDSLFNEVFLDNVF+PDEMVVG VNDGWRLARTTLANERVAMA+GTALGNPMEELL+ Sbjct 553 EITGDSLFNEVFLDNVFIPDEMVVGEVNDGWRLARTTLANERVAMASGTALGNPMEELLE 612 Query 601 VLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQAL 660 +L + LD AQQDRLGRLI+ AQ GALLD+RIA+LAVGGQDPGAQSSVRKLIGVRYRQAL Sbjct 613 LLSTLPLDSAQQDRLGRLIVTAQTGALLDQRIAQLAVGGQDPGAQSSVRKLIGVRYRQAL 672 Query 661 AEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 AEY M+VS+GGGLV NRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR Sbjct 673 AEYTMDVSEGGGLVHNRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 723 >gi|118465843|ref|YP_879866.1| acyl-CoA dehydrogenase [Mycobacterium avium 104] gi|118167130|gb|ABK68027.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104] Length=707 Score = 1061 bits (2743), Expect = 0.0, Method: Compositional matrix adjust. Identities = 579/711 (82%), Positives = 633/711 (90%), Gaps = 4/711 (0%) Query 1 VVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 +VATVTDEQ AAR LVR WAR A++G TAA+RD+E +GN DAWRPVFA LA LG+ Sbjct 1 MVATVTDEQFAARALVRDWARNASTGPGGTAAIRDVE----QGNPDAWRPVFARLAELGI 56 Query 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF 120 FGVAVPE+ GGAGGS+EDLCAMV+EAA+AL+PGPVATTA+ATLV+SD +L +ALA+GERF Sbjct 57 FGVAVPEEAGGAGGSVEDLCAMVEEAAKALIPGPVATTALATLVLSDAELLAALAAGERF 116 Query 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 AG+A+ G + D STASGT+ VLG A GGV+LLPADG WL+VDTA D V +EPL AT Sbjct 117 AGLALQGDITFDGAASTASGTLPFVLGAADGGVLLLPADGRWLVVDTASDGVHIEPLAAT 176 Query 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 DFS PLAR+VL SAP TVL + ERVE+LAATVLAAEAAG+ RW+L TAV YAKVREQFG Sbjct 177 DFSRPLARVVLDSAPATVLAQTPERVEELAATVLAAEAAGITRWSLQTAVDYAKVREQFG 236 Query 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN 300 KPIGSFQA+KHLCA+MLCRAEQA+VAAADAARAAA+ D Q S+AAA+AA+ I A KAN Sbjct 237 KPIGSFQAIKHLCAEMLCRAEQAEVAAADAARAAAEDDPAQFSLAAALAAATAITAVKAN 296 Query 301 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA 360 KDCIQVLGGIGCTWEHDAHLYLRRAH IG FLGG+ RWLRR+TALTQAGVRRRLG+DL Sbjct 297 VKDCIQVLGGIGCTWEHDAHLYLRRAHAIGRFLGGAERWLRRITALTQAGVRRRLGIDLT 356 Query 361 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA 420 EV RP+IA AVA +AALP E+RQ ALA+ GL APHWPAPYGRGASPAEQLLIDQELAA Sbjct 357 EVEDQRPQIAEAVARIAALPAEQRQAALAEAGLQAPHWPAPYGRGASPAEQLLIDQELAA 416 Query 421 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK 480 A V RPDLVIGWWAAPTILEHGTPEQIERFVP T+RGEFLWCQLFSEPGAGSDLASLRTK Sbjct 417 AGVARPDLVIGWWAAPTILEHGTPEQIERFVPGTLRGEFLWCQLFSEPGAGSDLASLRTK 476 Query 481 AVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR 540 AVR DGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDM+ PGIEIRPLR Sbjct 477 AVRTDGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMSAPGIEIRPLR 536 Query 541 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK 600 EITGDSLFNEVFLDNVFVPDEMVVG VNDGWRLARTTLANERVAMA+GTALGNPMEELL+ Sbjct 537 EITGDSLFNEVFLDNVFVPDEMVVGEVNDGWRLARTTLANERVAMASGTALGNPMEELLE 596 Query 601 VLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQAL 660 +L + LD AQQDRLGRLI+ AQ GALLD+RIA+LAVGGQDPGAQSSVRKLIGVRYRQAL Sbjct 597 LLSTLPLDSAQQDRLGRLIVTAQTGALLDQRIAQLAVGGQDPGAQSSVRKLIGVRYRQAL 656 Query 661 AEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 AEY M+VS+GGGLV NRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR Sbjct 657 AEYTMDVSEGGGLVHNRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 707 >gi|41406590|ref|NP_959426.1| FadE34 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394939|gb|AAS02809.1| FadE34 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336458486|gb|EGO37459.1| acyl-CoA dehydrogenase [Mycobacterium avium subsp. paratuberculosis S397] Length=707 Score = 1059 bits (2739), Expect = 0.0, Method: Compositional matrix adjust. Identities = 578/711 (82%), Positives = 631/711 (89%), Gaps = 4/711 (0%) Query 1 VVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 +VATVTDEQ AAR LVR WAR A++G TAA+RD+E +GN DAWRPVFA LA LG+ Sbjct 1 MVATVTDEQFAARALVRDWARNASTGPGGTAAIRDVE----QGNPDAWRPVFARLAELGI 56 Query 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF 120 FGVAVPE+ GGAGGS+EDLCAMV+EAA+AL+PGPVATTA+ATLVVSD +L +ALA+GERF Sbjct 57 FGVAVPEEAGGAGGSVEDLCAMVEEAAKALIPGPVATTALATLVVSDAELLAALAAGERF 116 Query 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 AG+A+ G + D STASGT+ LG A GGV+LLPADG WL+VDTA D V +EPL AT Sbjct 117 AGLALQGDITFDGAASTASGTLPFALGAADGGVLLLPADGRWLVVDTASDGVHIEPLAAT 176 Query 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 DFS PLAR+VL SAP TVL + ERVE+LAATVLAAEAAG+ RW+L TAV YAKVREQFG Sbjct 177 DFSRPLARVVLDSAPATVLAQTPERVEELAATVLAAEAAGITRWSLQTAVDYAKVREQFG 236 Query 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN 300 KPIGSFQA+KHLCA+MLCRAEQA+VAAADAARAAA+ D Q S+AAA+AA+ I A KAN Sbjct 237 KPIGSFQAIKHLCAEMLCRAEQAEVAAADAARAAAEDDPAQFSLAAALAAATAITAVKAN 296 Query 301 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA 360 KDCIQVLGGIGCTWEHDAHLYLRRAH IG FLGG+ RWLRR+TALTQAGVRRRLG+DL Sbjct 297 VKDCIQVLGGIGCTWEHDAHLYLRRAHAIGRFLGGAERWLRRITALTQAGVRRRLGIDLT 356 Query 361 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA 420 EV RP+I AVA +AALP E+RQ ALA+ GL APHWPAPYGRGASPAEQLLIDQELAA Sbjct 357 EVEDQRPQITEAVARIAALPAEQRQAALAEAGLQAPHWPAPYGRGASPAEQLLIDQELAA 416 Query 421 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK 480 A V RPDLVIGWWAAPTILEHGTPEQIERFVP T+RGEFLWCQLFSEPGAGSDLASLRTK Sbjct 417 AGVARPDLVIGWWAAPTILEHGTPEQIERFVPGTLRGEFLWCQLFSEPGAGSDLASLRTK 476 Query 481 AVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLR 540 AVR DGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDM+ PGIEIRPLR Sbjct 477 AVRTDGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMSAPGIEIRPLR 536 Query 541 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK 600 EITGDSLFNEVFLDNVFVPDEMVVG VNDGWRLARTTLANERVAMA+GTALGNPMEELL+ Sbjct 537 EITGDSLFNEVFLDNVFVPDEMVVGEVNDGWRLARTTLANERVAMASGTALGNPMEELLE 596 Query 601 VLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQAL 660 +L + LD AQQDRLGRLI+ AQ GALLD+RIA+LAVGGQDPGAQSSVRKLIGVRYRQAL Sbjct 597 LLSTLPLDSAQQDRLGRLIVTAQTGALLDQRIAQLAVGGQDPGAQSSVRKLIGVRYRQAL 656 Query 661 AEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 AEY M+VS+GGGLV NRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR Sbjct 657 AEYTMDVSEGGGLVHNRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 707 >gi|183985036|ref|YP_001853327.1| acyl-CoA dehydrogenase FadE34 [Mycobacterium marinum M] gi|183178362|gb|ACC43472.1| acyl-CoA dehydrogenase FadE34 [Mycobacterium marinum M] Length=711 Score = 1057 bits (2734), Expect = 0.0, Method: Compositional matrix adjust. Identities = 579/715 (81%), Positives = 637/715 (90%), Gaps = 8/715 (1%) Query 1 VVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 +VA V+D+Q AARELVR WARTAA+G TAA R++E GNADAWRPVF GLA LGL Sbjct 1 MVAIVSDQQLAARELVRDWARTAAAGEIPTAASREIE----RGNADAWRPVFTGLAELGL 56 Query 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSD----PKLRSALAS 116 FGVAVPED GGAGG+IEDLCAM++EAA+ALVPGPVA+TAVAT V+++ P+L +ALAS Sbjct 57 FGVAVPEDHGGAGGTIEDLCAMIEEAAKALVPGPVASTAVATAVLAEAGAEPQLLAALAS 116 Query 117 GERFAGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEP 176 G+RFAG+A++G +Q D TS ASG+ VLG GGVVLLPA +WLLVDT + V VEP Sbjct 117 GDRFAGLALEGELQFDQNTSLASGSAPLVLGAIAGGVVLLPAGASWLLVDTTAEGVAVEP 176 Query 177 LRATDFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVR 236 ATDFS PLAR+VL +AP L G+RVEDL ATVLAAEAAGV RW L+TAVAYAKVR Sbjct 177 SAATDFSRPLARVVLAAAPALSLGELGQRVEDLTATVLAAEAAGVTRWALETAVAYAKVR 236 Query 237 EQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDA 296 EQFGKPIGSFQA+KHLCA+MLCRAEQADVAAADAARAAA+SD Q ++AAA+AA IGI A Sbjct 237 EQFGKPIGSFQAIKHLCAEMLCRAEQADVAAADAARAAAESDDQQFALAAALAAGIGISA 296 Query 297 AKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLG 356 AKAN KDCIQVLGGIGCTWEHDAHLYLRRAH IG FLGG+ RWLRRV ALTQAGVRRRL Sbjct 297 AKANVKDCIQVLGGIGCTWEHDAHLYLRRAHSIGRFLGGAERWLRRVAALTQAGVRRRLD 356 Query 357 VDLAEVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQ 416 +DL+EVA LRPEIAAAVA+VAALPE+KRQVALA+ GLLAPHWPAPYGRGASPAEQLLIDQ Sbjct 357 IDLSEVADLRPEIAAAVADVAALPEQKRQVALAEAGLLAPHWPAPYGRGASPAEQLLIDQ 416 Query 417 ELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLAS 476 ELAAA V RPDLVIGWWAAPTILEHGTPEQI RFVP+T+RG+FLWCQLFSEPGAGSDLAS Sbjct 417 ELAAAGVVRPDLVIGWWAAPTILEHGTPEQIARFVPSTLRGDFLWCQLFSEPGAGSDLAS 476 Query 477 LRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEI 536 LRTKAVR DGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFL+DMT PGIEI Sbjct 477 LRTKAVRGDGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLLDMTAPGIEI 536 Query 537 RPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPME 596 RPLREITGDSLFNEVFL+NVF+PD+MVVGAVNDGWRLARTTLANERVAMATGTALGNPME Sbjct 537 RPLREITGDSLFNEVFLENVFIPDQMVVGAVNDGWRLARTTLANERVAMATGTALGNPME 596 Query 597 ELLKVLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRY 656 ELL+VL ++ELD QQDRL RLI+ Q GALLD+RIA+L +GG+DPGAQSSVRKLIGVRY Sbjct 597 ELLEVLAELELDTGQQDRLARLIVATQTGALLDQRIAQLVMGGRDPGAQSSVRKLIGVRY 656 Query 657 RQALAEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 RQALAEY+M+VS GGGLVENRAV+DFLNTRCLTIAGGTEQILLTVAAERLLGLPR Sbjct 657 RQALAEYMMDVSAGGGLVENRAVFDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 >gi|240169805|ref|ZP_04748464.1| FadE34 [Mycobacterium kansasii ATCC 12478] Length=713 Score = 1033 bits (2671), Expect = 0.0, Method: Compositional matrix adjust. Identities = 580/714 (82%), Positives = 631/714 (89%), Gaps = 4/714 (0%) Query 1 VVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 +VATVTDEQ AARELVR WART+ASG AATAA R ME E G+ DAWRPVFAGLA LGL Sbjct 1 MVATVTDEQFAARELVRDWARTSASGEAATAASRAME-ATEHGDPDAWRPVFAGLAELGL 59 Query 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF 120 FGVAVPED GGAGGSIEDLCAMV+EAA+ALVPGPVATTA+A L+VSDP+L + L +GER Sbjct 60 FGVAVPEDRGGAGGSIEDLCAMVEEAAKALVPGPVATTALAGLMVSDPELLAGLVTGERV 119 Query 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 AG+A++ V D +T SGT VLG G VVL+PA+G WLLVDTA D V +EPLRA Sbjct 120 AGLALEADVHFDAQTRRVSGTAPWVLGAVAGAVVLMPAEGRWLLVDTAGDGVQLEPLRAA 179 Query 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 DFS PLA++VLTSAP TV+ S ERVE+LAAT+LAAEAAGV RW LDTAVAYAKVREQFG Sbjct 180 DFSRPLAKVVLTSAPATVIADSRERVENLAATLLAAEAAGVTRWALDTAVAYAKVREQFG 239 Query 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAA---DSDGTQLSIAAAVAASIGIDAA 297 KPIGSFQAVKHLCA+MLCRAEQA+VAAADAARAA D D Q +IAAAVAA +GI AA Sbjct 240 KPIGSFQAVKHLCAEMLCRAEQAEVAAADAARAAGEAGDPDNRQFAIAAAVAAGVGIAAA 299 Query 298 KANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGV 357 KAN K CIQVLGGIGCTWEH AHLYLRRAH G FLGG+ RWLRR+ ALT+ GVRRRL V Sbjct 300 KANVKGCIQVLGGIGCTWEHHAHLYLRRAHANGRFLGGAERWLRRIAALTRDGVRRRLTV 359 Query 358 DLAEVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQE 417 DLA V LRPEIAAAVAEVAALPEEKRQ ALAD GLLAPHWP PYGRGAS AEQLLIDQE Sbjct 360 DLAGVEELRPEIAAAVAEVAALPEEKRQAALADAGLLAPHWPPPYGRGASAAEQLLIDQE 419 Query 418 LAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASL 477 +AAA V RPDLVIGWWAAPTILEHGTPEQIERFVPAT+RGEFLWCQLFSEPGAGSDLASL Sbjct 420 MAAAGVVRPDLVIGWWAAPTILEHGTPEQIERFVPATLRGEFLWCQLFSEPGAGSDLASL 479 Query 478 RTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIR 537 RT+A+R +GGWLLTGQKVWTS AH ARWGVCLARTDPDAPKHKGITYFLVDMT+PGIEIR Sbjct 480 RTRAMRTEGGWLLTGQKVWTSKAHLARWGVCLARTDPDAPKHKGITYFLVDMTSPGIEIR 539 Query 538 PLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEE 597 PLREITGD+LFNEVFLDNV VPDEMVVGAVNDGWRLARTTLANERVAMA+GTALGNPME+ Sbjct 540 PLREITGDALFNEVFLDNVLVPDEMVVGAVNDGWRLARTTLANERVAMASGTALGNPMEK 599 Query 598 LLKVLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYR 657 LL+VL E DVAQQDRL RLI++AQ GALLD+RIA+LAVGGQDPGAQSSVRKLIGVRYR Sbjct 600 LLEVLAKTEPDVAQQDRLARLIVIAQCGALLDQRIAQLAVGGQDPGAQSSVRKLIGVRYR 659 Query 658 QALAEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 QALAE++M++S+GGGLVEN+AVYDFLNTRCL+IAGGTEQILLT+AAERLLGLPR Sbjct 660 QALAEFMMDLSEGGGLVENQAVYDFLNTRCLSIAGGTEQILLTLAAERLLGLPR 713 >gi|342862405|ref|ZP_08719045.1| acyl-CoA dehydrogenase [Mycobacterium colombiense CECT 3035] gi|342130076|gb|EGT83410.1| acyl-CoA dehydrogenase [Mycobacterium colombiense CECT 3035] Length=716 Score = 1031 bits (2666), Expect = 0.0, Method: Compositional matrix adjust. Identities = 555/720 (78%), Positives = 625/720 (87%), Gaps = 13/720 (1%) Query 1 VVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 +VATVTDEQ AAR LVR WAR + SG T A+RD+E +G DAWRPV++ LA LG+ Sbjct 1 MVATVTDEQFAARALVRDWARNSTSGPGGTTAIRDVE----QGKPDAWRPVYSRLAELGI 56 Query 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVS----DPKLRSALAS 116 FGVA+PE+ GGAGGSIEDLCAMV+EAA+ALVPGPVATTA+AT+V+S DP+L ALA+ Sbjct 57 FGVAIPEELGGAGGSIEDLCAMVEEAAKALVPGPVATTALATVVLSEAGSDPELLGALAA 116 Query 117 GERFAGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEP 176 GERFAG+A++G V+ D TS ASGT+ LG A G V+L PA WLL+DT + V +EP Sbjct 117 GERFAGLALEGDVEFDGTTSKASGTLPFALGVADGAVLLAPAGAKWLLIDTGAEGVQIEP 176 Query 177 LRATDFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVR 236 L A+DFS PLAR+VL++AP TV+ + RVE+LAATVLAAEAAG+ RW+L+TAV YAKVR Sbjct 177 LAASDFSRPLARVVLSAAPATVVSDTRTRVEELAATVLAAEAAGITRWSLETAVDYAKVR 236 Query 237 EQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDA 296 EQFGKPIGSFQA+KH+CA+MLCRAEQA+VAAADAARAAA+ D +Q SIAA +AAS GI A Sbjct 237 EQFGKPIGSFQAIKHICAEMLCRAEQAEVAAADAARAAAEGDESQFSIAAGLAASTGIAA 296 Query 297 AKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLG 356 KAN KDCIQVLGGIGCTWEHDAHLYLRRAH IG FLGG+ WLRR+TALTQAGVRRRLG Sbjct 297 VKANVKDCIQVLGGIGCTWEHDAHLYLRRAHAIGRFLGGAETWLRRITALTQAGVRRRLG 356 Query 357 VDLAEVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQ 416 +DL EV R EIAAAVA +A LPE+KRQ ALA+ GL APHWPAPYGRGA PAEQLLIDQ Sbjct 357 IDLTEVEDQRAEIAAAVARIAELPEDKRQAALAEAGLQAPHWPAPYGRGAGPAEQLLIDQ 416 Query 417 ELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLAS 476 ELAAA V RPDLVIGWWAAPTILEHGTPEQ+ERFVP T RGEFLWCQLFSEPGAGSDLAS Sbjct 417 ELAAAGVARPDLVIGWWAAPTILEHGTPEQVERFVPGTTRGEFLWCQLFSEPGAGSDLAS 476 Query 477 LRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEI 536 LRTKAVR +GGW LTGQKVWTSAAHKA+WGVCLARTDPDAPKHKGITYFLV+M++PGIEI Sbjct 477 LRTKAVRTEGGWNLTGQKVWTSAAHKAKWGVCLARTDPDAPKHKGITYFLVEMSSPGIEI 536 Query 537 RPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPME 596 RPLREITGDSLFNEVFLDNVFVPDE+VVG VNDGWRLARTTLANERVAMA GTALGNPME Sbjct 537 RPLREITGDSLFNEVFLDNVFVPDELVVGEVNDGWRLARTTLANERVAMANGTALGNPME 596 Query 597 ELLKVLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRY 656 ELL++L +++LD A QDRLGRLI+ AQ GALLD+RIA+LAVGGQDPGAQSSVRKLIGVRY Sbjct 597 ELLELLAELDLDAAAQDRLGRLIVTAQTGALLDQRIAQLAVGGQDPGAQSSVRKLIGVRY 656 Query 657 RQALAEYLMEVSDGGGLVE-----NRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 RQALAE+ M+ S+GGGLV+ +RAV+DFLNTRCLTIAGGTEQILLTVAAERLLGLPR Sbjct 657 RQALAEFTMDSSEGGGLVDRRADGDRAVFDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 716 >gi|333992505|ref|YP_004525119.1| acyl-CoA dehydrogenase [Mycobacterium sp. JDM601] gi|333488473|gb|AEF37865.1| acyl-CoA dehydrogenase FadE34 [Mycobacterium sp. JDM601] Length=712 Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust. Identities = 534/713 (75%), Positives = 592/713 (84%), Gaps = 14/713 (1%) Query 4 TVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFGV 63 T +Q AARELVR WA A + A A E G DAW+PVFA LA LGLFGV Sbjct 8 TSAADQFAARELVRDWAAAAGTAEAIRA--------VELGETDAWKPVFARLAELGLFGV 59 Query 64 AVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERFAGV 123 AVPE+CGGAGG +EDLCAMVDEAA+ALVPGPVATTA+ATLVV+DP+L ALA GER AGV Sbjct 60 AVPEECGGAGGRLEDLCAMVDEAAKALVPGPVATTALATLVVADPQLTEALAVGERVAGV 119 Query 124 AIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRATDFS 183 AID G+ D SGT VLG +++LPA +W+LVD+ D V VEPL ATDFS Sbjct 120 AIDAGLHFDAAAGKVSGTAEWVLGATADALLVLPAGQDWVLVDSRADGVDVEPLIATDFS 179 Query 184 LPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFGKPI 243 PLA++ L+ AP +LE SG RVE+LA TVL+AEAAGVARW LDTAVAYAKVREQFGKPI Sbjct 180 RPLAKVTLSDAPAVILE-SGGRVENLAVTVLSAEAAGVARWALDTAVAYAKVREQFGKPI 238 Query 244 GSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKANAKD 303 GSFQAVKHLCA+MLCRAEQA VAAADAARAA+DSD Q +IAAAVAA+I IDAAKANAKD Sbjct 239 GSFQAVKHLCAEMLCRAEQATVAAADAARAASDSDQQQFAIAAAVAAAICIDAAKANAKD 298 Query 304 CIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLAEVA 363 CIQVLGGIG TWEHDAHLYLRRA+GIG LGG RWLRR TALT+AGVRRRL VDL + A Sbjct 299 CIQVLGGIGITWEHDAHLYLRRAYGIGQALGGQERWLRRTTALTRAGVRRRLEVDLDDAA 358 Query 364 G-LRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAAAK 422 +RPEIA A A +AALPEE+RQVALA++GLLAPHWPAPYGR A PAEQL+IDQELAAA Sbjct 359 SDIRPEIAEAAARIAALPEEQRQVALAESGLLAPHWPAPYGRAAGPAEQLVIDQELAAAG 418 Query 423 VERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTKAV 482 V RPDLVIGWWAAPTILEHGTPEQIERF+PAT+ GE WCQLFSEPGAGSDLA+LRTKAV Sbjct 419 VARPDLVIGWWAAPTILEHGTPEQIERFIPATLTGEVFWCQLFSEPGAGSDLAALRTKAV 478 Query 483 RADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLREI 542 + DGGW LTGQKVWTS A ++WG+CLARTD DAPKHKGITYFL+DM+ GI+IRPLREI Sbjct 479 KVDGGWRLTGQKVWTSRADDSQWGICLARTDADAPKHKGITYFLLDMSAEGIDIRPLREI 538 Query 543 TGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLKVL 602 TGD+LFNEVFLD+VFVPDEMVVG VNDGWRLARTTLANERVA+A GTALGNPMEELLK L Sbjct 539 TGDALFNEVFLDDVFVPDEMVVGGVNDGWRLARTTLANERVAIAGGTALGNPMEELLKAL 598 Query 603 ----GDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQ 658 D E D A DRL RLI+ AQAG+LLD+RIA+LAVGGQDPG++SSVRKLIGVRYRQ Sbjct 599 FGGQHDREPDTATADRLARLIIAAQAGSLLDQRIAQLAVGGQDPGSESSVRKLIGVRYRQ 658 Query 659 ALAEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 LAE MEV+DG G V R V+DFLNTRCL+IAGGTEQILLT+AAERLLGLPR Sbjct 659 DLAECRMEVADGAGAVAGRPVHDFLNTRCLSIAGGTEQILLTLAAERLLGLPR 711 >gi|108801675|ref|YP_641872.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119870826|ref|YP_940778.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. KMS] gi|108772094|gb|ABG10816.1| acyl-CoA dehydrogenase-like protein [Mycobacterium sp. MCS] gi|119696915|gb|ABL93988.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. KMS] Length=717 Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust. Identities = 514/715 (72%), Positives = 580/715 (82%), Gaps = 19/715 (2%) Query 6 TDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFGVAV 65 TDEQ AARE+VR WA + + AA E+G+ADAWR ++GLA LG+FGVA+ Sbjct 13 TDEQFAAREMVRDWAAASRASEAARE--------VEQGDADAWRRAYSGLAELGIFGVAI 64 Query 66 PEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERFAGVAI 125 PED GGAGG++ DLCAMVDEAA A+VPGPVATTA+ATLVV+D L ALASGER AG+ + Sbjct 65 PEDQGGAGGTVADLCAMVDEAAAAMVPGPVATTALATLVVADADLLEALASGERTAGLTL 124 Query 126 DGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRATDFSLP 185 + +D TASG VLG P G++LLPA +LVD D V VEPL ATDFS P Sbjct 125 TAELTLD--GGTASGVAPHVLGADPTGLLLLPAGDAVVLVDATADGVTVEPLTATDFSRP 182 Query 186 LARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFGKPIGS 245 LAR+VL +APV L+V+ ER+ DL AT+LAAEAAG+ARW L TA YAKVREQFGKPIGS Sbjct 183 LARVVLDNAPVVTLDVTAERLADLTATLLAAEAAGLARWQLVTATEYAKVREQFGKPIGS 242 Query 246 FQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKANAKDCI 305 FQA+KH+CA+ML RAEQ VA+ADAARA + D QLSIAAAVAA+ GIDAA+ANAKDCI Sbjct 243 FQAIKHMCAEMLLRAEQVSVASADAARAVTEGDERQLSIAAAVAAAAGIDAAEANAKDCI 302 Query 306 QVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLAEVAGL 365 QVLGGIG TWEHDAHLYLRRA+GI LGG RWLRR+ LTQ GVRR L +DL V GL Sbjct 303 QVLGGIGITWEHDAHLYLRRAYGISQALGGRSRWLRRIADLTQQGVRRELRIDLDSVEGL 362 Query 366 RPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAAAKVER 425 RPEI AAVAE+A LP E+RQ ALA+ GLLAPHWP P+GR AS AEQLLIDQELA A+V+R Sbjct 363 RPEIRAAVAEIAKLPAERRQPALAEAGLLAPHWPKPFGRAASAAEQLLIDQELAEAQVQR 422 Query 426 PDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTKAVRAD 485 PDLVIGWWAAPTILEHG+PEQIE+FVPAT+ GE WCQLFSEPGAGSDLA+LRTKAVRA+ Sbjct 423 PDLVIGWWAAPTILEHGSPEQIEQFVPATLSGELSWCQLFSEPGAGSDLAALRTKAVRAE 482 Query 486 G---------GWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEI 536 G GW LTGQKVWTSAAHKA WGVCLARTDPDAPKHKGITYFL+DM +PGI I Sbjct 483 GVSASGTKSSGWRLTGQKVWTSAAHKAHWGVCLARTDPDAPKHKGITYFLIDMKSPGIVI 542 Query 537 RPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPME 596 RPLREITGD LFNEVF D+VFVPDEMVVG VNDGWRLARTTLANER+AMA GTALGNPME Sbjct 543 RPLREITGDELFNEVFFDDVFVPDEMVVGKVNDGWRLARTTLANERIAMAGGTALGNPME 602 Query 597 ELLKVLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRY 656 ELL+ + + LD A QDRLGRLIL AQ G+LLD+RIA+ AVGGQDPGA+SS RKLIGVRY Sbjct 603 ELLRTVAEHGLDAADQDRLGRLILTAQVGSLLDQRIAQKAVGGQDPGAESSARKLIGVRY 662 Query 657 RQALAEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 RQ LAE+ M++SDG G V N+ V+DFLNTRCLTIAGGTEQILLT+A ERLLGLPR Sbjct 663 RQGLAEFRMDLSDGAGAVVNQQVHDFLNTRCLTIAGGTEQILLTLAGERLLGLPR 717 >gi|126437661|ref|YP_001073352.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium sp. JLS] gi|126237461|gb|ABO00862.1| acyl-CoA dehydrogenase domain protein [Mycobacterium sp. JLS] Length=717 Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/715 (72%), Positives = 579/715 (81%), Gaps = 19/715 (2%) Query 6 TDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFGVAV 65 TDEQ AARE+VR WA + + AA E+G+ADAWR ++GLA LG+FGVA+ Sbjct 13 TDEQFAAREMVRDWAAASRASEAARE--------VEQGDADAWRRAYSGLAELGIFGVAI 64 Query 66 PEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERFAGVAI 125 PED GGAGG++ DLCAMVDEAA A+VPGPVATTA+ATLVV+D L ALASGER AG+ + Sbjct 65 PEDQGGAGGTVADLCAMVDEAAAAMVPGPVATTALATLVVADADLLEALASGERTAGLTL 124 Query 126 DGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRATDFSLP 185 + +D TASG VLG P G++LLPA +LVD D V VEPL ATDFS P Sbjct 125 TAELTLD--GGTASGVAPHVLGADPTGLLLLPAGDAVVLVDATADGVTVEPLTATDFSRP 182 Query 186 LARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFGKPIGS 245 LAR+VL +A V L+V+ ER+ DL AT+LAAEAAG+ARW L TA YAKVREQFGKPIGS Sbjct 183 LARVVLDNAAVVTLDVTAERLADLTATLLAAEAAGLARWQLVTATEYAKVREQFGKPIGS 242 Query 246 FQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKANAKDCI 305 FQA+KH+CA+ML RAEQ VA+ADAARA + D QLSIAAAVAA+ GIDAA+ANAKDCI Sbjct 243 FQAIKHMCAEMLLRAEQVSVASADAARAVTEGDERQLSIAAAVAAAAGIDAAEANAKDCI 302 Query 306 QVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLAEVAGL 365 QVLGGIG TWEHDAHLYLRRA+GI LGG RWLRR+ LTQ GVRR L +DL V GL Sbjct 303 QVLGGIGITWEHDAHLYLRRAYGISQALGGRSRWLRRIADLTQQGVRRELRIDLDSVEGL 362 Query 366 RPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAAAKVER 425 RPEI AAVAE+A LP E+RQ ALA+ GLLAPHWP P+GR AS AEQLLIDQELA A+V+R Sbjct 363 RPEIRAAVAEIAKLPAEQRQPALAEAGLLAPHWPKPFGRAASAAEQLLIDQELAEAQVQR 422 Query 426 PDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTKAVRAD 485 PDLVIGWWAAPTILEHG+PEQIE+FVPAT+ GE WCQLFSEPGAGSDLA+LRTKAVRA+ Sbjct 423 PDLVIGWWAAPTILEHGSPEQIEQFVPATLSGELSWCQLFSEPGAGSDLAALRTKAVRAE 482 Query 486 G---------GWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEI 536 G GW LTGQKVWTSAAHKA WGVCLARTDPDAPKHKGITYFL+DM +PGI I Sbjct 483 GVSASGTKSSGWRLTGQKVWTSAAHKAHWGVCLARTDPDAPKHKGITYFLIDMKSPGIVI 542 Query 537 RPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPME 596 RPLREITGD LFNEVF D+VFVPDEMVVG VNDGWRLARTTLANER+AMA GTALGNPME Sbjct 543 RPLREITGDELFNEVFFDDVFVPDEMVVGKVNDGWRLARTTLANERIAMAGGTALGNPME 602 Query 597 ELLKVLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRY 656 ELL+ + + LD A QDRLGRLIL AQ G+LLD+RIA+ AVGGQDPGA+SS RKLIGVRY Sbjct 603 ELLRTVAEHGLDAADQDRLGRLILTAQVGSLLDQRIAQKAVGGQDPGAESSARKLIGVRY 662 Query 657 RQALAEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 RQ LAE+ M++SDG G V N+ V+DFLNTRCLTIAGGTEQILLT+A ERLLGLPR Sbjct 663 RQGLAEFRMDLSDGAGAVVNQQVHDFLNTRCLTIAGGTEQILLTLAGERLLGLPR 717 >gi|118473968|ref|YP_890265.1| acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] gi|118175255|gb|ABK76151.1| putative acyl-CoA dehydrogenase [Mycobacterium smegmatis str. MC2 155] Length=714 Score = 928 bits (2398), Expect = 0.0, Method: Compositional matrix adjust. Identities = 515/716 (72%), Positives = 579/716 (81%), Gaps = 21/716 (2%) Query 6 TDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFGVAV 65 T E+ AAR++VR WA + + AA + E + AWR + G A LG+FGVAV Sbjct 10 TSEEFAARDMVRSWAAASGAVAAVRES---------ETDPGAWRAAYQGFAELGIFGVAV 60 Query 66 PEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERFAGVAI 125 P++ GGAG ++ DL AM+DEAA ALVPGPV TTA+ATL+V+D L AL SGER AGVA+ Sbjct 61 PDELGGAGSTVADLAAMIDEAAAALVPGPVVTTALATLLVTDTGLLEALMSGERTAGVAL 120 Query 126 DGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRATDFSLP 185 V V ASGTV VLG GV+LLPA + LL+D D V VEPL ATDFS+P Sbjct 121 SADVTV--VDGRASGTVEFVLGADAAGVLLLPAGDDVLLLDAGADGVSVEPLTATDFSIP 178 Query 186 LARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFGKPIGS 245 LAR+ L +AP VL VS +R DLAAT+LAAEAAG+ARWTL+TA YAKVREQFGKPIGS Sbjct 179 LARVELDNAPAEVLPVSRQRFSDLAATLLAAEAAGLARWTLNTATEYAKVREQFGKPIGS 238 Query 246 FQAVKHLCAQMLCRAEQADVAAADAARAAADSDG----TQLSIAAAVAASIGIDAAKANA 301 FQA+KH+CA+ML R+EQ VAAADAA+A A+SDG TQLSIAAAVA + GIDAAKANA Sbjct 239 FQAIKHMCAEMLLRSEQIAVAAADAAKAVAESDGSDSATQLSIAAAVAVATGIDAAKANA 298 Query 302 KDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLAE 361 KDCIQVLGGIG TWEHDAHLYLRRA+GI FLGGS RW+RRV ALT+ G RR + +DL Sbjct 299 KDCIQVLGGIGITWEHDAHLYLRRAYGIAHFLGGSRRWVRRVAALTRQGARRDIDIDLES 358 Query 362 VAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAAA 421 VA LRPEI+AAVAEVAALPEEKRQVALA++GLLAPHWP PYGR ASPAEQLLIDQELAAA Sbjct 359 VADLRPEISAAVAEVAALPEEKRQVALAESGLLAPHWPKPYGRNASPAEQLLIDQELAAA 418 Query 422 KVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTKA 481 +VERPDLVIGWWA PTILEHG+PEQIE+FVPAT+RG+ WCQLFSEPGAGSDLA+LRTKA Sbjct 419 EVERPDLVIGWWAVPTILEHGSPEQIEQFVPATLRGDLFWCQLFSEPGAGSDLAALRTKA 478 Query 482 VRADG-----GWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEI 536 VRA+G GW LTGQKVWTSAA A WGVCLARTDPDAPKHKGITYFLVDM TPGI I Sbjct 479 VRAEGPNGEPGWKLTGQKVWTSAAQNAHWGVCLARTDPDAPKHKGITYFLVDMKTPGIVI 538 Query 537 RPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPME 596 RPLREITGD LFNEVF D+VFVPD MVVG VNDGWRLARTTLANERVAMA GTALGNPME Sbjct 539 RPLREITGDELFNEVFFDDVFVPDTMVVGTVNDGWRLARTTLANERVAMAGGTALGNPME 598 Query 597 ELLK-VLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVR 655 E+L+ V E D A QDRLG LI+ AQ G+LLD+RIA+LAV GQD GAQ+S RKLIGVR Sbjct 599 EVLRAVEAQPEFDPADQDRLGALIVTAQVGSLLDQRIAQLAVSGQDTGAQASARKLIGVR 658 Query 656 YRQALAEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 YRQALAE+ ME+++GGG V NR V+ FLNTRCLTIAGGTEQILLT+A ERLLGLPR Sbjct 659 YRQALAEFHMELTEGGGAVRNREVHTFLNTRCLTIAGGTEQILLTLAGERLLGLPR 714 >gi|120406259|ref|YP_956088.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119959077|gb|ABM16082.1| acyl-CoA dehydrogenase domain protein [Mycobacterium vanbaalenii PYR-1] Length=716 Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust. Identities = 520/720 (73%), Positives = 587/720 (82%), Gaps = 21/720 (2%) Query 3 ATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFG 62 A TD+QSAAR+LVR WA + + A RD+E +G+ DAWR +AGLA LG+FG Sbjct 7 APTTDDQSAARDLVRTWAAASRA----VEAARDVE----QGDPDAWRAPYAGLAELGIFG 58 Query 63 VAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPK--LRSALASGERF 120 VA+PE+ GGA G++ DL AM+DEAA ALVPGPVATTA+ATLV+S P L LA+GER Sbjct 59 VALPEEHGGADGTVSDLAAMIDEAAAALVPGPVATTALATLVLSGPHADLLEELATGERT 118 Query 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 AGV + +D SG+ VLG A GV+LLPA WLLVD A D V VE L+AT Sbjct 119 AGVTLTA--DLDYADGRVSGSAPYVLGAAATGVLLLPAGDTWLLVDAAADGVTVESLKAT 176 Query 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 DFS PLAR+VL AP VL+V ++V D+AAT+LAAEAAG+ARW LDTA YAKVREQFG Sbjct 177 DFSRPLARVVLDGAPAEVLDVPSQQVVDMAATLLAAEAAGLARWLLDTATEYAKVREQFG 236 Query 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN 300 KPIGSFQA+KH+CA+ML R+EQA VAAADAARAA +SD QLSIAAA+AAS+GI+AAKAN Sbjct 237 KPIGSFQAIKHMCAEMLLRSEQASVAAADAARAAGESDADQLSIAAALAASVGIEAAKAN 296 Query 301 AKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA 360 AKDCIQVLGGIG TWEHDAHLYLRRA+GI FLGG RWLRRV ALTQ GVRR L +DL Sbjct 297 AKDCIQVLGGIGITWEHDAHLYLRRAYGIAQFLGGRSRWLRRVAALTQQGVRRELHIDLE 356 Query 361 EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAA 420 VAGLRPEI +AVAEVAA PE+KRQVALA+ LLAPHWP P+GR A PAEQLLIDQELAA Sbjct 357 SVAGLRPEIVSAVAEVAAAPEDKRQVALAEARLLAPHWPPPHGRAAGPAEQLLIDQELAA 416 Query 421 AKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTK 480 A V RPDLVIGWWA PTILEHG+PEQ+E+FVP T+RGE WCQLFSEPGAGSDLA+LRTK Sbjct 417 AGVVRPDLVIGWWAVPTILEHGSPEQVEQFVPPTLRGELTWCQLFSEPGAGSDLAALRTK 476 Query 481 AVRADG---------GWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTT 531 AVR D GW LTGQKVWTSAA KA WGVCLARTDPDAPKHKGITYFL+DM + Sbjct 477 AVRVDDASASGASGPGWKLTGQKVWTSAAQKAHWGVCLARTDPDAPKHKGITYFLIDMKS 536 Query 532 PGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTAL 591 PGI IRPLREITGD LFNEVF D+VFVPDEMVVG VNDGWRLARTTLANERVAMA GTAL Sbjct 537 PGIVIRPLREITGDELFNEVFFDDVFVPDEMVVGQVNDGWRLARTTLANERVAMAQGTAL 596 Query 592 GNPMEELLKVLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKL 651 GNPMEELL+V+ +E+D AQQD+LG+LI+ AQ G+LLD+RIA+LAV GQDPG Q+S RKL Sbjct 597 GNPMEELLRVVAQLEVDGAQQDQLGQLIVTAQVGSLLDQRIAQLAVEGQDPGPQASARKL 656 Query 652 IGVRYRQALAEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 IGVRYRQALAE+ M++SDG G VENR V+DFLNTRCLTIAGGTEQILLT+A ERLLGLPR Sbjct 657 IGVRYRQALAEFRMDLSDGAGAVENRQVHDFLNTRCLTIAGGTEQILLTMAGERLLGLPR 716 >gi|145222052|ref|YP_001132730.1| acyl-CoA dehydrogenase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145214538|gb|ABP43942.1| acyl-CoA dehydrogenase domain protein [Mycobacterium gilvum PYR-GCK] Length=718 Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust. Identities = 508/722 (71%), Positives = 575/722 (80%), Gaps = 23/722 (3%) Query 3 ATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFG 62 AT+TDEQ+ ARELVR WA + S AA E+G+A AW+ + LA LG+FG Sbjct 7 ATITDEQADARELVRSWATASGSVEAARE--------VEQGDAAAWQAPYGRLAELGIFG 58 Query 63 VAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPK--LRSALASGERF 120 VA+PE GGA G++ DL AMVDEAA ALVPGPVATTA+ATLV+ D + L +LA+G+R+ Sbjct 59 VALPEAHGGADGTVADLAAMVDEAAAALVPGPVATTALATLVLPDGQADLLESLATGQRW 118 Query 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 AGVA++ + SGT VLG V+LLP WLLVD D V VEPL+AT Sbjct 119 AGVALNADLSY--ADGRVSGTAAYVLGADESAVLLLPVGETWLLVDAGADGVTVEPLQAT 176 Query 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 DFS PLAR+ AP L VSG+RV DLAATV+AAE+AG+ARW L TA YAKVREQFG Sbjct 177 DFSRPLARVSFDGAPAEALPVSGQRVVDLAATVMAAESAGLARWLLHTATEYAKVREQFG 236 Query 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSD--GTQLSIAAAVAASIGIDAAK 298 KPIGSFQA+KH+CA+ML R+EQA VAAADAARAA+D G QLSIAAA+AAS+GI+AAK Sbjct 237 KPIGSFQAIKHMCAEMLLRSEQASVAAADAARAASDPAADGAQLSIAAALAASVGIEAAK 296 Query 299 ANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVD 358 ANAKDCIQVLGGIG TWEHDAHLYLRRA+GI FLGG WLRRV ALTQ GVRR L +D Sbjct 297 ANAKDCIQVLGGIGITWEHDAHLYLRRAYGIAQFLGGRSHWLRRVAALTQQGVRRELHID 356 Query 359 LAEVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQEL 418 L VA LRPEIA+AVAEVAA PE+ RQVALA+TGLLAPHWP PYGR A PAEQLLIDQEL Sbjct 357 LESVADLRPEIASAVAEVAAAPEDGRQVALAETGLLAPHWPKPYGRAAGPAEQLLIDQEL 416 Query 419 AAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLR 478 A+A V RPDLVIGWWA PTILEHG+PE IE+FVP T+RGE WCQLFSEPGAGSDLA+LR Sbjct 417 ASAGVVRPDLVIGWWAVPTILEHGSPELIEQFVPPTLRGELTWCQLFSEPGAGSDLAALR 476 Query 479 TKAVRADG---------GWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDM 529 KAVRA+G GW LTGQKVWTSAA KA WGVCLARTDP+A KHKGITYFL+DM Sbjct 477 MKAVRAEGASASGAKVSGWKLTGQKVWTSAAQKAHWGVCLARTDPEAAKHKGITYFLIDM 536 Query 530 TTPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGT 589 +PGI IRPLREITGD LFNEVF D+VFVPDEMVVG VN GWRLARTTLANERVAMA GT Sbjct 537 KSPGIVIRPLREITGDELFNEVFFDDVFVPDEMVVGEVNQGWRLARTTLANERVAMAQGT 596 Query 590 ALGNPMEELLKVLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVR 649 ALGNPMEELL+V+ ++++D AQQDRLG LI AQ G LLD+RIA+LAV GQDPG Q+S R Sbjct 597 ALGNPMEELLRVIAELDVDGAQQDRLGHLIGTAQVGTLLDQRIAQLAVEGQDPGPQASAR 656 Query 650 KLIGVRYRQALAEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGL 709 KLIGVRYRQALAE+ ME+S+G G + N+ V+DFLNTRCLTIAGGTEQILLT+A ERLLGL Sbjct 657 KLIGVRYRQALAEFRMELSEGAGAIVNQQVHDFLNTRCLTIAGGTEQILLTMAGERLLGL 716 Query 710 PR 711 PR Sbjct 717 PR 718 >gi|315446206|ref|YP_004079085.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] gi|315264509|gb|ADU01251.1| acyl-CoA dehydrogenase [Mycobacterium sp. Spyr1] Length=718 Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust. Identities = 500/722 (70%), Positives = 572/722 (80%), Gaps = 23/722 (3%) Query 3 ATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFG 62 AT+TDEQ+ ARELVR WA + S AA R++E +G+A AW+ + LA LG+FG Sbjct 7 ATITDEQADARELVRSWATASGSFEAA----REVE----QGDAAAWQAPYGRLAELGIFG 58 Query 63 VAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPK--LRSALASGERF 120 VA+PE GGA G++ DL AMVDEAA ALVPGPVATTA+ATLV+ D + L +LA+G+R+ Sbjct 59 VALPEAHGGADGTVADLAAMVDEAAAALVPGPVATTALATLVLPDGQADLLESLATGQRW 118 Query 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 AGVA++ + SGT VLG V+LLPA WLLVD D V VEPL+AT Sbjct 119 AGVALNADLSY--ADGRVSGTAAYVLGADESAVLLLPAGETWLLVDAGADGVTVEPLQAT 176 Query 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 DFS PLAR+ AP L VSG+RV DLAAT++AAE+AG+ARW L TA YAKVREQFG Sbjct 177 DFSRPLARVSFDGAPAEALPVSGQRVVDLAATLMAAESAGLARWLLHTATEYAKVREQFG 236 Query 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAAS--IGIDAAK 298 KPIGSFQA+KH+CA+ML R+EQA VAAADAARAA+D ++ A A + +GI+AAK Sbjct 237 KPIGSFQAIKHMCAEMLLRSEQASVAAADAARAASDPAADAAQLSIAAALAASVGIEAAK 296 Query 299 ANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVD 358 ANAKDCIQVLGGIG TWEHDAHLYLRRA+GI FLGG WLRRV ALTQ GVRR L +D Sbjct 297 ANAKDCIQVLGGIGITWEHDAHLYLRRAYGIAQFLGGRSHWLRRVAALTQQGVRRELHID 356 Query 359 LAEVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQEL 418 L VA LRPEIA+AVAEVAA PE+ RQVALA+TGLLAPHWP PYGR A PAEQLLIDQEL Sbjct 357 LESVADLRPEIASAVAEVAAAPEDGRQVALAETGLLAPHWPKPYGRAAGPAEQLLIDQEL 416 Query 419 AAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLR 478 A+A V RPDLVIGWWA PTILEHG+PE IE+FVP T+RGE WCQLFSEPGAGSDLA+LR Sbjct 417 ASAGVVRPDLVIGWWAVPTILEHGSPELIEQFVPPTLRGELTWCQLFSEPGAGSDLAALR 476 Query 479 TKAVRADG---------GWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDM 529 KAVRA+G GW LTGQKVWTSAA KA WGVCLARTDP+A KHKGITYFL+DM Sbjct 477 MKAVRAEGASASGAKVSGWKLTGQKVWTSAAQKAHWGVCLARTDPEAAKHKGITYFLIDM 536 Query 530 TTPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGT 589 +PGI IRPLREITGD LFNEVF D+VFVPDEMVVG VN GWRLARTTLANERVAMA GT Sbjct 537 KSPGIVIRPLREITGDELFNEVFFDDVFVPDEMVVGEVNQGWRLARTTLANERVAMAQGT 596 Query 590 ALGNPMEELLKVLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVR 649 ALGNPMEELL+V+ ++++D AQQDRLG LI AQ G LLD+RIA+LAV GQDPG Q+S R Sbjct 597 ALGNPMEELLRVIAELDVDGAQQDRLGHLIGTAQVGTLLDQRIAQLAVEGQDPGPQASAR 656 Query 650 KLIGVRYRQALAEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGL 709 KLIGVRYRQALAE+ ME+S+G G + N+ V+DFLNTRCLTIAGGTEQILLT+A ERLLGL Sbjct 657 KLIGVRYRQALAEFRMELSEGAGAIVNQQVHDFLNTRCLTIAGGTEQILLTMAGERLLGL 716 Query 710 PR 711 PR Sbjct 717 PR 718 >gi|169627683|ref|YP_001701332.1| acyl-CoA dehydrogenase FadE [Mycobacterium abscessus ATCC 19977] gi|169239650|emb|CAM60678.1| Probable acyl-CoA dehydrogenase FadE [Mycobacterium abscessus] Length=715 Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust. Identities = 432/714 (61%), Positives = 513/714 (72%), Gaps = 19/714 (2%) Query 6 TDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFGVAV 65 ++ Q AAR+ VR WAR+AA +VR ME D W P + GLA LG+FGVAV Sbjct 13 SEVQEAARDAVRQWARSAA----VIESVRKME-----SEPDGWGPAYVGLAELGIFGVAV 63 Query 66 PEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVS---DPKLRSALASGERFAG 122 PE GG+G +D+ AMVDEAA +LVPGPVAT+A+ +V++ +L LA+GER AG Sbjct 64 PEAAGGSGAGFDDMIAMVDEAAASLVPGPVATSALVAVVLAADGHEELVPPLAAGERTAG 123 Query 123 VAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRATDF 182 +A+ G + + ASG + VLGG GV+L P W+LVD A V VE +ATDF Sbjct 124 LALTGNLAI--ADGLASGVLPAVLGGTADGVLLAPVPDGWVLVDCAEAGVAVEAKKATDF 181 Query 183 SLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFGKP 242 S P + L A V + + + DL+ L+AEA GVARW L TAV YAKVREQFGK Sbjct 182 SRPWVTVTLHGAAVRPVGLPAAVIADLSVVTLSAEAVGVARWALQTAVEYAKVREQFGKQ 241 Query 243 IGSFQAVKHLCAQMLCRAEQADVAAADAARAAAD-----SDGTQLSIAAAVAASIGIDAA 297 IGSFQA+KH+CA+MLCR EQADVA DAA A D D QLS+AAAVAA++ +DAA Sbjct 242 IGSFQAIKHMCAEMLCRVEQADVAVWDAAGCAQDVLANKGDSQQLSLAAAVAAAVAVDAA 301 Query 298 KANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGV 357 AN KDCIQ+LGGIG TWEHDAHLYLRRA+ + F+G W R+ ALT G+RR L + Sbjct 302 VANTKDCIQILGGIGFTWEHDAHLYLRRAYALQSFVGKPAVWRRKAAALTIGGIRRSLTI 361 Query 358 DLAEVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQE 417 DL EV R E+A VAE+A+ P+ + QV LA+ G LAPHWPAPYG GA A+QLLIDQE Sbjct 362 DLGEVESQRAEVAGQVAEIASAPKAEHQVRLAEAGFLAPHWPAPYGLGAGAAQQLLIDQE 421 Query 418 LAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASL 477 L AA V RPDLVIGWWAAPTILEHGTPEQI +FV T+RGE WCQLFSEPGAGSDLA+L Sbjct 422 LHAAGVNRPDLVIGWWAAPTILEHGTPEQIAQFVAPTLRGEIEWCQLFSEPGAGSDLAAL 481 Query 478 RTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIR 537 RTKA R DGGW L GQKVW S A A W +CLART+PD PKHKGITYFL+DM TPGI +R Sbjct 482 RTKATRVDGGWKLDGQKVWNSKAQIADWAICLARTNPDVPKHKGITYFLLDMKTPGITVR 541 Query 538 PLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEE 597 PLREITG+ +FNEVFLD V VPDE VVG+V+DGWRLARTTLANERVAMA G L ME Sbjct 542 PLREITGEEMFNEVFLDGVIVPDENVVGSVDDGWRLARTTLANERVAMAGGGTLDEAMES 601 Query 598 LLKVLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYR 657 LL ++GD ELD AQ D LG + AQ GALLD R A A+GGQDPGA SSVRKL+GVR+R Sbjct 602 LLALIGDTELDAAQLDTLGAFVCSAQTGALLDLRTALRAIGGQDPGAASSVRKLVGVRHR 661 Query 658 QALAEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 Q L+E++++ D G VE+R ++ F+ RCL+IAGGT QILL+VA ERLLGLPR Sbjct 662 QGLSEHILDYVDTHGAVESREMWLFMRDRCLSIAGGTTQILLSVAGERLLGLPR 715 >gi|111021455|ref|YP_704427.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110820985|gb|ABG96269.1| possible acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length=721 Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust. Identities = 413/729 (57%), Positives = 496/729 (69%), Gaps = 35/729 (4%) Query 5 VTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFGVA 64 T+EQ AA ++ WAR+ D +G AD+WR + A LG+F VA Sbjct 5 TTEEQRAAAGSIQAWARST-----------DPLVTVRQGPADSWRTSWPSFASLGIFSVA 53 Query 65 VPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVV------SDPKLRSALASGE 118 VPE+ GG+G I DL AM+++AA LVPGPV +TA+A LVV + + LA G Sbjct 54 VPEEVGGSGAEIVDLAAMLEQAATELVPGPVLSTALAALVVGRSSGAAAKRWSEDLADGA 113 Query 119 RFAGVAIDGGVQVDPKTS-----TASGTVGRVLGGAPGGVVLLPADGN----WLLVDTAC 169 VA+ V+ T +G G +GG G VLL AD W L+D Sbjct 114 MPCAVALGSNSPVNATLGADGGLTVTGDAGFAIGGDTGVSVLLSADAGDGVVWCLIDGEA 173 Query 170 DEVVVEPLRATDFSLPLARM----VLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWT 225 D + V D S PLAR+ V +A V V V DLAAT+ A EA+G+A W Sbjct 174 DGLDVTVADTIDKSRPLARVRCDRVAVAADRVVTGVRDGLVADLAATLAAVEASGIAAWC 233 Query 226 LDTAVAYAKVREQFGKPIGSFQAVKHLCAQMLCRAEQA---DVAAADAARAAADSDGTQL 282 L TAV YAK+REQFGKPIGSFQA+KHLCA+MLCR EQ+ AA AA A D+DG +L Sbjct 234 LRTAVEYAKIREQFGKPIGSFQAIKHLCAEMLCRVEQSGAAAWDAAVAAEDAWDADGGEL 293 Query 283 SIAAAVAASIGIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRR 342 IAAAVAAS+ +DAA AKDCIQVLGGIG TWEHDAH YLRRA + LGGS RW R Sbjct 294 PIAAAVAASLTLDAAVETAKDCIQVLGGIGFTWEHDAHFYLRRATSLRQLLGGSARWRAR 353 Query 343 VTALTQAGVRRRLGVDLAEVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPY 402 VT LT+AG RR L +DL+ + R +I A +A++ A PE +R+ ALA++G LAPHWPAPY Sbjct 354 VTELTRAGARRHLSIDLSGLDDERAQIRAEIADLVARPESERRAALAESGYLAPHWPAPY 413 Query 403 GRGASPAEQLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWC 462 GRGA AEQ+LI++ELAAA V RPDLVIGWWA PTILEHG+ EQIERF T+RGE +WC Sbjct 414 GRGARAAEQILIEEELAAAGVGRPDLVIGWWAVPTILEHGSAEQIERFATPTLRGEIIWC 473 Query 463 QLFSEPGAGSDLASLRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGI 522 QLFSEPGAGSDLA+LRT A + DGGW L GQKVWTS A +A W +CLARTD DAPKH+GI Sbjct 474 QLFSEPGAGSDLAALRTSAEKVDGGWRLNGQKVWTSRAQEADWAICLARTDRDAPKHRGI 533 Query 523 TYFLVDMTTPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANER 582 +YFLVDMT+PGI I PLREITGD+LFNEV+L++VFVPDE+VVG + DGW+LARTTLANER Sbjct 534 SYFLVDMTSPGITISPLREITGDALFNEVYLEDVFVPDELVVGNLGDGWKLARTTLANER 593 Query 583 VAMATGTALGNPMEELLKVLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDP 642 VAM G++LG MEELL + G D DRLG LI A G+ L+ R + GQDP Sbjct 594 VAMGGGSSLGAAMEELLALAGVG--DPVTDDRLGHLIGNALVGSQLELRTTLRQLDGQDP 651 Query 643 GAQSSVRKLIGVRYRQALAEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVA 702 G +SSVRKL+GVR RQA+AE+ ME+ G VE +FLNTRCL+IAGGT QILLTVA Sbjct 652 GPESSVRKLVGVRQRQAVAEFAMELGGVDGWVEGPLAREFLNTRCLSIAGGTTQILLTVA 711 Query 703 AERLLGLPR 711 AER+LGLPR Sbjct 712 AERILGLPR 720 >gi|226363821|ref|YP_002781603.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226242310|dbj|BAH52658.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length=721 Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/699 (59%), Positives = 486/699 (70%), Gaps = 38/699 (5%) Query 42 EGNADAWRPVFAGLAGLGLFGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVA 101 +G AD+WR + + LG+F VAVPE+ GG+G I DL AM+++AA LVPGPV +TA+A Sbjct 31 QGPADSWRTSWPSFSALGIFSVAVPEEVGGSGAEIVDLAAMLEQAATELVPGPVLSTALA 90 Query 102 TLVV---------------SDPKLRSALASGERF---AGVAIDGGVQVDPKTSTASGTVG 143 LVV +D + A+A G A + +DGG+ T +G G Sbjct 91 ALVVGRSSGAAAKRWSEDLADGAMPCAVALGSNSPVNATLGVDGGL-------TITGDAG 143 Query 144 RVLGGAPGGVVLLPADGN----WLLVDTACDEVVVEPLRATDFSLPLARM----VLTSAP 195 +G G VLLPAD W LVD D + + D S PLAR+ V +A Sbjct 144 FAIGSDAGVSVLLPADAGEGVVWCLVDGDSDGLDITVADTIDKSRPLARVRCDGVAVAAD 203 Query 196 VTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFGKPIGSFQAVKHLCAQ 255 V V V DLAAT+ AAEA+G+A W L TAV YAK+REQFG PIGSFQA+KHLCA+ Sbjct 204 RVVTGVRDGLVTDLAATLAAAEASGIASWCLRTAVEYAKIREQFGTPIGSFQAIKHLCAE 263 Query 256 MLCRAEQA---DVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKANAKDCIQVLGGIG 312 MLCR EQ+ AA AA A D+DG +L +AAAVAA+I +DAA AKDCIQVLGGIG Sbjct 264 MLCRVEQSGAAAWDAAVAAEHAWDADGGELPVAAAVAAAITLDAAVETAKDCIQVLGGIG 323 Query 313 CTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLAEVAGLRPEIAAA 372 TWEHDAH YLRRA + LGGS RW RVT LT+AG RR L +DL+ + R I A Sbjct 324 FTWEHDAHFYLRRATSLRQLLGGSTRWRARVTELTRAGARRHLSIDLSGLDEERARIRAE 383 Query 373 VAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAAAKVERPDLVIGW 432 +AE+ A PE +R+ ALAD+G LAPHWPAPYGRGA AEQ+LI++ELAA V RPDLVIGW Sbjct 384 IAELVARPESERRAALADSGYLAPHWPAPYGRGARAAEQILIEEELAAVGVGRPDLVIGW 443 Query 433 WAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTKAVRADGGWLLTG 492 WA PTILEHG+ EQIERF T+RGE +WCQLFSEPGAGSDLA+LRT A R DGGW L G Sbjct 444 WAVPTILEHGSAEQIERFATPTLRGEIIWCQLFSEPGAGSDLAALRTSAERVDGGWTLNG 503 Query 493 QKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLREITGDSLFNEVF 552 QKVWTS A +A W +CLARTD DAPKHKGITYFLVDMT+PGI I PLREITGD+LFNEV+ Sbjct 504 QKVWTSRAQEADWAICLARTDRDAPKHKGITYFLVDMTSPGITISPLREITGDALFNEVY 563 Query 553 LDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLKVLGDMELDVAQQ 612 L++VFVPDE+VVG + DGW+LARTTLANERVAM G++LG ME+LL + GD D Sbjct 564 LEDVFVPDELVVGNLGDGWKLARTTLANERVAMGGGSSLGAAMEDLLALAGDG--DPVID 621 Query 613 DRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQALAEYLMEVSDGGG 672 DRLG LI A G+ L+ R + GQDPG +SSVRKL+GVR RQA+AE+ ME+ G Sbjct 622 DRLGHLIGNALVGSQLELRTTLRQLDGQDPGPESSVRKLVGVRQRQAVAEFAMELGGPDG 681 Query 673 LVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 VE +FLNTRCL+IAGGT QILLTVAAER+LGLPR Sbjct 682 WVEGPLAREFLNTRCLSIAGGTTQILLTVAAERILGLPR 720 >gi|325674979|ref|ZP_08154666.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|325554565|gb|EGD24240.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length=726 Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust. Identities = 418/733 (58%), Positives = 506/733 (70%), Gaps = 40/733 (5%) Query 6 TDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFGVAV 65 +DEQ A +E ++ WAR+AA A EG AD+W + +A LGLF V V Sbjct 6 SDEQKAVQESIQAWARSAAPIAI-----------LREGPADSWCQTWPSVAQLGLFAVGV 54 Query 66 PEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSA------LASGER 119 PE GG GG + DL AM++++A LV GPV TA+A LV+ +A +A GE Sbjct 55 PESVGGVGGQVVDLAAMLEQSAVELVGGPVLPTALAGLVLGRCDGAAAKAWAGQIAEGEL 114 Query 120 FAGVAIDG-GVQVDPKTS---TASGTVGRVLGGAPGGVVLLPA----DGNWLLVDTACDE 171 V +D ++ P +G G LGG PG VL+PA D W LVD A Sbjct 115 PVSVVLDAPALEATPDADGGLVLAGDAGNALGGEPGVAVLVPARSGADVVWCLVDGAATG 174 Query 172 VVVEPLRATDFSLPLARMVLTSAPVT----VLEVSGERVEDLAATVLAAEAAGVARWTLD 227 + VEPL D S +AR+ VT V V+ + V DLAAT++AAEAAGVA W+L Sbjct 175 LTVEPLDILDKSRAVARIRFDGVAVTPDRVVTGVAPDLVRDLAATLVAAEAAGVAGWSLR 234 Query 228 TAVAYAKVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAAD---------SD 278 TAV YAK+REQFGKPIGSFQA+KHLCA+MLCR EQA A DAA AA D S Sbjct 235 TAVEYAKIREQFGKPIGSFQAIKHLCAEMLCRVEQARAVAWDAAVAAEDALPDPDTGRSG 294 Query 279 GTQLSIAAAVAASIGIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGR 338 ++L +AAAVAA++ +DAA NAKDCIQ+LGGIG TWEHDAH YLRRA FLGGS Sbjct 295 TSELPVAAAVAAAVALDAAVQNAKDCIQILGGIGFTWEHDAHFYLRRAVSNKQFLGGSNV 354 Query 339 WLRRVTALTQAGVRRRLGVDLAEVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHW 398 W RVT LT+AG RR L +DL+++ R I VA +AA+PE +R+VA+A++G APHW Sbjct 355 WRARVTELTRAGARRHLTIDLSDLESERAAIRDEVAALAAVPEAERRVAVAESGYAAPHW 414 Query 399 PAPYGRGASPAEQLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGE 458 P PYGRGAS AEQ+LI +E+AAA VERPDLVIGWWA PT+LEHG+PEQIERF T+RGE Sbjct 415 PRPYGRGASAAEQILIAEEMAAAGVERPDLVIGWWAVPTVLEHGSPEQIERFALPTLRGE 474 Query 459 FLWCQLFSEPGAGSDLASLRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPK 518 WCQLFSEPGAGSDLASLRT A + DGGW L GQKVWTS A +A WG+CLARTD DAPK Sbjct 475 ITWCQLFSEPGAGSDLASLRTVAEKVDGGWKLNGQKVWTSLAREADWGICLARTDKDAPK 534 Query 519 HKGITYFLVDMTTPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTL 578 HKGITYF++DM TPGI I PLREITGD+LFNEVFLD+VF+PD+ VVG VN GW+LARTTL Sbjct 535 HKGITYFVLDMKTPGIRISPLREITGDALFNEVFLDDVFIPDDCVVGEVNGGWKLARTTL 594 Query 579 ANERVAMATGTALGNPMEELLKVLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVG 638 ANERVAM+ G++LG +E+LL++ G E D D LG LI A G+LL+ R + Sbjct 595 ANERVAMSGGSSLGKAVEDLLELAG--EPDAVTADHLGALISEALVGSLLELRTTLRQLD 652 Query 639 GQDPGAQSSVRKLIGVRYRQALAEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQIL 698 GQDPG SSVRKL+GVR RQ +AE+ +E+++ G VE +FLNTRCL+IAGGT QIL Sbjct 653 GQDPGPASSVRKLVGVRNRQGVAEFAVELAEEAGWVEGPLTREFLNTRCLSIAGGTTQIL 712 Query 699 LTVAAERLLGLPR 711 LTVAAE+LLGLPR Sbjct 713 LTVAAEQLLGLPR 725 >gi|226304196|ref|YP_002764154.1| hypothetical protein RER_07070 [Rhodococcus erythropolis PR4] gi|226183311|dbj|BAH31415.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=720 Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/729 (56%), Positives = 492/729 (68%), Gaps = 38/729 (5%) Query 6 TDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFGVAV 65 TDEQ A +E + WAR+A DM G A +WR ++ A LG+F VAV Sbjct 6 TDEQRAVQESIEAWARSATP--------MDM---VRRGPAVSWREKWSEFASLGIFSVAV 54 Query 66 PEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERFAGVAI 125 PE GGAG I DL AM+++AA LVPGPV TTA+A LVV +A E A A+ Sbjct 55 PESVGGAGAEIVDLAAMLEQAAIELVPGPVLTTALAALVVGRSSSPAAKRWSEMLADGAL 114 Query 126 DGGVQVDPK----TSTASGTV------GRVLGGAPGGVVLLPA------DGN---WLLVD 166 V +D T+ ASG + G GG G VL+ A +G+ W LVD Sbjct 115 PCAVVLDESPVAATANASGGIELHGEGGYAWGGDSGVSVLVSAGVVSEGEGSRVVWALVD 174 Query 167 TACDEVVVEPLRATDFSLPLARM----VLTSAPVTVLEVSGERVEDLAATVLAAEAAGVA 222 + V E + D S PLAR+ V A + +++ V DLAA + AAEAAG+A Sbjct 175 GDSEGVTYEAVDTIDKSRPLARVSFDRVTVDADRILDDIAPGSVSDLAAVLGAAEAAGIA 234 Query 223 RWTLDTAVAYAKVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQL 282 W+L TAV YAK+REQFGKPIGSFQA+KH+CA+MLCR E A A D A AA D +L Sbjct 235 AWSLRTAVEYAKIREQFGKPIGSFQAIKHICAEMLCRVENAGAVAWDGAVAAESGD--EL 292 Query 283 SIAAAVAASIGIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRR 342 IAAAVAA++ +DAA AKDCIQVLGGIG TWEH+AH YLRRA + LGGS RW R Sbjct 293 PIAAAVAAAVSLDAAVDTAKDCIQVLGGIGFTWEHEAHFYLRRALSLRQILGGSSRWRAR 352 Query 343 VTALTQAGVRRRLGVDLAEVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPY 402 V LT G RR L +DL+E+ R +I VA++ ALPE +++ ALA++G LAPHWP PY Sbjct 353 VAELTIGGARRHLQIDLSELESDRSDIREEVAQLVALPESEQRNALAESGYLAPHWPKPY 412 Query 403 GRGASPAEQLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWC 462 GRGA A+Q+LI++ELAA + RPDLVIGWWA PTILEHG+ EQIERF T++GE WC Sbjct 413 GRGAKAAQQILIEEELAAVGIGRPDLVIGWWAVPTILEHGSAEQIERFATPTLKGEITWC 472 Query 463 QLFSEPGAGSDLASLRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGI 522 QLFSEPGAGSDLA+LRT A + DGGW L GQKVWTS A +A W +CLARTD + PKHKGI Sbjct 473 QLFSEPGAGSDLAALRTTAEKVDGGWKLNGQKVWTSLAREADWAICLARTDREVPKHKGI 532 Query 523 TYFLVDMTTPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANER 582 TYFL+DM T GI I PLREITGD+LFNEVFLD+VFVPD+ VVG + GW+LARTTLANER Sbjct 533 TYFLLDMKTAGIRISPLREITGDALFNEVFLDDVFVPDDCVVGRLGGGWKLARTTLANER 592 Query 583 VAMATGTALGNPMEELLKVLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDP 642 VAM+ G++LG MEELL++ GD + VA D+LG LI A G+LL+ R + GQDP Sbjct 593 VAMSGGSSLGGAMEELLELAGDPDPVVA--DKLGGLIGTAMVGSLLELRTTLRQLDGQDP 650 Query 643 GAQSSVRKLIGVRYRQALAEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVA 702 G SSVRKL+GVR RQ +AE+ ME+ G VE +FLNTRCL+IAGGT QILLTVA Sbjct 651 GPASSVRKLVGVRQRQNVAEFAMELGGPAGWVEGPLSREFLNTRCLSIAGGTTQILLTVA 710 Query 703 AERLLGLPR 711 AER+LGLPR Sbjct 711 AERILGLPR 719 >gi|229494368|ref|ZP_04388131.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] gi|229318730|gb|EEN84588.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] Length=720 Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/729 (56%), Positives = 489/729 (68%), Gaps = 38/729 (5%) Query 6 TDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFGVAV 65 TDEQ A +E + WAR+A DM G A +WR ++ A LG+F VA Sbjct 6 TDEQRAVQESIEAWARSATP--------MDM---VRRGPAVSWREKWSEFASLGIFSVAA 54 Query 66 PEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERFAGVAI 125 PE GGAG I DL AM+++AA LVPGPV TTA+A LVV +A E A A+ Sbjct 55 PEAVGGAGAEIVDLAAMLEQAAIELVPGPVLTTALAALVVGRSSSPAAKRWSETLADGAL 114 Query 126 DGGVQVDPK----TSTASGTV------GRVLGGAPGGVVLLPA------DGN---WLLVD 166 V +D T+ ASG + G GG G VL+ A +G+ W LVD Sbjct 115 PCAVVLDESPVAATANASGGIELHGEAGYAWGGDSGVSVLVSAGVVSEDEGSRVVWALVD 174 Query 167 TACDEVVVEPLRATDFSLPLARM----VLTSAPVTVLEVSGERVEDLAATVLAAEAAGVA 222 + V E + D S PLAR+ V A + +++ V DLAA + AAEAAG+A Sbjct 175 GDSEGVTYEAVDTIDKSRPLARVSFDRVTVDADRILDDIAPGSVSDLAAVLGAAEAAGIA 234 Query 223 RWTLDTAVAYAKVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQL 282 W+L TAV YAK+REQFGKPIGSFQA+K +CA+MLCR E A A D A AA D +L Sbjct 235 AWSLRTAVEYAKIREQFGKPIGSFQAIKQICAEMLCRVENAGAVAWDGAVAAESGD--EL 292 Query 283 SIAAAVAASIGIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRR 342 IAAAVAA++ +DAA AKDCIQVLGGIG TWEH+AH YLRRA + LGGS W R Sbjct 293 PIAAAVAAAVSLDAAVDTAKDCIQVLGGIGFTWEHEAHFYLRRALSLRQILGGSSHWRAR 352 Query 343 VTALTQAGVRRRLGVDLAEVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPY 402 V LT G RR L +DL+E+ R EI VA++ ALPE +++ ALA++G LAPHWP PY Sbjct 353 VAELTIGGARRHLQIDLSELESDRSEIREEVAQLVALPESEQRNALAESGYLAPHWPKPY 412 Query 403 GRGASPAEQLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWC 462 GRGA A+Q+LI++ELAA + RPDLVIGWWA PTILEHG+ EQIERF T++GE WC Sbjct 413 GRGAKAAQQILIEEELAAVGIGRPDLVIGWWAVPTILEHGSAEQIERFATPTLKGEITWC 472 Query 463 QLFSEPGAGSDLASLRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGI 522 QLFSEPGAGSDLA+LRT A + DGGW L GQKVWTS A +A W +CLARTD + PKHKGI Sbjct 473 QLFSEPGAGSDLAALRTTAEKVDGGWKLNGQKVWTSLAREADWAICLARTDREVPKHKGI 532 Query 523 TYFLVDMTTPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANER 582 TYFL+DM T GI I PLREITGD+LFNEVFLD+VFVPDE VVG + GW+LARTTLANER Sbjct 533 TYFLLDMKTAGIRISPLREITGDALFNEVFLDDVFVPDECVVGQLGGGWKLARTTLANER 592 Query 583 VAMATGTALGNPMEELLKVLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDP 642 VAM+ G++LG MEELL++ GD + VA D+LG LI A G+LL+ R + GQDP Sbjct 593 VAMSGGSSLGGAMEELLELAGDPDPVVA--DKLGGLIGTAMVGSLLELRTTLRQLDGQDP 650 Query 643 GAQSSVRKLIGVRYRQALAEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVA 702 G SSVRKL+GVR RQ +AE+ ME+ G VE +FLNTRCL+IAGGT QILLTVA Sbjct 651 GPASSVRKLVGVRQRQNVAEFAMELGGTAGWVEGPLSREFLNTRCLSIAGGTTQILLTVA 710 Query 703 AERLLGLPR 711 AER+LGLPR Sbjct 711 AERILGLPR 719 >gi|312138117|ref|YP_004005453.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|311887456|emb|CBH46768.1| putative acyl-CoA dehydrogenase [Rhodococcus equi 103S] Length=683 Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/684 (59%), Positives = 482/684 (71%), Gaps = 29/684 (4%) Query 55 LAGLGLFGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSA- 113 +A LGLF V VPE GG GG + DL AM++++A LV GPV TA+A LV+ +A Sbjct 1 MAQLGLFAVGVPESVGGVGGQVVDLAAMLEQSAVELVGGPVLPTALAGLVLGRCDGAAAK 60 Query 114 -----LASGERFAGVAIDG-GVQVDPKTS---TASGTVGRVLGGAPGGVVLLPA----DG 160 +A GE V +D ++ P +G G LGG PG VL+PA D Sbjct 61 AWAGQIAEGELPVSVVLDAPALEATPDADGGLVLAGDAGNALGGEPGVAVLVPARSGADV 120 Query 161 NWLLVDTACDEVVVEPLRATDFSLPLARMVLTSAPVT----VLEVSGERVEDLAATVLAA 216 W LVD A + VEPL D S +AR+ VT V V+ + V DLAAT++AA Sbjct 121 VWCLVDGAATGLTVEPLDILDKSRAVARIRFDGVAVTPDRVVTGVAPDLVRDLAATLVAA 180 Query 217 EAAGVARWTLDTAVAYAKVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAAD 276 EAAGVA W+L TAV YAK+REQFGKPIGSFQA+KHLCA+MLCR EQA A DAA AA D Sbjct 181 EAAGVAGWSLRTAVEYAKIREQFGKPIGSFQAIKHLCAEMLCRVEQARAVAWDAAVAAED 240 Query 277 ---------SDGTQLSIAAAVAASIGIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAH 327 S ++L +AAAVAA++ +DAA NAKDCIQ+LGGIG TWEHDAH YLRRA Sbjct 241 ALPDPDTGRSGTSELPVAAAVAAAVALDAAVQNAKDCIQILGGIGFTWEHDAHFYLRRAV 300 Query 328 GIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLAEVAGLRPEIAAAVAEVAALPEEKRQVA 387 FLGGS W RVT LT+AG RR L +DL+++ R I VA +AA+P+ +R+VA Sbjct 301 SNKQFLGGSNVWRARVTELTRAGARRHLTIDLSDLESERAAIRDEVAALAAVPDAERRVA 360 Query 388 LADTGLLAPHWPAPYGRGASPAEQLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQI 447 +A++G APHWP PYGRGAS AEQ+LI +E+AAA VERPDLVIGWWA PT+LEHG+PEQI Sbjct 361 VAESGYAAPHWPRPYGRGASAAEQILIAEEMAAAGVERPDLVIGWWAVPTVLEHGSPEQI 420 Query 448 ERFVPATMRGEFLWCQLFSEPGAGSDLASLRTKAVRADGGWLLTGQKVWTSAAHKARWGV 507 ERF T+RGE WCQLFSEPGAGSDLASLRT A + DGGW L GQKVWTS A +A WG+ Sbjct 421 ERFALPTLRGEITWCQLFSEPGAGSDLASLRTVAEKVDGGWKLNGQKVWTSLAREADWGI 480 Query 508 CLARTDPDAPKHKGITYFLVDMTTPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAV 567 CLARTD DAPKHKGITYF++DM TPGI I PLREITGD+LFNEVFLD+VF+PD+ VVG V Sbjct 481 CLARTDKDAPKHKGITYFVLDMKTPGIRISPLREITGDALFNEVFLDDVFIPDDCVVGEV 540 Query 568 NDGWRLARTTLANERVAMATGTALGNPMEELLKVLGDMELDVAQQDRLGRLILLAQAGAL 627 N GW+LARTTLANERVAM+ G++LG +E+LL++ G E D D LG LI A G+L Sbjct 541 NGGWKLARTTLANERVAMSGGSSLGKAVEDLLELAG--EPDAVTADHLGALISEALVGSL 598 Query 628 LDRRIAELAVGGQDPGAQSSVRKLIGVRYRQALAEYLMEVSDGGGLVENRAVYDFLNTRC 687 L+ R + GQDPG SSVRKL+GVR RQ +AE+ +E++ G VE +FLNTRC Sbjct 599 LELRTTLRQLDGQDPGPASSVRKLVGVRNRQGVAEFAVELAGEAGWVEGPLTREFLNTRC 658 Query 688 LTIAGGTEQILLTVAAERLLGLPR 711 L+IAGGT QILLTVAAE+LLGLPR Sbjct 659 LSIAGGTTQILLTVAAEQLLGLPR 682 >gi|54022412|ref|YP_116654.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] gi|54013920|dbj|BAD55290.1| putative acyl-CoA dehydrogenase [Nocardia farcinica IFM 10152] Length=713 Score = 608 bits (1569), Expect = 7e-172, Method: Compositional matrix adjust. Identities = 387/724 (54%), Positives = 478/724 (67%), Gaps = 43/724 (5%) Query 16 VRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFGVAVPEDCGGAGGS 75 +RGWA + A +R GF WR + LA LG+F VAV E+ GGAG + Sbjct 1 MRGWAGSVRP----IATMRAEPEGF-------WRGYWPALADLGVFRVAVAEEAGGAGAT 49 Query 76 IEDLCAMVDEAARALVPGPVATTAVATLVVS-----DPKLRSALASGERFAGVAIDG--- 127 + DL ++++AA LV GPV TTA+A LV S D AL + + VA G Sbjct 50 VADLAVLLEQAAHDLVGGPVLTTALANLVTSGALAEDLPCGVALDTLDTLDSVAETGFSP 109 Query 128 -GVQVDP---KTSTASGTVGRVLGGAPGGVVLLP---ADGN-WLLVDTACDEVVVEPLRA 179 Q P +T + SG+ VLG APG VLLP ADG W L+ + VEPLR Sbjct 110 ESAQSLPALAETGSLSGSWPLVLGAAPGTAVLLPVRSADGRRWCLLPPDAPGLRVEPLRP 169 Query 180 TDFSLPLARMVLTSAPVTVLEV--SGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVRE 237 TD S PLA + PVT +V + RVEDL + AAE AG+A W L+TAV YAKVRE Sbjct 170 TDPSTPLAAVHCAETPVTAGQVFTAPHRVEDLLVVLAAAELAGLAGWCLETAVDYAKVRE 229 Query 238 QFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAA 297 QFG+ IGSFQAVKH+CA MLCR E A DAA A + G +L IAAA+AA+I +DAA Sbjct 230 QFGRKIGSFQAVKHICAWMLCRTELIRAVALDAAAAVDEG-GAELPIAAAIAAAIALDAA 288 Query 298 KANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGV 357 AKDCIQVLGGIG TWEHDAH YLRRA + LGGS RW RVT LT+AG RR G Sbjct 289 VETAKDCIQVLGGIGFTWEHDAHFYLRRATALRQLLGGSARWRARVTELTRAGHRRTTGA 348 Query 358 DLAEVA-GLRPEIAAA------VAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAE 410 D A G++ + AAA VA +AALP E+++ AL D GL+ PHWP PYGRGA P Sbjct 349 DRVLAADGVQVDGAAATGLAREVAAIAALPAEQQRAALVDAGLVMPHWPPPYGRGADPMT 408 Query 411 QLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGA 470 L+I +EL A + PDL IG WA PT+L+HGT EQI+RF T+ GE +WCQLFSEP A Sbjct 409 GLMISEELRRAGLAAPDLAIGGWAIPTLLQHGTQEQIDRFAWPTLHGEVVWCQLFSEPEA 468 Query 471 GSDLASLRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMT 530 GSDLA+LRT A R DGGW L GQKVWTS +A W +CLARTD +APKH+GI+YFLVDM Sbjct 469 GSDLAALRTTATRVDGGWRLRGQKVWTSLGDRANWAICLARTDAEAPKHRGISYFLVDMK 528 Query 531 TPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTA 590 +PG+E+RPL +ITG++ F+EVFLD+VFVPD+ +VGA+N+GW++AR+TL+ ER+AM G Sbjct 529 SPGLEVRPLVQITGEARFSEVFLDDVFVPDDCLVGALNNGWKIARSTLSAERIAMG-GNG 587 Query 591 LGNPMEELLKVL---GDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSS 647 +G +EEL+ L G +A DRLG + A G LL++R A + G D GAQSS Sbjct 588 IGPALEELIAKLPATGPGAELIA--DRLGGFVADAIGGLLLEQRAALTVLAGGDAGAQSS 645 Query 648 VRKLIGVRYRQALAEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLL 707 VRKL+GVR+RQA+AE+ +EV+ G E V +FL TRCL+IAGGTEQILLTVAAER+L Sbjct 646 VRKLVGVRHRQAVAEFAVEVAGPLGAQETAEVTEFLLTRCLSIAGGTEQILLTVAAERIL 705 Query 708 GLPR 711 GLPR Sbjct 706 GLPR 709 >gi|300784408|ref|YP_003764699.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|299793922|gb|ADJ44297.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei U32] gi|340525829|gb|AEK41034.1| acyl-CoA dehydrogenase [Amycolatopsis mediterranei S699] Length=684 Score = 600 bits (1548), Expect = 2e-169, Method: Compositional matrix adjust. Identities = 377/666 (57%), Positives = 457/666 (69%), Gaps = 27/666 (4%) Query 51 VFAGLAGLGLFGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSD--- 107 + AG A LGLFGVA+P GGA GS+ DL A + AA LVPGPV +TA+A L+++D Sbjct 40 IPAGFAALGLFGVALPAAAGGADGSVADLAAGLAAAAEELVPGPVLSTALAGLLLADVPQ 99 Query 108 -PKLRSALASGERFAGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVD 166 +L ALA GE V +D S G G V G A G +L P DG +L+ Sbjct 100 AKELLPALAEGEATVAVLLDA-------PSLDDGVTGPVPGAAAGSWLLAPVDGGHVLLA 152 Query 167 TACDEVVVEPLRATDFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTL 226 V VEPL A DFS PLAR+ + +L + V LAAT+ AAEAAGVAR L Sbjct 153 PGTPGVSVEPLAAFDFSRPLARIRFSGVRGDLLTLP--PVAPLAATLAAAEAAGVARRCL 210 Query 227 DTAVAYAKVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAA 286 AV YA+VREQFGKPIG+FQA+KHLCA+MLCRAE A+ A DAA Q ++ Sbjct 211 TVAVEYARVREQFGKPIGAFQAIKHLCAEMLCRAEAAEALAWDAASG-------QHPLSV 263 Query 287 AVAASIGIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTAL 346 A AA + +DAA ANAKDC+QVLGGIG TWEHDAHLYLRRA + +LGGS W RR +L Sbjct 264 ASAAVVALDAAVANAKDCVQVLGGIGFTWEHDAHLYLRRAVALRQWLGGS--WRRRAASL 321 Query 347 TQAGVRRRLGVDLAEVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGA 406 G R LGVD+ + LR E VA +A LP ++VALAD GLL PHWPAPYGRGA Sbjct 322 ALPGTERTLGVDVGDDPALRDE----VARIAELPPASQRVALADAGLLTPHWPAPYGRGA 377 Query 407 SPAEQLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFS 466 AEQL ID LA+A V RPDLVIG WA PTILEHG+ EQ RF T+RGE WCQLFS Sbjct 378 DAAEQLRIDFVLASAGVRRPDLVIGAWAVPTILEHGSDEQRARFARPTLRGELTWCQLFS 437 Query 467 EPGAGSDLASLRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFL 526 EPGAGSDLA+LRT A R +GGW L+GQKVWTS A +A WG+CLARTDP APKH+GITYFL Sbjct 438 EPGAGSDLAALRTAARRVEGGWRLSGQKVWTSLAREADWGICLARTDPAAPKHQGITYFL 497 Query 527 VDMTTPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMA 586 VDM GI RPLREITG+++FNEVFLD+VFVPD VVG+ GWRLARTTLANERVA+ Sbjct 498 VDMRADGITTRPLREITGEAVFNEVFLDDVFVPDADVVGSPGGGWRLARTTLANERVAIG 557 Query 587 TGTALGNPMEELLKVLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQS 646 +G+A+G ++ L+ + LD DRLG L+ AG++LD R A + GQDPGA+S Sbjct 558 SGSAVGESVQALVSTMDASALDDVALDRLGVLVADGVAGSVLDLRAALRRLEGQDPGAES 617 Query 647 SVRKLIGVRYRQALAEYLMEVSDGGGLV-ENRAVYDFLNTRCLTIAGGTEQILLTVAAER 705 SVRKL+GV++RQ +AE+ +E++ G L+ + ++FL TRCL+IAGGT Q+L ++ AER Sbjct 618 SVRKLLGVQHRQDVAEFALELAGAGALLADGSPQHEFLLTRCLSIAGGTTQVLRSLTAER 677 Query 706 LLGLPR 711 LLGLPR Sbjct 678 LLGLPR 683 >gi|319948639|ref|ZP_08022763.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4] gi|319437720|gb|EFV92716.1| acyl-CoA dehydrogenase [Dietzia cinnamea P4] Length=723 Score = 596 bits (1536), Expect = 6e-168, Method: Compositional matrix adjust. Identities = 363/727 (50%), Positives = 466/727 (65%), Gaps = 31/727 (4%) Query 6 TDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFGVAV 65 T +Q+ + ++ WA++A A VR +E + +AW+ V+ LA LGLFGVAV Sbjct 6 TPDQTEIQSSIKAWAKSADP----VATVR-----VQEEDPEAWKAVWPQLAELGLFGVAV 56 Query 66 PEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERFA---- 121 E+ GGAG I DL M++ AA + PGPV +TA+ ++VS A A GE A Sbjct 57 AEEHGGAGAEIVDLACMLETAAAHMAPGPVLSTALTGVLVSRAGGPVAQALGETLAEGGL 116 Query 122 --GVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPA--DG--NWLLVDTACDEVVVE 175 GV + G + +G G GG P G +LLP DG W L++ V V Sbjct 117 PVGVCLGIGTATLDGSGEVTGDPGIAYGGTPDGGLLLPVEVDGATRWALLEAGTAGVTVT 176 Query 176 PLRATDFSLPLARMVLTSAPVT---VLE-VSGERVEDLAATVLAAEAAGVARWTLDTAVA 231 P D S + R+ L + +LE ++ E V L + AAEAAGVA +TL TAV Sbjct 177 PSTPYDISASIGRVRLEGVTILADRLLEGITTEHVHQLFVALAAAEAAGVADYTLATAVD 236 Query 232 YAKVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGT--QLSIAAAVA 289 YAK+REQFG+ IGSFQ++KHL A MLCR EQ A DAA AA D T +L +AAAVA Sbjct 237 YAKIREQFGRTIGSFQSIKHLAADMLCRTEQVRALAWDAAVAAEDLTATDSELPVAAAVA 296 Query 290 ASIGIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQA 349 ++ D A N++DCIQ+LGGIG T+EH+AH Y+RRA + +GGS RW R + LT A Sbjct 297 GALAFDNAVRNSQDCIQILGGIGFTFEHEAHFYMRRASALRQIIGGSARWRRSLAELTLA 356 Query 350 GVRRRLGVDLAEVAGL---RPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGA 406 G RR L +DL+E+ GL R EI A VA+VAA+ + R+ ALADTGL PH P P+G GA Sbjct 357 GRRRHLDIDLSEIDGLDAKREEIRALVAKVAAVEGDGRKQALADTGLFMPHLPEPWGLGA 416 Query 407 SPAEQLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFS 466 PAEQLLID+EL AA V R D+ IG WA PTIL+ PE + V TM G+ WCQLFS Sbjct 417 GPAEQLLIDEELEAAGVTRHDITIGGWAVPTILQ-AAPEHADLLVRDTMAGKIRWCQLFS 475 Query 467 EPGAGSDLASLRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFL 526 EPGAGSDLA+LRT A + DGGW L GQKVWTS A +A W +CLARTD APKHKGITYFL Sbjct 476 EPGAGSDLAALRTTAEKVDGGWKLNGQKVWTSLAREADWAMCLARTDSGAPKHKGITYFL 535 Query 527 VDMTTPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMA 586 VDM + GI RPLREITG++LFNEV+L+++FVPDE +G VNDGW++ARTTLANERVAM Sbjct 536 VDMRSEGIRTRPLREITGEALFNEVYLEDLFVPDEFQIGTVNDGWKIARTTLANERVAMG 595 Query 587 TGTALGNPMEELLKVLG--DMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGA 644 G++LG+ EE++ ++ + D D G+ + G LLD R A ++ G PGA Sbjct 596 GGSSLGDAAEEIIGLINAAGVSGDALVLDEFGKHVADGVVGNLLDLRTALRSLAGSGPGA 655 Query 645 QSSVRKLIGVRYRQALAEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAE 704 +SSVRK++GVR+RQ +AE+ + ++ GG+ FL RCL+IAGGTEQ+LL V E Sbjct 656 ESSVRKIVGVRHRQDIAEFGLTLTGTGGVEFTEQGRKFLMVRCLSIAGGTEQVLLNVVGE 715 Query 705 RLLGLPR 711 R+LGLPR Sbjct 716 RILGLPR 722 >gi|302525633|ref|ZP_07277975.1| FadE34 [Streptomyces sp. AA4] gi|302434528|gb|EFL06344.1| FadE34 [Streptomyces sp. AA4] Length=666 Score = 587 bits (1512), Expect = 3e-165, Method: Compositional matrix adjust. Identities = 368/659 (56%), Positives = 444/659 (68%), Gaps = 35/659 (5%) Query 54 GLAGLGLFGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSA 113 G A LGL G+A+P GA G++ DL A + AA ALVPGP+ +TA+A L++++ Sbjct 42 GFAALGLTGIALPASVNGADGTVADLAAGLAAAAEALVPGPLLSTALAGLLLAE------ 95 Query 114 LASGERFAGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVV 173 + A DG QV + ++ V G +L+P ++LV Sbjct 96 --HAKELAAEIADGTAQVAVQLEESA----TVPGADAESWLLVPRGDRYVLVPPG---TA 146 Query 174 VEPLRATDFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYA 233 VEPL DFS L R V A VL++ V DLAAT+ AEAAGVARW L TAV YA Sbjct 147 VEPLAPFDFSRSLGR-VKADARGEVLDLPD--VRDLAATLAVAEAAGVARWCLTTAVEYA 203 Query 234 KVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIG 293 KVREQFG+ IG+FQAVKHLCA+MLCR E A+ A DAA + +D +A A AA++ Sbjct 204 KVREQFGQVIGAFQAVKHLCAEMLCRTEAAEALAWDAASSVSDP------LAVASAAAVA 257 Query 294 IDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRR 353 +DAA NAKDCIQVLGGIG TWEH+AHLYLRRA + +LGGS RW +R L AG RR Sbjct 258 LDAAVENAKDCIQVLGGIGFTWEHEAHLYLRRALALRQWLGGSQRWRKRAADLALAGKRR 317 Query 354 RLGVDLAEVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLL 413 LGV++ E A E+ VAE+AA PEEKR+ ALAD+GLLAPHWP PYG GA A QL Sbjct 318 TLGVNVGEDA----EVTRLVAEIAAQPEEKRRTALADSGLLAPHWPQPYGLGADAATQLR 373 Query 414 IDQELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSD 473 ID L AA + RPDLVIG WA PTIL HGT +Q ERF T+RGE WCQLFSEPGAGSD Sbjct 374 IDAALTAADIRRPDLVIGGWAVPTILAHGTDDQRERFAKPTLRGEVTWCQLFSEPGAGSD 433 Query 474 LASLRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPG 533 LASLRT A R DGGW LTGQKVWTS AH+A W +CLARTDPD PKHKGITYFLVDM G Sbjct 434 LASLRTVARRTDGGWRLTGQKVWTSLAHEADWAICLARTDPDVPKHKGITYFLVDMRADG 493 Query 534 IEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGN 593 I RPLREITG S+FNEVFLD+VFVPD VVG GW+LARTTLANERVA+ G+A+G Sbjct 494 ITTRPLREITGRSVFNEVFLDDVFVPDADVVGEPGAGWKLARTTLANERVALGRGSAVGE 553 Query 594 PMEELLK-VLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLI 652 +E LL+ GD++ +DRLG LI A ++LD R + G PGA+SSV KL+ Sbjct 554 NVEALLESAPGDVD-----RDRLGTLIGQGSACSVLDLRATLRRLDGLGPGAESSVAKLL 608 Query 653 GVRYRQALAEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 GVR+RQ AE+ +E++ + E +A +FL TRCL+IAGGT Q+LL+ AAER+LGLPR Sbjct 609 GVRHRQETAEFALELAP-ELVAETQAAQEFLLTRCLSIAGGTTQVLLSAAAERVLGLPR 666 >gi|343925842|ref|ZP_08765357.1| hypothetical protein GOALK_050_01370 [Gordonia alkanivorans NBRC 16433] gi|343764193|dbj|GAA12283.1| hypothetical protein GOALK_050_01370 [Gordonia alkanivorans NBRC 16433] Length=704 Score = 575 bits (1483), Expect = 7e-162, Method: Compositional matrix adjust. Identities = 348/695 (51%), Positives = 426/695 (62%), Gaps = 34/695 (4%) Query 46 DAWRPVFAGLAGLGLFGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVV 105 D W +F LA G+F AVPE GG G D+ AMV++ LVPGPV T A + + Sbjct 14 DQWTQLFGQLADFGVFAAAVPEASGGLGAGFVDVAAMVEQCGIELVPGPVVPTVTAAIAL 73 Query 106 SDPKLRSALASGERFAGVAIDGGVQ-VDPKTSTASGTVGRV--------LGGAPGGVVLL 156 S SA A + ++G + V P S A G + +GG GV +L Sbjct 74 S----TSADARAQALLDQVLEGALPIVTPVASHAGGAAAPLSDAIDLGLVGGYSEGVAVL 129 Query 157 PA------DGNWLLVDTACDEVVVEPLRATDFSLPLARMVLT--SAPVTVLEVSGERVED 208 A +G W ++ + P D + +AR+ LT +A V VE Sbjct 130 AALDVPGREGRWWILPPNVGSADIAPETPLDGTTSVARVRLTGVTADDLVELPDAPLVEG 189 Query 209 LAATVLAAEAAGVARWTLDTAVAYAKVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAA 268 L + LAA +GV RWTLDTAV YAKVR QFG PIGSFQA+KH+CA+MLCR+E+ A Sbjct 190 LLSATLAAYQSGVTRWTLDTAVDYAKVRTQFGAPIGSFQAIKHICAEMLCRSEEVTAVAW 249 Query 269 DAARAA-----ADSDG-----TQLSIAAAVAASIGIDAAKANAKDCIQVLGGIGCTWEHD 318 D A A A SD QL I+ A + A A AKDCIQVLGGIG T+EHD Sbjct 250 DVAGAVDEVLNASSDELASAREQLEISRLAADVVVAQAPAATAKDCIQVLGGIGFTFEHD 309 Query 319 AHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLAEVAGLRPEIAAAVAEVAA 378 AHLYLR A L + + AG RRR +DL++V R E+ VA +AA Sbjct 310 AHLYLRSALAAQAALDHAHDAATALADRGLAGARRRFALDLSQVEDKRNEVRETVARIAA 369 Query 379 LPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAAAKVERPDLVIGWWAAPTI 438 + ++ LA+TG L PHWPAPYG GA A QLLID EL AA V RPDLVIG WA PTI Sbjct 370 ADADDQRRVLAETGYLTPHWPAPYGLGADAALQLLIDTELDAAGVVRPDLVIGAWAIPTI 429 Query 439 LEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTKAVRADGGWLLTGQKVWTS 498 L HGT Q ERFV T+ GE +WCQLFSEP AGSDLA+LRTKA R DGGW L+GQK+WTS Sbjct 430 LSHGTDAQRERFVAPTLAGEIVWCQLFSEPEAGSDLAALRTKAERVDGGWSLSGQKIWTS 489 Query 499 AAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLREITGDSLFNEVFLDNVFV 558 AH A+W +CLARTD +APK+KGITYFLVDM++PGI+IRPLRE+TG + FNEVFLD+V V Sbjct 490 QAHNAQWAICLARTDAEAPKNKGITYFLVDMSSPGIDIRPLRELTGRANFNEVFLDDVVV 549 Query 559 PDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLKVLGDMELDVAQQDR--LG 616 PD+ +VG VN+GWRLARTTLANERVAM G+ LG ME LL+ + M D++ +R LG Sbjct 550 PDDCMVGEVNNGWRLARTTLANERVAMG-GSGLGKEMESLLRQVQGMTRDLSDAERVALG 608 Query 617 RLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQALAEYLMEVSDGGGLVEN 676 A G +LD R A + G DPGA SSVRKLIGV++RQ++ + + + GL Sbjct 609 SQFADAHVGRVLDARAATQQLAGLDPGALSSVRKLIGVQHRQSVPDLALRLLGVQGLAAT 668 Query 677 RAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 A L RCL+IAGGT QIL T AAER+LGLPR Sbjct 669 DASDAVLQNRCLSIAGGTTQILKTAAAERILGLPR 703 >gi|111022779|ref|YP_705751.1| acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] gi|110822309|gb|ABG97593.1| possible acyl-CoA dehydrogenase [Rhodococcus jostii RHA1] Length=742 Score = 575 bits (1482), Expect = 1e-161, Method: Compositional matrix adjust. Identities = 346/741 (47%), Positives = 460/741 (63%), Gaps = 45/741 (6%) Query 5 VTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVF-AGLAGLGLFGV 63 +T+E+ R+ VRGWA + A AV E E+ RP+F LA LG+ G+ Sbjct 5 LTEEERDLRDSVRGWATRTVTPAVLREAV---EAKTEQ------RPLFWKSLADLGVLGL 55 Query 64 AVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLR---SALASGERF 120 +PED GGAG + +L + +E R L+PGP T + V+ + S +A G Sbjct 56 HLPEDVGGAGCGLVELAVVTEELGRVLLPGPFLPTVLLGAVLHESGRTGELSGVADGSTL 115 Query 121 AGVAIDGG---VQVDPKTSTASGTVGRVLGGAPGGVVLLPA-DGN-WLLVDTACDEVVVE 175 VA+ G + D T G G VLGG G + LL A DG+ + V A D + V Sbjct 116 GAVALQPGSLRLVRDGGVVTLDGESGYVLGGQVGDLFLLAATDGDETVYVVVARDRLDVT 175 Query 176 PLRATDF---SLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAY 232 L + D S A L A V VL++ +RV DLAAT+ AAEA+GVA W + TA Y Sbjct 176 DLPSHDVVRRSATAAANRLAIAEVDVLQIDSQRVRDLAATLFAAEASGVADWAVTTAADY 235 Query 233 AKVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAV---- 288 A VR QFG+PIG FQ VKH A+MLC AEQA V A DAARA + G+ A AV Sbjct 236 ANVRHQFGRPIGQFQGVKHRVARMLCLAEQARVCAWDAARAM--NPGSSARAATAVPRCS 293 Query 289 ----------AASIGIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGR 338 A + DAA A KDCIQVLGGIG TWEHDAHLYLRRA + LG + Sbjct 294 APEASLAAAVAGATAPDAAFAVTKDCIQVLGGIGYTWEHDAHLYLRRAQSLRILLGSTAS 353 Query 339 WLRRVTALTQAGVRRRLGVDL-AEVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPH 397 W RRV T G RR LG+DL ++ +R ++ A +A AA+ E +R+ LA+ G APH Sbjct 354 WRRRVARATLGGARRVLGIDLPSDAEDIRADVVAELAPAAAMGEAERRTYLAEKGYTAPH 413 Query 398 WPAPYGRGASPAEQLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRG 457 P P+GRGA EQL+I +EL AA ++ D++IG W PT++ HG+ EQ++RFVP ++RG Sbjct 414 LPTPWGRGAGAVEQLVIAEELRAAALKPHDMIIGNWVVPTLIAHGSEEQLQRFVPPSLRG 473 Query 458 EFLWCQLFSEPGAGSDLASLRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAP 517 + +WCQLFSEPGAGSDLA L T+A + DGGW+L GQKVWTS A A WG+CLARTD P Sbjct 474 DLVWCQLFSEPGAGSDLAGLTTRATKVDGGWVLQGQKVWTSMARDADWGICLARTDGSVP 533 Query 518 KHKGITYFLVDMT-TPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLART 576 KHKG++YFL+DM+ + G++IRPLREITG++LFNEVFLD+VFVPDE++VG DGW+LART Sbjct 534 KHKGLSYFLIDMSGSDGLDIRPLREITGEALFNEVFLDDVFVPDELLVGEPGDGWKLART 593 Query 577 TLANERVAMATGTALGNPMEELLKVLGDME--LDVAQQDRLGRLILLAQAGALLDRRIAE 634 TLANERV+++ ++LG+ E LL + G++ +D Q LG+++ AQ+G L+ R Sbjct 594 TLANERVSLSHDSSLGSGGEALLTLAGELPGGIDEEQLTVLGKVLCDAQSGGLMGLRTTL 653 Query 635 LAVGGQDPGAQSSVRKLIGVRYRQALAEYLMEVSDGGGLVENR----AVYDFLNTRCLTI 690 + G PGA+SSV KL+GV + Q + E M+ + L+ ++ A FLN++C++I Sbjct 654 RTIAGGQPGAESSVAKLLGVEHIQQVWEVAMDWAGPRALLGDQPRTSATQMFLNSQCMSI 713 Query 691 AGGTEQILLTVAAERLLGLPR 711 AGGT + L + ERLLGLPR Sbjct 714 AGGTTNVQLNIIGERLLGLPR 734 >gi|269126411|ref|YP_003299781.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268311369|gb|ACY97743.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM 43183] Length=732 Score = 570 bits (1470), Expect = 3e-160, Method: Compositional matrix adjust. Identities = 342/738 (47%), Positives = 443/738 (61%), Gaps = 47/738 (6%) Query 5 VTDEQSAARELVRGWA-RTAASGAAATAAVRDMEYGFEEGNADAWRPVF-AGLAGLGLFG 62 +T+E A E VRG+A R ++ TA D E RP F LA GL G Sbjct 5 LTEEHEALAESVRGFAERNISTQVVRTALDADTES----------RPAFWPALAEQGLLG 54 Query 63 VAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVS-------DPKLRSALA 115 + +PE+ GG G + +L ++E RA PGP T +A+ ++ +L ALA Sbjct 55 LHLPEEHGGQGFGLLELAVTLEELGRAAAPGPFLPTVLASAAINACGNAKAKAELLPALA 114 Query 116 SGERFAGVAIDGGV--QVDPKTSTASGTVGRVLGGAPGGVVLLPADGN----WLLVDTAC 169 G + +A+ + + D SG VLG A V++LP + W+ +D A Sbjct 115 DGSKTGALALTAELTGRRDGDALVISGAAEPVLGAALADVIVLPVATDQGEEWVALDAAD 174 Query 170 DEVVVEPLRATDFSLPLARMV-------LTSAPVTVLE-VSGERVEDLAATVLAAEAAGV 221 V P SL R V LT A VL+ + G V++LAA +L AEAAGV Sbjct 175 LTVTAVP------SLDKVRRVAKVEAAELTVAADRVLDGLKGRDVQNLAAVLLGAEAAGV 228 Query 222 ARWTLDTAVAYAKVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQ 281 A W + TA YAKVREQFG+PIG FQ VKH A+ML EQA A DAA A D G Q Sbjct 229 ASWCVTTAAEYAKVREQFGRPIGQFQGVKHKAARMLIALEQARAAVWDAAVALGDEPGPQ 288 Query 282 LSIAAAVAASIGIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLR 341 + AAAVA +I +AA ++DCIQ+LGGIG TWEHDAH+YLRRA + LG + W Sbjct 289 VEFAAAVAGTIAPEAAVQTSRDCIQILGGIGFTWEHDAHIYLRRALTLRALLGPAKDWAA 348 Query 342 RVTALTQAGVRRRLGVDLAE-VAGLRPEIAAAVAEVAALPEEKR-QVALADTGLLAPHWP 399 V L G RR + ++L E LR I A VAE+AA+ + K + D G PH+P Sbjct 349 TVATLALDGHRRPIELELGEDTQPLRERIRAEVAELAAITDRKELNAKMGDEGWTMPHFP 408 Query 400 APYGRGASPAEQLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEF 459 P+GRGA P EQ+LI QEL AA V+ P +VIG W P+++ +GT EQ ERF+ T+RGE Sbjct 409 KPWGRGAGPVEQILIAQELKAAGVKPPSMVIGAWLVPSLVAYGTEEQKERFLRPTLRGEM 468 Query 460 LWCQLFSEPGAGSDLASLRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKH 519 +WCQLFSEPGAGSDLASL KA R +GGW LTGQK+WTS A A WG CLARTDP+APKH Sbjct 469 VWCQLFSEPGAGSDLASLSMKAERVEGGWKLTGQKIWTSMAQMAEWGFCLARTDPEAPKH 528 Query 520 KGITYFLVDMTTPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLA 579 +GITYFLVDM +PG+E+RPLRE+TGD+LFNEVFLD VFVPD+ VVG VN+GW++AR TL+ Sbjct 529 EGITYFLVDMKSPGVEVRPLRELTGDALFNEVFLDGVFVPDDCVVGKVNEGWKVARNTLS 588 Query 580 NERVAMATGTALGNPMEELLKVLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGG 639 NERV ++TG+ LG M++LLK ELD + +G+L+ + LL R + G Sbjct 589 NERVTLSTGSGLGMGMDDLLKFFQGTELDPVTRVEVGKLVAQGHSIDLLALRTTLKQLNG 648 Query 640 QDPGAQSSVRKLIGVRYRQALAEYLMEVSDGGGLVENRAVYD------FLNTRCLTIAGG 693 +PGA++SVRKL+GV++ Q +A+Y E A L +R +TI GG Sbjct 649 VEPGAEASVRKLLGVQFSQDVADYCWAAQGAAAATEVPAERSGIVGRAMLFSRAMTIYGG 708 Query 694 TEQILLTVAAERLLGLPR 711 T ++ L + AERLLGLPR Sbjct 709 TTEVQLNIIAERLLGLPR 726 >gi|333918573|ref|YP_004492154.1| putative acyl-CoA dehydrogenase [Amycolicicoccus subflavus DQS3-9A1] gi|333480794|gb|AEF39354.1| Possible acyl-CoA dehydrogenase [Amycolicicoccus subflavus DQS3-9A1] Length=716 Score = 570 bits (1469), Expect = 3e-160, Method: Compositional matrix adjust. Identities = 376/731 (52%), Positives = 467/731 (64%), Gaps = 45/731 (6%) Query 6 TDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFGVAV 65 TD Q A E VR WA A AA D + G+ + LA LGLFGVAV Sbjct 6 TDTQRALTEAVRTWAARAHPIDAARTG--DYQSGW------------SALASLGLFGVAV 51 Query 66 PEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVA-TLVVSDPKLRSA------LASGE 118 PE+ GGAGG+ D A ++ AA AL PGPV TT +A TL+ P +A L G Sbjct 52 PEELGGAGGTTTDAAAGLEAAATALAPGPVFTTLLAATLLGRAPDAPAAKEAVPELVEGS 111 Query 119 RFAGVAIDGGVQVDPKTSTAS-----GTVGRVLGGAPGGVVLLP---ADGN-WLLVDTAC 169 A VAI + ++S + G++ V G +L P A+G W+L+ Sbjct 112 ATAAVAIGSHGVLRAESSGGTELVLRGSLEFVPGATSESYILAPIVTAEGEVWVLIPPGT 171 Query 170 DEVVVEPLRATDFSLPLARMVLTSA---PVTVL-EVSGERVEDLAATVLAAEAAGVARWT 225 +V V L+A D S + + + A P V+ E++ RV D+AA AAEAAGVA W Sbjct 172 ADVHVTKLQAFDLSTVVGNVDIDGAVLAPAAVIPELATGRVRDVAAMFAAAEAAGVAAWC 231 Query 226 LDTAVAYAKVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIA 285 L TA YA+ REQFG IGSFQA+K LCA LCR E+A A A AAD G Q + + Sbjct 232 LATAAEYARTREQFGAKIGSFQAIKLLCATSLCRTEKAAALAW-DAARAADQSGEQFTFS 290 Query 286 AAVAASIGIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTA 345 AAVAA+ +DAA AKDCIQVLGGIG TWEHDAHLYLRRA + LGGS W +RV+ Sbjct 291 AAVAAAGALDAAVDTAKDCIQVLGGIGFTWEHDAHLYLRRAVALRQLLGGSAFWQQRVSE 350 Query 346 LTQAGVRRRLGVDLAEVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRG 405 L + GVRRR+ +DL+ V +I + VA +AA P +++ L + G PHWP P+G G Sbjct 351 LARNGVRRRIDIDLSAVEVDVDDIRSEVAAIAASPGPEQRRRLVEAGYFMPHWPKPFGLG 410 Query 406 ASPAEQLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLF 465 A+PA+Q++ID+EL AA + RP LVIG WAA TI+EHGT Q ERF+ T+ GE WCQLF Sbjct 411 ATPAQQIVIDRELDAAGITRPSLVIGGWAAATIMEHGTAAQHERFLWPTLLGEVTWCQLF 470 Query 466 SEPGAGSDLASLRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYF 525 SEP AGSDLASLRT+AVRADGGWLLTG K+WTS AH A W +CLARTDPDA KHKGIT+F Sbjct 471 SEPEAGSDLASLRTRAVRADGGWLLTGSKIWTSLAHDADWAICLARTDPDAAKHKGITFF 530 Query 526 LVDMTTPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAM 585 LVDM + GIEIRPLREITG+ FN+VFLDNVFVPDE VVG GW+LARTTLANERVAM Sbjct 531 LVDMESAGIEIRPLREITGEERFNQVFLDNVFVPDECVVGGEGSGWKLARTTLANERVAM 590 Query 586 ATGTALGNPMEELLKVLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQ 645 + LG +E LL L D+ D A +G L++ + A A+LD R + G+ PG + Sbjct 591 SGSATLGESLERLLG-LADLSGDAA----VGALVVDSVACAVLDLRAVVSQLDGRGPGPE 645 Query 646 SSVRKLIGVRYRQALAEYLMEVSDGGGLVEN----RAV-YDFLNTRCLTIAGGTEQILLT 700 SSVRKLIGV +RQ +AE +E+ G V + R++ ++FL TRCL+IAGGT +IL Sbjct 646 SSVRKLIGVAHRQDVAETALEMLGVQGAVADSETARSIQHEFLLTRCLSIAGGTTEILRN 705 Query 701 VAAERLLGLPR 711 VAAER+LGLPR Sbjct 706 VAAERILGLPR 716 >gi|226308589|ref|YP_002768549.1| hypothetical protein RER_51020 [Rhodococcus erythropolis PR4] gi|226187706|dbj|BAH35810.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=726 Score = 568 bits (1464), Expect = 1e-159, Method: Compositional matrix adjust. Identities = 330/726 (46%), Positives = 456/726 (63%), Gaps = 29/726 (3%) Query 5 VTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFGVA 64 +++E R+ VRGWA A+ A AV E + +++GLA GL G+ Sbjct 5 LSEEDRDLRDSVRGWAARHATPTAIREAV--------EAKVETRPQLWSGLAEQGLLGLH 56 Query 65 VPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALA---SGERFA 121 V E+ GGAG + +L +V+E R++VPG T V + V+SD + + LA G Sbjct 57 VAEEFGGAGYGLVELAIVVEELGRSMVPGTFLPTVVVSAVLSDAGVTAPLAGLVDGSTLG 116 Query 122 GVAIDGG---VQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLR 178 VA+ G + D T+T SGT ++LGG G V LL D ++L+ D + V L Sbjct 117 AVALQPGSLKIARDGDTATLSGTSSQILGGHVGDVFLLATDSGFVLL--GRDRLEVTDLA 174 Query 179 ATDFSLPLARMV---LTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKV 235 + D + + L A +L + +RV D+AAT+ AAEA+G+A W + T+ YAKV Sbjct 175 SYDVVRRNSEVTVDGLILADSEILTIDTQRVLDIAATLFAAEASGLADWAVTTSADYAKV 234 Query 236 REQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGT---QLSIAAAVAASI 292 R+QFG+PIG FQ VKH A+ML AEQA V A DAARA ++G + S+AAAVA + Sbjct 235 RQQFGRPIGQFQGVKHKAARMLALAEQARVCAWDAARALTPANGVGAEEASLAAAVAGAT 294 Query 293 GIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVR 352 ++A + +DCIQVLGGIG TWEHDAHLYLRRA + LG + W RRV LT AG R Sbjct 295 ALEAGFSVTRDCIQVLGGIGYTWEHDAHLYLRRAQSLRILLGSTASWRRRVAELTIAGTR 354 Query 353 RRLGVDLA-EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQ 411 R L ++L E +R ++ A + L ++ LA+ G APH+ AP+G+ A Q Sbjct 355 RVLSIELPPEAEAIRADVRAELGPALELEGAAQKTYLAEKGYTAPHFTAPWGKSADAVSQ 414 Query 412 LLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAG 471 L+I +EL AAK++ D++IG W PT++ HG EQ+ +FVP ++RG+ +WCQLFSEPGAG Sbjct 415 LVIAEELRAAKIKPHDMIIGNWVIPTLIAHGNEEQLAKFVPPSLRGDIVWCQLFSEPGAG 474 Query 472 SDLASLRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTT 531 SDLA+L TKA + DGGW L GQKVWTS A A WG+CLARTD DAPKHKG++YFL+D+ Sbjct 475 SDLAALSTKATKVDGGWKLQGQKVWTSMARDAHWGICLARTDADAPKHKGLSYFLIDIKN 534 Query 532 PGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTAL 591 G++IRPLREITG++LFNEVF D+VFVPDE +VG DGW+LARTTLANERV+++ ++L Sbjct 535 SGLDIRPLREITGEALFNEVFFDDVFVPDECLVGEPGDGWKLARTTLANERVSLSNDSSL 594 Query 592 GNPMEELLKVLGDME--LDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVR 649 G+ E LL ++ + +D Q LG+++ AQ+G LL R ++ G PGA+SSV Sbjct 595 GSGGEALLSLVDGLPGGIDDEQLTVLGKVLCDAQSGGLLGLRTTLRSLTGAQPGAESSVA 654 Query 650 KLIGVRYRQALAEYLMEVSDGGGLVENR----AVYDFLNTRCLTIAGGTEQILLTVAAER 705 KLIGV + Q + + ME + L+ + A FLN++C++IAGGT + L + ER Sbjct 655 KLIGVEHIQQVWDVAMEWAGPSSLLGEQHRMSATQMFLNSQCMSIAGGTTNVQLNIIGER 714 Query 706 LLGLPR 711 +LGLPR Sbjct 715 ILGLPR 720 >gi|325673067|ref|ZP_08152761.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] gi|325556320|gb|EGD25988.1| acyl-CoA dehydrogenase [Rhodococcus equi ATCC 33707] Length=734 Score = 566 bits (1459), Expect = 5e-159, Method: Compositional matrix adjust. Identities = 341/734 (47%), Positives = 459/734 (63%), Gaps = 37/734 (5%) Query 5 VTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAG-LAGLGLFGV 63 ++DE R+ VRGWA A+ AV E + RP + G LA LG+ G+ Sbjct 5 LSDEDRELRDSVRGWAARHATPTVIREAV--------EAKTET-RPSYWGSLAELGMLGL 55 Query 64 AVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSA----LASGER 119 +PE+ GGAG + +L + +E RA+VPGP TAV + V+++ R+A LA G Sbjct 56 HLPEEFGGAGYGLVELAIVTEELGRAMVPGPFLPTAVVSTVLNEAG-RTAELEGLADGSL 114 Query 120 FAGVAID-GGVQV--DPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLV-DTACDEVVVE 175 F VA++ GG+++ D +T SGT +LGG G V LL A + + VVV Sbjct 115 FGAVALEPGGLKLVRDGGKTTLSGTSSHILGGQVGDVFLLAASDDDTDAAEGGLSFVVVA 174 Query 176 PLRATDFSLPLARMVLTSAPVT----------VLEVSGERVEDLAATVLAAEAAGVARWT 225 R LP +V +A VT VLE+ +R+ D+AAT+ AAEA+G+A W Sbjct 175 RDRLDVTELPSHDVVRRNAEVTADGLELSDGDVLELDSQRILDIAATLFAAEASGLADWA 234 Query 226 LDTAVAYAKVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARA-AADSDGTQLSI 284 TA YA+VR+QFG+ IG FQ VKH A+M EQA V A DAARA D DG + S+ Sbjct 235 TTTAADYARVRQQFGRVIGQFQGVKHKAARMFSLTEQARVTAWDAARALGEDVDGAEASL 294 Query 285 AAAVAASIGIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVT 344 AAAVA ++ +++A KDCIQVLGGIG TWEHDAHLYLRRA + LG + W RRV Sbjct 295 AAAVAGAVALESAFQVTKDCIQVLGGIGFTWEHDAHLYLRRAQSLRILLGSTASWKRRVA 354 Query 345 ALTQAGVRRRLGVDLA-EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYG 403 LT G RR L +DL E +R ++ A + +L +++ LA+ G +PH PAP+G Sbjct 355 NLTIDGARRVLSIDLPPEAEQIRADVRAELEPATSLEGAEQKAYLAEKGYTSPHLPAPWG 414 Query 404 RGASPAEQLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQ 463 +GA QL+I +EL AA + D++IG W PT++ HG EQIERFVP ++RG+ +WCQ Sbjct 415 KGADAVTQLVIAEELRAAALVPHDMIIGNWVIPTLIAHGNAEQIERFVPQSLRGDIVWCQ 474 Query 464 LFSEPGAGSDLASLRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGIT 523 LFSEPGAGSDLA L TKA + DGGW L GQKVWTS A +A WG+CLARTD DAPKHKG++ Sbjct 475 LFSEPGAGSDLAGLSTKATKVDGGWKLNGQKVWTSMAREADWGICLARTDADAPKHKGLS 534 Query 524 YFLVDMTTPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERV 583 YFL+D+ G++IRPLREITG++LFNEVFLD+VFVPDE +V DGW+LARTTLANERV Sbjct 535 YFLIDIKNSGLDIRPLREITGEALFNEVFLDDVFVPDECLVAEPGDGWKLARTTLANERV 594 Query 584 AMATGTALGNPMEELLKVLGDME--LDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQD 641 +++ ++LG+ E LL + + LD Q LG+++ AQ+G L+ R ++ G Sbjct 595 SLSHDSSLGSGGEALLDLAVSIPGGLDDEQMTVLGKVLCDAQSGGLMGLRTTLRSLTGAQ 654 Query 642 PGAQSSVRKLIGVRYRQALAEYLMEVSDGGGLV----ENRAVYDFLNTRCLTIAGGTEQI 697 PGA+SS+ KL+GV + Q + E ME + L+ A FLN++C++IAGGT + Sbjct 655 PGAESSIAKLLGVEHIQQVWEVAMEWAGPSSLLGEQHRRSATQMFLNSQCMSIAGGTTNV 714 Query 698 LLTVAAERLLGLPR 711 L + ER+LGLPR Sbjct 715 QLNIIGERILGLPR 728 >gi|226365287|ref|YP_002783070.1| acyl-CoA dehydrogenase [Rhodococcus opacus B4] gi|226243777|dbj|BAH54125.1| putative acyl-CoA dehydrogenase [Rhodococcus opacus B4] Length=733 Score = 566 bits (1458), Expect = 5e-159, Method: Compositional matrix adjust. Identities = 343/728 (48%), Positives = 453/728 (63%), Gaps = 30/728 (4%) Query 5 VTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVF-AGLAGLGLFGV 63 +T+E+ R+ VRGWA + AV E E+ RP F LA LG+ G+ Sbjct 5 LTEEERDLRDSVRGWATRTVTPDVLREAV---EAKTEQ------RPSFWTSLAELGVLGL 55 Query 64 AVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLR---SALASGERF 120 +PE+ GGAG + +L + +E R L+PGP T + V+ + S LA G Sbjct 56 HLPEEAGGAGCGLVELAVVTEELGRVLLPGPFLPTVLLGAVLHESGRAGELSGLADGTTL 115 Query 121 AGVAIDGG---VQVDPKTSTASGTVGRVLGGAPGGVVLLPA-DGN-WLLVDTACDEVVVE 175 VA+ G + D T G G VLGG G + LL A DG+ + V D + V Sbjct 116 GAVALQPGSLRLVRDGGAVTLDGESGYVLGGQVGDLFLLAAADGDDTVFVALTPDRLGVT 175 Query 176 PLRATDFSLPLARMVLTS---APVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAY 232 L + D A +T A VL++ +RV DLAAT+ AAEA+GVA W + TA Y Sbjct 176 DLPSHDVVRRNATAAVTGLEIADADVLQIDAQRVLDLAATLFAAEASGVADWAVTTAADY 235 Query 233 AKVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASI 292 A+VR QFG+PIG FQ VKH A+ML AEQA V A DAARA G + AA A Sbjct 236 ARVRRQFGRPIGQFQGVKHRVARMLGLAEQARVCAWDAARAMNPGTGAAEASLAAAVAGA 295 Query 293 GI-DAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGV 351 ++A + KDCIQVLGGIG TWEHDAHLYLRRA + LG + W RRV T G Sbjct 296 TAPESAFSVTKDCIQVLGGIGYTWEHDAHLYLRRAQSLRILLGSTAFWRRRVARATLGGA 355 Query 352 RRRLGVDLA-EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAE 410 RR LG+DL E AGLR I A +A A+L EE+R LA+ G APH PAP+GRGA E Sbjct 356 RRVLGIDLPPEAAGLRAGIRAELAAAASLCEEERGTYLAEKGYTAPHLPAPWGRGAGAVE 415 Query 411 QLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGA 470 QL+I +EL AA ++ D++IG W PT++ HG+ +Q++RFVP ++RG+ +WCQLFSEPGA Sbjct 416 QLVIAEELRAAALKPHDMIIGNWVVPTLIAHGSDDQLQRFVPQSLRGDLVWCQLFSEPGA 475 Query 471 GSDLASLRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMT 530 GSDLA L T+A + DGGW+L GQKVWTS A A WG+CLARTD PKHKG++YFL+DM Sbjct 476 GSDLAGLTTRATKVDGGWVLRGQKVWTSMARDADWGICLARTDASVPKHKGLSYFLIDMK 535 Query 531 -TPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGT 589 + G++IRPLREITG++LFNEVFLD+VFVPDE++VG DGW+LARTTLANERV+++ + Sbjct 536 ASEGLDIRPLREITGEALFNEVFLDDVFVPDELLVGDPGDGWKLARTTLANERVSLSHDS 595 Query 590 ALGNPMEELLKVLGDME--LDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSS 647 +LG+ E LL + G++ +D Q LG+++ AQ+G L+ R ++ G PGA+SS Sbjct 596 SLGSGGEALLTLAGELPGGIDDEQLTVLGKVLCDAQSGGLMGLRTTLRSIAGGQPGAESS 655 Query 648 VRKLIGVRYRQALAEYLMEVSDGGGLVENRA----VYDFLNTRCLTIAGGTEQILLTVAA 703 V KL+GV + Q + E M+ + L+ +R FLN++C++IAGGT + L + Sbjct 656 VAKLLGVEHIQQVWEVAMDWAGPRALLGDRPRTSDTQMFLNSQCMSIAGGTTNVQLNIIG 715 Query 704 ERLLGLPR 711 ERLLGLPR Sbjct 716 ERLLGLPR 723 >gi|145595149|ref|YP_001159446.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora tropica CNB-440] gi|145304486|gb|ABP55068.1| acyl-CoA dehydrogenase domain protein [Salinispora tropica CNB-440] Length=751 Score = 563 bits (1452), Expect = 3e-158, Method: Compositional matrix adjust. Identities = 363/752 (49%), Positives = 461/752 (62%), Gaps = 54/752 (7%) Query 5 VTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFGVA 64 +T +Q A ++++R WA +GA A VR +E G W AGLA LG F +A Sbjct 5 MTADQVALQDVIRRWA----AGANVLATVRALENGPSSQADRHW----AGLASLGCFALA 56 Query 65 VPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDP-------KLRSALASG 117 VPE GG GG + +L A++++ LVPGPV T +ATL ++ P L LA+G Sbjct 57 VPEQLGGDGGRVSELAAVLEQVTVDLVPGPVMPTLLATLALAPPGQAPAATNLLPDLAAG 116 Query 118 ERFAGVAI-DGGVQVDPKTSTA---SGTVGRVLGGAPGGVVLLPADGNW----LLVDTAC 169 + GVA+ G + +P A +G V VLG +LL A+ ++DT Sbjct 117 KVSVGVALAPGALTAEPVAGGAYRVTGRVNAVLGAGSTTHLLLTANTGTETLSFVLDTEH 176 Query 170 DEVVVEPLRATDFSLPLARMVLTSA---PVTVLEVSGE-RVEDLAATVLAAEAAGVARWT 225 + V + DFS PLA +++ A P +L SG+ R+ + AA + + EAA VA W Sbjct 177 EGVRITARTPVDFSRPLADVLVVGALVEPGQLLSESGQDRLHNCAALLASVEAAAVASWC 236 Query 226 LDTAVAYAKVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIA 285 L TA +AKVR QF + IGSFQAV HLCA MLCRAE+A+ A DAARA D + +A Sbjct 237 LRTATEHAKVRRQFDQAIGSFQAVGHLCAGMLCRAERANAVAWDAARAY-DQTPEEFPLA 295 Query 286 AAVAASIGIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTA 345 AA AA+I +DAA NAKDCIQVLGGIG TWEHDAHLYLRRA + LG RW +R Sbjct 296 AAAAAAIALDAAVDNAKDCIQVLGGIGFTWEHDAHLYLRRALALRQLLGSGARWRQRCAE 355 Query 346 LTQAGVRRRL--------------------GVDLAEVAGLRPEIAAAVAEVAALPEEKRQ 385 LT AG RR + G ++ R + A + +A LPE +R+ Sbjct 356 LTLAGARRHVWAVGDEFRAATEAVAAPPSSGAEIDAEPVERVAVRAQLGAIAQLPEAERR 415 Query 386 VALADTGLLAPHWPAPYGRGASPAEQLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPE 445 LAD G LAPHWPAPYG ASPA QLLID+EL A + RPDL IG WA PTIL HG+ Sbjct 416 ARLADVGYLAPHWPAPYGIDASPARQLLIDEELDRAGIVRPDLAIGGWAVPTILRHGSAA 475 Query 446 QIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTKAVRADGGWLLTGQKVWTSAAHKARW 505 Q +RF ++RGE WCQLFSEP AGSDLASLRT+A R GGW L+GQKVWTS A +A W Sbjct 476 QRDRFAGPSLRGEITWCQLFSEPEAGSDLASLRTRANRVTGGWRLSGQKVWTSLAAEADW 535 Query 506 GVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVG 565 +CLARTDP A KH+G+TYFLVDM + GIEIRPLREITG S+FNEVFLD+VFVPDE VVG Sbjct 536 AICLARTDPTAIKHRGVTYFLVDMRSHGIEIRPLREITGRSVFNEVFLDDVFVPDECVVG 595 Query 566 AVNDGWRLARTTLANERVAMATGTALGNPMEELLKVL--GDMELDVAQQDRLGRLILLAQ 623 GWRLAR TL+ ERVAM G G +E L++++ G + + ++RLG I Sbjct 596 DPGQGWRLARATLSYERVAMGRGPGFGADVERLVRMVGAGGVASEPEMRERLGGHIADGL 655 Query 624 AGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQALAEYLMEVS--DGGGL--VENRAV 679 A +L++ R + G +S+V KLIGV +RQA+AE + + DG + AV Sbjct 656 AVSLVECRATLRQLDDGRGGPESAVAKLIGVSHRQAVAETALTLCGPDGAAVDGASAEAV 715 Query 680 YDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 + FL TRCL+IAGGT QILL++ AER+LGLPR Sbjct 716 HHFLLTRCLSIAGGTTQILLSLVAERVLGLPR 747 >gi|229488767|ref|ZP_04382633.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] gi|229324271|gb|EEN90026.1| putative acyl-CoA dehydrogenase [Rhodococcus erythropolis SK121] Length=726 Score = 562 bits (1449), Expect = 7e-158, Method: Compositional matrix adjust. Identities = 326/728 (45%), Positives = 453/728 (63%), Gaps = 33/728 (4%) Query 5 VTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFGVA 64 +++E R+ VRGWA A+ AV E + ++ GLA GL G+ Sbjct 5 LSEEDRDLRDSVRGWAARHATPTVVHEAV--------EAKVETRPQLWNGLAEQGLLGLH 56 Query 65 VPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSD---PKLRSALASGERFA 121 V E+ GGAG + +L +V+E R++VPGP T V + V+SD L G Sbjct 57 VAEEFGGAGYGLVELAIVVEELGRSMVPGPFLPTVVVSAVLSDAGETDRLPTLVDGSTLG 116 Query 122 GVAIDGG---VQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLR 178 VA+ G + D +T SGT ++LGG + LL D ++L+ D + V L Sbjct 117 AVALQPGSLKITRDGDNTTLSGTSSQILGGHVADLFLLATDSGFVLL--GRDRLEVTDLA 174 Query 179 ATDF-----SLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYA 233 + D + + +VLT + +L + +RV D+AAT+ AAEA+G+A W + T+ YA Sbjct 175 SYDVVRRNSEVTVDGLVLTDS--EILTIDTQRVLDIAATLFAAEASGLADWAVTTSADYA 232 Query 234 KVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGT---QLSIAAAVAA 290 KVR+QFG+PIG FQ VKH A+ML +EQA V A DAARA ++G + S+AAAVA Sbjct 233 KVRQQFGRPIGQFQGVKHKAARMLALSEQARVCAWDAARALTPANGVGAEEASLAAAVAG 292 Query 291 SIGIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAG 350 + ++A + +DCIQVLGGIG TWEHDAHLYLRRA + LG + W RRV LT AG Sbjct 293 ATALEAGFSVTRDCIQVLGGIGYTWEHDAHLYLRRAQSLRILLGSTASWRRRVAELTIAG 352 Query 351 VRRRLGVDLA-EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPA 409 RR L ++L E +R ++ A + L ++ LA+ G APH+ AP+G+ A Sbjct 353 TRRVLSIELPPEAEAVRADVRAELGPALELEGAAQKTYLAEKGYTAPHFTAPWGKSADAV 412 Query 410 EQLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPG 469 QL+I +EL AAK++ D++IG W PT++ HG EQ+ +FVP ++RG+ +WCQLFSEPG Sbjct 413 SQLVIAEELRAAKIKPHDMIIGNWVIPTLIAHGNEEQLAKFVPPSLRGDIVWCQLFSEPG 472 Query 470 AGSDLASLRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDM 529 AGSDLA+L TKA + DGGW L GQKVWTS A A WG+CLARTD DAPKHKG++YFL+D+ Sbjct 473 AGSDLAALSTKATKVDGGWKLQGQKVWTSMARDAHWGICLARTDADAPKHKGLSYFLIDI 532 Query 530 TTPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGT 589 G++IRPLREITG++LFNEVF D+VFVPDE +VG DGW+LARTTLANERV+++ + Sbjct 533 KNSGLDIRPLREITGEALFNEVFFDDVFVPDECLVGEPGDGWKLARTTLANERVSLSNDS 592 Query 590 ALGNPMEELLKVLGDME--LDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSS 647 +LG+ E LL ++ + +D Q LG+++ AQ+G LL R ++ G PGA+SS Sbjct 593 SLGSGGEALLSLVDGLPGGIDDEQLTVLGKVLCDAQSGGLLGLRTTLRSLTGAQPGAESS 652 Query 648 VRKLIGVRYRQALAEYLMEVSDGGGLVENR----AVYDFLNTRCLTIAGGTEQILLTVAA 703 V KLIGV + Q + + ME + L+ + A FLN++C++IAGGT + L + Sbjct 653 VAKLIGVEHIQQVWDVAMEWAGPSSLLGEQHRMSATQMFLNSQCMSIAGGTTNVQLNIIG 712 Query 704 ERLLGLPR 711 ER+LGLPR Sbjct 713 ERILGLPR 720 >gi|312141674|ref|YP_004009010.1| acyl-CoA dehydrogenase [Rhodococcus equi 103S] gi|311891013|emb|CBH50332.1| putative acyl-CoA dehydrogenase [Rhodococcus equi 103S] Length=707 Score = 561 bits (1447), Expect = 1e-157, Method: Compositional matrix adjust. Identities = 331/690 (48%), Positives = 441/690 (64%), Gaps = 28/690 (4%) Query 49 RPVFAG-LAGLGLFGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSD 107 RP + G LA LG+ G+ +PE+ GGAG + +L + +E RA+VPGP TAV + V+ + Sbjct 13 RPGYWGSLAELGMLGLHLPEEFGGAGYGLVELAIVTEELGRAMVPGPFLPTAVVSTVLRE 72 Query 108 PKLRSA----LASGERFAGVAID-GGVQV--DPKTSTASGTVGRVLGGAPGGVVLLPADG 160 R+A LA G F VA+ GG+++ D +T SGT +LGG G V LL A Sbjct 73 AG-RTAELEGLADGSLFGAVALQPGGLKLVRDGGKTTLSGTSSHILGGQVGDVFLLAASD 131 Query 161 NWLLV-DTACDEVVVEPLRATDFSLPLARMVLTSAPVT----------VLEVSGERVEDL 209 + + VVV R LP +V +A VT VLE+ +R+ D+ Sbjct 132 DDTDAAEGGLSFVVVARDRLDVTELPSHDVVRRNAEVTADGLELSDGDVLELDSQRILDI 191 Query 210 AATVLAAEAAGVARWTLDTAVAYAKVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAAD 269 AAT+ AAEA+G+A W TA YA+VR+QFG+ IG FQ VKH A+M EQA V A D Sbjct 192 AATLFAAEASGLADWATTTAADYARVRQQFGRVIGQFQGVKHKAARMFSLTEQARVTAWD 251 Query 270 AARA-AADSDGTQLSIAAAVAASIGIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHG 328 AARA D DGT+ S+AAAVA ++ +++A KDCIQVLGGIG TWEHDAHLYLRRA Sbjct 252 AARALGEDVDGTEASLAAAVAGAVALESAFQVTKDCIQVLGGIGFTWEHDAHLYLRRAQS 311 Query 329 IGGFLGGSGRWLRRVTALTQAGVRRRLGVDLA-EVAGLRPEIAAAVAEVAALPEEKRQVA 387 + LG + W RRV LT G RR L +DL E +R ++ A + AL +++ Sbjct 312 LRILLGSTASWKRRVANLTIDGARRVLSIDLPPEAEQIRADVRAELEPATALEGAEQKAY 371 Query 388 LADTGLLAPHWPAPYGRGASPAEQLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQI 447 LA+ G +PH PAP+G+GA QL+I +EL AA + D++IG W PT++ HG EQI Sbjct 372 LAEKGYTSPHLPAPWGKGADAVTQLVIAEELRAAALVPHDMIIGNWVIPTLIAHGNAEQI 431 Query 448 ERFVPATMRGEFLWCQLFSEPGAGSDLASLRTKAVRADGGWLLTGQKVWTSAAHKARWGV 507 ERFVP ++RG+ +WCQLFSEPGAGSDLA L TKA + DGGW L GQKVWTS A +A WG+ Sbjct 432 ERFVPQSLRGDIVWCQLFSEPGAGSDLAGLSTKATKVDGGWKLNGQKVWTSMAREADWGI 491 Query 508 CLARTDPDAPKHKGITYFLVDMTTPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAV 567 CLARTD DAPKHKG++YFL+D+ G++IRPLREITG++LFNEVFLD+VFVPDE +V Sbjct 492 CLARTDADAPKHKGLSYFLIDIKNSGLDIRPLREITGEALFNEVFLDDVFVPDECLVAEP 551 Query 568 NDGWRLARTTLANERVAMATGTALGNPMEELLKVLGDME--LDVAQQDRLGRLILLAQAG 625 DGW+LARTTLANERV+++ ++LG+ E LL + + LD Q LG+++ AQ+G Sbjct 552 GDGWKLARTTLANERVSLSHDSSLGSGGEALLDLAASIPGGLDDEQMTVLGKVLCDAQSG 611 Query 626 ALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQALAEYLMEVSDGGGLV----ENRAVYD 681 L+ R ++ G PGA+SS+ KL+GV + Q + E ME + L+ A Sbjct 612 GLMGLRTTLRSLTGAQPGAESSIAKLLGVEHIQQVWEVAMEWAGPSSLLGEQHRRSATQM 671 Query 682 FLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 FLN++C++IAGGT + L + ER+LGLPR Sbjct 672 FLNSQCMSIAGGTTNVQLNIIGERILGLPR 701 >gi|262200880|ref|YP_003272088.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia bronchialis DSM 43247] gi|262084227|gb|ACY20195.1| acyl-CoA dehydrogenase domain protein [Gordonia bronchialis DSM 43247] Length=726 Score = 561 bits (1447), Expect = 1e-157, Method: Compositional matrix adjust. Identities = 349/733 (48%), Positives = 439/733 (60%), Gaps = 40/733 (5%) Query 6 TDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFGVAV 65 ++EQ+A R+ + WART + D+ + D W + A LA G+FG AV Sbjct 6 SEEQNAVRQAIADWARTVGTA--------DLVRSDLDKPRDQWADLLAQLADFGVFGAAV 57 Query 66 PEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERFAGVAI 125 ED GG G D+ AM+++ +LVPGP+A T A + + R ++ I Sbjct 58 GEDRGGLGARFADVAAMLEQCGTSLVPGPLAPTVAAAVALG----RVDGTRAQQVLDALI 113 Query 126 DGGVQVDPKTSTASGT----------VGRVLGGAPGGVVLLP--ADGNWLLVDTACDEVV 173 GG + +G +G V G G VL P ++G W ++ C Sbjct 114 VGGYAAVTPAAATAGDAPVIVDGVLDLGLVAGFVDGAAVLTPLASNGTWYVIPPGCGVAE 173 Query 174 VEPLRATDFSLPLARMVLTSAPVTVLEVSGERV--EDLAATVLAAEAAGVARWTLDTAVA 231 V P D + ++R+ +T L + V L + LAA +GVARW L TAV Sbjct 174 VVPQSPVDGTSSVSRVRITDIADDDLIALDDSVLVTGLISAALAAYQSGVARWCLTTAVD 233 Query 232 YAKVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAA-ADSDGT-----QLSIA 285 YAKVR QFG PIGSFQA+KH+CA+M CR+E+ A D ARA A DG Q+ I+ Sbjct 234 YAKVRTQFGAPIGSFQAIKHICAEMACRSERITAVAWDLARAVDAVLDGEEDAHEQMRIS 293 Query 286 AAVAASIGIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTA 345 A A ++ ANA+DCIQVLGGIG T+EHDAHLYLR A LG + Sbjct 294 RAAADAVAAADPVANAEDCIQVLGGIGFTFEHDAHLYLRSALAAQITLGYGTAARIELAR 353 Query 346 LTQAGVRRRLGVDLAEVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRG 405 L AG RRR +DL++V R E+ A +A++AA ++ LA++G L PHWPAP+G G Sbjct 354 LGLAGGRRRFRLDLSDVEHRRAEVRADIADIAAADPADQRRLLAESGYLTPHWPAPHGLG 413 Query 406 ASPAEQLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLF 465 A A QLLID E A+V RPDLVI WA PTILEHGT EQ +RFV T+ G+ +WCQLF Sbjct 414 ADAALQLLIDAEFDRAQVHRPDLVIAGWAIPTILEHGTDEQRDRFVGPTLAGDIVWCQLF 473 Query 466 SEPGAGSDLASLRTKAVRAD-----GGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHK 520 SEP AGSDLA+LRT+A R D GW LTGQK+WTS AH A+W +CLARTDPDAPKHK Sbjct 474 SEPEAGSDLAALRTRAERVDDGENGAGWRLTGQKIWTSQAHNAQWAICLARTDPDAPKHK 533 Query 521 GITYFLVDMTTPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLAN 580 GITYFLVDM +PG++IRPLRE+TG + FNEVFLD+VFVPD+ VVG VN GWRLARTTLAN Sbjct 534 GITYFLVDMASPGLDIRPLRELTGRANFNEVFLDDVFVPDDCVVGEVNGGWRLARTTLAN 593 Query 581 ERVAMATGTALGNPMEELLKVLGDMELDVAQQD--RLGRLILLAQAGALLDRRIAELAVG 638 ERVAM G+ LG ME LL L D + D LG ++ A G +LD R + Sbjct 594 ERVAMG-GSGLGKEMEALLAQLADSPREPTPADLADLGAMVADAHVGRVLDARAVTERLA 652 Query 639 GQDPGAQSSVRKLIGVRYRQALAEYLMEVSDGGGLVENRAVYDFLNTRCLTIAGGTEQIL 698 G DPGA SS+RKLIGV +RQA+ E + + GL + A L RCL+IAGGT QIL Sbjct 653 GHDPGALSSIRKLIGVEHRQAVPELALRLLGVEGLAASEASDLLLQNRCLSIAGGTTQIL 712 Query 699 LTVAAERLLGLPR 711 T AAER+LGLPR Sbjct 713 RTAAAERILGLPR 725 >gi|326384609|ref|ZP_08206288.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326196743|gb|EGD53938.1| acyl-CoA dehydrogenase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length=723 Score = 560 bits (1443), Expect = 3e-157, Method: Compositional matrix adjust. Identities = 358/700 (52%), Positives = 425/700 (61%), Gaps = 45/700 (6%) Query 44 NADAWRPVFAGLAGLGLFGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATL 103 + ++WR ++ +A LGLF VPE GGA G+ ED+ M LVPGP+A T A Sbjct 36 SGESWRGLWTQIADLGLFAAGVPEGAGGADGTAEDVAVMFSACGAELVPGPLAPTMAAAY 95 Query 104 VVSDPKLRSALASGERFAGVAIDGGVQVDPKTSTA--------SGTVGRVLGGAPGGV-- 153 V++ ALA E AG+ V P T+ A SG V LG P V Sbjct 96 VLATEG--QALAD-EVMAGIR----PVVVPATAVAESAGFDVRSGAVD--LGLVPAFVAD 146 Query 154 ----VLLPADGN---WLLVDTACDEVVVE----PLRATDFSLPLARMVLT--SAPVTVLE 200 V L DG W +VD A V E PL T ++P AR+ ++ S TV Sbjct 147 ALIAVPLGFDGGPVGWRVVDAASVSVTAEAVDGPLDGT--AIP-ARVSISGLSESTTVPL 203 Query 201 VSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFGKPIGSFQAVKHLCAQMLCRA 260 GE L + A AGVA LD AV YAKVR QFG PIGSFQA+K +CA MLCR+ Sbjct 204 RDGELFVALLHAGVVAYQAGVAAHVLDVAVDYAKVRTQFGAPIGSFQAIKQICADMLCRS 263 Query 261 EQADVAAADAARAAAD-------SDGTQLSIAAAVAASIGIDAAKANAKDCIQVLGGIGC 313 EQ AA D ARA D + Q+ ++ A + D A NAKD IQVLGGIG Sbjct 264 EQLGAAAWDLARALDDLRAEESGAGRAQVELSRLAGAVLTADLAPENAKDAIQVLGGIGF 323 Query 314 TWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDLAEVAGLRPEIAAAV 373 T+EHDAHLYLR A L + L ++G RR +DL E RPEIAA Sbjct 324 TFEHDAHLYLRSALAARMQLAAGEPQRAALAELGRSGGRREFSLDLLEAESRRPEIAATA 383 Query 374 AEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAAAKVERPDLVIGWW 433 +AA E+++ LA TG LAPHWP PYG A PA QLLID EL V RPDLVI W Sbjct 384 DAIAAAAPEQQRAELARTGFLAPHWPEPYGLAADPAVQLLIDAELDRVGVVRPDLVIAGW 443 Query 434 AAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTKAVRADGGWLLTGQ 493 A PTILEHGT Q E+FV T+ G+ WCQLFSEP AGSDLASLRT+AVR DGGWLLTGQ Sbjct 444 ALPTILEHGTDLQREKFVAPTLAGDIRWCQLFSEPEAGSDLASLRTRAVRTDGGWLLTGQ 503 Query 494 KVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLREITGDSLFNEVFL 553 K+WTS AH ++W VCLART+PD PKHKGITYFLVDM GI+IRPLRE+TG ++FNEVFL Sbjct 504 KIWTSEAHMSQWAVCLARTNPDVPKHKGITYFLVDMAAAGIDIRPLRELTGRAMFNEVFL 563 Query 554 DNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLKVL--GDMELDVAQ 611 DNVFVPDEMVVG V++GWRLARTTLANERVAM G+ LG ++ LL L EL AQ Sbjct 564 DNVFVPDEMVVGDVDNGWRLARTTLANERVAMG-GSGLGKEVDALLHQLDAAAAELSQAQ 622 Query 612 QDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQALAEYLMEVSDGG 671 +LGR+I A G +LD R + G DPGA SSVRKLIGV +RQ++ E+ ++ Sbjct 623 TLQLGRIIADAHIGRVLDARSVAQRLSGTDPGATSSVRKLIGVVHRQSVPEFATDLLGCD 682 Query 672 GLVENRAVYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 GL + A L RCL+IAGGT QIL AAER+LGLPR Sbjct 683 GLGASSATGLLLLNRCLSIAGGTTQILKNAAAERILGLPR 722 >gi|119717019|ref|YP_923984.1| acyl-CoA dehydrogenase domain-containing protein [Nocardioides sp. JS614] gi|119537680|gb|ABL82297.1| acyl-CoA dehydrogenase domain protein [Nocardioides sp. JS614] Length=684 Score = 546 bits (1407), Expect = 5e-153, Method: Compositional matrix adjust. Identities = 358/716 (50%), Positives = 448/716 (63%), Gaps = 45/716 (6%) Query 5 VTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFGVA 64 ++DE +R WA A R++ EE A + V++ L+ +G+ + Sbjct 5 ISDEHVELAATLRKWA--------ADLRGRELARTVEEDPAARFDTVWSALSEMGVPTIG 56 Query 65 VPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERFAGVA 124 V E GG GGS D+ ++ A LVPGP+ AVA LV+ GER A Sbjct 57 VAESAGGGGGSTLDVAVALEACAHELVPGPLLGPAVAALVL-----------GERLPAGA 105 Query 125 IDGGVQVDPKTSTASGTVGRVLGGAPGGV-VLLPADGNWLLVDTACDEVVVEPLRATDFS 183 + G V +G + AP VL D W L+ D V + P R D S Sbjct 106 VVGLV------------LGEAVWDAPSATHVLAEVDAGWRLLPR--DAVELTPSRGVDLS 151 Query 184 LPLARM-VLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFGKP 242 + VL + + + + V A T+ AAEAAG+ARW L TAV YA VREQFG+ Sbjct 152 RRFGCLQVLDGSAGEPVRATTDGVRRAAVTLAAAEAAGIARWCLATAVEYAGVREQFGQR 211 Query 243 IGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKANAK 302 IGSFQA+KHLCA+ML AE AA D A AA+ ++ Q + AA VAA++ D A AK Sbjct 212 IGSFQAIKHLCAEMLETAESVTAAAWDVAVAASGAE-EQWTFAADVAATVAFDGAIEVAK 270 Query 303 DCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGVRRRLGVDL-AE 361 CIQVLGGIG T+EHDAHLYLRRA + +G S R+T AGVRRR+ +DL Sbjct 271 SCIQVLGGIGFTFEHDAHLYLRRAVALRALVGDSDAAADRLTTAAVAGVRRRVQLDLLGR 330 Query 362 VAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAAA 421 +R E+ A V +AALP E+R+ A +TG L PHWPAPYG GA P Q++IDQE A A Sbjct 331 DDAVRDEVRANVDRIAALPVEERRAAFVETGYLTPHWPAPYGLGADPVTQIVIDQEFARA 390 Query 422 KVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTKA 481 +ERPD+VI WA PTILEHGT EQ ERFV ++ G+ +WCQLFSEPGAGSDLASLRT+A Sbjct 391 GLERPDIVIAGWALPTILEHGTDEQRERFVRPSLLGDLVWCQLFSEPGAGSDLASLRTRA 450 Query 482 VRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDM-TTPGIEIRPLR 540 R +GGW LTGQKVWTS A +A WG+CLART+PDAPKH+GITYFLVDM + I++RPLR Sbjct 451 ERVEGGWRLTGQKVWTSVAERADWGICLARTNPDAPKHRGITYFLVDMRNSSDIDVRPLR 510 Query 541 EITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTALGNPMEELLK 600 EITG +LFNEVFLD+VFVPDEMVVG V+DGWRLARTTLANERVAMA+ + LG E ++ Sbjct 511 EITGQALFNEVFLDDVFVPDEMVVGEVDDGWRLARTTLANERVAMAS-SRLGTSTERAVE 569 Query 601 VLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQAL 660 L + AQ+ +G I LA ALL R ++ GQ PGA+SSV KL+GVR RQ Sbjct 570 -LAAAGVTPAQRVAVGHSIALATVCALLGVRSTLRSLAGQGPGAESSVAKLLGVRNRQDG 628 Query 661 AEYLMEVS-DGGGLVENRA----VYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 AE ++ + D L ++ A V++ LNTRCL+IAGGT QIL VA ER+LGLPR Sbjct 629 AELVVSLHGDRAVLGDDEAVRADVWELLNTRCLSIAGGTTQILRNVAGERILGLPR 684 >gi|296141471|ref|YP_003648714.1| acyl-CoA dehydrogenase domain-containing protein [Tsukamurella paurometabola DSM 20162] gi|296029605|gb|ADG80375.1| acyl-CoA dehydrogenase domain protein [Tsukamurella paurometabola DSM 20162] Length=694 Score = 545 bits (1404), Expect = 1e-152, Method: Compositional matrix adjust. Identities = 384/726 (53%), Positives = 457/726 (63%), Gaps = 56/726 (7%) Query 5 VTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFGVA 64 VTD Q A E +R WA A AA R + G E AWR GLA +G+FG+ Sbjct 5 VTDVQLALAESIRDWAERAHPIDAA----RSGDPGATE---KAWR----GLADIGVFGIT 53 Query 65 VPEDCGGAGGSIEDLCAMVDEAARALVPGPVA-TTAVATLVVS-----DPKLRSALASGE 118 + E+ GG GGS ED A V+ AA L PGPV T VA L+ D + A Sbjct 54 LSEELGGMGGSAEDAAAAVEAAALVLAPGPVGGTVTVAALLEHFLRDDDHLAATRAALAA 113 Query 119 RFAGVAI----DGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVV 174 A A+ DG + D ++++ +L APGG+ W L+ V V Sbjct 114 GDARAAVVLGGDGTLVADAESAS------HLLIEAPGGM--------WHLLPPGHPGVRV 159 Query 175 EPLRATDFSLPLARMVLTSA----PVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAV 230 EP D S PL R+ LT V ++ E AT +AAEA+ VA W L TA Sbjct 160 EPQTGLDGSRPLGRVHLTEVVFHDATAVPGLTFADAEAWVATFVAAEASAVAAWALRTAA 219 Query 231 AYAKVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAA 290 Y++VR QFGKPIGSFQA+K + A MLCR+EQA A DAAR+A G + +AAAV A Sbjct 220 EYSRVRVQFGKPIGSFQAIKQIAADMLCRSEQAAALAWDAARSAGG--GEEHRLAAAVGA 277 Query 291 SIGIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAG 350 + ++AA ANAKD IQVLGGIG TWEHDAHLYLRRA + GG+ RR L ++G Sbjct 278 AGALEAAVANAKDVIQVLGGIGFTWEHDAHLYLRRALALRQLAGGTHGLRRRAAELARSG 337 Query 351 VRRRLGVDLAEVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAE 410 VRRR V V G AA +AALPE R+ ALA++GLL PHW PYGRGA PAE Sbjct 338 VRRRYDV---SVEGDHDGAAAEAKAIAALPEADRRRALAESGLLVPHWDPPYGRGAGPAE 394 Query 411 QLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGA 470 Q+++D L AA VERP LVIG WAAPTILEHGT +Q +RFV T+ GE WCQLFSEP A Sbjct 395 QIVLDTALDAAGVERPPLVIGAWAAPTILEHGTADQAQRFVWPTLLGEISWCQLFSEPEA 454 Query 471 GSDLASLRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMT 530 GSDLA+LRT+AVRA+GGW LTGQKVWTS AH A W +CLART+P+APKHKGITYFLVDM Sbjct 455 GSDLAALRTRAVRAEGGWRLTGQKVWTSLAHSADWAICLARTNPEAPKHKGITYFLVDMR 514 Query 531 TPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTA 590 +PGI+IRPLREITGD FNEVFL+ VFVPDE VVG V+ GWRLARTTLANERVAM +G Sbjct 515 SPGIDIRPLREITGDERFNEVFLEEVFVPDECVVGDVDGGWRLARTTLANERVAM-SGNG 573 Query 591 LGNPMEELLKVLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSVRK 650 LG +E L +G E+D A LG LI A + ALLD R +VGGQDPG SSVRK Sbjct 574 LGARLEAL---IGRPEIDDAD---LGELITEAASCALLDLRAVIASVGGQDPGPSSSVRK 627 Query 651 LIGVRYRQALAEYLMEVSDGGGLV-----ENRAVYDFLNTRCLTIAGGTEQILLTVAAER 705 L+GV++RQ++AE + G V Y+FL TRCL+IAGGT QIL VAAE Sbjct 628 LVGVQHRQSVAEAALLCLGPDGAVAGPEDPEDERYEFLLTRCLSIAGGTSQILRNVAAEH 687 Query 706 LLGLPR 711 LLGLPR Sbjct 688 LLGLPR 693 >gi|159038395|ref|YP_001537648.1| acyl-CoA dehydrogenase domain-containing protein [Salinispora arenicola CNS-205] gi|157917230|gb|ABV98657.1| acyl-CoA dehydrogenase domain protein [Salinispora arenicola CNS-205] Length=750 Score = 543 bits (1400), Expect = 4e-152, Method: Compositional matrix adjust. Identities = 367/753 (49%), Positives = 459/753 (61%), Gaps = 57/753 (7%) Query 5 VTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGLFGVA 64 +T +Q A ++ +R WA +GA VR +E G + W GLA LG F +A Sbjct 5 MTTDQLALQDTIRRWA----AGADVLTTVRALENGSQSQADRHW----PGLADLGCFALA 56 Query 65 VPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVV----SDPKLRSAL---ASG 117 VPE GG GG + D+ ++++ LVPGPV T +A L + S P +++ L A+G Sbjct 57 VPEQLGGDGGRVSDVAVVLEQITIDLVPGPVMPTLLAALALAPHQSVPAVKTLLPDLAAG 116 Query 118 ERFAGVAIDGG----VQVDPKTSTASGTVGRVLG-GAPGGVVLLPADGN---WLLVDTAC 169 + GVA+ G V V +G V VLG GA ++L G W ++DT Sbjct 117 DVSVGVALAPGTLTAVSVPGGAYRVTGRVDAVLGAGASTHLMLTATTGTETIWFVLDTER 176 Query 170 DEVVVEPLRATDFSLPLARMVLTSAPV---TVLEVSGE-RVEDLAATVLAAEAAGVARWT 225 D V V DFS PLA + L A V +L SG+ R+ DLAA + A EAA VA W Sbjct 177 DGVRVRSRTPVDFSRPLADVRLAGALVESGQLLPSSGQARLRDLAALLGAVEAAAVAGWC 236 Query 226 LDTAVAYAKVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIA 285 L TA +AKVR QF +PIGSFQAV+HLCA MLCRAE+A A DAARA D +L +A Sbjct 237 LRTATEHAKVRRQFDRPIGSFQAVQHLCAGMLCRAERAIAVAWDAARAY-DQTREELPLA 295 Query 286 AAVAASIGIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTA 345 AA AA+I +DA NAKDCIQVLGGIG TWEHDAHLYLRRA + LGG+ W +R Sbjct 296 AATAAAIALDAGVDNAKDCIQVLGGIGFTWEHDAHLYLRRALAVRQVLGGAAGWRQRCAE 355 Query 346 LTQAGVRRRL---------------------GVDLAEVAGLRPEIAAAVAEVAALPEEKR 384 LT AG RR + G D AE A R + A + +A LP+ +R Sbjct 356 LTLAGARRHVWTVDGDLPASADAVATPPSSGGTD-AESAD-RVAVRAQIRVIAQLPDAER 413 Query 385 QVALADTGLLAPHWPAPYGRGASPAEQLLIDQELAAAKVERPDLVIGWWAAPTILEHGTP 444 + LA G LAPHWPAPYG ASPA QLLID+EL A + RPDL IG WA PTIL HGT Sbjct 414 RSRLAAVGYLAPHWPAPYGVDASPARQLLIDEELDRAGLTRPDLAIGGWAVPTILRHGTD 473 Query 445 EQIERFVPATMRGEFLWCQLFSEPGAGSDLASLRTKAVRADGGWLLTGQKVWTSAAHKAR 504 Q +RF ++RG+ WCQLFSEP AGSDLASLRT+A R GGW L+GQKVWTS A +A Sbjct 474 AQRDRFAGPSLRGDITWCQLFSEPEAGSDLASLRTRANRVTGGWRLSGQKVWTSLAAEAD 533 Query 505 WGVCLARTDPDAPKHKGITYFLVDMTTPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVV 564 W +CLARTD A KH+G+TYFLVDM +PGI+IRPLREITG S+FNEVFLD+VFVPD+ VV Sbjct 534 WAICLARTDRTAAKHRGLTYFLVDMRSPGIDIRPLREITGRSVFNEVFLDDVFVPDDCVV 593 Query 565 GAVNDGWRLARTTLANERVAMATGTALGNPMEELLKVLGDMEL--DVAQQDRLGRLILLA 622 G GWRLAR TL+ ERVAM G G +E L++++G L + ++RLG I Sbjct 594 GEPGQGWRLARATLSYERVAMGRGPGHGADVERLVRMVGAGGLADEPGMRERLGGHIADG 653 Query 623 QAGALLDRRIAELAVGGQDPGAQSSVRKLIGVRYRQALAEYLMEVS----DGGGLVENRA 678 A +L++ R +G G +S+V KLIGV +RQA+AE + + Sbjct 654 LAVSLVECRAMLRRLGDDRGGPESAVAKLIGVGHRQAVAETALVLCGPAGAAADGASAEP 713 Query 679 VYDFLNTRCLTIAGGTEQILLTVAAERLLGLPR 711 V+ FL TRCL+IAGGT QILL++ AER+LGLPR Sbjct 714 VHLFLLTRCLSIAGGTTQILLSLVAERVLGLPR 746 >gi|269128195|ref|YP_003301565.1| acyl-CoA dehydrogenase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268313153|gb|ACY99527.1| acyl-CoA dehydrogenase domain protein [Thermomonospora curvata DSM 43183] Length=734 Score = 532 bits (1370), Expect = 9e-149, Method: Compositional matrix adjust. Identities = 319/731 (44%), Positives = 429/731 (59%), Gaps = 34/731 (4%) Query 5 VTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVF-AGLAGLGLFGV 63 +T+E A VRG A + AV E+ RP F LA GL G+ Sbjct 5 LTEEHEALAASVRGLAERHITAQVVREAVESAEH--------PRRPRFWQALADQGLLGL 56 Query 64 AVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSA-------LAS 116 +PE+ GG G + + ++E RAL PGP T +A ++ + A LA Sbjct 57 HLPEEYGGQGFGLVEQAVALEELGRALAPGPYVPTVLAAAAIAAYASKEAKAALLPGLAD 116 Query 117 GERFAGVAIDGGVQVDPKT---STASGTVGRVLGGAPGGVVLLP-ADGNWLLVDTACDEV 172 G R A VA+ G P + SG VL +++LP + W +VD ++ Sbjct 117 GSRTAAVALRGDFTAAPGGDGGARISGATETVLCATQADLLVLPLGEDRWAVVDAEAAQI 176 Query 173 VVEPLRATDFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAY 232 L A D + P+AR+ ++ V + + DLA VL AEA GVA ++ A Y Sbjct 177 TA--LDALDLTRPVARVEVSDVTVPAERIFQGALGDLAVVVLGAEACGVAGRAVEEAAGY 234 Query 233 AKVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAA-ADSDGTQLSIAAAVAAS 291 AK+REQFG+PIG FQ +KH CA+ML AE+A A DAARA A + Q A AVA + Sbjct 235 AKIREQFGRPIGQFQGIKHKCARMLIAAERARAAVWDAARAIDAGEEPDQRGYAIAVAGA 294 Query 292 IGIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRRVTALTQAGV 351 + DAA A+D IQV GGIG T+EHDAHLY RRA + +G R+ R L AGV Sbjct 295 LVADAAVDCAEDNIQVHGGIGYTFEHDAHLYYRRAMTLRALIGRPSRYRERAARLALAGV 354 Query 352 RRRLGVDLA-EVAGLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAPYGRGASPAE 410 RR + ++L E LR + A VAE+A + ++ A+A+ G + PH P P+G+ A P E Sbjct 355 RRPMDIELPPEAEQLRERVRAEVAELAEMDPFTQRAAMAEGGWVTPHLPKPWGKDAGPVE 414 Query 411 QLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLWCQLFSEPGA 470 Q++I QEL A V L+I W P+++ +GTPEQ +RF+P T+RGE LWCQLFSEPGA Sbjct 415 QIVIQQELKRAGVRPVPLMIAGWVVPSLVAYGTPEQQQRFLPPTLRGEILWCQLFSEPGA 474 Query 471 GSDLASLRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKGITYFLVDMT 530 GSDLASL T+A + +GGW LTGQK+W S A +A+WG+CLARTDPDAPKH+GITYFLVDM Sbjct 475 GSDLASLTTRAEKVEGGWKLTGQKIWNSLAREAQWGICLARTDPDAPKHEGITYFLVDMK 534 Query 531 TPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANERVAMATGTA 590 +PG+E+RPLRE TG+++FNEVFLD VFVPDE+VVG VN GW++AR TLANERV + Sbjct 535 SPGLEVRPLRECTGEAVFNEVFLDGVFVPDELVVGPVNQGWKVARNTLANERVGLTGSFQ 594 Query 591 LGNPMEELLKVLGDMEL--DVAQQDRLGRLILLAQAGALLDRRIAELAVGGQDPGAQSSV 648 LG + +L+ ++GD+ L D +D LG L+ LL R + G DPG ++V Sbjct 595 LGASLRKLVSLIGDLGLADDPVVRDNLGDLVADEHTYLLLGLRATLKQISGTDPGVTANV 654 Query 649 RKLIGVRYRQALAEYLME------VSDGGGLVENRAVYDF--LNTRCLTIAGGTEQILLT 700 RKL+ + + Q + EY + +GG E R + F L +R +TI GGT ++ L Sbjct 655 RKLVAMEHGQRVTEYGFTLLGEDGMLNGGRKAELRHRWSFYMLASRAMTIGGGTTEVNLN 714 Query 701 VAAERLLGLPR 711 V ER+LGLPR Sbjct 715 VIGERILGLPR 725 >gi|289571815|ref|ZP_06452042.1| acyl-CoA dehydrogenase fadE34 [Mycobacterium tuberculosis T17] gi|289545569|gb|EFD49217.1| acyl-CoA dehydrogenase fadE34 [Mycobacterium tuberculosis T17] Length=348 Score = 521 bits (1343), Expect = 1e-145, Method: Compositional matrix adjust. Identities = 324/341 (96%), Positives = 326/341 (96%), Gaps = 2/341 (0%) Query 1 VVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 +VATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL Sbjct 1 MVATVTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVFAGLAGLGL 60 Query 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF 120 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF Sbjct 61 FGVAVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSDPKLRSALASGERF 120 Query 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT Sbjct 121 AGVAIDGGVQVDPKTSTASGTVGRVLGGAPGGVVLLPADGNWLLVDTACDEVVVEPLRAT 180 Query 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG Sbjct 181 DFSLPLARMVLTSAPVTVLEVSGERVEDLAATVLAAEAAGVARWTLDTAVAYAKVREQFG 240 Query 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN 300 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN Sbjct 241 KPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQLSIAAAVAASIGIDAAKAN 300 Query 301 AKDCIQVLGGIGCTW-EHDAHLYLRRAHGIGGF-LGGSGRW 339 AKDCIQVLGGIGCTW A + HGIGGF GRW Sbjct 301 AKDCIQVLGGIGCTWGARRAFVSAPEPHGIGGFPRWDPGRW 341 >gi|296268786|ref|YP_003651418.1| acyl-CoA dehydrogenase domain-containing protein [Thermobispora bispora DSM 43833] gi|296091573|gb|ADG87525.1| acyl-CoA dehydrogenase domain protein [Thermobispora bispora DSM 43833] Length=736 Score = 520 bits (1339), Expect = 4e-145, Method: Compositional matrix adjust. Identities = 328/747 (44%), Positives = 434/747 (59%), Gaps = 61/747 (8%) Query 5 VTDEQSAARELVRGWARTAASGAAATAAVRDMEYGFEEGNADAWRPVF-AGLAGLGLFGV 63 +++E A RE V GWA A V + EE RP F GLA GL G+ Sbjct 5 LSEEHRALRESVLGWAERTIPAEAVRGVVGALTESAEEK-----RPAFWTGLAEQGLLGL 59 Query 64 AVPEDCGGAGGSIEDLCAMVDEAARALVPGPVATTAVATLVVSD------PKLRSALASG 117 +PE+ GG+G + + +++ A + PGP T A+ ++ +L LA G Sbjct 60 HIPEEHGGSGYGLLETAVVIEALAERVAPGPYVPTVFASAAIAASEAKAKEQLLPGLADG 119 Query 118 ERFAGVAIDGGVQ--VDPKTSTASGTVGRVLGGAPGGVVLLP--ADG--NWLLVDTACDE 171 VA+ G ++ + SGT V+GG V++LP ADG W+ +D A + Sbjct 120 SLIGAVALTGSIRGVREGGELKISGTAEPVIGGGVADVLVLPVSADGGEEWVAIDAA--Q 177 Query 172 VVVEPLRATDFSLPLARMVLTSAPVTVLEVSGERV---------EDLAATVLAAEAAGVA 222 + P+R D + +A++ V L V ERV +LAA + A+A GVA Sbjct 178 ATITPVRPLDLTRGVAKV-----EVDGLAVPAERVLTGLDRTEVRNLAAILFGADAVGVA 232 Query 223 RWTLDTAVAYAKVREQFGKPIGSFQAVKHLCAQMLCRAEQADVAAADAARAAADSDGTQL 282 W + +A YAKVR QFG+PIG FQ +KH A ML EQA DAARA + G + Sbjct 233 AWCVRSAADYAKVRVQFGRPIGQFQGIKHKLAWMLVALEQARATVWDAARA---TGGAER 289 Query 283 SIAAAVAASIGIDAAKANAKDCIQVLGGIGCTWEHDAHLYLRRAHGIGGFLGGSGRWLRR 342 AAA+A I DAA AKD IQ GGIG T+EHDAHLY RRA I LG S W R Sbjct 290 EYAAAIAGVIAPDAAVRCAKDAIQTFGGIGYTFEHDAHLYYRRALTIRAALGRSAEWSER 349 Query 343 VTALTQAGVRRRLGVDLAEVA-GLRPEIAAAVAEVAALPEEKRQVALADTGLLAPHWPAP 401 V L GV R + ++L E A LR I A +AE+A L +++ ALA G + PH P P Sbjct 350 VAELALQGVTREMKIELPEEAEALRETIRAELAEIAKLEGVEQRRALAKAGFVMPHLPRP 409 Query 402 YGRGASPAEQLLIDQELAAAKVERPDLVIGWWAAPTILEHGTPEQIERFVPATMRGEFLW 461 +GR ASP EQ+LI QEL AAK++ P L+IG W P+I +GTPEQ ERF+P T+ GE +W Sbjct 410 WGRDASPLEQVLIHQELRAAKIKPPQLIIGAWVVPSIAVYGTPEQQERFLPPTLSGEMVW 469 Query 462 CQLFSEPGAGSDLASLRTKAVRADGGWLLTGQKVWTSAAHKARWGVCLARTDPDAPKHKG 521 CQLFSEPGAGSDLASL+ KA + +GGW L GQK+WTS A A WG+C+ARTDP PKH G Sbjct 470 CQLFSEPGAGSDLASLQLKAEKVEGGWKLNGQKIWTSFAQYAEWGICIARTDPSKPKHDG 529 Query 522 ITYFLVDMTTPGIEIRPLREITGDSLFNEVFLDNVFVPDEMVVGAVNDGWRLARTTLANE 581 ITYFLV+M +PGI +RPL E+TG++LFNEVF D+VFVPD+MVVG VNDGWR+AR TL+NE Sbjct 530 ITYFLVNMKSPGITVRPLVEMTGETLFNEVFFDDVFVPDDMVVGEVNDGWRVARNTLSNE 589 Query 582 RVAMATGTALGNP----MEELLKVLGDMELDVAQQDRLGRLILLAQAGALLDRRIAELAV 637 RV++++G+ + L++ LG V +QD + R++ A + L R+ + Sbjct 590 RVSLSSGSGGTGSSVPDLLGLVRRLGRELTPVERQD-VARVVCEAHSINALALRVTLKQL 648 Query 638 GGQDPGAQSSVRKLIGVRYRQALAEYLME-------------VSDGGGLVENRAVYDFLN 684 G +PGA +SVRKL+ + Q +AE + + D G NRAV L Sbjct 649 AGTEPGADASVRKLVSTTHAQHVAEVAVNLLGPDAVAAADARLGDAG--YWNRAV---LA 703 Query 685 TRCLTIAGGTEQILLTVAAERLLGLPR 711 TR +TI GGT ++ L + ERLLGLPR Sbjct 704 TRAMTIYGGTTEVQLNIIGERLLGLPR 730 Lambda K H 0.319 0.134 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1681351478088 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40