BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3574 Length=199 Score E Sequences producing significant alignments: (Bits) Value gi|148824779|ref|YP_001289534.1| TetR family transcriptional reg... 402 2e-110 gi|289555838|ref|ZP_06445048.1| transcriptional regulator, tetR-... 401 2e-110 gi|345462025|ref|NP_218091.2| transcriptional regulatory protein... 401 3e-110 gi|308372676|ref|ZP_07429472.2| LOW QUALITY PROTEIN: transcripti... 400 4e-110 gi|254366139|ref|ZP_04982183.1| transcriptional regulatory prote... 400 5e-110 gi|298527053|ref|ZP_07014462.1| transcriptional regulatory prote... 400 5e-110 gi|330689448|pdb|3MNL|A Chain A, The Crystal Structure Of Kstr (... 400 7e-110 gi|15843187|ref|NP_338224.1| TetR family transcriptional regulat... 399 2e-109 gi|31794751|ref|NP_857244.1| transcriptional regulatory protein ... 398 2e-109 gi|306786481|ref|ZP_07424803.1| transcriptional regulator, tetR-... 396 8e-109 gi|340628540|ref|YP_004746992.1| transcriptional regulatory prot... 396 1e-108 gi|296166623|ref|ZP_06849051.1| TetR family transcriptional regu... 390 4e-107 gi|254822724|ref|ZP_05227725.1| TetR family transcriptional regu... 388 2e-106 gi|118619324|ref|YP_907656.1| TetR family transcriptional regula... 386 8e-106 gi|342862406|ref|ZP_08719046.1| TetR family transcriptional regu... 386 1e-105 gi|336458485|gb|EGO37458.1| transcriptional regulator [Mycobacte... 383 1e-104 gi|41406589|ref|NP_959425.1| hypothetical protein MAP0491c [Myco... 383 1e-104 gi|118465428|ref|YP_879865.1| TetR family transcriptional regula... 380 5e-104 gi|240169806|ref|ZP_04748465.1| TetR family transcriptional regu... 379 1e-103 gi|108801676|ref|YP_641873.1| TetR family transcriptional regula... 370 6e-101 gi|118473108|ref|YP_890266.1| TetR family transcriptional regula... 367 6e-100 gi|120406260|ref|YP_956089.1| TetR family transcriptional regula... 362 2e-98 gi|145222051|ref|YP_001132729.1| TetR family transcriptional reg... 348 2e-94 gi|315446207|ref|YP_004079086.1| TetR family transcriptional reg... 347 4e-94 gi|333992506|ref|YP_004525120.1| TetR family transcriptional reg... 331 3e-89 gi|169627682|ref|YP_001701331.1| TetR family transcriptional reg... 299 1e-79 gi|312138116|ref|YP_004005452.1| tetr family transcriptional reg... 288 2e-76 gi|226363820|ref|YP_002781602.1| TetR family transcriptional reg... 283 1e-74 gi|111021454|ref|YP_704426.1| TetR family transcriptional regula... 283 1e-74 gi|54022411|ref|YP_116653.1| putative transcriptional regulator ... 282 2e-74 gi|226304195|ref|YP_002764153.1| TetR family transcriptional reg... 280 1e-73 gi|343925841|ref|ZP_08765356.1| putative TetR family transcripti... 258 4e-67 gi|262200879|ref|YP_003272087.1| TetR family transcriptional reg... 252 2e-65 gi|319948640|ref|ZP_08022764.1| TetR family transcriptional regu... 251 4e-65 gi|326384610|ref|ZP_08206289.1| regulatory protein TetR [Gordoni... 248 4e-64 gi|159038396|ref|YP_001537649.1| TetR family transcriptional reg... 237 7e-61 gi|145595150|ref|YP_001159447.1| regulatory protein TetR [Salini... 234 4e-60 gi|300784407|ref|YP_003764698.1| TetR family transcriptional reg... 231 3e-59 gi|296141462|ref|YP_003648705.1| TetR family transcriptional reg... 221 6e-56 gi|302525634|ref|ZP_07277976.1| transcriptional regulator [Strep... 221 7e-56 gi|333918572|ref|YP_004492153.1| transcriptional regulator [Amyc... 218 3e-55 gi|311744306|ref|ZP_07718110.1| TetR family transcriptional regu... 212 3e-53 gi|119717024|ref|YP_923989.1| TetR family transcriptional regula... 205 3e-51 gi|326331722|ref|ZP_08198010.1| transcriptional regulator, TetR ... 199 2e-49 gi|145225159|ref|YP_001135837.1| TetR family transcriptional reg... 174 7e-42 gi|108801802|ref|YP_641999.1| TetR family transcriptional regula... 169 3e-40 gi|315443032|ref|YP_004075911.1| TetR family transcriptional reg... 168 4e-40 gi|120401346|ref|YP_951175.1| TetR family transcriptional regula... 167 7e-40 gi|111021851|ref|YP_704823.1| TetR family transcriptional regula... 162 3e-38 gi|226364370|ref|YP_002782152.1| TetR family transcriptional reg... 160 9e-38 >gi|148824779|ref|YP_001289534.1| TetR family transcriptional regulator [Mycobacterium tuberculosis F11] gi|253800615|ref|YP_003033616.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis KZN 1435] gi|254234146|ref|ZP_04927470.1| transcriptional regulatory protein (probably tetR-family) [Mycobacterium tuberculosis C] gi|124603814|gb|EAY61777.1| transcriptional regulatory protein (probably tetR-family) [Mycobacterium tuberculosis C] gi|148723306|gb|ABR07931.1| transcriptional regulatory protein, tetR-family [Mycobacterium tuberculosis F11] gi|253322117|gb|ACT26720.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis KZN 1435] Length=295 Score = 402 bits (1032), Expect = 2e-110, Method: Compositional matrix adjust. Identities = 199/199 (100%), Positives = 199/199 (100%), Gaps = 0/199 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK Sbjct 97 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 156 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF Sbjct 157 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 216 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 217 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 276 Query 181 VSKRLDLAVRLLIGDQDSA 199 VSKRLDLAVRLLIGDQDSA Sbjct 277 VSKRLDLAVRLLIGDQDSA 295 >gi|289555838|ref|ZP_06445048.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis KZN 605] gi|289572227|ref|ZP_06452454.1| tetR-family transcriptional regulator [Mycobacterium tuberculosis K85] gi|289440470|gb|EFD22963.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis KZN 605] gi|289536658|gb|EFD41236.1| tetR-family transcriptional regulator [Mycobacterium tuberculosis K85] Length=278 Score = 401 bits (1031), Expect = 2e-110, Method: Compositional matrix adjust. Identities = 199/199 (100%), Positives = 199/199 (100%), Gaps = 0/199 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK Sbjct 80 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 139 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF Sbjct 140 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 199 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 200 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 259 Query 181 VSKRLDLAVRLLIGDQDSA 199 VSKRLDLAVRLLIGDQDSA Sbjct 260 VSKRLDLAVRLLIGDQDSA 278 >gi|345462025|ref|NP_218091.2| transcriptional regulatory protein TetR-family [Mycobacterium tuberculosis H37Rv] Length=220 Score = 401 bits (1030), Expect = 3e-110, Method: Compositional matrix adjust. Identities = 199/199 (100%), Positives = 199/199 (100%), Gaps = 0/199 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK Sbjct 22 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 81 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF Sbjct 82 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 141 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 142 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 201 Query 181 VSKRLDLAVRLLIGDQDSA 199 VSKRLDLAVRLLIGDQDSA Sbjct 202 VSKRLDLAVRLLIGDQDSA 220 >gi|308372676|ref|ZP_07429472.2| LOW QUALITY PROTEIN: transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu005] gi|308340283|gb|EFP29134.1| LOW QUALITY PROTEIN: transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu005] Length=219 Score = 400 bits (1029), Expect = 4e-110, Method: Compositional matrix adjust. Identities = 199/199 (100%), Positives = 199/199 (100%), Gaps = 0/199 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK Sbjct 21 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 80 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF Sbjct 81 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 140 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 141 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 200 Query 181 VSKRLDLAVRLLIGDQDSA 199 VSKRLDLAVRLLIGDQDSA Sbjct 201 VSKRLDLAVRLLIGDQDSA 219 >gi|254366139|ref|ZP_04982183.1| transcriptional regulatory protein (probably tetR-family) [Mycobacterium tuberculosis str. Haarlem] gi|289747411|ref|ZP_06506789.1| transcriptional regulatory protein [Mycobacterium tuberculosis 02_1987] gi|308372586|ref|ZP_07429168.2| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu004] gi|134151651|gb|EBA43696.1| transcriptional regulatory protein (probably tetR-family) [Mycobacterium tuberculosis str. Haarlem] gi|289687939|gb|EFD55427.1| transcriptional regulatory protein [Mycobacterium tuberculosis 02_1987] gi|308332791|gb|EFP21642.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu004] gi|328460346|gb|AEB05769.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis KZN 4207] Length=243 Score = 400 bits (1028), Expect = 5e-110, Method: Compositional matrix adjust. Identities = 199/199 (100%), Positives = 199/199 (100%), Gaps = 0/199 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK Sbjct 45 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 104 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF Sbjct 105 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 164 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 165 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 224 Query 181 VSKRLDLAVRLLIGDQDSA 199 VSKRLDLAVRLLIGDQDSA Sbjct 225 VSKRLDLAVRLLIGDQDSA 243 >gi|298527053|ref|ZP_07014462.1| transcriptional regulatory protein [Mycobacterium tuberculosis 94_M4241A] gi|308406194|ref|ZP_07495483.2| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu012] gi|298496847|gb|EFI32141.1| transcriptional regulatory protein [Mycobacterium tuberculosis 94_M4241A] gi|308364191|gb|EFP53042.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu012] gi|323717768|gb|EGB26966.1| transcriptional regulator [Mycobacterium tuberculosis CDC1551A] Length=201 Score = 400 bits (1028), Expect = 5e-110, Method: Compositional matrix adjust. Identities = 199/199 (100%), Positives = 199/199 (100%), Gaps = 0/199 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK Sbjct 3 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 62 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF Sbjct 63 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 122 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 123 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 182 Query 181 VSKRLDLAVRLLIGDQDSA 199 VSKRLDLAVRLLIGDQDSA Sbjct 183 VSKRLDLAVRLLIGDQDSA 201 >gi|330689448|pdb|3MNL|A Chain A, The Crystal Structure Of Kstr (Rv3574) From Mycobacterium Tuberculosis H37rv gi|330689449|pdb|3MNL|B Chain B, The Crystal Structure Of Kstr (Rv3574) From Mycobacterium Tuberculosis H37rv Length=203 Score = 400 bits (1027), Expect = 7e-110, Method: Compositional matrix adjust. Identities = 199/199 (100%), Positives = 199/199 (100%), Gaps = 0/199 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK Sbjct 5 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 64 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF Sbjct 65 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 124 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 125 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 184 Query 181 VSKRLDLAVRLLIGDQDSA 199 VSKRLDLAVRLLIGDQDSA Sbjct 185 VSKRLDLAVRLLIGDQDSA 203 >gi|15843187|ref|NP_338224.1| TetR family transcriptional regulator [Mycobacterium tuberculosis CDC1551] gi|13883540|gb|AAK48038.1| transcriptional regulator, TetR family [Mycobacterium tuberculosis CDC1551] Length=243 Score = 399 bits (1024), Expect = 2e-109, Method: Compositional matrix adjust. Identities = 198/199 (99%), Positives = 198/199 (99%), Gaps = 0/199 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK Sbjct 45 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 104 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREFSRIDAKTDRSA AGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF Sbjct 105 VHLLVSALGREFSRIDAKTDRSAXAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 164 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 165 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 224 Query 181 VSKRLDLAVRLLIGDQDSA 199 VSKRLDLAVRLLIGDQDSA Sbjct 225 VSKRLDLAVRLLIGDQDSA 243 >gi|31794751|ref|NP_857244.1| transcriptional regulatory protein TetR-family [Mycobacterium bovis AF2122/97] gi|121639494|ref|YP_979718.1| TetR family transcriptional regulator [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663438|ref|YP_001284961.1| TetR family transcriptional regulator [Mycobacterium tuberculosis H37Ra] 50 more sequence titles Length=199 Score = 398 bits (1023), Expect = 2e-109, Method: Compositional matrix adjust. Identities = 198/199 (99%), Positives = 199/199 (100%), Gaps = 0/199 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 +AVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK Sbjct 1 MAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF Sbjct 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 Query 181 VSKRLDLAVRLLIGDQDSA 199 VSKRLDLAVRLLIGDQDSA Sbjct 181 VSKRLDLAVRLLIGDQDSA 199 >gi|306786481|ref|ZP_07424803.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu003] gi|308328969|gb|EFP17820.1| transcriptional regulator, tetR-family [Mycobacterium tuberculosis SUMu003] Length=199 Score = 396 bits (1018), Expect = 8e-109, Method: Compositional matrix adjust. Identities = 197/199 (99%), Positives = 199/199 (100%), Gaps = 0/199 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 +AVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK Sbjct 1 MAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF Sbjct 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASAT+ Sbjct 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATN 180 Query 181 VSKRLDLAVRLLIGDQDSA 199 VSKRLDLAVRLLIGDQDSA Sbjct 181 VSKRLDLAVRLLIGDQDSA 199 >gi|340628540|ref|YP_004746992.1| transcriptional regulatory protein [Mycobacterium canettii CIPT 140010059] gi|340006730|emb|CCC45918.1| transcriptional regulatory protein (probably TETR-family) [Mycobacterium canettii CIPT 140010059] Length=199 Score = 396 bits (1017), Expect = 1e-108, Method: Compositional matrix adjust. Identities = 197/199 (99%), Positives = 199/199 (100%), Gaps = 0/199 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 +AVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK Sbjct 1 MAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF Sbjct 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAASEVDQVEKLIDSMFARAMA+GEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 121 ADASAASEVDQVEKLIDSMFARAMADGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 Query 181 VSKRLDLAVRLLIGDQDSA 199 VSKRLDLAVRLLIGDQDSA Sbjct 181 VSKRLDLAVRLLIGDQDSA 199 >gi|296166623|ref|ZP_06849051.1| TetR family transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898026|gb|EFG77604.1| TetR family transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] Length=219 Score = 390 bits (1003), Expect = 4e-107, Method: Compositional matrix adjust. Identities = 193/197 (98%), Positives = 196/197 (99%), Gaps = 0/197 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK Sbjct 21 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 80 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREFSRIDAKTDRS+VAG TPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF Sbjct 81 VHLLVSALGREFSRIDAKTDRSSVAGGTPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 140 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAASEVDQVEKLIDSMFARAMA+GEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 141 ADASAASEVDQVEKLIDSMFARAMADGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 200 Query 181 VSKRLDLAVRLLIGDQD 197 VSKRLDLAVRLLIGDQ+ Sbjct 201 VSKRLDLAVRLLIGDQN 217 >gi|254822724|ref|ZP_05227725.1| TetR family transcriptional regulator [Mycobacterium intracellulare ATCC 13950] Length=199 Score = 388 bits (997), Expect = 2e-106, Method: Compositional matrix adjust. Identities = 192/198 (97%), Positives = 195/198 (99%), Gaps = 0/198 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 +AVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK Sbjct 1 MAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREF RIDAKTDRSA+ G TPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF Sbjct 61 VHLLVSALGREFGRIDAKTDRSAMTGGTPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAASEVDQVEKLIDSMFARAMA+GEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 121 ADASAASEVDQVEKLIDSMFARAMADGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 Query 181 VSKRLDLAVRLLIGDQDS 198 VSKRLDLAVRLLIGDQDS Sbjct 181 VSKRLDLAVRLLIGDQDS 198 >gi|118619324|ref|YP_907656.1| TetR family transcriptional regulator [Mycobacterium ulcerans Agy99] gi|183985037|ref|YP_001853328.1| TetR family transcriptional regulator [Mycobacterium marinum M] gi|118571434|gb|ABL06185.1| transcriptional regulatory protein (TetR- family) [Mycobacterium ulcerans Agy99] gi|183178363|gb|ACC43473.1| transcriptional regulatory protein (TetR- family) [Mycobacterium marinum M] Length=200 Score = 386 bits (992), Expect = 8e-106, Method: Compositional matrix adjust. Identities = 190/198 (96%), Positives = 196/198 (99%), Gaps = 0/198 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 +AVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK Sbjct 1 MAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREFSRIDAKTDRSA+ G TPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF Sbjct 61 VHLLVSALGREFSRIDAKTDRSAMTGGTPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAA+EVDQVEKLIDSMFARAMA+GEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 121 ADASAATEVDQVEKLIDSMFARAMADGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 Query 181 VSKRLDLAVRLLIGDQDS 198 VSKRLDLAVRLLIGDQ++ Sbjct 181 VSKRLDLAVRLLIGDQEA 198 >gi|342862406|ref|ZP_08719046.1| TetR family transcriptional regulator [Mycobacterium colombiense CECT 3035] gi|342130077|gb|EGT83411.1| TetR family transcriptional regulator [Mycobacterium colombiense CECT 3035] Length=199 Score = 386 bits (991), Expect = 1e-105, Method: Compositional matrix adjust. Identities = 191/199 (96%), Positives = 195/199 (98%), Gaps = 0/199 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 +AVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK Sbjct 1 MAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREFSRIDAKTDRSA+ G TPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF Sbjct 61 VHLLVSALGREFSRIDAKTDRSAMTGGTPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAASEVDQVEKLIDSMFARAMA+GEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 121 ADASAASEVDQVEKLIDSMFARAMADGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 Query 181 VSKRLDLAVRLLIGDQDSA 199 VSKRLDLAVRLLIGD + A Sbjct 181 VSKRLDLAVRLLIGDTEQA 199 >gi|336458485|gb|EGO37458.1| transcriptional regulator [Mycobacterium avium subsp. paratuberculosis S397] Length=225 Score = 383 bits (983), Expect = 1e-104, Method: Compositional matrix adjust. Identities = 188/196 (96%), Positives = 193/196 (99%), Gaps = 0/196 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK Sbjct 29 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 88 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREFSRIDAKTDR+A+ G TPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF Sbjct 89 VHLLVSALGREFSRIDAKTDRAAMTGGTPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 148 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAASEVDQVEKLIDSMFARAMA+GEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 149 ADASAASEVDQVEKLIDSMFARAMADGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 208 Query 181 VSKRLDLAVRLLIGDQ 196 VSKRLDLAVRLL+G+ Sbjct 209 VSKRLDLAVRLLLGEH 224 >gi|41406589|ref|NP_959425.1| hypothetical protein MAP0491c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394938|gb|AAS02808.1| hypothetical protein MAP_0491c [Mycobacterium avium subsp. paratuberculosis K-10] Length=248 Score = 383 bits (983), Expect = 1e-104, Method: Compositional matrix adjust. Identities = 188/196 (96%), Positives = 193/196 (99%), Gaps = 0/196 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK Sbjct 52 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 111 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREFSRIDAKTDR+A+ G TPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF Sbjct 112 VHLLVSALGREFSRIDAKTDRAAMTGGTPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 171 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAASEVDQVEKLIDSMFARAMA+GEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 172 ADASAASEVDQVEKLIDSMFARAMADGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 231 Query 181 VSKRLDLAVRLLIGDQ 196 VSKRLDLAVRLL+G+ Sbjct 232 VSKRLDLAVRLLLGEH 247 >gi|118465428|ref|YP_879865.1| TetR family transcriptional regulator [Mycobacterium avium 104] gi|254773543|ref|ZP_05215059.1| hypothetical protein MaviaA2_02540 [Mycobacterium avium subsp. avium ATCC 25291] gi|118166715|gb|ABK67612.1| transcriptional regulator, TetR family protein [Mycobacterium avium 104] Length=197 Score = 380 bits (977), Expect = 5e-104, Method: Compositional matrix adjust. Identities = 187/196 (96%), Positives = 193/196 (99%), Gaps = 0/196 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 +AVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK Sbjct 1 MAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREFSRIDAKTDR+A+ G TPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF Sbjct 61 VHLLVSALGREFSRIDAKTDRAALTGGTPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAASEVDQVEKLIDSMFARAMA+GEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 121 ADASAASEVDQVEKLIDSMFARAMADGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 Query 181 VSKRLDLAVRLLIGDQ 196 VSKRLDLAVRLL+G+ Sbjct 181 VSKRLDLAVRLLLGEH 196 >gi|240169806|ref|ZP_04748465.1| TetR family transcriptional regulator [Mycobacterium kansasii ATCC 12478] Length=199 Score = 379 bits (974), Expect = 1e-103, Method: Compositional matrix adjust. Identities = 188/199 (95%), Positives = 195/199 (98%), Gaps = 0/199 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 +AVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK Sbjct 1 MAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREFSRIDAKTDRSA+AG T +QRL+FMVGKLNRAMQRNPLLTEAMTRAYVF Sbjct 61 VHLLVSALGREFSRIDAKTDRSALAGGTSYQRLSFMVGKLNRAMQRNPLLTEAMTRAYVF 120 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAASEVD VEKLIDSMFARAMA+GEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 121 ADASAASEVDHVEKLIDSMFARAMADGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 Query 181 VSKRLDLAVRLLIGDQDSA 199 VSKRLDLAVRLL+G Q+SA Sbjct 181 VSKRLDLAVRLLLGGQESA 199 >gi|108801676|ref|YP_641873.1| TetR family transcriptional regulator [Mycobacterium sp. MCS] gi|119870827|ref|YP_940779.1| TetR family transcriptional regulator [Mycobacterium sp. KMS] gi|126437662|ref|YP_001073353.1| TetR family transcriptional regulator [Mycobacterium sp. JLS] gi|108772095|gb|ABG10817.1| transcriptional regulator, TetR family [Mycobacterium sp. MCS] gi|119696916|gb|ABL93989.1| transcriptional regulator, TetR family [Mycobacterium sp. KMS] gi|126237462|gb|ABO00863.1| transcriptional regulator, TetR family [Mycobacterium sp. JLS] Length=218 Score = 370 bits (950), Expect = 6e-101, Method: Compositional matrix adjust. Identities = 182/197 (93%), Positives = 191/197 (97%), Gaps = 0/197 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 VAVLAESELGSEAQRERRKRILDAT+AIASKGGYEAVQMRAVA+RADVAVGTLYRYFPSK Sbjct 18 VAVLAESELGSEAQRERRKRILDATLAIASKGGYEAVQMRAVAERADVAVGTLYRYFPSK 77 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREF RIDAKTDR+A+AG TP+QRLNFMVGKLNRAMQRNPLLTEAMTRA+VF Sbjct 78 VHLLVSALGREFERIDAKTDRAALAGGTPYQRLNFMVGKLNRAMQRNPLLTEAMTRAFVF 137 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAA EVD V KL+DSMFARAM++GEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 138 ADASAAGEVDHVGKLMDSMFARAMSDGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 197 Query 181 VSKRLDLAVRLLIGDQD 197 VSKRLDLAVRLLIGD D Sbjct 198 VSKRLDLAVRLLIGDGD 214 >gi|118473108|ref|YP_890266.1| TetR family transcriptional regulator [Mycobacterium smegmatis str. MC2 155] gi|322518316|sp|A0R528.1|KSTR_MYCS2 RecName: Full=HTH-type transcriptional repressor KstR gi|118174395|gb|ABK75291.1| transcriptional regulator, TetR family protein [Mycobacterium smegmatis str. MC2 155] Length=204 Score = 367 bits (941), Expect = 6e-100, Method: Compositional matrix adjust. Identities = 179/197 (91%), Positives = 191/197 (97%), Gaps = 0/197 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 VAVL+ESELGSEAQRERRKRILDAT+AIASKGGYEAVQMRAVA+RADVAVGTLYRYFPSK Sbjct 4 VAVLSESELGSEAQRERRKRILDATLAIASKGGYEAVQMRAVAERADVAVGTLYRYFPSK 63 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSALGREF RIDAKTDR+A+AG TP+QRLNFMVGKLNRAMQRNPLLTEAMTRA+VF Sbjct 64 VHLLVSALGREFERIDAKTDRAALAGGTPYQRLNFMVGKLNRAMQRNPLLTEAMTRAFVF 123 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAA EVD V KL+DSMFARAM++GEPTEDQYHIARVISDVWLSNLLAWLTRRASATD Sbjct 124 ADASAAGEVDHVGKLMDSMFARAMSDGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 183 Query 181 VSKRLDLAVRLLIGDQD 197 VSKRLDLAVRLLIG ++ Sbjct 184 VSKRLDLAVRLLIGTEE 200 >gi|120406260|ref|YP_956089.1| TetR family transcriptional regulator [Mycobacterium vanbaalenii PYR-1] gi|119959078|gb|ABM16083.1| transcriptional regulator, TetR family [Mycobacterium vanbaalenii PYR-1] Length=235 Score = 362 bits (928), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 181/198 (92%), Positives = 189/198 (96%), Gaps = 1/198 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 VAVLAESELGSEAQRERRKRILDAT+AIASKGGYEAVQMRAVA+RADVAVGTLYRYFPSK Sbjct 34 VAVLAESELGSEAQRERRKRILDATLAIASKGGYEAVQMRAVAERADVAVGTLYRYFPSK 93 Query 61 VHLLVSALGREFSRIDAKTDRSAV-AGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYV 119 VHLLVSALGREF RIDAKTDRSA AGAT +QRLN MVGKLNRAMQRNPLLTEAMTRA+V Sbjct 94 VHLLVSALGREFERIDAKTDRSAFPAGATAYQRLNIMVGKLNRAMQRNPLLTEAMTRAFV 153 Query 120 FADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASAT 179 FADASAA EVD V KL+DSMFARAM++GEPTEDQYHIARVISDVWLSNLLAWLTRRASAT Sbjct 154 FADASAAGEVDHVGKLMDSMFARAMSDGEPTEDQYHIARVISDVWLSNLLAWLTRRASAT 213 Query 180 DVSKRLDLAVRLLIGDQD 197 DV+KRLDLAVRLLIGD D Sbjct 214 DVAKRLDLAVRLLIGDGD 231 >gi|145222051|ref|YP_001132729.1| TetR family transcriptional regulator [Mycobacterium gilvum PYR-GCK] gi|145214537|gb|ABP43941.1| transcriptional regulator, TetR family [Mycobacterium gilvum PYR-GCK] Length=223 Score = 348 bits (894), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 177/198 (90%), Positives = 187/198 (95%), Gaps = 1/198 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 VAVLAESELGSEAQRERRKRILDAT+AIASKGGYEAVQMRAVA+RADVAVGTLYRYFPSK Sbjct 22 VAVLAESELGSEAQRERRKRILDATLAIASKGGYEAVQMRAVAERADVAVGTLYRYFPSK 81 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATP-FQRLNFMVGKLNRAMQRNPLLTEAMTRAYV 119 VHLLVSALGREF RIDAKTDR+A+A +QRLN MVGKLNRAMQRNPLLTEAMTRA+V Sbjct 82 VHLLVSALGREFERIDAKTDRAALAAGATAYQRLNIMVGKLNRAMQRNPLLTEAMTRAFV 141 Query 120 FADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASAT 179 FADASAA EVD V KL+DSMFARAM++GEPTEDQYHIARVISDVWLSNLLAWLTRRASAT Sbjct 142 FADASAAGEVDHVGKLMDSMFARAMSDGEPTEDQYHIARVISDVWLSNLLAWLTRRASAT 201 Query 180 DVSKRLDLAVRLLIGDQD 197 DV+KRLDLAVRLLIGD D Sbjct 202 DVAKRLDLAVRLLIGDGD 219 >gi|315446207|ref|YP_004079086.1| TetR family transcriptional regulator [Mycobacterium sp. Spyr1] gi|315264510|gb|ADU01252.1| transcriptional regulator, TetR family [Mycobacterium sp. Spyr1] Length=204 Score = 347 bits (891), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 177/198 (90%), Positives = 187/198 (95%), Gaps = 1/198 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 VAVLAESELGSEAQRERRKRILDAT+AIASKGGYEAVQMRAVA+RADVAVGTLYRYFPSK Sbjct 3 VAVLAESELGSEAQRERRKRILDATLAIASKGGYEAVQMRAVAERADVAVGTLYRYFPSK 62 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATP-FQRLNFMVGKLNRAMQRNPLLTEAMTRAYV 119 VHLLVSALGREF RIDAKTDR+A+A +QRLN MVGKLNRAMQRNPLLTEAMTRA+V Sbjct 63 VHLLVSALGREFERIDAKTDRAALAAGATAYQRLNIMVGKLNRAMQRNPLLTEAMTRAFV 122 Query 120 FADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASAT 179 FADASAA EVD V KL+DSMFARAM++GEPTEDQYHIARVISDVWLSNLLAWLTRRASAT Sbjct 123 FADASAAGEVDHVGKLMDSMFARAMSDGEPTEDQYHIARVISDVWLSNLLAWLTRRASAT 182 Query 180 DVSKRLDLAVRLLIGDQD 197 DV+KRLDLAVRLLIGD D Sbjct 183 DVAKRLDLAVRLLIGDGD 200 >gi|333992506|ref|YP_004525120.1| TetR family transcriptional regulator [Mycobacterium sp. JDM601] gi|333488474|gb|AEF37866.1| TetR family transcriptional regulator [Mycobacterium sp. JDM601] Length=201 Score = 331 bits (849), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 163/198 (83%), Positives = 179/198 (91%), Gaps = 0/198 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 +AVL ES+LGSEAQRERRKRILDAT+AIASKGGY+AVQMRAVADRADVAVGTLYRYFPSK Sbjct 1 MAVLTESDLGSEAQRERRKRILDATLAIASKGGYDAVQMRAVADRADVAVGTLYRYFPSK 60 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSA+GRE +R++ K D + A T QRLN +V KLNRAMQRNPLLTEAMTRAYVF Sbjct 61 VHLLVSAMGREIARVETKPDPATYAETTRHQRLNLVVNKLNRAMQRNPLLTEAMTRAYVF 120 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAA EVD V+KLIDSMFA AM++GEPTE+QYHI+RVISDVWLSNLLAWLTRRASATD Sbjct 121 ADASAAGEVDHVQKLIDSMFAGAMSDGEPTEEQYHISRVISDVWLSNLLAWLTRRASATD 180 Query 181 VSKRLDLAVRLLIGDQDS 198 + RLDLAVRLLIGD DS Sbjct 181 FTTRLDLAVRLLIGDDDS 198 >gi|169627682|ref|YP_001701331.1| TetR family transcriptional regulator [Mycobacterium abscessus ATCC 19977] gi|169239649|emb|CAM60677.1| Putative transcriptional regulator, TetR family [Mycobacterium abscessus] Length=225 Score = 299 bits (766), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 147/195 (76%), Positives = 171/195 (88%), Gaps = 1/195 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 V+ L++ +LGS AQRERRKRILDAT+AIASKGGYEAVQMR VA+RADVAVGTLYRYFPSK Sbjct 29 VSALSDDDLGSSAQRERRKRILDATLAIASKGGYEAVQMRTVAERADVAVGTLYRYFPSK 88 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSAL REF +IDAK+DR+AV+G TP++RL+ + +LNR MQRNPLLTEAMTRA VF Sbjct 89 VHLLVSALEREFEQIDAKSDRNAVSGGTPYERLHAAITRLNRNMQRNPLLTEAMTRALVF 148 Query 121 ADASAASEVDQVEKLIDSMFARAMAN-GEPTEDQYHIARVISDVWLSNLLAWLTRRASAT 179 ADASAA EVD V +L+D +FARAMA +PT+ Q+HIARVISDVW SN++AWLTRRASAT Sbjct 149 ADASAAGEVDHVGRLMDGIFARAMAGEDDPTDAQFHIARVISDVWTSNMIAWLTRRASAT 208 Query 180 DVSKRLDLAVRLLIG 194 DVS RLD VRLL+G Sbjct 209 DVSHRLDRTVRLLLG 223 >gi|312138116|ref|YP_004005452.1| tetr family transcriptional regulator [Rhodococcus equi 103S] gi|325674980|ref|ZP_08154667.1| TetR family transcriptional regulator [Rhodococcus equi ATCC 33707] gi|311887455|emb|CBH46767.1| TetR family transcriptional regulator [Rhodococcus equi 103S] gi|325554566|gb|EGD24241.1| TetR family transcriptional regulator [Rhodococcus equi ATCC 33707] Length=212 Score = 288 bits (738), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 138/195 (71%), Positives = 170/195 (88%), Gaps = 2/195 (1%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 V+ L+E +L S AQRERRKRILDAT+ +ASKGGYEAVQMRAVA+RADVAVGTLYRYFPSK Sbjct 14 VSTLSEDDLSSNAQRERRKRILDATLTLASKGGYEAVQMRAVAERADVAVGTLYRYFPSK 73 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSAL REF RI++K G +P +R+ ++G++ +AMQR+PLLTEAMTRA++F Sbjct 74 VHLLVSALAREFERIESKG--KIPPGHSPLERMQLILGQITKAMQRDPLLTEAMTRAFMF 131 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAA+EVDQV KL+D++FARA+ +GEPTE+Q +ARVISDVWLSNL+AWLTRR+SATD Sbjct 132 ADASAAAEVDQVGKLMDTLFARAITDGEPTEEQLAVARVISDVWLSNLVAWLTRRSSATD 191 Query 181 VSKRLDLAVRLLIGD 195 V+KRL+L V LL+GD Sbjct 192 VAKRLELTVELLLGD 206 >gi|226363820|ref|YP_002781602.1| TetR family transcriptional regulator [Rhodococcus opacus B4] gi|226242309|dbj|BAH52657.1| putative TetR family transcriptional regulator [Rhodococcus opacus B4] Length=212 Score = 283 bits (723), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 138/194 (72%), Positives = 164/194 (85%), Gaps = 2/194 (1%) Query 2 AVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKV 61 A L E +L S AQ+ERRKRILDAT+A+ASKGGYEAVQMRAVA+RADVAVGTLYRYFPSKV Sbjct 15 ATLGEDDLSSNAQKERRKRILDATLALASKGGYEAVQMRAVAERADVAVGTLYRYFPSKV 74 Query 62 HLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFA 121 HLLVSAL REF RID++ G P +R+ ++ ++ RAMQR+PLLTEAMTRA++FA Sbjct 75 HLLVSALAREFERIDSRGKNPP--GRNPLERMQLILSQITRAMQRDPLLTEAMTRAFMFA 132 Query 122 DASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDV 181 DASAA+EVDQV KL+D +FARAM + EPTEDQ +ARVISDVWLSNL+AWLTRR+SATDV Sbjct 133 DASAAAEVDQVGKLMDRLFARAMTDTEPTEDQLAVARVISDVWLSNLVAWLTRRSSATDV 192 Query 182 SKRLDLAVRLLIGD 195 + RL+L V LL+GD Sbjct 193 ANRLELTVELLLGD 206 >gi|111021454|ref|YP_704426.1| TetR family transcriptional regulator [Rhodococcus jostii RHA1] gi|123340118|sp|Q0S868.1|KSTR_RHOSR RecName: Full=HTH-type transcriptional repressor KstR gi|110820984|gb|ABG96268.1| transcriptional regulator, TetR family protein [Rhodococcus jostii RHA1] Length=212 Score = 283 bits (723), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 138/194 (72%), Positives = 164/194 (85%), Gaps = 2/194 (1%) Query 2 AVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKV 61 A L E +L S AQ+ERRKRILDAT+A+ASKGGYEAVQMRAVA+RADVAVGTLYRYFPSKV Sbjct 15 ATLGEDDLSSNAQKERRKRILDATLALASKGGYEAVQMRAVAERADVAVGTLYRYFPSKV 74 Query 62 HLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFA 121 HLLVSAL REF RID++ G P +R+ ++ ++ RAMQR+PLLTEAMTRA++FA Sbjct 75 HLLVSALAREFERIDSRGKNPP--GRNPLERMQLILSQITRAMQRDPLLTEAMTRAFMFA 132 Query 122 DASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDV 181 DASAA+EVDQV KL+D +FARAM + EPTEDQ +ARVISDVWLSNL+AWLTRR+SATDV Sbjct 133 DASAAAEVDQVGKLMDRLFARAMTDTEPTEDQLAVARVISDVWLSNLVAWLTRRSSATDV 192 Query 182 SKRLDLAVRLLIGD 195 + RL+L V LL+GD Sbjct 193 ANRLELTVELLLGD 206 >gi|54022411|ref|YP_116653.1| putative transcriptional regulator [Nocardia farcinica IFM 10152] gi|54013919|dbj|BAD55289.1| putative transcriptional regulator [Nocardia farcinica IFM 10152] Length=211 Score = 282 bits (722), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 140/197 (72%), Positives = 170/197 (87%), Gaps = 2/197 (1%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 V L+E EL S AQRERRKRILDAT+A+ASKGGY+AVQMRAVA+RADVAVGTLYRYFPSK Sbjct 17 VTTLSEDELSSAAQRERRKRILDATLALASKGGYDAVQMRAVAERADVAVGTLYRYFPSK 76 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 VHLLVSAL REF + ++K R +AGATP +R++ ++ ++ R MQR+PLLTEAMTRA++F Sbjct 77 VHLLVSALAREFEQFESK--RKPLAGATPRERMHLLLTQITRMMQRDPLLTEAMTRAFMF 134 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 ADASAA+EVD+V K++D +FARAM +GEP E Q IARVISDVWLSNL+AWLTRRASATD Sbjct 135 ADASAAAEVDRVGKVMDRVFARAMNDGEPDERQLAIARVISDVWLSNLVAWLTRRASATD 194 Query 181 VSKRLDLAVRLLIGDQD 197 VS RL+L V LL+GD++ Sbjct 195 VSDRLELTVDLLLGDKE 211 >gi|226304195|ref|YP_002764153.1| TetR family transcriptional regulator [Rhodococcus erythropolis PR4] gi|229494435|ref|ZP_04388198.1| transcriptional regulator, TetR family [Rhodococcus erythropolis SK121] gi|226183310|dbj|BAH31414.1| putative TetR family transcriptional regulator [Rhodococcus erythropolis PR4] gi|229318797|gb|EEN84655.1| transcriptional regulator, TetR family [Rhodococcus erythropolis SK121] Length=212 Score = 280 bits (715), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 137/194 (71%), Positives = 163/194 (85%), Gaps = 2/194 (1%) Query 2 AVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKV 61 A L + +L S AQRERRKRILDAT+A+ASKGGYEAVQMRAVA+RADVAVGTLYRYFPSKV Sbjct 15 ATLGDDDLSSNAQRERRKRILDATLALASKGGYEAVQMRAVAERADVAVGTLYRYFPSKV 74 Query 62 HLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFA 121 HLLVSAL REF +ID+K G +P +R+ ++ + RAMQR+PLLTEAMTRA++FA Sbjct 75 HLLVSALAREFEKIDSKG--KIPPGTSPLERMQLILSLITRAMQRDPLLTEAMTRAFMFA 132 Query 122 DASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDV 181 DASAA+EVDQV +L+D +FARAM EPTE+Q IARVISDVWLSNL+AWLTRR+SATDV Sbjct 133 DASAAAEVDQVGQLMDRLFARAMTEEEPTEEQLAIARVISDVWLSNLVAWLTRRSSATDV 192 Query 182 SKRLDLAVRLLIGD 195 + RL+L V LL+GD Sbjct 193 ANRLELTVELLLGD 206 >gi|343925841|ref|ZP_08765356.1| putative TetR family transcriptional regulator [Gordonia alkanivorans NBRC 16433] gi|343764192|dbj|GAA12282.1| putative TetR family transcriptional regulator [Gordonia alkanivorans NBRC 16433] Length=216 Score = 258 bits (659), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 128/190 (68%), Positives = 156/190 (83%), Gaps = 1/190 (0%) Query 8 ELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSA 67 E GS AQRERR+RILDAT+A+ASKGGY+AVQMR VAD+ADVAVGTLYRYFPSKVHLLV+A Sbjct 25 EAGSTAQRERRRRILDATLALASKGGYDAVQMRTVADKADVAVGTLYRYFPSKVHLLVTA 84 Query 68 LGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAAS 127 L REF R+++K DRS + G T RL ++ + AMQR+PLLTEAMTRA++FADASA + Sbjct 85 LAREFERVESKVDRSQLRGDTAIDRLRHVLDMITFAMQRDPLLTEAMTRAFMFADASATA 144 Query 128 EVDQVEKLIDSMFARAMAN-GEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLD 186 EVDQV +ID + A A+ GEPTE+ IARV+SDVW+SNL+ WLTRRASATDV+ RL+ Sbjct 145 EVDQVAGIIDRLLAGAIVGVGEPTEEDLAIARVLSDVWMSNLVQWLTRRASATDVTNRLE 204 Query 187 LAVRLLIGDQ 196 L VRLL+ D+ Sbjct 205 LTVRLLLKDR 214 >gi|262200879|ref|YP_003272087.1| TetR family transcriptional regulator [Gordonia bronchialis DSM 43247] gi|262084226|gb|ACY20194.1| regulatory protein TetR [Gordonia bronchialis DSM 43247] Length=219 Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 123/190 (65%), Positives = 156/190 (83%), Gaps = 1/190 (0%) Query 8 ELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSA 67 E GS AQRERR+RILDAT+A+ASKGGY+AVQMR VAD+ADVAVGTLYRYFPSKVHLLV++ Sbjct 26 EAGSSAQRERRRRILDATLALASKGGYDAVQMRTVADKADVAVGTLYRYFPSKVHLLVTS 85 Query 68 LGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAAS 127 L RE R+++K DRS + G +RL ++ + AMQR+PLLTEAMTRA++FADASA + Sbjct 86 LARELGRVESKVDRSQLRGDNAIERLRHVLDMITFAMQRDPLLTEAMTRAFMFADASATA 145 Query 128 EVDQVEKLIDSMFARAMAN-GEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLD 186 EVDQV +ID + A A+ + GEPT++ IARV++DVW+SNL+ WLTRRASATDV+ RL+ Sbjct 146 EVDQVASIIDRLLAGAIVDEGEPTDEDLAIARVLADVWMSNLVQWLTRRASATDVTNRLE 205 Query 187 LAVRLLIGDQ 196 L VRLL+ D+ Sbjct 206 LTVRLLLKDR 215 >gi|319948640|ref|ZP_08022764.1| TetR family transcriptional regulator [Dietzia cinnamea P4] gi|319437721|gb|EFV92717.1| TetR family transcriptional regulator [Dietzia cinnamea P4] Length=242 Score = 251 bits (641), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 122/191 (64%), Positives = 157/191 (83%), Gaps = 0/191 (0%) Query 8 ELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSA 67 E + +QRERR+RILDAT+A+A+KGGYEAVQMRAVA++A+VAVGTLYRYFPSKVHLLVSA Sbjct 22 EPSTSSQRERRRRILDATLALAAKGGYEAVQMRAVAEKAEVAVGTLYRYFPSKVHLLVSA 81 Query 68 LGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAAS 127 L REF R+D +T+RSA G T +R+ +V + ++MQR+P LTEAMTRA++FADA+ A+ Sbjct 82 LAREFRRLDQRTERSAPPGDTAQERMKVVVDMITKSMQRDPNLTEAMTRAFMFADATVAN 141 Query 128 EVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDL 187 EV++V L+D + ARA+A GEP E Q IARVISDVW+SNL++WLTRR+SA DV+ RL L Sbjct 142 EVEEVGFLMDRIIARALAQGEPDELQLSIARVISDVWMSNLVSWLTRRSSAADVASRLAL 201 Query 188 AVRLLIGDQDS 198 + LL+G DS Sbjct 202 TIDLLLGTDDS 212 >gi|326384610|ref|ZP_08206289.1| regulatory protein TetR [Gordonia neofelifaecis NRRL B-59395] gi|326196744|gb|EGD53939.1| regulatory protein TetR [Gordonia neofelifaecis NRRL B-59395] Length=220 Score = 248 bits (633), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 123/199 (62%), Positives = 161/199 (81%), Gaps = 6/199 (3%) Query 4 LAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHL 63 L+ +E+GS AQRERR+RILDAT+A+ASKGGY+AVQMRAVAD+ADVAVGTLYRYFPSKVHL Sbjct 23 LSGAEVGSAAQRERRRRILDATLALASKGGYDAVQMRAVADKADVAVGTLYRYFPSKVHL 82 Query 64 LVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADA 123 LV+AL RE +++++ DR+ + G T +RL F++ + AMQ++PLLTEAMTRA++FADA Sbjct 83 LVTALARELEKVESRADRNVLLGDTAVERLRFVLDMITLAMQKDPLLTEAMTRAFMFADA 142 Query 124 SAASEVDQVEKLIDSMFARAMAN-----GEPTEDQYHIARVISDVWLSNLLAWLTRRASA 178 SA SEV++V +ID + A AM + EP+ IARVISDVW+SNL+ WLTRRASA Sbjct 143 SATSEVNRVATIIDRLLAGAMIDDSDPKAEPSAQDLAIARVISDVWMSNLVQWLTRRASA 202 Query 179 TDVSKRLDLAVRLLIGDQD 197 TDV+ R++L V+LL+ D+D Sbjct 203 TDVTNRMELTVKLLL-DRD 220 >gi|159038396|ref|YP_001537649.1| TetR family transcriptional regulator [Salinispora arenicola CNS-205] gi|157917231|gb|ABV98658.1| transcriptional regulator, TetR family [Salinispora arenicola CNS-205] Length=206 Score = 237 bits (605), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 113/180 (63%), Positives = 148/180 (83%), Gaps = 0/180 (0%) Query 4 LAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHL 63 L+++E GS AQRERR+RILDAT+ +ASKGGY+AVQMRAVA+ ADVA+GTLYRYFPSK+HL Sbjct 16 LSDAEQGSAAQRERRRRILDATLVLASKGGYDAVQMRAVAEHADVALGTLYRYFPSKIHL 75 Query 64 LVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADA 123 LVSAL REF R + R+A+ G TP +R F++G++ RAMQR+P+LTEAMTRA++FAD Sbjct 76 LVSALAREFERTQDRLRRTAIPGETPHERTVFVLGRVTRAMQRDPMLTEAMTRAFMFADP 135 Query 124 SAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSK 183 +AA+EV+ V +L++ MF AM +G+P+ D ARVI DVWLS+L+AW+TRRASA DV + Sbjct 136 TAAAEVNVVARLMEDMFIMAMRDGKPSADDRAKARVIGDVWLSSLVAWVTRRASANDVHE 195 >gi|145595150|ref|YP_001159447.1| regulatory protein TetR [Salinispora tropica CNB-440] gi|145304487|gb|ABP55069.1| transcriptional regulator, TetR family [Salinispora tropica CNB-440] Length=206 Score = 234 bits (598), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 111/180 (62%), Positives = 146/180 (82%), Gaps = 0/180 (0%) Query 4 LAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHL 63 L ++E GS AQRERR+RILDAT+ +AS+GGY+AVQMRAVA+ A+VA+GTLYRYFPSK+HL Sbjct 16 LTDAEQGSAAQRERRRRILDATLVLASRGGYDAVQMRAVAEHANVALGTLYRYFPSKIHL 75 Query 64 LVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADA 123 LVSAL REF R + R+A+ G TP +R F++G++ RAMQR+P+LTEAMTRA++FAD Sbjct 76 LVSALAREFERTQDRLRRTAIPGETPHERTAFVLGRVTRAMQRDPMLTEAMTRAFMFADP 135 Query 124 SAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSK 183 +AA+EV+ V +L++ MF AM G+P+ D ARVI DVWLS+L+AW+TRRASA DV + Sbjct 136 TAATEVNAVARLMEDMFILAMREGKPSADDRAKARVIGDVWLSSLVAWVTRRASANDVHE 195 >gi|300784407|ref|YP_003764698.1| TetR family transcriptional regulator [Amycolatopsis mediterranei U32] gi|299793921|gb|ADJ44296.1| TetR family transcriptional regulator [Amycolatopsis mediterranei U32] gi|340525828|gb|AEK41033.1| TetR family transcriptional regulator [Amycolatopsis mediterranei S699] Length=208 Score = 231 bits (590), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 118/193 (62%), Positives = 157/193 (82%), Gaps = 0/193 (0%) Query 1 VAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSK 60 ++ + ELGS AQR+RR+RI+DAT+A+ASKGGY+AVQMRAVA++ADVA+GTLYRYFPSK Sbjct 14 LSAIGADELGSAAQRDRRRRIIDATLALASKGGYDAVQMRAVAEKADVALGTLYRYFPSK 73 Query 61 VHLLVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVF 120 +HLLVS L REF R K +R A+ G TP +RL F++G+ R MQR+P LTEAM RA++F Sbjct 74 IHLLVSGLAREFERAQEKLERQAIPGDTPAERLMFVLGRNTRLMQRDPHLTEAMVRAFMF 133 Query 121 ADASAASEVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 AD SAA+EV+QV +L+++MFA+AM EPTE I V++DVW++NL+AW+TRRASA D Sbjct 134 ADTSAAAEVEQVGRLMENMFAKAMGIAEPTEADRDIFHVVADVWMANLVAWVTRRASAAD 193 Query 181 VSKRLDLAVRLLI 193 V+ RL+L+V LL+ Sbjct 194 VANRLELSVHLLL 206 >gi|296141462|ref|YP_003648705.1| TetR family transcriptional regulator [Tsukamurella paurometabola DSM 20162] gi|296029596|gb|ADG80366.1| transcriptional regulator, TetR family [Tsukamurella paurometabola DSM 20162] Length=208 Score = 221 bits (562), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 107/188 (57%), Positives = 148/188 (79%), Gaps = 0/188 (0%) Query 8 ELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSA 67 EL + QRERRKRI+DAT+A+A KGGY+AVQMRAVA +ADVA+GTLYRYFPSKVHLLV+ Sbjct 21 ELDTAGQRERRKRIIDATLALARKGGYDAVQMRAVAKKADVALGTLYRYFPSKVHLLVAG 80 Query 68 LGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAAS 127 L +F R + ++ V G T +RL F++ + +A+QR PLLTEAM RA++FADA+AA+ Sbjct 81 LVSQFERAGERIGKATVPGDTAAERLMFVLERNTQALQRAPLLTEAMVRAFMFADATAAA 140 Query 128 EVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDL 187 EV++V +L++ MFA A+ +PT++Q +I+DVW++NL+AW+T RASA++V KRL + Sbjct 141 EVERVGRLLEGMFAHALGVEDPTDEQRDTFHLIADVWMANLVAWVTHRASASEVQKRLGV 200 Query 188 AVRLLIGD 195 AV+LLI D Sbjct 201 AVKLLIKD 208 >gi|302525634|ref|ZP_07277976.1| transcriptional regulator [Streptomyces sp. AA4] gi|302434529|gb|EFL06345.1| transcriptional regulator [Streptomyces sp. AA4] Length=210 Score = 221 bits (562), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 114/186 (62%), Positives = 150/186 (81%), Gaps = 0/186 (0%) Query 8 ELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSA 67 ELGS AQR+RR+RI+DAT+A+ASKGGY+AVQMRAVA++ADVA+GTLYRYFPSK+HLLVS Sbjct 23 ELGSAAQRDRRRRIIDATLALASKGGYDAVQMRAVAEKADVALGTLYRYFPSKIHLLVSG 82 Query 68 LGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAAS 127 L ++F K RSA+ G TP +RL F++G+ R MQR+P LTEAM RA++FAD SAA+ Sbjct 83 LAQQFEAAHEKIQRSAIPGETPAERLMFVLGRNTRLMQRDPHLTEAMVRAFMFADTSAAA 142 Query 128 EVDQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDL 187 EV+ V +L++ MFA AM +PTE I V++DVW++NL+AW+TRRASA DV+ RL+L Sbjct 143 EVELVGRLMEDMFASAMGIEDPTESDRDIFHVVADVWMANLVAWVTRRASAADVASRLEL 202 Query 188 AVRLLI 193 +V LL+ Sbjct 203 SVHLLL 208 >gi|333918572|ref|YP_004492153.1| transcriptional regulator [Amycolicicoccus subflavus DQS3-9A1] gi|333480793|gb|AEF39353.1| Transcriptional regulator [Amycolicicoccus subflavus DQS3-9A1] Length=208 Score = 218 bits (556), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 108/184 (59%), Positives = 138/184 (75%), Gaps = 0/184 (0%) Query 10 GSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALG 69 GS AQRERRKRILDAT+A+A+KGG+EAVQMRAVA+ A VA+GTLYRYFPSK+HLLV+AL Sbjct 22 GSAAQRERRKRILDATLALAAKGGFEAVQMRAVAENAGVALGTLYRYFPSKIHLLVAALA 81 Query 70 REFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEV 129 +EF K DRS + G T RL ++ + AMQRNP LTEAM RA++FAD + A EV Sbjct 82 QEFQVAGEKLDRSKIPGETAADRLLYVFERNTTAMQRNPNLTEAMVRAFMFADTTVALEV 141 Query 130 DQVEKLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDLAV 189 +QV +L++ MFARA PTE I +I+D W++NL+AW+T R S+ DV R++LAV Sbjct 142 EQVGQLMEDMFARAAGIDNPTEHDRAIFHLIADTWMANLIAWVTHRVSSADVHHRIELAV 201 Query 190 RLLI 193 RLL+ Sbjct 202 RLLL 205 >gi|311744306|ref|ZP_07718110.1| TetR family transcriptional regulator [Aeromicrobium marinum DSM 15272] gi|311312479|gb|EFQ82392.1| TetR family transcriptional regulator [Aeromicrobium marinum DSM 15272] Length=196 Score = 212 bits (539), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 103/188 (55%), Positives = 140/188 (75%), Gaps = 4/188 (2%) Query 10 GSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALG 69 GS AQRERR+RILDAT+A+A +GG++AVQMRAVAD ADVA+GTLYRYFPSK+HLLV+AL Sbjct 8 GSTAQRERRRRILDATIALADQGGFDAVQMRAVADDADVALGTLYRYFPSKIHLLVTALS 67 Query 70 REFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEV 129 R+F R+ ++ + V G TP +R+ ++G RA+Q+ P LTEA+TRA++FADAS A+E+ Sbjct 68 RQFERVQEQSSKRQVPGETPHERVMHVLGVTTRALQKQPQLTEALTRAFMFADASVAAEI 127 Query 130 DQVEKLIDSMFARAMANG----EPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRL 185 +V + S+ A+ EPTE+ I RVI DVWLS L+ W+T R SA +V + + Sbjct 128 HEVGMRMTSIITHAIDGTDETREPTEEDTAIVRVIGDVWLSALMGWVTGRTSAAEVMRSM 187 Query 186 DLAVRLLI 193 D+AVRLL+ Sbjct 188 DVAVRLLL 195 >gi|119717024|ref|YP_923989.1| TetR family transcriptional regulator [Nocardioides sp. JS614] gi|119537685|gb|ABL82302.1| transcriptional regulator, TetR family [Nocardioides sp. JS614] Length=201 Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 107/195 (55%), Positives = 141/195 (73%), Gaps = 3/195 (1%) Query 4 LAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHL 63 L ELGS AQR+RRKRILDAT+A+AS+GG++AVQMRAVA++ADVA+GTLYRYFPSK+HL Sbjct 7 LTVDELGSAAQRDRRKRILDATIALASQGGFDAVQMRAVAEQADVALGTLYRYFPSKIHL 66 Query 64 LVSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADA 123 LVSAL REF R + V G T R+ ++ + R MQ +P LTEA+TRA++FADA Sbjct 67 LVSALQREFERTELALRERPVEGDTTADRVINVLKRTTRGMQSDPKLTEALTRAFMFADA 126 Query 124 SAASEVDQVEKLIDSMFARAM---ANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATD 180 S +E+ QV L+ SM R M + E TE+ IA+VI DVWLS L+ W+T R SA + Sbjct 127 SVQAEIHQVGMLLTSMLTRVMRPEDHDELTEEDVAIAKVIGDVWLSALVGWVTGRNSAAE 186 Query 181 VSKRLDLAVRLLIGD 195 +++++AVRLL+ D Sbjct 187 TGQQIEVAVRLLLRD 201 >gi|326331722|ref|ZP_08198010.1| transcriptional regulator, TetR family [Nocardioidaceae bacterium Broad-1] gi|325950521|gb|EGD42573.1| transcriptional regulator, TetR family [Nocardioidaceae bacterium Broad-1] Length=211 Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 98/188 (53%), Positives = 140/188 (75%), Gaps = 4/188 (2%) Query 10 GSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALG 69 GS AQRERR+RILDAT+ +A++GG++AVQMRAVA++A+VA+GTLYRYFPSK+HLLVSAL Sbjct 23 GSAAQRERRRRILDATITLAAEGGFDAVQMRAVAEQAEVALGTLYRYFPSKIHLLVSALA 82 Query 70 REFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEV 129 REF++ ++ A G T +R+ +++ + RA+Q+ P LTEA+ RA++FAD S E+ Sbjct 83 REFTKDVERSAVRATPGDTAHERIMYVLNRRTRALQKQPKLTEALVRAFMFADQSVTGEI 142 Query 130 DQVEKLIDSMFARAMA----NGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRL 185 +V + ++ ARAM +GE TE++ I R+ISDVWLS L++W+T R DV K + Sbjct 143 HEVGTSLTTVIARAMHGTPDHGEVTEEEAAIIRIISDVWLSALISWVTGRMDTEDVEKSI 202 Query 186 DLAVRLLI 193 D+AVRLL+ Sbjct 203 DVAVRLLL 210 >gi|145225159|ref|YP_001135837.1| TetR family transcriptional regulator [Mycobacterium gilvum PYR-GCK] gi|145217645|gb|ABP47049.1| transcriptional regulator, TetR family [Mycobacterium gilvum PYR-GCK] Length=223 Score = 174 bits (441), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 87/173 (51%), Positives = 118/173 (69%), Gaps = 1/173 (0%) Query 21 ILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALGREFSRIDAKTD 80 ILDA + +A+ GGYEAVQMR VA+R +AVGTLYRYFP+K HLLV+AL REF R+D+ D Sbjct 42 ILDAALTVAAAGGYEAVQMRTVAERVGIAVGTLYRYFPAKTHLLVAALTREFRRLDSAGD 101 Query 81 RSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEVDQVEKLIDSMF 140 ++ G P +RL + L+ QR+P LT AMTRA+ AD AA+E+D+ I + Sbjct 102 WASGEGP-PLERLERLTAHLHDRWQRDPRLTTAMTRAFAVADTRAAAELDRAADEIQILL 160 Query 141 ARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDLAVRLLI 193 AR + GEPT H+A VISD+WL+NL+A+ RA+A D +R+D A R ++ Sbjct 161 ARTLRGGEPTPTDLHVAGVISDIWLANLVAFSGHRATAADTRERIDRATRRVV 213 >gi|108801802|ref|YP_641999.1| TetR family transcriptional regulator [Mycobacterium sp. MCS] gi|119870954|ref|YP_940906.1| TetR family transcriptional regulator [Mycobacterium sp. KMS] gi|108772221|gb|ABG10943.1| transcriptional regulator, TetR family [Mycobacterium sp. MCS] gi|119697043|gb|ABL94116.1| transcriptional regulator, TetR family [Mycobacterium sp. KMS] Length=223 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 89/173 (52%), Positives = 122/173 (71%), Gaps = 1/173 (0%) Query 21 ILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALGREFSRIDAKTD 80 I+DA +A+A+ GGY+AV MR VA+R +AVGTLYRY+P+K HLLV+AL REF R+D D Sbjct 42 IMDAALAVAATGGYDAVHMRTVAERVGIAVGTLYRYYPAKTHLLVAALTREFQRLDVSGD 101 Query 81 RSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEVDQVEKLIDSMF 140 S+ AG TP QRL+ + L+ QR+PLLT+AMTRA+ AD AA+E+D+ I+ + Sbjct 102 WSSGAG-TPQQRLDRLTAHLHDRWQRDPLLTDAMTRAFAVADTRAAAELDRAAATIEILL 160 Query 141 ARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDLAVRLLI 193 AR + GEPT +A VISD+WL+NL+A+++ R SA D R+D A R +I Sbjct 161 ARTLGGGEPTPADLCVAGVISDIWLANLVAFISGRVSAADTRDRIDRATRRVI 213 >gi|315443032|ref|YP_004075911.1| TetR family transcriptional regulator [Mycobacterium sp. Spyr1] gi|315261335|gb|ADT98076.1| transcriptional regulator, TetR family [Mycobacterium sp. Spyr1] Length=223 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 89/173 (52%), Positives = 119/173 (69%), Gaps = 1/173 (0%) Query 21 ILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALGREFSRIDAKTD 80 ILDA +A+A+ GGYEAVQMR VA+R +AVGTLYRYFP+K HLLV+AL REF R+D+ D Sbjct 42 ILDAALAVAAAGGYEAVQMRTVAERVGIAVGTLYRYFPAKTHLLVAALTREFRRLDSAGD 101 Query 81 RSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEVDQVEKLIDSMF 140 + G TP +RL + L+ QR+P LT AMTRA+ AD AA+E+D+ I + Sbjct 102 WAGGEG-TPLERLERLTAHLHDRWQRDPWLTTAMTRAFAVADTRAAAELDRAADEIQILL 160 Query 141 ARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDLAVRLLI 193 AR + GEPT H+A VISD+WL+NL+A+ RA+A D +R+D A R ++ Sbjct 161 ARTLRGGEPTPADLHVAGVISDIWLANLVAFSGDRATAADTRERIDRATRRVV 213 >gi|120401346|ref|YP_951175.1| TetR family transcriptional regulator [Mycobacterium vanbaalenii PYR-1] gi|119954164|gb|ABM11169.1| transcriptional regulator, TetR family [Mycobacterium vanbaalenii PYR-1] Length=223 Score = 167 bits (423), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 89/173 (52%), Positives = 118/173 (69%), Gaps = 1/173 (0%) Query 21 ILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALGREFSRIDAKTD 80 ILDA +A+A+ GGYEAVQMR VA+R +AVGTLYRYFP+K HLLV+AL REF R+D+ D Sbjct 42 ILDAALAVAAAGGYEAVQMRTVAERVGIAVGTLYRYFPAKTHLLVAALTREFRRLDSAGD 101 Query 81 RSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEVDQVEKLIDSMF 140 + G TP +RL + L+ QR+P LT AMTRA+ AD AA+E+D+ I + Sbjct 102 WAGGEG-TPLERLERLTAHLHDRWQRDPWLTTAMTRAFAVADTRAAAELDRAADEIQILL 160 Query 141 ARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDLAVRLLI 193 AR + GEPT H+A VISD+WL+NL+A+ RA+A D R+D A R ++ Sbjct 161 ARTLRGGEPTPADLHVAGVISDIWLANLVAFSGDRATAADTRDRIDRATRRVV 213 >gi|111021851|ref|YP_704823.1| TetR family transcriptional regulator [Rhodococcus jostii RHA1] gi|110821381|gb|ABG96665.1| probable transcriptional regulator, TetR family protein [Rhodococcus jostii RHA1] Length=233 Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 82/180 (46%), Positives = 124/180 (69%), Gaps = 0/180 (0%) Query 14 QRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALGREFS 73 QRER +RI+ A M +AS+GGY+AVQMRA+ADRA VA+GT+YRYFPSK H+LV L F Sbjct 49 QRERYQRIVAAAMELASEGGYDAVQMRAIADRAGVALGTVYRYFPSKNHMLVMGLLMVFE 108 Query 74 RIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEVDQVE 133 + ++ + A+ G TP +R+ F++ K ++++ EA+ RA++FADASA++E+D Sbjct 109 GMRSRFEDVAIPGDTPSERILFVLRKNTEVLEKDRPRYEALVRAFMFADASASAELDAFG 168 Query 134 KLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDLAVRLLI 193 L+ MFA+ + + ++DQ + RVI DVW+S+L++W+ R S +V L LAVRL+ Sbjct 169 ALMTEMFAKTIGVEQISDDQLNAIRVIGDVWMSSLVSWVAGRISVDEVMAHLGLAVRLVF 228 >gi|226364370|ref|YP_002782152.1| TetR family transcriptional regulator [Rhodococcus opacus B4] gi|226242859|dbj|BAH53207.1| putative TetR family transcriptional regulator [Rhodococcus opacus B4] Length=217 Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 81/180 (45%), Positives = 123/180 (69%), Gaps = 0/180 (0%) Query 14 QRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALGREFS 73 QRER +RI+ A M +AS+GGY+AVQMRA+ADRA VA+GT+YRYFPSK H+LV L F Sbjct 33 QRERYQRIVAAAMELASEGGYDAVQMRAIADRAGVALGTVYRYFPSKNHMLVMGLLMVFE 92 Query 74 RIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEVDQVE 133 + ++ + + G TP +R+ F++ K ++++ EA+ RA++FADASA++E+D Sbjct 93 GMRSRFEDVTIPGDTPSERILFVLRKNTEVLEKDRPRYEALVRAFMFADASASAELDAFG 152 Query 134 KLIDSMFARAMANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDLAVRLLI 193 L+ MFA+ + + ++DQ + RVI DVW+S+L++W+ R S +V L LAVRL+ Sbjct 153 ALMTEMFAKTIGVEQISDDQLNAIRVIGDVWMSSLVSWVAGRISVDEVMAHLGLAVRLVF 212 Lambda K H 0.320 0.130 0.355 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 215040480604 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40