BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3582c
Length=231
Score E
Sequences producing significant alignments: (Bits) Value
gi|332138210|pdb|3Q7U|A Chain A, Structure Of Mtb 2-C-Methyl-D-E... 445 2e-123
gi|15610718|ref|NP_218099.1| 2-C-methyl-D-erythritol 4-phosphate... 444 5e-123
gi|289755711|ref|ZP_06515089.1| 2-C-methyl-D-erythritol 4-phosph... 443 1e-122
gi|31794759|ref|NP_857252.1| 2-C-methyl-D-erythritol 4-phosphate... 442 2e-122
gi|330689308|pdb|2XWN|A Chain A, Crystal Structure Of Ispd From ... 439 2e-121
gi|240172168|ref|ZP_04750827.1| 2-C-methyl-D-erythritol 4-phosph... 332 2e-89
gi|183985050|ref|YP_001853341.1| 4-diphosphocytidyl-2C-methyl-D-... 313 1e-83
gi|342862420|ref|ZP_08719060.1| 2-C-methyl-D-erythritol 4-phosph... 301 6e-80
gi|296166637|ref|ZP_06849064.1| 2-C-methyl-D-erythritol 4-phosph... 294 9e-78
gi|118619337|ref|YP_907669.1| 2-C-methyl-D-erythritol 4-phosphat... 289 3e-76
gi|41406574|ref|NP_959410.1| 2-C-methyl-D-erythritol 4-phosphate... 287 9e-76
gi|336458470|gb|EGO37443.1| 2-C-methyl-D-erythritol 4-phosphate ... 285 4e-75
gi|126437689|ref|YP_001073380.1| 2-C-methyl-D-erythritol 4-phosp... 279 2e-73
gi|118464741|ref|YP_879851.1| 2-C-methyl-D-erythritol 4-phosphat... 276 2e-72
gi|254822711|ref|ZP_05227712.1| 2-C-methyl-D-erythritol 4-phosph... 274 7e-72
gi|108801702|ref|YP_641899.1| 2-C-methyl-D-erythritol 4-phosphat... 273 1e-71
gi|333992514|ref|YP_004525128.1| 4-diphosphocytidyl-2C-methyl-D-... 271 8e-71
gi|15827085|ref|NP_301348.1| 2-C-methyl-D-erythritol 4-phosphate... 259 3e-67
gi|118469696|ref|YP_890298.1| 2-C-methyl-D-erythritol 4-phosphat... 251 6e-65
gi|330689304|pdb|2XWL|A Chain A, Crystal Structure Of Ispd From ... 251 8e-65
gi|254773529|ref|ZP_05215045.1| 2-C-methyl-D-erythritol 4-phosph... 241 6e-62
gi|111021432|ref|YP_704404.1| 2-C-methyl-D-erythritol 4-phosphat... 223 2e-56
gi|226363788|ref|YP_002781570.1| 2-C-methyl-D-erythritol 4-phosp... 219 2e-55
gi|226304176|ref|YP_002764134.1| 2-C-methyl-D-erythritol 4-phosp... 215 3e-54
gi|229494289|ref|ZP_04388052.1| 2-C-methyl-D-erythritol 4-phosph... 215 4e-54
gi|54022400|ref|YP_116642.1| 2-C-methyl-D-erythritol 4-phosphate... 206 3e-51
gi|296138336|ref|YP_003645579.1| 2-C-methyl-D-erythritol 4-phosp... 203 2e-50
gi|312138098|ref|YP_004005434.1| 2-c-methyl-d-erythritol 4-phosp... 195 4e-48
gi|326383078|ref|ZP_08204767.1| 2-C-methyl-D-erythritol 4-phosph... 185 6e-45
gi|296118941|ref|ZP_06837514.1| 2-C-methyl-D-erythritol 4-phosph... 184 7e-45
gi|169627672|ref|YP_001701321.1| putative 2-C-methyl-D-erythrito... 184 1e-44
gi|134097052|ref|YP_001102713.1| 4-diphosphocytidyl-2C-methyl-D-... 179 3e-43
gi|337291591|ref|YP_004630612.1| 4-diphosphocytidyl-2C-methyl-D-... 177 1e-42
gi|325674998|ref|ZP_08154685.1| 2-C-methyl-D-erythritol 4-phosph... 177 1e-42
gi|293194139|ref|ZP_06609940.1| 2-C-methyl-D-erythritol 4-phosph... 176 2e-42
gi|19553857|ref|NP_601859.1| 2-C-methyl-D-erythritol 4-phosphate... 176 3e-42
gi|25029077|ref|NP_739131.1| 2-C-methyl-D-erythritol 4-phosphate... 176 4e-42
gi|227834037|ref|YP_002835744.1| 4-diphosphocytidyl-2-C-methyl-D... 175 4e-42
gi|227505966|ref|ZP_03936015.1| 2-C-methyl-D-erythritol 4-phosph... 175 4e-42
gi|145296657|ref|YP_001139478.1| 2-C-methyl-D-erythritol 4-phosp... 175 5e-42
gi|288923579|ref|ZP_06417691.1| 2-C-methyl-D-erythritol 4-phosph... 174 8e-42
gi|154508492|ref|ZP_02044134.1| hypothetical protein ACTODO_0099... 174 1e-41
gi|331699818|ref|YP_004336057.1| 2-C-methyl-D-erythritol 4-phosp... 172 2e-41
gi|158312227|ref|YP_001504735.1| 2-C-methyl-D-erythritol 4-phosp... 172 3e-41
gi|256374518|ref|YP_003098178.1| 2-C-methyl-D-erythritol 4-phosp... 172 4e-41
gi|227540999|ref|ZP_03971048.1| 2-C-methyl-D-erythritol 4-phosph... 172 5e-41
gi|227489405|ref|ZP_03919721.1| 2-C-methyl-D-erythritol 4-phosph... 171 6e-41
gi|227496788|ref|ZP_03927059.1| 2-C-methyl-D-erythritol 4-phosph... 171 8e-41
gi|300780459|ref|ZP_07090315.1| 2-C-methyl-D-erythritol 4-phosph... 171 9e-41
gi|300859177|ref|YP_003784160.1| 4-diphosphocytidyl-2C-methyl-D-... 171 9e-41
>gi|332138210|pdb|3Q7U|A Chain A, Structure Of Mtb 2-C-Methyl-D-Erythritol 4-Phosphate
Cytidyltransferase (Ispd) Complexed With Ctp
gi|332138211|pdb|3Q7U|B Chain B, Structure Of Mtb 2-C-Methyl-D-Erythritol 4-Phosphate
Cytidyltransferase (Ispd) Complexed With Ctp
gi|332138212|pdb|3Q80|A Chain A, Structure Of Mtb 2-C-Methyl-D-Erythritol 4-Phosphate
Cytidyltransferase (Ispd) Complexed With Cdp-Me
gi|332138213|pdb|3Q80|B Chain B, Structure Of Mtb 2-C-Methyl-D-Erythritol 4-Phosphate
Cytidyltransferase (Ispd) Complexed With Cdp-Me
Length=231
Score = 445 bits (1145), Expect = 2e-123, Method: Compositional matrix adjust.
Identities = 231/231 (100%), Positives = 231/231 (100%), Gaps = 0/231 (0%)
Query 1 VVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPA 60
VVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPA
Sbjct 1 VVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPA 60
Query 61 DRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVAR 120
DRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVAR
Sbjct 61 DRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVAR 120
Query 121 VVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQR 180
VVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQR
Sbjct 121 VVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQR 180
Query 181 GSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG 231
GSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG
Sbjct 181 GSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG 231
>gi|15610718|ref|NP_218099.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
tuberculosis H37Rv]
gi|15843195|ref|NP_338232.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
tuberculosis CDC1551]
gi|121639502|ref|YP_979726.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
bovis BCG str. Pasteur 1173P2]
84 more sequence titles
Length=231
Score = 444 bits (1142), Expect = 5e-123, Method: Compositional matrix adjust.
Identities = 230/231 (99%), Positives = 231/231 (100%), Gaps = 0/231 (0%)
Query 1 VVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPA 60
+VREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPA
Sbjct 1 MVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPA 60
Query 61 DRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVAR 120
DRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVAR
Sbjct 61 DRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVAR 120
Query 121 VVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQR 180
VVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQR
Sbjct 121 VVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQR 180
Query 181 GSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG 231
GSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG
Sbjct 181 GSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG 231
>gi|289755711|ref|ZP_06515089.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
tuberculosis EAS054]
gi|289696298|gb|EFD63727.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
tuberculosis EAS054]
Length=231
Score = 443 bits (1139), Expect = 1e-122, Method: Compositional matrix adjust.
Identities = 229/231 (99%), Positives = 231/231 (100%), Gaps = 0/231 (0%)
Query 1 VVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPA 60
+VREAGEVVAIVPAAGSGERLAVG+PKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPA
Sbjct 1 MVREAGEVVAIVPAAGSGERLAVGLPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPA 60
Query 61 DRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVAR 120
DRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVAR
Sbjct 61 DRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVAR 120
Query 121 VVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQR 180
VVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQR
Sbjct 121 VVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQR 180
Query 181 GSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG 231
GSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG
Sbjct 181 GSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG 231
>gi|31794759|ref|NP_857252.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
bovis AF2122/97]
gi|51701562|sp|Q7TW54.1|ISPD_MYCBO RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;
AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol
synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT
gi|31620356|emb|CAD95799.1| PROBABLE 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOL SYNTHASE ISPD
(MEP CYTIDYLYLTRANSFERASE) (MCT) [Mycobacterium bovis AF2122/97]
Length=231
Score = 442 bits (1136), Expect = 2e-122, Method: Compositional matrix adjust.
Identities = 229/231 (99%), Positives = 230/231 (99%), Gaps = 0/231 (0%)
Query 1 VVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPA 60
+VREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPA
Sbjct 1 MVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPA 60
Query 61 DRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVAR 120
DRTDEARQILGHRAMIVAGGSNRTDTVNLAL VLSGTAEPEFVLVHDAARALTPPALVAR
Sbjct 61 DRTDEARQILGHRAMIVAGGSNRTDTVNLALAVLSGTAEPEFVLVHDAARALTPPALVAR 120
Query 121 VVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQR 180
VVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQR
Sbjct 121 VVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQR 180
Query 181 GSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG 231
GSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG
Sbjct 181 GSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG 231
>gi|330689308|pdb|2XWN|A Chain A, Crystal Structure Of Ispd From Mycobacterium Tuberculosis
In Complex With Ctp And Mg
gi|330689309|pdb|2XWN|B Chain B, Crystal Structure Of Ispd From Mycobacterium Tuberculosis
In Complex With Ctp And Mg
Length=233
Score = 439 bits (1129), Expect = 2e-121, Method: Compositional matrix adjust.
Identities = 228/230 (99%), Positives = 229/230 (99%), Gaps = 0/230 (0%)
Query 1 VVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPA 60
+VREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPA
Sbjct 1 MVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPA 60
Query 61 DRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVAR 120
DRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVAR
Sbjct 61 DRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVAR 120
Query 121 VVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQR 180
VVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQR
Sbjct 121 VVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQR 180
Query 181 GSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVR 230
GSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV
Sbjct 181 GSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVH 230
>gi|240172168|ref|ZP_04750827.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
kansasii ATCC 12478]
Length=226
Score = 332 bits (851), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 181/226 (81%), Positives = 201/226 (89%), Gaps = 5/226 (2%)
Query 6 GEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDE 65
G VVAIVPAAGSGERLAVGVPKAFYQLDGQTL+ERAV+GLL+S VVD VVVAVP+DRTDE
Sbjct 6 GPVVAIVPAAGSGERLAVGVPKAFYQLDGQTLVERAVEGLLESKVVDNVVVAVPSDRTDE 65
Query 66 ARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEAL 125
A+ ILGH+AMIVAGG+NRT+TV LAL+ L T+EP FVLVHDAARALTPP+LVARVV AL
Sbjct 66 AKLILGHKAMIVAGGANRTETVRLALSALV-TSEPSFVLVHDAARALTPPSLVARVVNAL 124
Query 126 RDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDL 185
R G+ AVVP LPL+DTIKAVDANG+VLGTPERAGLRAVQTPQGF DLL R+YQ
Sbjct 125 RAGHVAVVPALPLTDTIKAVDANGMVLGTPERAGLRAVQTPQGFAGDLLRRAYQHAD--- 181
Query 186 PAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG 231
A++TDDASLVEHIGGQVQVV+GDPLAFKIT +LDLLLAQA+VRG
Sbjct 182 -TADFTDDASLVEHIGGQVQVVEGDPLAFKITNRLDLLLAQAVVRG 226
>gi|183985050|ref|YP_001853341.1| 4-diphosphocytidyl-2C-methyl-D-erythritol synthase IspD [Mycobacterium
marinum M]
gi|229830661|sp|B2HJ23.1|ISPD_MYCMM RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;
AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol
synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT
gi|183178376|gb|ACC43486.1| 4-diphosphocytidyl-2C-methyl-D-erythritol synthase IspD [Mycobacterium
marinum M]
Length=227
Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/224 (77%), Positives = 195/224 (88%), Gaps = 4/224 (1%)
Query 8 VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEAR 67
V AIVPAAGSG+RLA GVPKAFYQL+GQTL+ERAV GLL+SGVVDTVVVAVP DRTDEA+
Sbjct 8 VAAIVPAAGSGQRLAAGVPKAFYQLEGQTLVERAVRGLLESGVVDTVVVAVPPDRTDEAK 67
Query 68 QILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127
ILG A IVAGG++RT++V+ AL+ LS PEFVLVHDAARALTPPALV R+V+ LR
Sbjct 68 LILGREATIVAGGADRTESVSRALSALSAGVSPEFVLVHDAARALTPPALVVRLVDMLRA 127
Query 128 GYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPA 187
G+AAVVPVLPL+DTIKAVDANGVVLGTPERAGLRAVQTPQGF+T+LLLR+Y+ +
Sbjct 128 GHAAVVPVLPLTDTIKAVDANGVVLGTPERAGLRAVQTPQGFSTELLLRAYRHAGV---- 183
Query 188 AEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG 231
A +TDDASLVEH+GGQV VV GDPLAFKIT +LDLLLA A+VRG
Sbjct 184 AAFTDDASLVEHVGGQVHVVAGDPLAFKITNRLDLLLAHAVVRG 227
>gi|342862420|ref|ZP_08719060.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
colombiense CECT 3035]
gi|342130091|gb|EGT83425.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
colombiense CECT 3035]
Length=237
Score = 301 bits (770), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 166/231 (72%), Positives = 191/231 (83%), Gaps = 7/231 (3%)
Query 5 AGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTD 64
+G+VVA+VPAAGSGERLA G+PKAF +DG+TL++RAV GLL SG VD VVVAVPADR D
Sbjct 8 SGKVVAVVPAAGSGERLAAGIPKAFCSVDGRTLLQRAVAGLLASGAVDHVVVAVPADRID 67
Query 65 EARQILGH-----RAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVA 119
EA ++LG +A +VAGG++RT++V LAL L TA PEFVLVHDAARALTPPAL+
Sbjct 68 EANRVLGGDVGAGQATVVAGGADRTESVKLALAALP-TAVPEFVLVHDAARALTPPALIT 126
Query 120 RVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQ 179
RVVEALR G+ AVVP LPL DTIKAVDANGVVLGTPERAGLRAVQTPQGF T+LLLR+Y
Sbjct 127 RVVEALRTGHDAVVPALPLHDTIKAVDANGVVLGTPERAGLRAVQTPQGFATELLLRAYG 186
Query 180 RGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVR 230
+TDDASLVEH+GGQVQVVDGDPLAFKITT+LDLLLA+ +VR
Sbjct 187 AYRAGG-GGGFTDDASLVEHVGGQVQVVDGDPLAFKITTQLDLLLAETVVR 236
>gi|296166637|ref|ZP_06849064.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295898009|gb|EFG77588.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=228
Score = 294 bits (752), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 165/223 (74%), Positives = 193/223 (87%), Gaps = 6/223 (2%)
Query 8 VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEAR 67
VVA+VPAAGSGERL G+PKAF ++ G+TL++RAV+GLL+SGVVD VVVAVPA R DEA+
Sbjct 11 VVAVVPAAGSGERLGAGIPKAFCEVAGRTLLDRAVEGLLESGVVDRVVVAVPAARIDEAK 70
Query 68 QILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127
+ LG RA +VAGG++RT +V+LAL L+G +P FVLVHDAARALTPPALV RVV+ALR
Sbjct 71 RALGERATVVAGGADRTTSVSLALAALAG--DPGFVLVHDAARALTPPALVVRVVDALRS 128
Query 128 GYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPA 187
G+ AVVP LPL DTIKAVDANGVVLGTPERAGLRAVQTPQGF +LLLR+YQR
Sbjct 129 GHNAVVPALPLHDTIKAVDANGVVLGTPERAGLRAVQTPQGFARELLLRAYQRAG----T 184
Query 188 AEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVR 230
A++TDDASLVEH+GGQVQVVDGDPLAFKITT+LDLLLA+A+VR
Sbjct 185 ADFTDDASLVEHVGGQVQVVDGDPLAFKITTRLDLLLAEAVVR 227
>gi|118619337|ref|YP_907669.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
ulcerans Agy99]
gi|166215457|sp|A0PV29.1|ISPD_MYCUA RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;
AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol
synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT
gi|118571447|gb|ABL06198.1| 4-diphosphocytidyl-2C-methyl-D-erythritol synthase IspD [Mycobacterium
ulcerans Agy99]
Length=227
Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/224 (76%), Positives = 194/224 (87%), Gaps = 4/224 (1%)
Query 8 VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEAR 67
V AIVPAAGSG+RLA GVPKAFYQL+GQTL+ERAV GL +SGVVDTVVVAVP DRTDEA+
Sbjct 8 VAAIVPAAGSGQRLAAGVPKAFYQLEGQTLVERAVRGLFESGVVDTVVVAVPPDRTDEAK 67
Query 68 QILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127
ILG A IVAGG++RT++V+ AL+ LS PEFVLVHDAARALTPPALV R+V+ LR
Sbjct 68 LILGREATIVAGGADRTESVSRALSALSAGVSPEFVLVHDAARALTPPALVVRLVDMLRA 127
Query 128 GYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPA 187
G+AAVVPVLPL+DTIKAVDANGVVLGTPERAGLRAVQTPQGF+T+LLLR+Y+ +
Sbjct 128 GHAAVVPVLPLTDTIKAVDANGVVLGTPERAGLRAVQTPQGFSTELLLRAYRHAGV---- 183
Query 188 AEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG 231
+ +TDDASLVEH+GGQV VV GDPLAFKIT +LDLLLA A+VRG
Sbjct 184 SAFTDDASLVEHVGGQVHVVGGDPLAFKITNRLDLLLAHAVVRG 227
>gi|41406574|ref|NP_959410.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
avium subsp. paratuberculosis K-10]
gi|51701536|sp|Q743W5.1|ISPD_MYCPA RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;
AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol
synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT
gi|41394923|gb|AAS02793.1| hypothetical protein MAP_0476 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=235
Score = 287 bits (734), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 163/227 (72%), Positives = 190/227 (84%), Gaps = 5/227 (2%)
Query 4 EAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRT 63
+G V A+VPAAGSGERLA G+PKAF ++DG +++ RAV GLLDS VVD VVVAVPADR
Sbjct 13 SSGTVAAVVPAAGSGERLAAGIPKAFCEIDGASMLARAVAGLLDSKVVDHVVVAVPADRV 72
Query 64 DEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVE 123
DEA+++L +A +VAGG++RT +V LAL + G P FVLVHDAARALTPPAL+ARVV+
Sbjct 73 DEAKRLLPGQATVVAGGADRTASVRLALAAVPG--NPAFVLVHDAARALTPPALIARVVQ 130
Query 124 ALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSL 183
ALRDG+ AVVP LPL DT+KAVDANGVVLGTPER GLRAVQTPQGF TDLLLR+Y G+
Sbjct 131 ALRDGHRAVVPALPLHDTVKAVDANGVVLGTPERDGLRAVQTPQGFATDLLLRAYAAGAG 190
Query 184 DLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVR 230
A +TDDASLVEH+GGQVQVVDGDPLAFKITT+LDLLLA+ IVR
Sbjct 191 ---TAGFTDDASLVEHVGGQVQVVDGDPLAFKITTQLDLLLAETIVR 234
>gi|336458470|gb|EGO37443.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
avium subsp. paratuberculosis S397]
Length=229
Score = 285 bits (728), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 162/227 (72%), Positives = 189/227 (84%), Gaps = 5/227 (2%)
Query 4 EAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRT 63
+G V A+VPAAGSGERLA G+PKAF ++DG +++ RAV GLLDS VVD VVVAVPADR
Sbjct 7 SSGTVAAVVPAAGSGERLAAGIPKAFCEIDGASMLARAVAGLLDSKVVDHVVVAVPADRV 66
Query 64 DEARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVE 123
DEA+++L +A +VAGG++RT +V LAL + G P FVLVHDAARALTPPAL+ARVV+
Sbjct 67 DEAKRLLPGQATVVAGGADRTASVRLALAAVPG--NPAFVLVHDAARALTPPALIARVVQ 124
Query 124 ALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSL 183
ALRDG+ AVVP LPL DT+KAVDANGVVLGTPER GLRAVQTPQGF DLLLR+Y G+
Sbjct 125 ALRDGHRAVVPALPLHDTVKAVDANGVVLGTPERDGLRAVQTPQGFAADLLLRAYAAGAG 184
Query 184 DLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVR 230
A +TDDASLVEH+GGQVQVVDGDPLAFKITT+LDLLLA+ IVR
Sbjct 185 ---TAGFTDDASLVEHVGGQVQVVDGDPLAFKITTQLDLLLAETIVR 228
>gi|126437689|ref|YP_001073380.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
sp. JLS]
gi|126237489|gb|ABO00890.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
sp. JLS]
Length=221
Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/223 (66%), Positives = 180/223 (81%), Gaps = 7/223 (3%)
Query 9 VAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQ 68
VA+VPAAGSG+RLA G PKAF L G+ ++ERA+ GL DSGVVD++VVAVP RTDEA+
Sbjct 4 VAVVPAAGSGQRLAAGAPKAFVNLAGRPMLERAIAGLRDSGVVDSIVVAVPPSRTDEAKL 63
Query 69 ILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDG 128
+ G A+IVAGG++RT++V+LAL + + ++VLVHDAARALTPP+LVARVV AL G
Sbjct 64 VFGGEALIVAGGADRTESVSLALAAVG---DADYVLVHDAARALTPPSLVARVVRALEAG 120
Query 129 YAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAA 188
++AVVP LP++DTIKAVDANG VLGTPERAGLRA+QTPQGF D+L R+Y R
Sbjct 121 HSAVVPGLPVADTIKAVDANGAVLGTPERAGLRAIQTPQGFHIDVLRRAYARAG----DG 176
Query 189 EYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG 231
+TDDAS+VE GGQVQVVDGDPLAFKITT LDL+LA+AI+ G
Sbjct 177 GFTDDASMVEQAGGQVQVVDGDPLAFKITTPLDLVLAEAILAG 219
>gi|118464741|ref|YP_879851.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
avium 104]
gi|118166028|gb|ABK66925.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
avium 104]
Length=229
Score = 276 bits (705), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/215 (73%), Positives = 181/215 (85%), Gaps = 5/215 (2%)
Query 16 GSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGHRAM 75
GSGERLA G+PKAF ++DG +++ RAV GLLDS VVD VVVAVPADR DEA+++L +A
Sbjct 19 GSGERLAAGIPKAFCEIDGASMLARAVAGLLDSKVVDHVVVAVPADRVDEAKRLLAAQAT 78
Query 76 IVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPV 135
+VAGG++RT +V LAL + G P FVLVHDAARALTPPAL+ARVV+ALRDG+ AVVP
Sbjct 79 VVAGGADRTASVRLALAAVPGN--PAFVLVHDAARALTPPALIARVVQALRDGHRAVVPA 136
Query 136 LPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDAS 195
LPL DT+KAVDANGVVLGTPER GLRAVQTPQGF TDLLLR+Y G+ A +TDDAS
Sbjct 137 LPLHDTVKAVDANGVVLGTPERDGLRAVQTPQGFATDLLLRAYAAGAG---TAGFTDDAS 193
Query 196 LVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVR 230
LVEH+GGQVQVVDGDPLAFKITT+LDLLLA+ IVR
Sbjct 194 LVEHVGGQVQVVDGDPLAFKITTQLDLLLAETIVR 228
>gi|254822711|ref|ZP_05227712.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
intracellulare ATCC 13950]
Length=229
Score = 274 bits (701), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 163/226 (73%), Positives = 190/226 (85%), Gaps = 5/226 (2%)
Query 5 AGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTD 64
+G V+A+VPAAGSGERLA G+PKAF ++ G+TL+ERAV GLL+SGVVD VVVAVPADR D
Sbjct 8 SGNVIAVVPAAGSGERLAAGIPKAFCEIAGRTLLERAVAGLLESGVVDHVVVAVPADRID 67
Query 65 EARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEA 124
EA+++L RA +VAGG +RT +V+LAL L A +VLVHDAARALTPP L+ RVV+A
Sbjct 68 EAKRVLAGRATVVAGGPDRTRSVDLALAALPVAAA--YVLVHDAARALTPPTLITRVVDA 125
Query 125 LRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLD 184
LR G+ AVVP L L DTIKAVDANGVVLGTPER GLRAVQTPQGF TDLL R+Y+ G+
Sbjct 126 LRAGHDAVVPALRLHDTIKAVDANGVVLGTPERDGLRAVQTPQGFATDLLQRAYRAGAG- 184
Query 185 LPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVR 230
AA +TDDASLVEH+GGQVQVVDGDPLAFKITT+LDLLLA+AIVR
Sbjct 185 --AAGFTDDASLVEHVGGQVQVVDGDPLAFKITTQLDLLLAEAIVR 228
>gi|108801702|ref|YP_641899.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
sp. MCS]
gi|119870853|ref|YP_940805.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
sp. KMS]
gi|108772121|gb|ABG10843.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
sp. MCS]
gi|119696942|gb|ABL94015.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
sp. KMS]
Length=221
Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/223 (65%), Positives = 178/223 (80%), Gaps = 7/223 (3%)
Query 9 VAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQ 68
VA+VPAAGSG+RLA G PKAF L G+ ++ERA+ GL +SGVVD++VVAVP RTDEA+
Sbjct 4 VAVVPAAGSGQRLAAGAPKAFVNLAGRPMLERAIAGLRNSGVVDSIVVAVPPSRTDEAKL 63
Query 69 ILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDG 128
+ G A+IVAGG++RT++V AL + + ++VLVHDAARALTPP+LVARVV AL G
Sbjct 64 VFGGEALIVAGGADRTESVRAALAAVG---DADYVLVHDAARALTPPSLVARVVRALEAG 120
Query 129 YAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAA 188
++AVVP LP++DTIKAVDANG VLGTPERAGLRA+QTPQGF D+L R+Y R
Sbjct 121 HSAVVPGLPVADTIKAVDANGAVLGTPERAGLRAIQTPQGFHIDVLRRAYARAG----DG 176
Query 189 EYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG 231
+TDDAS+VE GGQVQVV+GDPLAFKITT LDL+LA+AI+ G
Sbjct 177 GFTDDASMVEQAGGQVQVVEGDPLAFKITTPLDLVLAEAILAG 219
>gi|333992514|ref|YP_004525128.1| 4-diphosphocytidyl-2C-methyl-D-erythritol synthase IspD [Mycobacterium
sp. JDM601]
gi|333488482|gb|AEF37874.1| 4-diphosphocytidyl-2C-methyl-D-erythritol synthase IspD [Mycobacterium
sp. JDM601]
Length=215
Score = 271 bits (692), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 152/220 (70%), Positives = 175/220 (80%), Gaps = 6/220 (2%)
Query 11 IVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQIL 70
+VPAAGSG RL G+PKAF+ L GQTL+ER V L +SGVVD VVVAVP DRTDEA+ IL
Sbjct 1 MVPAAGSGVRLGAGIPKAFFLLGGQTLVERTVAVLRESGVVDQVVVAVPPDRTDEAKLIL 60
Query 71 GHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYA 130
G +AM+VAGG NR D+V LAL + +P+FVLVHDAAR LTP LV RVVEAL G
Sbjct 61 GSKAMVVAGGENRVDSVRLAL---ASAGDPDFVLVHDAARPLTPVDLVVRVVEALHAGQR 117
Query 131 AVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEY 190
AVVP LP+ DTIKAVDANGVVLGTPERAGLRAVQTPQGF DLLLR+YQ+ ++
Sbjct 118 AVVPALPVPDTIKAVDANGVVLGTPERAGLRAVQTPQGFAADLLLRAYQQAGA---GTQF 174
Query 191 TDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVR 230
TDDAS+VEHIGGQVQ+VDGDPLAFKITT LD +LA+A++
Sbjct 175 TDDASMVEHIGGQVQIVDGDPLAFKITTALDAVLAEAVLN 214
>gi|15827085|ref|NP_301348.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
leprae TN]
gi|221229563|ref|YP_002502979.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
leprae Br4923]
gi|20138713|sp|Q9CCW6.1|ISPD_MYCLE RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;
AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol
synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT
gi|254806089|sp|B8ZUA7.1|ISPD_MYCLB RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;
AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol
synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT
gi|13092633|emb|CAC29829.1| putative 4-diphosphocytidyl-2C-methyl-D-erythritol synthase [Mycobacterium
leprae]
gi|219932670|emb|CAR70414.1| putative 4-diphosphocytidyl-2C-methyl-D-erythritol synthase [Mycobacterium
leprae Br4923]
Length=241
Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/223 (67%), Positives = 174/223 (79%), Gaps = 12/223 (5%)
Query 19 ERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQIL-------- 70
+RLA G+PKAF +LDG+TL+ERAV GLL+SGVVD VVVAVPADR + + +L
Sbjct 19 KRLAAGIPKAFCELDGRTLVERAVVGLLESGVVDHVVVAVPADRIAQTQWVLSQRLANSA 78
Query 71 GHRAMIVAGGSNRTDTVNLALTVL---SGTAEPEFVLVHDAARALTPPALVARVVEALRD 127
G A +VAGG++RT +V AL L S PEF+LVHDAARALTP L+ RVV+ALR
Sbjct 79 GQHATVVAGGADRTKSVCQALATLPAPSRVGAPEFILVHDAARALTPARLIVRVVDALRA 138
Query 128 GYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPA 187
G+ AVVP LPLSDTIKAVDANG+VLGTP R GLRAVQTPQGF T+LL +YQRG L A
Sbjct 139 GHTAVVPALPLSDTIKAVDANGMVLGTPARVGLRAVQTPQGFATELLWCAYQRGP-HLDA 197
Query 188 AEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVR 230
++TDDASLVEH+GGQVQVV GDPLAFKITT+LDLLLA+ I+R
Sbjct 198 VDFTDDASLVEHLGGQVQVVAGDPLAFKITTQLDLLLAKKILR 240
>gi|118469696|ref|YP_890298.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
smegmatis str. MC2 155]
gi|118170983|gb|ABK71879.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
smegmatis str. MC2 155]
Length=222
Score = 251 bits (641), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 139/222 (63%), Positives = 170/222 (77%), Gaps = 8/222 (3%)
Query 9 VAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQ 68
VA+VPAAGSGERL G PKAF L G L+E A+ GL SGV+D +V+AVP TDE++
Sbjct 4 VAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKL 63
Query 69 ILG-HRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127
+ G ++IV+GG +RT++V LAL + EFVLVHDAARALTPPAL+ARVV AL++
Sbjct 64 VFGGEDSVIVSGGVDRTESVALAL---EAAGDAEFVLVHDAARALTPPALIARVVAALKE 120
Query 128 GYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPA 187
G++AVVP L +DTIKAVDANG VLGTPERAGLRAVQTPQGF D+L R+Y R + A
Sbjct 121 GHSAVVPGLAPADTIKAVDANGAVLGTPERAGLRAVQTPQGFHADVLRRAYARAT----A 176
Query 188 AEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229
TDDASLVE +G VQ+VDGDPLAFKITT LDL+LA+A++
Sbjct 177 GGVTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVL 218
>gi|330689304|pdb|2XWL|A Chain A, Crystal Structure Of Ispd From Mycobacterium Smegmatis
In Complex With Ctp And Mg
gi|330689305|pdb|2XWL|B Chain B, Crystal Structure Of Ispd From Mycobacterium Smegmatis
In Complex With Ctp And Mg
gi|330689306|pdb|2XWM|A Chain A, Crystal Structure Of Ispd From Mycobacterium Smegmatis
In Complex With Cmp
gi|330689307|pdb|2XWM|B Chain B, Crystal Structure Of Ispd From Mycobacterium Smegmatis
In Complex With Cmp
Length=223
Score = 251 bits (640), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 139/222 (63%), Positives = 170/222 (77%), Gaps = 8/222 (3%)
Query 9 VAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQ 68
VA+VPAAGSGERL G PKAF L G L+E A+ GL SGV+D +V+AVP TDE++
Sbjct 4 VAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKL 63
Query 69 ILG-HRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127
+ G ++IV+GG +RT++V LAL + EFVLVHDAARALTPPAL+ARVV AL++
Sbjct 64 VFGGEDSVIVSGGVDRTESVALAL---EAAGDAEFVLVHDAARALTPPALIARVVAALKE 120
Query 128 GYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPA 187
G++AVVP L +DTIKAVDANG VLGTPERAGLRAVQTPQGF D+L R+Y R + A
Sbjct 121 GHSAVVPGLAPADTIKAVDANGAVLGTPERAGLRAVQTPQGFHADVLRRAYARAT----A 176
Query 188 AEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229
TDDASLVE +G VQ+VDGDPLAFKITT LDL+LA+A++
Sbjct 177 GGVTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVL 218
>gi|254773529|ref|ZP_05215045.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Mycobacterium
avium subsp. avium ATCC 25291]
Length=190
Score = 241 bits (615), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 141/194 (73%), Positives = 162/194 (84%), Gaps = 5/194 (2%)
Query 37 LIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGHRAMIVAGGSNRTDTVNLALTVLSG 96
++ RAV GLLDS VVD VVVAVPADR DEA+++L +A +VAGG++RT +V LAL + G
Sbjct 1 MLARAVAGLLDSKVVDHVVVAVPADRVDEAKRLLAAQATVVAGGADRTASVRLALAAVPG 60
Query 97 TAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPE 156
P FVLVHDAARALTPPAL+ARVV+AL DG+ AVVP LPL DT+KAVDANGVVLGTPE
Sbjct 61 --NPAFVLVHDAARALTPPALIARVVQALHDGHRAVVPALPLHDTVKAVDANGVVLGTPE 118
Query 157 RAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKI 216
R GLRAVQTPQGF TDLLLR+Y G+ A +TDDASLVEH+GGQVQVVDGDPLAFKI
Sbjct 119 RDGLRAVQTPQGFATDLLLRAYAAGAG---TAGFTDDASLVEHVGGQVQVVDGDPLAFKI 175
Query 217 TTKLDLLLAQAIVR 230
TT+LDLLLA+ IVR
Sbjct 176 TTQLDLLLAETIVR 189
>gi|111021432|ref|YP_704404.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Rhodococcus
jostii RHA1]
gi|123144643|sp|Q0S890.1|ISPD_RHOSR RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;
AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol
synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT
gi|110820962|gb|ABG96246.1| probable 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
[Rhodococcus jostii RHA1]
Length=226
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/226 (58%), Positives = 158/226 (70%), Gaps = 12/226 (5%)
Query 6 GEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDE 65
G VVA+VPAAG G RL PKAF L G T++ RAVDGLL SG VD VVV VP + +
Sbjct 6 GPVVALVPAAGQGVRLGENRPKAFVDLGGTTMLTRAVDGLLQSGAVDRVVVIVPEELVES 65
Query 66 ARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEAL 125
R +L +VAGGS RTD+V L V + ++VLVHDAARALTPP+L+ARVVE L
Sbjct 66 TRTLLPGEVTVVAGGSERTDSVRAGLAVAD---DADYVLVHDAARALTPPSLIARVVEEL 122
Query 126 RDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDL 185
R G AV+PVLP++DTIK VD G V GTPER+ LRAVQTPQGFT +LL R+Y
Sbjct 123 RCGRNAVIPVLPVTDTIKTVDVLGAVTGTPERSELRAVQTPQGFTAELLRRAYA------ 176
Query 186 PAAE--YTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229
AA+ TDDA LVE +G +V+ + G+P AFKITT LDL+LA+A+V
Sbjct 177 -AADGIATDDAGLVERLGERVRSIVGEPTAFKITTPLDLVLARALV 221
>gi|226363788|ref|YP_002781570.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Rhodococcus
opacus B4]
gi|254806090|sp|C1BAC2.1|ISPD_RHOOB RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;
AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol
synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT
gi|226242277|dbj|BAH52625.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Rhodococcus
opacus B4]
Length=226
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/226 (58%), Positives = 156/226 (70%), Gaps = 12/226 (5%)
Query 6 GEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDE 65
G VVA+VPAAG G RL PKAF L G T++ RAVDGLL SG VD VVV VP + +
Sbjct 6 GPVVALVPAAGQGVRLGENKPKAFVDLGGTTMLTRAVDGLLQSGAVDRVVVIVPEELVES 65
Query 66 ARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEAL 125
R +L +VAGGS RT +V L V + E+VLVHDAARALTPP+L+ARVV L
Sbjct 66 TRSLLPGHVTVVAGGSERTGSVRAGLAVAD---DAEYVLVHDAARALTPPSLIARVVAEL 122
Query 126 RDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDL 185
R G AV+PVLP++DTIK VD G V GTPER+ LRAVQTPQGFT +LL R+Y
Sbjct 123 RCGRRAVIPVLPVADTIKTVDVLGAVTGTPERSELRAVQTPQGFTAELLRRAYA------ 176
Query 186 PAAE--YTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229
AA+ TDDA LVE +G +V+ + G+P AFKITT LDL+LA+A+V
Sbjct 177 -AADGIATDDAGLVERLGERVRSIVGEPTAFKITTPLDLVLARALV 221
>gi|226304176|ref|YP_002764134.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Rhodococcus
erythropolis PR4]
gi|259493892|sp|C0ZPR7.1|ISPD_RHOE4 RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;
AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol
synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT
gi|226183291|dbj|BAH31395.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Rhodococcus
erythropolis PR4]
Length=232
Score = 215 bits (548), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/224 (56%), Positives = 158/224 (71%), Gaps = 10/224 (4%)
Query 8 VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEAR 67
VVA+VPAAG G RL +PKAF +L G T++ RAVDGL SG +D VVV VP + +
Sbjct 3 VVALVPAAGRGVRLGEKLPKAFVELGGCTMLARAVDGLRKSGAIDRVVVIVPPELVESVV 62
Query 68 QILGHRAMI--VAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEAL 125
LG + + V GG+ RTD+V L S + +FVLVHDAARALTPPAL+ARVV+AL
Sbjct 63 ADLGRASDVDVVGGGAERTDSVRAGL---SAAGDADFVLVHDAARALTPPALIARVVDAL 119
Query 126 RDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDL 185
R G +AV+PVLP++DTIK+VD G V GTP R+ LRAVQTPQGF+TD+L +Y G +
Sbjct 120 RAGSSAVIPVLPVTDTIKSVDVLGAVTGTPLRSELRAVQTPQGFSTDVLRSAYDAGDV-- 177
Query 186 PAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229
TDDA+LVE +G VQ + GD LAFKITT LDL+LA+A++
Sbjct 178 ---AATDDAALVERLGVSVQTIPGDALAFKITTPLDLVLARALL 218
>gi|229494289|ref|ZP_04388052.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Rhodococcus
erythropolis SK121]
gi|229318651|gb|EEN84509.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Rhodococcus
erythropolis SK121]
Length=232
Score = 215 bits (547), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/224 (56%), Positives = 157/224 (71%), Gaps = 10/224 (4%)
Query 8 VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEAR 67
VVA+VPAAG G RL +PKAF +L G T++ RAVDGL SG +D VVV VP + +
Sbjct 3 VVALVPAAGRGVRLGEKLPKAFVELGGCTMLARAVDGLRKSGAIDRVVVIVPPELVESVV 62
Query 68 QILGHRAMI--VAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEAL 125
LG A + V GG+ RTD+V L S + +FVLVHDAARALTPPAL+ARVV+ L
Sbjct 63 ADLGRAADVDVVGGGAERTDSVRAGL---SAAGDADFVLVHDAARALTPPALIARVVDTL 119
Query 126 RDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDL 185
R G +AV+PVLP++DTIK+VD G V GTP R+ LRAVQTPQGF+TD+L +Y G +
Sbjct 120 RAGSSAVIPVLPVTDTIKSVDVLGAVTGTPLRSELRAVQTPQGFSTDVLRSAYDAGDV-- 177
Query 186 PAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229
TDDA+LVE +G VQ + GD LAFKITT LDL+LA+A++
Sbjct 178 ---AATDDAALVERLGVSVQTIPGDALAFKITTPLDLVLARALL 218
>gi|54022400|ref|YP_116642.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Nocardia
farcinica IFM 10152]
gi|81680332|sp|Q5Z2R3.1|ISPD_NOCFA RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;
AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol
synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT
gi|54013908|dbj|BAD55278.1| putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
[Nocardia farcinica IFM 10152]
Length=230
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/226 (55%), Positives = 152/226 (68%), Gaps = 11/226 (4%)
Query 6 GEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDE 65
G VVA+VPAAG G RL PKAF + G ++ AVDGLL +GVVD ++V VPA+ +
Sbjct 8 GSVVALVPAAGRGVRLGEKSPKAFVPVGGTPMVRLAVDGLLAAGVVDRIIVMVPAEWVES 67
Query 66 ARQIL--GHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVE 123
A +L +V GG+ RTD+V L + + + LVHDAARALTPPAL+ R+V
Sbjct 68 AVALLPPSEVVRVVVGGAERTDSVRAGL---AAAPDAGYFLVHDAARALTPPALIGRIVG 124
Query 124 ALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSL 183
LR G AVVP LP+ DT+K+VDA GVV GTP+RA LRAVQTPQGFT DLL +Y +
Sbjct 125 ELRAGRRAVVPALPVVDTVKSVDAAGVVTGTPDRAALRAVQTPQGFTADLLRAAY---AA 181
Query 184 DLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229
D+PA TDDA LVE +G V V GDPLAFKITT LDL LA+ ++
Sbjct 182 DVPA---TDDAGLVERLGEPVHTVAGDPLAFKITTPLDLRLAETLL 224
>gi|296138336|ref|YP_003645579.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Tsukamurella
paurometabola DSM 20162]
gi|296026470|gb|ADG77240.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Tsukamurella
paurometabola DSM 20162]
Length=220
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/221 (56%), Positives = 145/221 (66%), Gaps = 8/221 (3%)
Query 8 VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEAR 67
VVA+VPAAG G RL + PKAF L G++L+ERAVDGL SG VD VVV VPAD D+AR
Sbjct 3 VVALVPAAGQGTRLGLNRPKAFVTLQGRSLLERAVDGLFASGAVDEVVVMVPADLVDDAR 62
Query 68 QILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127
++ RA +V GG+ RTD+V L VLVHDAAR LTP ++ RVV ALR+
Sbjct 63 ALV-PRARVVVGGAERTDSVRAGLAAAGDADL---VLVHDAARPLTPGPMIHRVVAALRE 118
Query 128 GYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPA 187
G +AV+PVLP++DTIK VDA G V T +RA LRAVQTPQGFT L +Y P
Sbjct 119 GASAVIPVLPVADTIKRVDAGGAVAATVDRADLRAVQTPQGFTAQALRAAYDAA----PN 174
Query 188 AEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAI 228
TDDA LVE GG V V GDPLA KITT DL +A+ +
Sbjct 175 ESATDDAGLVERAGGTVATVTGDPLAMKITTAFDLRIAEVL 215
>gi|312138098|ref|YP_004005434.1| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase [Rhodococcus
equi 103S]
gi|311887437|emb|CBH46749.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Rhodococcus
equi 103S]
Length=227
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 125/224 (56%), Positives = 152/224 (68%), Gaps = 8/224 (3%)
Query 6 GEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDE 65
G VVA+VPAAG G RL VPKAF +L G++++ RAVDGLL SGVVDTVVV VP + +
Sbjct 6 GPVVALVPAAGRGVRLGEPVPKAFVELGGRSMLRRAVDGLLGSGVVDTVVVIVPDELVEA 65
Query 66 ARQILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEAL 125
AR L ++V GG R D+V L + E VLVHDAARALTPP+L+ARVV L
Sbjct 66 ARADLPAGVLVVVGGEERADSVRAGL---AAAPEAGLVLVHDAARALTPPSLIARVVAEL 122
Query 126 RDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDL 185
+ G AVVPVLP+SDTIK VD G V GTP R+ LRAVQTPQGF DLL R+Y+ + D
Sbjct 123 QAGRTAVVPVLPVSDTIKTVDVLGTVTGTPPRSELRAVQTPQGFDADLLRRAYEDVNGD- 181
Query 186 PAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229
TDDA LVE +G V+ + G+P AFKITT DL LA+ ++
Sbjct 182 ----ATDDAGLVERLGEPVRTIVGEPEAFKITTPWDLALARVLL 221
>gi|326383078|ref|ZP_08204767.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Gordonia
neofelifaecis NRRL B-59395]
gi|326198214|gb|EGD55399.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Gordonia
neofelifaecis NRRL B-59395]
Length=207
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/211 (54%), Positives = 141/211 (67%), Gaps = 10/211 (4%)
Query 18 GERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGHRAMIV 77
G RL VPKAF ++DG TL+E + D SGV+D +VV PA+ ++ A Q L A++V
Sbjct 2 GTRLGEAVPKAFVEIDGVTLLELSADAARRSGVIDRIVVVAPAELSERA-QALVPDAVVV 60
Query 78 AGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLP 137
AGG+ R+D+V L + + E +LVHDAARALTPP L A VV ALRDG AVVP +P
Sbjct 61 AGGAERSDSVRAGL---AAAGDAELILVHDAARALTPPELFATVVAALRDGARAVVPGVP 117
Query 138 LSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLV 197
++DT+K VD G+VL TP+RA LRAVQTPQGF D +LR R S D TDDA LV
Sbjct 118 VADTLKRVDPAGIVLDTPDRAELRAVQTPQGFRAD-VLREAHRSSGD-----ATDDAGLV 171
Query 198 EHIGGQVQVVDGDPLAFKITTKLDLLLAQAI 228
E +G V+VV GD +AFK+TT DL LA+ I
Sbjct 172 EALGIPVRVVPGDAMAFKVTTPFDLALARMI 202
>gi|296118941|ref|ZP_06837514.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Corynebacterium
ammoniagenes DSM 20306]
gi|295968039|gb|EFG81291.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Corynebacterium
ammoniagenes DSM 20306]
Length=234
Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/235 (50%), Positives = 146/235 (63%), Gaps = 17/235 (7%)
Query 5 AGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTD 64
A V A+V AAG G RL +PKAF +L GQTL+ER+V +LDS VD + V V ADR D
Sbjct 2 ARRVSALVAAAGQGTRLGAALPKAFVELQGQTLVERSVRAMLDSQAVDDIAVVVAADRED 61
Query 65 EARQI-----LGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVA 119
AR I L + V G R D+V L ++ + VLVHDAARALTPPA++A
Sbjct 62 HARSIFEAAGLAAQVRFVHGSQERADSVWAGLQSIAD--DDGIVLVHDAARALTPPAMIA 119
Query 120 RVVEALRDGYAAVVPVLPLSDTIKAVDANGV-VLGTPERAGLRAVQTPQGFTTDLLLRSY 178
RVV+A+R G A +PVLP++DTIK + NG V+ TP+RA LRAVQTPQ F L +
Sbjct 120 RVVDAVRAGAPAAIPVLPVADTIKRI--NGTQVIDTPDRATLRAVQTPQAFDLATLRAAN 177
Query 179 QRGSLDLPAAEY----TDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229
+R + E TDDASL+E G V VDGD +AFKITT +DL LA A++
Sbjct 178 ERY---FASQERTFIATDDASLMEWFGQSVVTVDGDAMAFKITTPIDLTLANALL 229
>gi|169627672|ref|YP_001701321.1| putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
[Mycobacterium abscessus ATCC 19977]
gi|169239639|emb|CAM60667.1| Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
[Mycobacterium abscessus]
Length=210
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/210 (53%), Positives = 147/210 (70%), Gaps = 8/210 (3%)
Query 20 RLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGHRAMIVAG 79
RL PKAF + G+T+++R VDGLL SG VD VVV V AD+ + A ++G A +V G
Sbjct 2 RLGANTPKAFVSVGGRTMLQRCVDGLLASGAVDEVVVVVGADQLERAAALVGSGATVVQG 61
Query 80 GSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLS 139
G+ RTD+V L + +++LVHDAAR LTPP ++AR+V LR G AV+P + ++
Sbjct 62 GAERTDSVRAGLAAVDAA---DWILVHDAARPLTPPDMIARIVAELRTGRGAVIPAVAVA 118
Query 140 DTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEH 199
DTIK++D +G V+GTP+RAGLRAVQTPQGF D+L R+Y D+ TDDA+LVE
Sbjct 119 DTIKSIDVHGDVIGTPDRAGLRAVQTPQGFAADVLRRAYAAAG-DIA----TDDAALVEQ 173
Query 200 IGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229
IG +V VV+GD LAFKITT LD+ LA+AI+
Sbjct 174 IGERVHVVEGDRLAFKITTTLDMTLAEAIL 203
>gi|134097052|ref|YP_001102713.1| 4-diphosphocytidyl-2C-methyl-D-erythritol synthase [Saccharopolyspora
erythraea NRRL 2338]
gi|291007007|ref|ZP_06564980.1| 4-diphosphocytidyl-2C-methyl-D-erythritol synthase [Saccharopolyspora
erythraea NRRL 2338]
gi|229830799|sp|A4F6W3.1|ISPD_SACEN RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;
AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol
synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT
gi|133909675|emb|CAL99787.1| 4-diphosphocytidyl-2C-methyl-D-erythritol synthase [Saccharopolyspora
erythraea NRRL 2338]
Length=224
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/226 (52%), Positives = 143/226 (64%), Gaps = 9/226 (3%)
Query 8 VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEAR 67
VVA+VPAAG G RL GVPKA + G++L+ RAV GL DSG V VVVA PAD
Sbjct 3 VVALVPAAGRGVRLGAGVPKALVPVAGESLLSRAVRGLHDSGRVRHVVVAAPADEVPAVE 62
Query 68 QILGH-RAMI--VAGGSNRTDTVNLALTVLSGTA-EPEFVLVHDAARALTPPALVARVVE 123
L R+ + V GG+ RTD+V LAL + VLVHDAARA TPP++V VV
Sbjct 63 AELASLRSFVHVVPGGAERTDSVRLALAEAERVVPDARVVLVHDAARAFTPPSVVRDVVR 122
Query 124 ALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSL 183
A+ +G AVVPVLP++DTIK VD G V T +R+ LR VQTPQGF D+L ++Y
Sbjct 123 AVEEGAPAVVPVLPVADTIKQVDEAGDVETTVDRSRLRTVQTPQGFAIDVLRQAYAAAG- 181
Query 184 DLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229
D+ TDDA LVE IGG+V V G P A KITT DL +A+A++
Sbjct 182 DI----ATDDAGLVERIGGKVSTVPGHPHALKITTAFDLAIAEAVL 223
>gi|337291591|ref|YP_004630612.1| 4-diphosphocytidyl-2C-methyl-D-erythritolsynthase [Corynebacterium
ulcerans BR-AD22]
gi|334697563|gb|AEG82360.1| 4-diphosphocytidyl-2C-methyl-D-erythritolsynthase [Corynebacterium
ulcerans 809]
gi|334699897|gb|AEG84693.1| 4-diphosphocytidyl-2C-methyl-D-erythritolsynthase [Corynebacterium
ulcerans BR-AD22]
Length=245
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/230 (47%), Positives = 140/230 (61%), Gaps = 12/230 (5%)
Query 8 VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEAR 67
VVAIV AAG G+RL +PKA+ L G+ L+ R+V +L SG+VD V+V + + D A
Sbjct 5 VVAIVAAAGKGKRLGAELPKAYVPLRGKALLVRSVQAMLTSGIVDEVIVIISPEMQDYAE 64
Query 68 QILGHRAMI---------VAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALV 118
+ILG ++ V GG R D+V L L + VL+HD+ARALTPP ++
Sbjct 65 RILGQAGLLPSPEIPVRLVHGGEERADSVWCGLQSLPD--KDAVVLIHDSARALTPPGMI 122
Query 119 ARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSY 178
ARV A+ +G AV+PVLP++DTIK VD VL TP R+ LRAVQTPQGF L +
Sbjct 123 ARVARAVLEGAEAVIPVLPVADTIKEVDGT-TVLRTPVRSSLRAVQTPQGFDLAQLRAAN 181
Query 179 QRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAI 228
P TDDASL+E G VQ V GDP+AFK+TT LD LA+A+
Sbjct 182 LAYFEQQPEFIATDDASLMEWFGVNVQCVQGDPMAFKVTTPLDYALAKAV 231
>gi|325674998|ref|ZP_08154685.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Rhodococcus
equi ATCC 33707]
gi|325554584|gb|EGD24259.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Rhodococcus
equi ATCC 33707]
Length=203
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/205 (55%), Positives = 139/205 (68%), Gaps = 8/205 (3%)
Query 25 VPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGHRAMIVAGGSNRT 84
+PKAF +L G++++ RAVDGLL SGVVDTVVV VP + + AR L ++V GG R
Sbjct 1 MPKAFVELGGRSMLRRAVDGLLGSGVVDTVVVIVPDELVEAARADLPAGVLVVVGGEERA 60
Query 85 DTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKA 144
D+V L + E VLVHDAARALTPP+L+ARVV L+ G AVVPVLP+SDTIK
Sbjct 61 DSVRAGL---AAAPEAGLVLVHDAARALTPPSLIARVVAELQAGRTAVVPVLPVSDTIKT 117
Query 145 VDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQV 204
VD G V GTP R+ LRAVQTPQGF DLL R+Y+ + D TDDA LVE +G V
Sbjct 118 VDVLGTVTGTPPRSELRAVQTPQGFDADLLRRAYEDVNGD-----ATDDAGLVERLGEPV 172
Query 205 QVVDGDPLAFKITTKLDLLLAQAIV 229
+ + G+P AFKITT DL LA+ ++
Sbjct 173 RTIVGEPEAFKITTPWDLALARVLL 197
>gi|293194139|ref|ZP_06609940.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Actinomyces
odontolyticus F0309]
gi|292819781|gb|EFF78792.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Actinomyces
odontolyticus F0309]
Length=238
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/229 (49%), Positives = 144/229 (63%), Gaps = 8/229 (3%)
Query 7 EVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEA 66
E A++ AAGSG RL PKA +L G+ L+ A GL +G V +VV PA +E
Sbjct 6 ESCAVLTAAGSGSRLCCEGPKALVELSGRPLVWWAARGL-RAGGVGAIVVTAPASSIEEF 64
Query 67 RQILGH-RAMIVAGGSNRT--DTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVE 123
R L + V GS+R+ ++V L L L VLVHDAAR LTPP + ARV++
Sbjct 65 RSALSDIDDLTVVAGSDRSRQESVALGLAALGRCEADTVVLVHDAARPLTPPQVTARVID 124
Query 124 ALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSL 183
A+R G AV+PVLP++DT+K VDA+GVV+GTP R+ + AVQTPQGF D+L+R+++ G+
Sbjct 125 AVRGGAGAVIPVLPVTDTLKTVDASGVVVGTPRRSEMVAVQTPQGFRWDVLIRAHEEGA- 183
Query 184 DLPAAE---YTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229
L A E TDDA LVE IGG V V GD + K+T LDL LAQ +V
Sbjct 184 SLGADEAWAATDDAGLVEAIGGTVHTVAGDERSMKVTRPLDLALAQILV 232
>gi|19553857|ref|NP_601859.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Corynebacterium
glutamicum ATCC 13032]
gi|62391498|ref|YP_226900.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Corynebacterium
glutamicum ATCC 13032]
gi|24211785|sp|Q8NMB8.1|ISPD_CORGL RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;
AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol
synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT
gi|21325432|dbj|BAC00054.1| 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Corynebacterium
glutamicum ATCC 13032]
gi|41326840|emb|CAF20684.1| 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANS [Corynebacterium
glutamicum ATCC 13032]
Length=256
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/235 (47%), Positives = 146/235 (63%), Gaps = 14/235 (5%)
Query 8 VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEAR 67
V+A++ AAG G RL +PKAF L +TL+ER++ +L S VD +++ V D AR
Sbjct 8 VIALLAAAGRGTRLGGPIPKAFVTLRERTLLERSLQAMLTSESVDEIIILVSPDMETYAR 67
Query 68 QIL----------GHRAMIVAGGSNRTDTVNLALTVLS-GTAEPE-FVLVHDAARALTPP 115
+L G R +V GG R D+V L +S A P+ VL+HD+ARALTPP
Sbjct 68 DLLRKRGLLNDPEGVRVRLVHGGGERADSVWAGLQAISLDDATPDAIVLIHDSARALTPP 127
Query 116 ALVARVVEALRDGYAAVVPVLPLSDTIKAVDAN-GVVLGTPERAGLRAVQTPQGFTTDLL 174
++ARVV + +G AV+PVLP+SDTIK V + GVV+ TP RA LRAVQTPQGF L
Sbjct 128 GMIARVVRKVHEGATAVIPVLPVSDTIKRVSPDGGVVVDTPNRAELRAVQTPQGFLLSEL 187
Query 175 LRSYQRGSLDL-PAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAI 228
+ + ++ D P TDDASL+E G V V GDP+AFK+TT +D++LAQ I
Sbjct 188 VAANEKFFADPNPGFIPTDDASLMEWYGADVVCVQGDPMAFKVTTPIDMMLAQRI 242
>gi|25029077|ref|NP_739131.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Corynebacterium
efficiens YS-314]
gi|259505931|ref|ZP_05748833.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (4-diphosphocytidyl-2C-methyl-D-erythritol
synthase) [Corynebacterium
efficiens YS-314]
gi|33516916|sp|Q8FMI3.1|ISPD_COREF RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;
AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol
synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT
gi|23494364|dbj|BAC19331.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259166412|gb|EEW50966.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (4-diphosphocytidyl-2C-methyl-D-erythritol
synthase) [Corynebacterium
efficiens YS-314]
Length=248
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/233 (46%), Positives = 144/233 (62%), Gaps = 16/233 (6%)
Query 8 VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEAR 67
VVA++ AAG G RL +PKAF L G++L+ER++ +L S VVD V++ V D D AR
Sbjct 6 VVALLAAAGRGTRLGGPIPKAFVTLRGRSLVERSLRAMLTSEVVDEVIILVSPDMEDYAR 65
Query 68 QILGHRAMI----------VAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPAL 117
++L R ++ V GG R D+V L + + VL+HD+ARALTPP +
Sbjct 66 ELLTRRGLLNDPEGVRVRLVHGGGERADSVWAGLQAID--HDDAIVLIHDSARALTPPGM 123
Query 118 VARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRS 177
+ARV + DG AV+PV+P++DTIK VD + VV TP RA LRAVQTPQGF LR+
Sbjct 124 IARVARMVADGAPAVIPVVPVADTIKRVDGSTVV-DTPNRADLRAVQTPQGFLLS-RLRA 181
Query 178 YQRGSLDLPAAEY--TDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAI 228
P + TDDASL+E G +V V GDP+AFK+TT +D++LAQ I
Sbjct 182 ANEKFFATPDPGFIPTDDASLMEWYGVEVTCVQGDPMAFKVTTPIDMMLAQRI 234
>gi|227834037|ref|YP_002835744.1| 4-diphosphocytidyl-2-C-methyl-D-erythritolsynthase [Corynebacterium
aurimucosum ATCC 700975]
gi|262183477|ref|ZP_06042898.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Corynebacterium
aurimucosum ATCC 700975]
gi|227455053|gb|ACP33806.1| 4-diphosphocytidyl-2-C-methyl-D-erythritolsynthase [Corynebacterium
aurimucosum ATCC 700975]
Length=253
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/235 (47%), Positives = 144/235 (62%), Gaps = 16/235 (6%)
Query 3 REAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADR 62
R V+A+V AAG G RL VPKA+ +L G+TL+ER+V ++ S VD ++V V
Sbjct 12 RSTARVIALVAAAGQGTRLGAEVPKAYVELRGRTLLERSVRAMITSEFVDEIIVLVSPSM 71
Query 63 TDEARQILGH-----RAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPAL 117
A IL IV GG R D+V L + E VL+HDAARALTPP +
Sbjct 72 EGYAASILNRIDSDVPVRIVHGGDERADSVWAGLQAIPD--EDAVVLIHDAARALTPPGM 129
Query 118 VARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRS 177
+ARV + + DG AV+PVLP++DTIK V+ VL TP+R+ LRAVQTPQGF L +
Sbjct 130 IARVAKRVLDGATAVIPVLPVADTIKEVEGQ-TVLSTPDRSRLRAVQTPQGFN----LAA 184
Query 178 YQRGSLDLPAAE----YTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAI 228
+R +LD A + TDDASL+E G +V+ V GD AFKITT +DL+LA+A+
Sbjct 185 LRRANLDYWAQDPDFVATDDASLMEWHGERVETVQGDTFAFKITTPIDLVLAKAV 239
>gi|227505966|ref|ZP_03936015.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Corynebacterium
striatum ATCC 6940]
gi|227197488|gb|EEI77536.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Corynebacterium
striatum ATCC 6940]
Length=238
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/229 (50%), Positives = 140/229 (62%), Gaps = 12/229 (5%)
Query 8 VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEAR 67
VVA++ AAG G RL VPKA+ +L G+TL+ER+V + SGVV VV V D AR
Sbjct 13 VVALIAAAGIGTRLGAEVPKAYVELQGRTLLERSVAAMAHSGVVKRAVVTVSPVMEDTAR 72
Query 68 QILGHRAM---IVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEA 124
+L + V GG R D+V L + E VL+HDAARALTPPA++ARV +
Sbjct 73 ALLADAPLPITFVHGGGERADSVWAGLQAID--EEDAVVLIHDAARALTPPAMIARVAQT 130
Query 125 LRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLL---RSYQRG 181
+ DG AV+PVLP+SDTIK VDA VV TP+R+ LRAVQTPQGF L Y G
Sbjct 131 VLDGAPAVIPVLPVSDTIKIVDAERVV-STPDRSSLRAVQTPQGFDLATLRGANEKYFSG 189
Query 182 SLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVR 230
+ A TDDASL+E G V V GD LA KITT +DL LA AI++
Sbjct 190 QQEFIA---TDDASLMEWFGVPVATVPGDQLALKITTPMDLTLATAILK 235
>gi|145296657|ref|YP_001139478.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Corynebacterium
glutamicum R]
gi|166215447|sp|A4QH60.1|ISPD_CORGB RecName: Full=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;
AltName: Full=4-diphosphocytidyl-2C-methyl-D-erythritol
synthase; AltName: Full=MEP cytidylyltransferase; Short=MCT
gi|140846577|dbj|BAF55576.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344046275|gb|EGV41941.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Corynebacterium
glutamicum S9114]
Length=256
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/235 (46%), Positives = 146/235 (63%), Gaps = 14/235 (5%)
Query 8 VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEAR 67
V+A++ AAG G RL +PKAF L +TL+ER++ +L S VD +++ V D AR
Sbjct 8 VIALLAAAGRGTRLGGPIPKAFVTLRERTLLERSLQAMLTSESVDEIIILVSPDMETYAR 67
Query 68 QILGHRAMI----------VAGGSNRTDTVNLAL-TVLSGTAEPE-FVLVHDAARALTPP 115
+L R ++ V GG R D+V L +L A P+ VL+HD+ARALTPP
Sbjct 68 DLLRKRGLLNDPEGVRIRLVHGGGERADSVWAGLQAILLDDATPDAIVLIHDSARALTPP 127
Query 116 ALVARVVEALRDGYAAVVPVLPLSDTIKAVDAN-GVVLGTPERAGLRAVQTPQGFTTDLL 174
++ARVV + +G AV+PVLP+SDTIK V + GVV+ TP RA LRAVQTPQGF L
Sbjct 128 GMIARVVRKVHEGATAVIPVLPVSDTIKRVSLDAGVVVDTPNRAELRAVQTPQGFLLSEL 187
Query 175 LRSYQRGSLDL-PAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAI 228
+ + ++ D P TDDASL+E G V V GDP+AFK+TT +D++LAQ I
Sbjct 188 VAANKKFFADPNPGFIPTDDASLMEWYGADVVCVQGDPMAFKVTTPIDMMLAQRI 242
>gi|288923579|ref|ZP_06417691.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Frankia
sp. EUN1f]
gi|288345078|gb|EFC79495.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Frankia
sp. EUN1f]
Length=229
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 140/220 (64%), Gaps = 7/220 (3%)
Query 10 AIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQI 69
A+VPAAG GERL G PKA L G+ ++ RAV+ LL S +V VVVA P D Q+
Sbjct 7 AVVPAAGRGERLGGGTPKALRPLAGRPMLLRAVETLLSSTLVSQVVVAAPPTLVDVVGQL 66
Query 70 LGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGY 129
LG +V GG+ R D+V +AL L + VLVHDAAR LTP LV V + DG+
Sbjct 67 LGSGVRVVPGGAERVDSVRVALDALDD--DIGVVLVHDAARPLTPAKLVDAVATTVLDGH 124
Query 130 AAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAE 189
AV+PVLP++DTIK +DA+G V+ TP R GLRAVQTPQGF D+L +Y + DLP
Sbjct 125 PAVIPVLPVADTIKEIDADGRVVRTPRRDGLRAVQTPQGFRRDILRAAY--ANRDLP--- 179
Query 190 YTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229
TDDA LVE +G V + G AFK+T DL+LA+A++
Sbjct 180 VTDDAGLVEALGVPVTTIPGAEEAFKVTRPADLVLAEALL 219
>gi|154508492|ref|ZP_02044134.1| hypothetical protein ACTODO_00993 [Actinomyces odontolyticus
ATCC 17982]
gi|153798126|gb|EDN80546.1| hypothetical protein ACTODO_00993 [Actinomyces odontolyticus
ATCC 17982]
Length=238
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/229 (48%), Positives = 143/229 (63%), Gaps = 8/229 (3%)
Query 7 EVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEA 66
E A++ AAGSG RL PKA +L G+ L+ A GL +G V +VV PA +E
Sbjct 6 ESCAVLTAAGSGSRLCCEGPKALVELSGRPLVWWAARGL-RAGGVGAIVVTAPASSIEEF 64
Query 67 RQILGH-RAMIVAGGSNRT--DTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVE 123
R L + V GS+R+ ++V L L L VLVHDAAR LTPP + RV++
Sbjct 65 RSALSDIDDLTVVAGSDRSRQESVALGLAALGRCEADTVVLVHDAARPLTPPQVTERVID 124
Query 124 ALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSL 183
A+ G AV+PVLP++DT+K VDA+GVV+GTP R+ + AVQTPQGF D+L+R+++ G+
Sbjct 125 AVAGGAGAVIPVLPVTDTLKTVDASGVVVGTPRRSDMVAVQTPQGFRWDVLIRAHEEGA- 183
Query 184 DLPAAE---YTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229
L A E TDDA LVE IGG VQ V GD + K+T LDL LAQ +V
Sbjct 184 SLGADEARAATDDAGLVEAIGGSVQTVAGDERSMKVTRPLDLALAQILV 232
>gi|331699818|ref|YP_004336057.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Pseudonocardia
dioxanivorans CB1190]
gi|326954507|gb|AEA28204.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Pseudonocardia
dioxanivorans CB1190]
Length=251
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/243 (54%), Positives = 159/243 (66%), Gaps = 21/243 (8%)
Query 7 EVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEA 66
VVA+VPAAGSG+RL G PKAF + G ++ RAVDGLL SG VD VVVA PA+ + A
Sbjct 2 SVVAVVPAAGSGQRLGAGEPKAFVTVGGTPMLVRAVDGLLRSGAVDHVVVAAPAELVESA 61
Query 67 RQIL-GHRAMIVAGGSNRTDTVNLALTVL---------------SGTAE---PEFVLVHD 107
R++L G +VAGG++RT +V AL L SGT PE VLVHD
Sbjct 62 RRLLPGRPVTVVAGGADRTASVLCALGALHDGGDPNGVHTGDERSGTRRGDAPEVVLVHD 121
Query 108 AARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQ 167
AAR LTPPALVA VV A+R G+ AVVPVLP++DT+K VDA G V+ T +R LRAVQTPQ
Sbjct 122 AARPLTPPALVAAVVAAVRAGHRAVVPVLPVADTVKRVDAVGRVVETVDRTVLRAVQTPQ 181
Query 168 GFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQA 227
GFT +LLLR+++ + A TDDA LVE IG V V GD AFKITT D +A+
Sbjct 182 GFTPELLLRAHRAAAAR--GAAATDDAGLVEAIGEPVHTVPGDATAFKITTAWDHRIAEN 239
Query 228 IVR 230
+++
Sbjct 240 LLQ 242
>gi|158312227|ref|YP_001504735.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Frankia
sp. EAN1pec]
gi|158107632|gb|ABW09829.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Frankia
sp. EAN1pec]
Length=229
Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 139/220 (64%), Gaps = 7/220 (3%)
Query 10 AIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQI 69
A+VPAAG GERL G PKA L G+ ++ RAV+ LL S +V VVVA P + QI
Sbjct 7 ALVPAAGRGERLGGGTPKALRPLGGRPMLLRAVETLLSSTLVSQVVVAAPPTLVEVVGQI 66
Query 70 LGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGY 129
LG R +V GG+ R D+V AL L + VLVHDAAR LTP LV V + DG+
Sbjct 67 LGPRVRVVPGGAERVDSVRAALEALDD--DIGVVLVHDAARPLTPAKLVDAVATTVLDGH 124
Query 130 AAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAE 189
AV+PVLP++DT+K VDA+G V+ TP R LRAVQTPQGF D+L +Y + DLP
Sbjct 125 PAVIPVLPVTDTVKEVDADGRVVRTPPRDVLRAVQTPQGFRRDILHTAY--ANRDLP--- 179
Query 190 YTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229
TDDA LVE +G V + G AFK+T DL+LA+A++
Sbjct 180 VTDDAGLVEALGVPVTTIPGAEEAFKVTRPADLVLAEALL 219
>gi|256374518|ref|YP_003098178.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Actinosynnema
mirum DSM 43827]
gi|255918821|gb|ACU34332.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Actinosynnema
mirum DSM 43827]
Length=230
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/231 (47%), Positives = 143/231 (62%), Gaps = 13/231 (5%)
Query 8 VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEAR 67
VVA+VPAAG GERL G+PKA + G L+ RA+ GL +SG V VVVA P D+ R
Sbjct 3 VVALVPAAGRGERLGFGMPKALVPVGGVPLLVRAIRGLFESGRVRHVVVAAPPSDVDQVR 62
Query 68 QIL------GHRAMIVAGGSNRTDTVNLALT-VLSGTAEPEFVLVHDAARALTPPALVAR 120
+ G ++AGG+ R+D+V LAL L+ + VLVHDAARA TPP +V
Sbjct 63 TVTAPLAPAGGAVHVLAGGAERSDSVRLALEHALAEVPDVRVVLVHDAARAFTPPTVVRD 122
Query 121 VVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQR 180
VV+A+ G+ AV+PVLP++DT+K VD GVV+ TP+R+ LR VQTPQGF L +++
Sbjct 123 VVDAVLAGHPAVIPVLPVADTVKRVDTKGVVVDTPDRSLLRVVQTPQGFDAATLRAAHES 182
Query 181 GSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG 231
G TDDA LVE +G V V G A K+TT DL +A+A++ G
Sbjct 183 G------LHATDDAGLVERLGVPVVTVTGHQDAMKVTTPFDLAVAEALLVG 227
>gi|227540999|ref|ZP_03971048.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227183259|gb|EEI64231.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Corynebacterium
glucuronolyticum ATCC 51866]
Length=240
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/222 (47%), Positives = 140/222 (64%), Gaps = 6/222 (2%)
Query 8 VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEAR 67
+ A+V AAG G RL +PKA+ L G+TL+ER+V + + V D ++V + + D AR
Sbjct 5 IYALVAAAGKGTRLGADLPKAYVSLRGRTLLERSVAAIETAEVADEILVIIHPEMEDYAR 64
Query 68 QIL-GHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALR 126
++L GH V GG+ R D+V L + VL+HDAARALTPP L+ARV A+
Sbjct 65 RVLDGHDITFVHGGAERFDSVAQGLKAIPDANG--VVLIHDAARALTPPGLIARVARAVL 122
Query 127 DGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLP 186
+G AV+P +P++DTIK V + V+ TP+R+ LRAVQTPQGF LR+ P
Sbjct 123 EGSEAVIPTIPVADTIKVVKDHAVI-DTPDRSTLRAVQTPQGFNL-AALRAANEEFFAHP 180
Query 187 AAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAI 228
+ TDDAS++EH G V V GDP+AFKITT +DLLLA+ I
Sbjct 181 -FDATDDASIMEHAGHTVTTVTGDPMAFKITTPIDLLLAEHI 221
>gi|227489405|ref|ZP_03919721.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227090583|gb|EEI25895.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Corynebacterium
glucuronolyticum ATCC 51867]
Length=240
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/222 (47%), Positives = 140/222 (64%), Gaps = 6/222 (2%)
Query 8 VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEAR 67
+ A+V AAG G RL +PKA+ L G+TL+ER+V + + V D ++V + + D AR
Sbjct 5 IYALVAAAGKGTRLGADLPKAYVSLRGRTLLERSVAAIETAEVADEILVIIHPEMEDYAR 64
Query 68 QIL-GHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALR 126
++L GH V GG+ R D+V L + VL+HDAARALTPP L+ARV A+
Sbjct 65 RVLDGHDITFVHGGAERFDSVAQGLKAIPDA--DGVVLIHDAARALTPPGLIARVARAVL 122
Query 127 DGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLP 186
+G AV+P +P++DTIK V + V+ TP+R+ LRAVQTPQGF LR+ P
Sbjct 123 EGNEAVIPTIPVADTIKVVKDHAVI-DTPDRSTLRAVQTPQGFNL-AALRAANEEFFAHP 180
Query 187 AAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAI 228
+ TDDAS++EH G V V GDP+AFKITT +DLLLA+ I
Sbjct 181 -FDATDDASIMEHAGHTVTTVTGDPMAFKITTPIDLLLAEHI 221
>gi|227496788|ref|ZP_03927059.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Actinomyces
urogenitalis DSM 15434]
gi|226833704|gb|EEH66087.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Actinomyces
urogenitalis DSM 15434]
Length=259
Score = 171 bits (433), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 119/259 (46%), Positives = 152/259 (59%), Gaps = 38/259 (14%)
Query 8 VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRT---- 63
+VAI+ AAGSG RL PKA L G +L+ RA GLLDSGV+D +VV PAD+
Sbjct 1 MVAILTAAGSGTRLGAQCPKALVPLAGVSLLRRAARGLLDSGVIDHLVVTAPADQVPVFA 60
Query 64 ---DEARQILGHRAMIVAGGS-NRTDTVNLALT-VLSGTAEPEFVLVHDAARALTPPALV 118
D Q +VAG +R +V L LT VL + + VLVHDAARALTPPA++
Sbjct 61 AELDALGQAGAVTVQVVAGSPRSRQASVALGLTAVLKACPQAQVVLVHDAARALTPPAVI 120
Query 119 ARVVEALRDGYAAVVPVLPLSDTIKAVDA-----------------------NGV--VLG 153
RVV A+R G+ AVVP LP++DT+K V A +GV V+
Sbjct 121 QRVVAAVRAGHGAVVPALPVTDTVKEVRAAEGVSPAPAQAGEDRAATQRCADDGVEQVVA 180
Query 154 TPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAE---YTDDASLVEHIGGQVQVVDGD 210
TP+R LRAVQTPQGF T+ LL +++ G+ D E +DDA LVE GG V VV GD
Sbjct 181 TPDRTRLRAVQTPQGFATETLLSAHRLGA-DRAGDEALAASDDAGLVEAAGGSVVVVPGD 239
Query 211 PLAFKITTKLDLLLAQAIV 229
P++ K+TT LDL LA+ +V
Sbjct 240 PMSLKVTTPLDLALAEVLV 258
>gi|300780459|ref|ZP_07090315.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Corynebacterium
genitalium ATCC 33030]
gi|300534569|gb|EFK55628.1| 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Corynebacterium
genitalium ATCC 33030]
Length=249
Score = 171 bits (432), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 106/228 (47%), Positives = 141/228 (62%), Gaps = 7/228 (3%)
Query 8 VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEAR 67
VVA+V AAG G RL +PKA+ L G+TL+ER+V + S +VD + V V D AR
Sbjct 8 VVALVAAAGRGTRLGADIPKAYVPLRGRTLLERSVAAMETSEIVDHIGVIVSPDMEPLAR 67
Query 68 QIL-GHRAMIVAGGSNRTDTVNLALTVLSGTAE--PEFVLVHDAARALTPPALVARVVEA 124
++L GH + G R +V + +S E VL+HDAARALTPP ++ARV
Sbjct 68 RLLHGHDVQFIHGAGERAGSVWEGIKAVSLIDELATSAVLIHDAARALTPPGMIARVAME 127
Query 125 LRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRS----YQR 180
+ G AV+PVLP++DTIK VDA G V+ TP+R+ LRAVQTPQGF + L + + +
Sbjct 128 VLAGAPAVIPVLPVADTIKRVDAAGTVVDTPDRSSLRAVQTPQGFDLETLRAANEAYFGK 187
Query 181 GSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAI 228
G+ TDDASL+E G V V GDP+AFKITT +DL+LA+ I
Sbjct 188 GAAGATGFVPTDDASLMEWFGVPVATVQGDPMAFKITTPIDLVLAKRI 235
>gi|300859177|ref|YP_003784160.1| 4-diphosphocytidyl-2C-methyl-D-erythritolsynthase [Corynebacterium
pseudotuberculosis FRC41]
gi|300686631|gb|ADK29553.1| 4-diphosphocytidyl-2C-methyl-D-erythritolsynthase [Corynebacterium
pseudotuberculosis FRC41]
Length=257
Score = 171 bits (432), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 109/232 (47%), Positives = 141/232 (61%), Gaps = 16/232 (6%)
Query 8 VVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEAR 67
VV IV AAG G+RL +PKA+ L G L+ R+V ++ SG+VD V+V + + A
Sbjct 17 VVGIVAAAGKGKRLGAELPKAYVPLRGTALLVRSVQAMITSGIVDEVLVIISPEMQGYAE 76
Query 68 QILGHRAMI---------VAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALV 118
ILG ++ V GG+ R D+V L L + VL+HD+ARALTPP ++
Sbjct 77 HILGQAGLLPSQEIPVRLVHGGAERADSVWCGLQSLPD--KDAVVLIHDSARALTPPGMI 134
Query 119 ARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLL-LRS 177
ARV A+ +G AVVPVLP++DTIK VD VL TP R+ LRAVQTPQGF DL LR+
Sbjct 135 ARVARAVLEGAEAVVPVLPVADTIKEVDGTE-VLRTPARSSLRAVQTPQGF--DLAQLRA 191
Query 178 YQRGSLD-LPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAI 228
+ P TDDASL+E G VQ V GDP+AFK+TT LD LA+A+
Sbjct 192 ANLAYFEQQPEFIATDDASLMEWFGVSVQCVQGDPMAFKVTTPLDYALAKAV 243
Lambda K H
0.318 0.136 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 303731659968
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40