BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3584 Length=182 Score E Sequences producing significant alignments: (Bits) Value gi|15843197|ref|NP_338234.1| hypothetical protein MT3690 [Mycoba... 363 5e-99 gi|289555848|ref|ZP_06445058.1| lipoprotein lpqE [Mycobacterium ... 363 6e-99 gi|15610720|ref|NP_218101.1| lipoprotein LpqE [Mycobacterium tub... 363 6e-99 gi|340628550|ref|YP_004747002.1| putative lipoprotein LPQE [Myco... 362 2e-98 gi|289763763|ref|ZP_06523141.1| lipoprotein lpqE [Mycobacterium ... 291 2e-77 gi|240172170|ref|ZP_04750829.1| lipoprotein LpqE [Mycobacterium ... 267 6e-70 gi|183985052|ref|YP_001853343.1| lipoprotein LpqE [Mycobacterium... 261 3e-68 gi|118619339|ref|YP_907671.1| lipoprotein LpqE [Mycobacterium ul... 258 2e-67 gi|254822709|ref|ZP_05227710.1| LpqE [Mycobacterium intracellula... 252 2e-65 gi|41406572|ref|NP_959408.1| LpqE [Mycobacterium avium subsp. pa... 249 8e-65 gi|118463593|ref|YP_879849.1| LpqE protein [Mycobacterium avium ... 248 2e-64 gi|342862422|ref|ZP_08719062.1| LpqE [Mycobacterium colombiense ... 232 2e-59 gi|296166639|ref|ZP_06849066.1| LpqE protein [Mycobacterium para... 231 3e-59 gi|15827083|ref|NP_301346.1| lipoprotein [Mycobacterium leprae T... 221 3e-56 gi|289747421|ref|ZP_06506799.1| lipoprotein lpqE [Mycobacterium ... 213 8e-54 gi|120406289|ref|YP_956118.1| hypothetical protein Mvan_5341 [My... 186 2e-45 gi|315446223|ref|YP_004079102.1| hypothetical protein Mspyr1_472... 171 4e-41 gi|145222035|ref|YP_001132713.1| hypothetical protein Mflv_1443 ... 171 4e-41 gi|126437691|ref|YP_001073382.1| hypothetical protein Mjls_5127 ... 159 2e-37 gi|108801704|ref|YP_641901.1| hypothetical protein Mmcs_4741 [My... 158 4e-37 gi|118467981|ref|YP_890300.1| LpqE protein [Mycobacterium smegma... 152 3e-35 gi|333992516|ref|YP_004525130.1| hypothetical protein JDM601_387... 147 8e-34 gi|169627670|ref|YP_001701319.1| putative lipoprotein lpqE [Myco... 137 6e-31 gi|312138096|ref|YP_004005432.1| lipoprotein [Rhodococcus equi 1... 85.5 3e-15 gi|333918029|ref|YP_004491610.1| LpqE protein [Amycolicicoccus s... 82.0 4e-14 gi|226304174|ref|YP_002764132.1| hypothetical protein RER_06850 ... 77.0 1e-12 gi|111021430|ref|YP_704402.1| hypothetical protein RHA1_ro04458 ... 74.3 7e-12 gi|331699820|ref|YP_004336059.1| hypothetical protein Psed_6103 ... 73.2 1e-11 gi|343925919|ref|ZP_08765434.1| hypothetical protein GOALK_050_0... 73.2 1e-11 gi|226363786|ref|YP_002781568.1| hypothetical protein ROP_43760 ... 71.2 6e-11 gi|54022397|ref|YP_116639.1| hypothetical protein nfa4330 [Nocar... 70.9 8e-11 gi|325000161|ref|ZP_08121273.1| hypothetical protein PseP1_15403... 69.7 2e-10 gi|296138334|ref|YP_003645577.1| hypothetical protein Tpau_0600 ... 68.2 5e-10 gi|134097050|ref|YP_001102711.1| hypothetical protein SACE_0437 ... 61.2 7e-08 gi|262200965|ref|YP_003272173.1| hypothetical protein Gbro_0969 ... 59.7 2e-07 gi|302530714|ref|ZP_07283056.1| predicted protein [Streptomyces ... 59.7 2e-07 gi|8439561|gb|AAF74991.1|AF143398_1 exported protein 996A010 [My... 58.5 4e-07 gi|331697268|ref|YP_004333507.1| hypothetical protein Psed_3472 ... 52.8 2e-05 gi|258651109|ref|YP_003200265.1| hypothetical protein Namu_0865 ... 52.4 3e-05 gi|284990816|ref|YP_003409370.1| hypothetical protein Gobs_2320 ... 51.2 7e-05 gi|334564019|ref|ZP_08517010.1| putative secreted protein [Coryn... 50.1 1e-04 gi|340793470|ref|YP_004758933.1| hypothetical protein CVAR_3062 ... 47.8 8e-04 gi|269124962|ref|YP_003298332.1| hypothetical protein Tcur_0701 ... 45.8 0.003 gi|237784958|ref|YP_002905663.1| hypothetical protein ckrop_0341... 45.1 0.004 gi|340532168|gb|AEK47373.1| hypothetical protein RAM_44530 [Amyc... 44.3 0.007 gi|300790483|ref|YP_003770774.1| hypothetical protein AMED_8677 ... 44.3 0.009 gi|227505964|ref|ZP_03936013.1| secreted protein [Corynebacteriu... 43.5 0.015 gi|257057464|ref|YP_003135296.1| hypothetical protein Svir_35080... 42.7 0.022 gi|336324773|ref|YP_004604739.1| hypothetical protein CRES_0212 ... 42.0 0.040 gi|284989241|ref|YP_003407795.1| hypothetical protein Gobs_0646 ... 41.6 0.045 >gi|15843197|ref|NP_338234.1| hypothetical protein MT3690 [Mycobacterium tuberculosis CDC1551] gi|254234157|ref|ZP_04927481.1| lipoprotein lpqE [Mycobacterium tuberculosis C] gi|308379549|ref|ZP_07486717.2| lipoprotein lpqE [Mycobacterium tuberculosis SUMu010] gi|13883550|gb|AAK48048.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|124603825|gb|EAY61788.1| lipoprotein lpqE [Mycobacterium tuberculosis C] gi|308356658|gb|EFP45509.1| lipoprotein lpqE [Mycobacterium tuberculosis SUMu010] Length=238 Score = 363 bits (932), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 182/182 (100%), Positives = 182/182 (100%), Gaps = 0/182 (0%) Query 1 VNRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDI 60 VNRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDI Sbjct 57 VNRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDI 116 Query 61 RIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFV 120 RIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFV Sbjct 117 RIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFV 176 Query 121 GTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLATP 180 GTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLATP Sbjct 177 GTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLATP 236 Query 181 HE 182 HE Sbjct 237 HE 238 >gi|289555848|ref|ZP_06445058.1| lipoprotein lpqE [Mycobacterium tuberculosis KZN 605] gi|289440480|gb|EFD22973.1| lipoprotein lpqE [Mycobacterium tuberculosis KZN 605] Length=193 Score = 363 bits (932), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 182/182 (100%), Positives = 182/182 (100%), Gaps = 0/182 (0%) Query 1 VNRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDI 60 VNRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDI Sbjct 12 VNRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDI 71 Query 61 RIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFV 120 RIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFV Sbjct 72 RIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFV 131 Query 121 GTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLATP 180 GTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLATP Sbjct 132 GTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLATP 191 Query 181 HE 182 HE Sbjct 192 HE 193 >gi|15610720|ref|NP_218101.1| lipoprotein LpqE [Mycobacterium tuberculosis H37Rv] gi|31794761|ref|NP_857254.1| lipoprotein LpqE [Mycobacterium bovis AF2122/97] gi|121639504|ref|YP_979728.1| putative lipoprotein lpqE [Mycobacterium bovis BCG str. Pasteur 1173P2] 68 more sequence titles Length=182 Score = 363 bits (932), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 181/182 (99%), Positives = 182/182 (100%), Gaps = 0/182 (0%) Query 1 VNRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDI 60 +NRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDI Sbjct 1 MNRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDI 60 Query 61 RIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFV 120 RIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFV Sbjct 61 RIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFV 120 Query 121 GTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLATP 180 GTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLATP Sbjct 121 GTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLATP 180 Query 181 HE 182 HE Sbjct 181 HE 182 >gi|340628550|ref|YP_004747002.1| putative lipoprotein LPQE [Mycobacterium canettii CIPT 140010059] gi|340006740|emb|CCC45928.1| putative conserved lipoprotein LPQE [Mycobacterium canettii CIPT 140010059] Length=182 Score = 362 bits (928), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 180/182 (99%), Positives = 182/182 (100%), Gaps = 0/182 (0%) Query 1 VNRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDI 60 +NRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQ+PAVNGNRLTINNVLLRDI Sbjct 1 MNRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQEPAVNGNRLTINNVLLRDI 60 Query 61 RIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFV 120 RIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFV Sbjct 61 RIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFV 120 Query 121 GTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLATP 180 GTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLATP Sbjct 121 GTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLATP 180 Query 181 HE 182 HE Sbjct 181 HE 182 >gi|289763763|ref|ZP_06523141.1| lipoprotein lpqE [Mycobacterium tuberculosis GM 1503] gi|289711269|gb|EFD75285.1| lipoprotein lpqE [Mycobacterium tuberculosis GM 1503] Length=179 Score = 291 bits (746), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 146/146 (100%), Positives = 146/146 (100%), Gaps = 0/146 (0%) Query 37 QTANQKPAVNGNRLTINNVLLRDIRIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVG 96 QTANQKPAVNGNRLTINNVLLRDIRIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVG Sbjct 34 QTANQKPAVNGNRLTINNVLLRDIRIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVG 93 Query 97 ITSDIGSVTVAGDARLPASGMLFVGTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYN 156 ITSDIGSVTVAGDARLPASGMLFVGTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYN Sbjct 94 ITSDIGSVTVAGDARLPASGMLFVGTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYN 153 Query 157 FTFKFEKAGQGSVMVPISAGLATPHE 182 FTFKFEKAGQGSVMVPISAGLATPHE Sbjct 154 FTFKFEKAGQGSVMVPISAGLATPHE 179 >gi|240172170|ref|ZP_04750829.1| lipoprotein LpqE [Mycobacterium kansasii ATCC 12478] Length=185 Score = 267 bits (682), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 135/183 (74%), Positives = 155/183 (85%), Gaps = 7/183 (3%) Query 1 VNRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDI 60 +NR IRL L G+ +AL+AA +S CG GQISQTANQ+PAVNGNR+TINNV LRDI Sbjct 1 MNRFKIRLTLVGL------VALIAALVSACGTGQISQTANQEPAVNGNRITINNVALRDI 54 Query 61 RIQAVQTS-DFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLF 119 RIQA+Q DF++PG+ VDLVLVAVNQSPDV+DRLV I SDIG+VT+ GDARLPA GMLF Sbjct 55 RIQALQRHGDFLEPGRKVDLVLVAVNQSPDVADRLVSIGSDIGTVTMTGDARLPAGGMLF 114 Query 120 VGTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLAT 179 VGTPDGQ+VAPGPL SNQAA+A+V LTKPI NGLTY+FTF FEKAGQG+VMVPI+A LA Sbjct 115 VGTPDGQLVAPGPLGSNQAARASVVLTKPITNGLTYSFTFNFEKAGQGTVMVPIAAPLAQ 174 Query 180 PHE 182 PHE Sbjct 175 PHE 177 >gi|183985052|ref|YP_001853343.1| lipoprotein LpqE [Mycobacterium marinum M] gi|183178378|gb|ACC43488.1| conserved hypothetical lipoprotein LpqE [Mycobacterium marinum M] Length=185 Score = 261 bits (667), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 135/182 (75%), Positives = 150/182 (83%), Gaps = 7/182 (3%) Query 1 VNRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDI 60 +N IRL G+ +AL A LSGCGAGQISQTA+Q+ AVNGNRLTINNV LRDI Sbjct 1 MNLFKIRLVSVGL------VALTATLLSGCGAGQISQTASQESAVNGNRLTINNVALRDI 54 Query 61 RIQAVQ-TSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLF 119 RIQA+Q TSDF++PG VDLVLVAVNQSPD+SDRLV ITSDIG VT+ GDA+LPA GMLF Sbjct 55 RIQALQRTSDFLRPGHNVDLVLVAVNQSPDLSDRLVSITSDIGKVTMTGDAQLPAGGMLF 114 Query 120 VGTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLAT 179 +GTPDGQ+VAPGPL SN++AKATV L KPI NGL YNFTF FEKAGQGSVMVPISA LA Sbjct 115 IGTPDGQLVAPGPLDSNESAKATVALAKPITNGLMYNFTFNFEKAGQGSVMVPISAPLAE 174 Query 180 PH 181 PH Sbjct 175 PH 176 >gi|118619339|ref|YP_907671.1| lipoprotein LpqE [Mycobacterium ulcerans Agy99] gi|118571449|gb|ABL06200.1| conserved hypothetical lipoprotein LpqE [Mycobacterium ulcerans Agy99] Length=185 Score = 258 bits (660), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 134/182 (74%), Positives = 149/182 (82%), Gaps = 7/182 (3%) Query 1 VNRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDI 60 +N IRL G+ +AL A LSGCGAGQISQTA+Q+ AVNGNRLTINNV LRDI Sbjct 1 MNLFKIRLVSVGL------VALTATLLSGCGAGQISQTASQESAVNGNRLTINNVALRDI 54 Query 61 RIQAVQ-TSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLF 119 RIQA+Q TSDF++PG VDLVLVAVNQSPD+SDRLV ITSDIG VT+ GDA+LPA GMLF Sbjct 55 RIQALQRTSDFLRPGHNVDLVLVAVNQSPDLSDRLVSITSDIGKVTMTGDAQLPAGGMLF 114 Query 120 VGTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLAT 179 + TPDGQ+VAPGPL SN++AKATV L KPI NGL YNFTF FEKAGQGSVMVPISA LA Sbjct 115 IDTPDGQLVAPGPLDSNESAKATVALAKPITNGLMYNFTFNFEKAGQGSVMVPISAPLAE 174 Query 180 PH 181 PH Sbjct 175 PH 176 >gi|254822709|ref|ZP_05227710.1| LpqE [Mycobacterium intracellulare ATCC 13950] Length=182 Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 124/182 (69%), Positives = 148/182 (82%), Gaps = 4/182 (2%) Query 1 VNRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDI 60 +NR IRL L G +A +LAA LSGCGAGQ+SQ A Q+PA+NGN++T NNV LR+I Sbjct 1 MNRFKIRLGLPG----IAVAGVLAALLSGCGAGQVSQMAVQEPAINGNKVTFNNVALRNI 56 Query 61 RIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFV 120 IQA QT DF+QPG+AVDLVLVAVNQSP DRLVGITSD+G+V ++GD RLPA GMLF+ Sbjct 57 HIQATQTGDFLQPGRAVDLVLVAVNQSPTTPDRLVGITSDVGAVAISGDTRLPAGGMLFI 116 Query 121 GTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLATP 180 GTP+GQ VAPGP+ S+ AAKATV L KPI+NGLTYNFTF FEKAGQ +V+VPISAG+ P Sbjct 117 GTPEGQKVAPGPIDSSTAAKATVTLAKPISNGLTYNFTFNFEKAGQATVLVPISAGVTPP 176 Query 181 HE 182 H+ Sbjct 177 HQ 178 >gi|41406572|ref|NP_959408.1| LpqE [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394921|gb|AAS02791.1| LpqE [Mycobacterium avium subsp. paratuberculosis K-10] gi|336458468|gb|EGO37441.1| hypothetical protein MAPs_12560 [Mycobacterium avium subsp. paratuberculosis S397] Length=188 Score = 249 bits (637), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 126/181 (70%), Positives = 148/181 (82%), Gaps = 3/181 (1%) Query 1 VNRCNIRLRLAGMTTWVA---SIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLL 57 +NR IRL L VA ++A+ A LSGCGAGQ+SQ A Q+PA+NGN++T NNV L Sbjct 1 MNRFKIRLGLPARAVRVALAGAVAVPAVLLSGCGAGQVSQMAVQEPAINGNKVTFNNVAL 60 Query 58 RDIRIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGM 117 RDIRIQAVQT DF+QPG+AVDLV VAVNQSP+ D+LVGIT+DIG+VT++GD RLPA GM Sbjct 61 RDIRIQAVQTGDFLQPGRAVDLVAVAVNQSPNTPDKLVGITTDIGTVTLSGDTRLPAGGM 120 Query 118 LFVGTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGL 177 LF+GTP+GQ VAPGP+ SN AAKATV L KPI NGLTYNFTF FEKAGQ SV+VPISAG+ Sbjct 121 LFIGTPEGQKVAPGPIGSNTAAKATVTLAKPITNGLTYNFTFSFEKAGQASVLVPISAGV 180 Query 178 A 178 A Sbjct 181 A 181 >gi|118463593|ref|YP_879849.1| LpqE protein [Mycobacterium avium 104] gi|254773527|ref|ZP_05215043.1| LpqE protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118164880|gb|ABK65777.1| LpqE protein [Mycobacterium avium 104] Length=188 Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 125/181 (70%), Positives = 148/181 (82%), Gaps = 3/181 (1%) Query 1 VNRCNIRLRLAGMTTWVA---SIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLL 57 +NR IRL L VA ++A+ A LSGCGAGQ+SQ A Q+PA+NGN++T NNV L Sbjct 1 MNRFKIRLGLPARAVRVALAGAVAVPAVLLSGCGAGQVSQMAVQEPAINGNKVTFNNVAL 60 Query 58 RDIRIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGM 117 RDIRIQAVQT DF+QPG+AV+LV VAVNQSP+ D+LVGIT+DIG+VT++GD RLPA GM Sbjct 61 RDIRIQAVQTGDFLQPGRAVELVAVAVNQSPNTPDKLVGITTDIGTVTLSGDTRLPAGGM 120 Query 118 LFVGTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGL 177 LF+GTP+GQ VAPGP+ SN AAKATV L KPI NGLTYNFTF FEKAGQ SV+VPISAG+ Sbjct 121 LFIGTPEGQKVAPGPIGSNTAAKATVTLAKPITNGLTYNFTFSFEKAGQASVLVPISAGV 180 Query 178 A 178 A Sbjct 181 A 181 >gi|342862422|ref|ZP_08719062.1| LpqE [Mycobacterium colombiense CECT 3035] gi|342130093|gb|EGT83427.1| LpqE [Mycobacterium colombiense CECT 3035] Length=186 Score = 232 bits (591), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 127/183 (70%), Positives = 147/183 (81%), Gaps = 2/183 (1%) Query 1 VNRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDI 60 +NR IRL L A +A+LAA LSGCGAGQ+SQ A Q+PA+NGN++T NNV LR+I Sbjct 1 MNRFKIRLGLP-ALAVAAVMAVLAALLSGCGAGQVSQMAVQEPAINGNKVTFNNVALRNI 59 Query 61 RIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFV 120 IQA QT D++QPG+ VDLVLVAVN SP+ DRLVGITSDIG+VTV+GDARLPA G LFV Sbjct 60 HIQANQTGDYLQPGRTVDLVLVAVNLSPNSPDRLVGITSDIGTVTVSGDARLPAGGSLFV 119 Query 121 GTPDGQIVAPGPL-PSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLAT 179 GTP+GQ VAPGP+ P AAKATVNL KPI+NGLTYNFTF FEKAGQ +V VPISAGLA Sbjct 120 GTPEGQKVAPGPVGPDTTAAKATVNLAKPISNGLTYNFTFTFEKAGQATVAVPISAGLAP 179 Query 180 PHE 182 P + Sbjct 180 PQQ 182 >gi|296166639|ref|ZP_06849066.1| LpqE protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898011|gb|EFG77590.1| LpqE protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=176 Score = 231 bits (589), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 113/175 (65%), Positives = 138/175 (79%), Gaps = 3/175 (1%) Query 8 LRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAVQT 67 ++ A + + A +A+L LSGCGAGQ+SQ A Q+PA+NGN++TI NV LR+I I+A QT Sbjct 4 VKRAALIGFAAVVAIL---LSGCGAGQVSQMAVQEPAINGNKVTIKNVALRNIHIRAAQT 60 Query 68 SDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFVGTPDGQI 127 DF+QPG+ VDLVLVA NQSPD DRLV ITSD+GSV ++GD RLPA GML +GTPDGQ Sbjct 61 GDFLQPGRTVDLVLVATNQSPDTPDRLVSITSDVGSVALSGDGRLPAGGMLLIGTPDGQK 120 Query 128 VAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLATPHE 182 VAPGP+ S+ AAKATV L KPI NGL YNFTF FEKAGQ +V+VP+SAGL P + Sbjct 121 VAPGPVGSSNAAKATVTLAKPITNGLLYNFTFNFEKAGQATVLVPVSAGLEPPQQ 175 >gi|15827083|ref|NP_301346.1| lipoprotein [Mycobacterium leprae TN] gi|221229561|ref|YP_002502977.1| putative lipoprotein [Mycobacterium leprae Br4923] gi|17433152|sp|Q9ZBM7.1|LPQE_MYCLE RecName: Full=Putative lipoprotein lpqE; Flags: Precursor gi|4154038|emb|CAA22686.1| putative lipoprotein [Mycobacterium leprae] gi|13092631|emb|CAC29827.1| putative lipoprotein [Mycobacterium leprae] gi|219932668|emb|CAR70412.1| putative lipoprotein [Mycobacterium leprae Br4923] Length=183 Score = 221 bits (564), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 111/176 (64%), Positives = 135/176 (77%), Gaps = 3/176 (1%) Query 6 IRLRLAGMTTWVA---SIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDIRI 62 ++ L + T VA + L+A+ L GCGAGQISQTA Q+PAVNGNR+T+NN+ LRDIRI Sbjct 4 FKISLPALATRVAVLGFLTLMASVLGGCGAGQISQTATQEPAVNGNRVTLNNLALRDIRI 63 Query 63 QAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFVGT 122 QA QT DF+Q G+ VDL+LVA+N SP V+DRLV ITSDIG+V + G +LP +GMLF+GT Sbjct 64 QAAQTGDFLQSGRTVDLMLVAINNSPYVTDRLVSITSDIGTVALNGYTQLPTNGMLFIGT 123 Query 123 PDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLA 178 +GQ + P PL SN AKA V L KPI NGLTYNFTF FEKAGQ +V VP+SAGLA Sbjct 124 SEGQRIKPPPLQSNNIAKAIVTLAKPITNGLTYNFTFNFEKAGQANVAVPVSAGLA 179 >gi|289747421|ref|ZP_06506799.1| lipoprotein lpqE [Mycobacterium tuberculosis 02_1987] gi|289687949|gb|EFD55437.1| lipoprotein lpqE [Mycobacterium tuberculosis 02_1987] Length=199 Score = 213 bits (543), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 108/108 (100%), Positives = 108/108 (100%), Gaps = 0/108 (0%) Query 1 VNRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDI 60 VNRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDI Sbjct 57 VNRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDI 116 Query 61 RIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAG 108 RIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAG Sbjct 117 RIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAG 164 >gi|120406289|ref|YP_956118.1| hypothetical protein Mvan_5341 [Mycobacterium vanbaalenii PYR-1] gi|119959107|gb|ABM16112.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=195 Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 95/171 (56%), Positives = 122/171 (72%), Gaps = 1/171 (0%) Query 9 RLAGMTTWVASIALLAAA-LSGCGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAVQT 67 R + + T +A+ L A+ LSGC AGQ+SQTA Q+PAVNG T + LR++ I+A QT Sbjct 6 RRSSVLTTLAACGLAASVVLSGCSAGQVSQTATQEPAVNGTSATAGPIALRNVHIRADQT 65 Query 68 SDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFVGTPDGQI 127 D++QPG V+L+ VA N SPDV+D+LV ITSDIGSVT+ GD +P +G+L VG+PDGQI Sbjct 66 KDYVQPGTEVELIFVAANTSPDVADKLVSITSDIGSVTLTGDGEVPVNGVLVVGSPDGQI 125 Query 128 VAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLA 178 + AA+A V L+KPI NGLTY+FTFKFE AG+ V VPISAG A Sbjct 126 TPLESIEPADAAEAKVELSKPITNGLTYDFTFKFENAGETIVAVPISAGEA 176 >gi|315446223|ref|YP_004079102.1| hypothetical protein Mspyr1_47240 [Mycobacterium sp. Spyr1] gi|315264526|gb|ADU01268.1| hypothetical protein Mspyr1_47240 [Mycobacterium sp. Spyr1] Length=196 Score = 171 bits (433), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 86/171 (51%), Positives = 117/171 (69%), Gaps = 1/171 (0%) Query 9 RLAGMTTWVASIALLAAALSG-CGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAVQT 67 R + + +++ L A+ L G C AGQ+SQTA Q+PA+NG + LR++ + QT Sbjct 6 RRSSVVAAISTCGLAASVLLGACSAGQVSQTATQEPAINGTSGLAGAIALRNVHLAVTQT 65 Query 68 SDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFVGTPDGQI 127 +D+IQPG VDL+ VA N S DV+D+L GITSD+G VT+ G +P +G+L VGTPDGQ Sbjct 66 TDYIQPGTEVDLIFVAANTSADVADKLTGITSDVGEVTLTGAGDVPVNGVLVVGTPDGQE 125 Query 128 VAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLA 178 A + + +A+A V L+KPI NGLTY+FTF FEKAG+ +V VPISAG A Sbjct 126 TALSSIEAADSAEAKVELSKPITNGLTYDFTFSFEKAGEVTVAVPISAGEA 176 >gi|145222035|ref|YP_001132713.1| hypothetical protein Mflv_1443 [Mycobacterium gilvum PYR-GCK] gi|145214521|gb|ABP43925.1| hypothetical protein Mflv_1443 [Mycobacterium gilvum PYR-GCK] Length=254 Score = 171 bits (433), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 87/171 (51%), Positives = 117/171 (69%), Gaps = 1/171 (0%) Query 9 RLAGMTTWVASIALLAAALSG-CGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAVQT 67 R + + +A+ L A+ L G C AGQ+SQTA Q+PA+NG + LR++ + QT Sbjct 64 RRSSVVAAMATCGLAASVLLGACSAGQVSQTATQEPAINGTSGLAGAIALRNVHLAVTQT 123 Query 68 SDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFVGTPDGQI 127 +D+IQPG VDL+ VA N S DV+D+L GITSD+G VT+ G +P +G+L VGTPDGQ Sbjct 124 TDYIQPGTEVDLIFVAANTSADVADKLTGITSDVGEVTLTGAGDVPVNGVLVVGTPDGQE 183 Query 128 VAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLA 178 A + + +A+A V L+KPI NGLTY+FTF FEKAG+ +V VPISAG A Sbjct 184 TALSSIEAADSAEAKVELSKPITNGLTYDFTFSFEKAGEVTVAVPISAGEA 234 >gi|126437691|ref|YP_001073382.1| hypothetical protein Mjls_5127 [Mycobacterium sp. JLS] gi|126237491|gb|ABO00892.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=192 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 87/173 (51%), Positives = 113/173 (66%), Gaps = 1/173 (0%) Query 6 IRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAV 65 I R + +T +A+ L A AL+ CG+GQISQTA Q PAVNG +V LR++ ++A Sbjct 4 IHPRASAVTAGLAACGL-AFALTACGSGQISQTATQAPAVNGVNAGTGDVSLRNVHLRAP 62 Query 66 QTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFVGTPDG 125 QTSD+++PG V+L+ VA N SPD D+LV I SDIGSV V G A + G+L G PDG Sbjct 63 QTSDYVRPGSDVELLFVATNDSPDQPDKLVSIRSDIGSVPVRGKADIAPGGVLVAGEPDG 122 Query 126 QIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLA 178 Q A + + + V LTKPI NGLTY FTF FE++G+ +V VPISAG A Sbjct 123 QTAALESVEAAEPLTVDVKLTKPITNGLTYPFTFTFERSGEVTVQVPISAGEA 175 >gi|108801704|ref|YP_641901.1| hypothetical protein Mmcs_4741 [Mycobacterium sp. MCS] gi|119870855|ref|YP_940807.1| hypothetical protein Mkms_4827 [Mycobacterium sp. KMS] gi|108772123|gb|ABG10845.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696944|gb|ABL94017.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=192 Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 87/173 (51%), Positives = 112/173 (65%), Gaps = 1/173 (0%) Query 6 IRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAV 65 I R + +T +A+ L A AL+ CG+GQISQTA Q PAVNG +V LR++ ++A Sbjct 4 IHPRASAVTAGLAACGL-AFALTACGSGQISQTATQAPAVNGVNAGTGDVSLRNVHLRAP 62 Query 66 QTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGMLFVGTPDG 125 QTSD+++PG V+L+ VA N SPD D+LV I SDIGSV V G A + G+L G PDG Sbjct 63 QTSDYVRPGSDVELLFVATNDSPDQPDKLVSIRSDIGSVPVRGKADIAPGGVLVAGEPDG 122 Query 126 QIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLA 178 Q A + + V LTKPI NGLTY FTF FE++G+ +V VPISAG A Sbjct 123 QTAALESVEPAEPLTVDVKLTKPITNGLTYPFTFAFERSGEVTVQVPISAGEA 175 >gi|118467981|ref|YP_890300.1| LpqE protein [Mycobacterium smegmatis str. MC2 155] gi|118169268|gb|ABK70164.1| LpqE protein [Mycobacterium smegmatis str. MC2 155] Length=186 Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 86/178 (49%), Positives = 113/178 (64%), Gaps = 11/178 (6%) Query 1 VNRCNIRLRLA--GMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLR 58 +NR + R LA G+ T VA L+ C AGQISQT Q+PAVNG V LR Sbjct 1 MNRFSSRAGLAVCGLATAVA--------LTACSAGQISQTTTQEPAVNGVNAQAGQVSLR 52 Query 59 DIRIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTVAGDARLPASGML 118 ++ ++A Q +D+++PG V+L+ VA N S + S++L ITSD+G VT+ GD+ +PA G+L Sbjct 53 NVHLRAPQQTDYVEPGTTVELLFVAANDSTEGSNKLKSITSDVGEVTLTGDSTVPADGVL 112 Query 119 FVGTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAG 176 VG PDGQI A + A A V LTKPI NGL Y+FTF FE G+ +V VPISAG Sbjct 113 IVGEPDGQIQAVENAEAADAVTAEVELTKPITNGLLYDFTFTFED-GETTVAVPISAG 169 >gi|333992516|ref|YP_004525130.1| hypothetical protein JDM601_3876 [Mycobacterium sp. JDM601] gi|333488484|gb|AEF37876.1| lipoprotein LpqE [Mycobacterium sp. JDM601] Length=178 Score = 147 bits (370), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 78/160 (49%), Positives = 102/160 (64%), Gaps = 7/160 (4%) Query 29 GCGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAVQTSDFIQPGKAVDLVLVAVNQSP 88 GCG GQISQ+A+Q PAVNG T+ ++ LRD+RIQAVQ D ++ G+ VDL+ VA NQS Sbjct 19 GCGTGQISQSADQAPAVNGTSATVGDLALRDVRIQAVQDGDALEAGQTVDLLFVATNQST 78 Query 89 DVSDRLVGITSDIGSVTVAGDARLPASGMLFVGTPDGQIVAPGP-------LPSNQAAKA 141 D + L GI+S IG V+V G +PA G+L V P G + P + + A A Sbjct 79 DTGEELTGISSSIGKVSVVGGRSVPAGGVLVVSAPAGPDLPTAPASKALSEVSNASTAAA 138 Query 142 TVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLATPH 181 TV L K I+NGLTY+FTF F+ AG + VPISAG+ + H Sbjct 139 TVTLDKAISNGLTYDFTFDFKNAGPVRIAVPISAGVLSHH 178 >gi|169627670|ref|YP_001701319.1| putative lipoprotein lpqE [Mycobacterium abscessus ATCC 19977] gi|169239637|emb|CAM60665.1| Putative lipoprotein lpqE precursor [Mycobacterium abscessus] Length=227 Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 86/197 (44%), Positives = 115/197 (59%), Gaps = 37/197 (18%) Query 21 ALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAVQTSDFIQ--PGKAVD 78 A+LA AL+GCGAGQISQTANQ A+NG + + LR+I + V SD ++ G+ + Sbjct 20 AVLATALTGCGAGQISQTANQSSAINGGSANLGKLALRNIHL--VGNSDPVKQRAGQKAE 77 Query 79 LVLVAVNQSPDVSDRLVGITS--DIGSVTVAGDARLPASGMLFVGTPDGQ---------- 126 LVLV N+S D+SD+L ITS +IG VT++GD+ +PA+G LFVG+ +GQ Sbjct 78 LVLVIANESADISDKLTSITSPDEIGKVTLSGDSDIPATGRLFVGSAEGQEPPAEAKAPE 137 Query 127 -------------IVAPGPLPSNQAA--------KATVNLTKPIANGLTYNFTFKFEKAG 165 V P P QA+ KA + LTK +A+GLTY FTF FEKAG Sbjct 138 TAAPEAGSTEITTAVTPAPEAKPQASSDPAIKHGKAQLTLTKDLADGLTYRFTFTFEKAG 197 Query 166 QGSVMVPISAGLATPHE 182 + +V VPI AG P + Sbjct 198 EVTVAVPIDAGPNAPRQ 214 >gi|312138096|ref|YP_004005432.1| lipoprotein [Rhodococcus equi 103S] gi|325675000|ref|ZP_08154687.1| LpqE protein [Rhodococcus equi ATCC 33707] gi|311887435|emb|CBH46747.1| putative lipoprotein [Rhodococcus equi 103S] gi|325554586|gb|EGD24261.1| LpqE protein [Rhodococcus equi ATCC 33707] Length=198 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/162 (38%), Positives = 82/162 (51%), Gaps = 6/162 (3%) Query 27 LSGCGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAVQTSDF-IQPGKAVDLVLVAVN 85 LS CGAGQISQTA Q A+NGN+ T ++ LR++ + + +F I+PG +L AVN Sbjct 26 LSACGAGQISQTATQVAAINGNQATSGDIALRNVHVVYPNSEEFSIEPGGDAELAFTAVN 85 Query 86 QSPDVSDRLVGITSDI-GSVTV---AGDARLPASGMLFVGTPDGQIVAPGPLPSNQAAKA 141 S SDRL I +D GSV + G + L G PD + P + Sbjct 86 LSESKSDRLKSIKTDYAGSVKIDEKDGTLEIKPQFALGAGNPDVSVPEEAPEHVSLIDVT 145 Query 142 TVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLATP-HE 182 ++ + + GLT+ F FE AG V VP+ AG T HE Sbjct 146 LQDIREGVRPGLTFPVIFTFENAGDIVVQVPVDAGPKTERHE 187 >gi|333918029|ref|YP_004491610.1| LpqE protein [Amycolicicoccus subflavus DQS3-9A1] gi|333480250|gb|AEF38810.1| LpqE protein [Amycolicicoccus subflavus DQS3-9A1] Length=211 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 57/158 (37%), Positives = 78/158 (50%), Gaps = 10/158 (6%) Query 30 CGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAVQTSDF-IQPGKAVDLVLVAVNQSP 88 CGAGQ++QT P + GN + ++LLR++ I + I P + LV VN SP Sbjct 44 CGAGQVTQTGVTTPTITGNNVDFGSLLLRNVYIAYEDAEQYPIDPATSGQLVFTIVNLSP 103 Query 89 DVSDRLVGITSDIGSVTVAG-DARLPASGMLFVGTP-------DGQIVAPGPLPSNQAAK 140 SD L I S V++ G D +PA G+L GTP D + GP S + Sbjct 104 SGSDTLASIESFDAQVSIEGDDTTIPAGGVLRSGTPALQLSAEDDEAATFGPAASQITVE 163 Query 141 ATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLA 178 T N++ + G+ FTF FE+AG V VPI G A Sbjct 164 VT-NMSSAVRPGIATPFTFTFEEAGDIVVDVPIEPGPA 200 >gi|226304174|ref|YP_002764132.1| hypothetical protein RER_06850 [Rhodococcus erythropolis PR4] gi|229494625|ref|ZP_04388388.1| LpqE protein [Rhodococcus erythropolis SK121] gi|226183289|dbj|BAH31393.1| hypothetical protein RER_06850 [Rhodococcus erythropolis PR4] gi|229318987|gb|EEN84845.1| LpqE protein [Rhodococcus erythropolis SK121] Length=211 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/171 (34%), Positives = 84/171 (50%), Gaps = 30/171 (17%) Query 30 CGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAVQTSDF-IQPGKAVDLVLVAVNQSP 88 CG+GQ+SQTA Q+ AVNGN + + LR++ I + ++ I+PG L VN S Sbjct 28 CGSGQVSQTAVQQAAVNGNSADLGEIALRNVHIAYPSSEEYSIEPGGNAVLAFTVVNDSA 87 Query 89 DVSDRLVGITSDIGSVTVAGDARLPASGMLFVGTPDGQIVAPGPLPSNQAA--KATVNLT 146 + +D+LV IT+D + +AG+ G L + P + A G LP+ + A +A + Sbjct 88 ETTDKLVSITTDYAARVIAGE----EVGGLTI-KPQTSLQA-GQLPAGEGAATEAETQIK 141 Query 147 KPIAN---------------------GLTYNFTFKFEKAGQGSVMVPISAG 176 N GLT TFKFEKAG +V VP+ AG Sbjct 142 NNEENDDAPAALTLVVLQDIKAGVRPGLTVPITFKFEKAGSVTVDVPVDAG 192 >gi|111021430|ref|YP_704402.1| hypothetical protein RHA1_ro04458 [Rhodococcus jostii RHA1] gi|110820960|gb|ABG96244.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=210 Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 53/165 (33%), Positives = 82/165 (50%), Gaps = 15/165 (9%) Query 30 CGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAVQTSDF-IQPGKAVDLVLVAVNQSP 88 C AGQI+QT++Q AVNGN + ++ LR++ + ++++ ++PG L +A+N + Sbjct 28 CSAGQITQTSSQVAAVNGNSANVGSIALRNVHVVYPNSAEYSLEPGGNAVLSFIAINNNE 87 Query 89 DVSDRLVGITSDIG-SVTV---AGDARLPASGMLFVGTP----------DGQIVAPGPLP 134 D D+L I++D SVT+ AG + L G P GQ P Sbjct 88 DTPDKLTRISTDFAQSVTLGDKAGGLEIAPQTALVAGQPGEDAEASAEAAGQTDESADAP 147 Query 135 SNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLAT 179 + L + + GLT+ TF FEKAG +V VP+ AG T Sbjct 148 VDVVLVTLDGLKEGVRPGLTFPVTFAFEKAGDVTVSVPVDAGHET 192 >gi|331699820|ref|YP_004336059.1| hypothetical protein Psed_6103 [Pseudonocardia dioxanivorans CB1190] gi|326954509|gb|AEA28206.1| protein of unknown function DUF461 [Pseudonocardia dioxanivorans CB1190] Length=200 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/166 (33%), Positives = 84/166 (51%), Gaps = 15/166 (9%) Query 16 WVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQ----AVQTSDFI 71 VA + A AL+GCGAGQI+QTA Q+ AV+G +T ++ +R+ I+ Q Sbjct 14 LVAGAVVGALALAGCGAGQIAQTAEQQAAVSGANVTAQHIEIRNAEIEFPVGGSQRLAAY 73 Query 72 QPGKAVDLVLVAVNQSPDVSDRLVGITSDI-GSVTVAGDARLPASGMLFVGTPDGQIVAP 130 G + + + N D+ DRLV +S + GSV + GD +P G L T P Sbjct 74 TAGSSAPITMSIANDD-DLPDRLVSASSPVAGSVRITGDTTIPPHGALTAST------TP 126 Query 131 GPLPSNQAAKATV---NLTKPIANGLTYNFTFKFEKAGQGSVMVPI 173 G +P N + L++ ++ GL+Y FE+AG +V +P+ Sbjct 127 GGVPGNTGLPIEMTLEGLSQDVSPGLSYPLVLTFERAGNVTVDLPM 172 >gi|343925919|ref|ZP_08765434.1| hypothetical protein GOALK_050_02150 [Gordonia alkanivorans NBRC 16433] gi|343764270|dbj|GAA12360.1| hypothetical protein GOALK_050_02150 [Gordonia alkanivorans NBRC 16433] Length=236 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 64/173 (37%), Positives = 82/173 (48%), Gaps = 26/173 (15%) Query 23 LAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAVQTS--DFIQPGKAVDLV 80 +A +GCGAGQISQTANQ PAVNG + I+ + LRD++I + G +L Sbjct 27 VALGTTGCGAGQISQTANQLPAVNGANVNIDTLQLRDVQILYPEKDAPTVFGNGGPFELA 86 Query 81 LVAVNQSPDVSDRLVGITSDIGSVT-VAGD---ARLPASGM-LFVGTPDGQIVAPGPLPS 135 V N RL I + GSV V G AR+ A G L GTP G + Sbjct 87 FVVANSDQTAYYRLKEIKPEKGSVEFVEGSDSAARVIAPGQALSSGTPVGSV-------R 139 Query 136 NQAAKATVNLTKP---IANGLTYNFTFKFEK---------AGQGSVMVPISAG 176 + K T LT +A GLT + TF FEK AG+ +V P+ AG Sbjct 140 DSEKKVTAELTNAGDTVAAGLTTDLTFVFEKREGNGSWVPAGETTVQTPVDAG 192 >gi|226363786|ref|YP_002781568.1| hypothetical protein ROP_43760 [Rhodococcus opacus B4] gi|226242275|dbj|BAH52623.1| hypothetical protein [Rhodococcus opacus B4] Length=210 Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 52/165 (32%), Positives = 80/165 (49%), Gaps = 15/165 (9%) Query 30 CGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAVQTSDF-IQPGKAVDLVLVAVNQSP 88 C AGQI+QT++Q AVNGN ++ LR++ + ++++ ++PG L A+N + Sbjct 28 CSAGQITQTSSQVAAVNGNSADAGSIALRNVHVVYPNSAEYSLEPGGNAVLAFTAINNNE 87 Query 89 DVSDRLVGITSDIG-SVTV---AGDARLPASGMLFVGTP----------DGQIVAPGPLP 134 D D+L I++D SVT+ AG + L G P P Sbjct 88 DTPDKLTRISTDFAQSVTLGESAGGLEIDPQSALVAGLPGEDAEASADAAAATDESADAP 147 Query 135 SNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPISAGLAT 179 ++ NL + + GLT+ TF FEKAG +V VP+ AG T Sbjct 148 TDVVLVTLNNLKEGVRPGLTFPVTFAFEKAGDVTVSVPVDAGHET 192 >gi|54022397|ref|YP_116639.1| hypothetical protein nfa4330 [Nocardia farcinica IFM 10152] gi|54013905|dbj|BAD55275.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=232 Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 74/213 (35%), Positives = 93/213 (44%), Gaps = 36/213 (16%) Query 1 VNRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDI 60 V N RL M T A A A ALSGC AGQISQTANQ A+NGN + + LR++ Sbjct 10 VTALNSRL----MVTVAAFAAGAALALSGCSAGQISQTANQASAINGNFADVEEISLRNV 65 Query 61 RIQ-AVQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIGSVTV---AGDARLP-AS 115 I + Q GKA+ L L VN S +D L IT+D+G V + AG +R Sbjct 66 HIVFPGEGYTNTQGGKAL-LALSVVNNSETTADELTSITTDLGQVEITPPAGKSRFEIGP 124 Query 116 GMLFVGTP------------DGQ---------IVAPGPLPSNQAAKATV----NLTKPIA 150 + V P DG P A+ + LTK I Sbjct 125 QQMVVAAPAQTGASAAGEHGDGHGSATTSPAPTTTAQPAADQDEAEHALIEITGLTKDIT 184 Query 151 NGLTYNFTFKFEKAGQGSVMVPISAGL-ATPHE 182 GL Y +F F++ G V VP+ AG A HE Sbjct 185 PGLAYTVSFNFKENGTVQVQVPVDAGTEAERHE 217 >gi|325000161|ref|ZP_08121273.1| hypothetical protein PseP1_15403 [Pseudonocardia sp. P1] Length=232 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/178 (39%), Positives = 90/178 (51%), Gaps = 18/178 (10%) Query 2 NRCNIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDIR 61 NR +R LAG+ VA LL LSGCG GQ+SQTA Q A NG ++ +V LRD++ Sbjct 4 NRRPLRT-LAGVAGAVALSGLL---LSGCGTGQLSQTAQQVAATNGLNASVGDVDLRDVQ 59 Query 62 IQAVQ----TSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSD-IGSVTVAGDARLPAS- 115 I Q + G A + +N +DRLV ++S GSV V GD L Sbjct 60 IGYPQAPASEAALYARGTAAPVRATLINTG-ATADRLVSVSSPAAGSVAVGGDRVLAQDV 118 Query 116 GMLFVGTPDGQIVAPGPLPSNQAAKATVN-LTKPIANGLTYNFTFKFEKAGQGSVMVP 172 ++ VGT + Q A PL + T+ L +PIA G TF FE+AG +V VP Sbjct 119 ALVAVGTSELQPTASRPL------QLTLEGLRQPIAAGGDVPMTFVFERAGSITVTVP 170 >gi|296138334|ref|YP_003645577.1| hypothetical protein Tpau_0600 [Tsukamurella paurometabola DSM 20162] gi|296026468|gb|ADG77238.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=196 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 57/161 (36%), Positives = 77/161 (48%), Gaps = 24/161 (14%) Query 26 ALSGCGAGQISQTANQKPAVNG--NRLTINNVLLRDIRIQAVQTSDFIQPGKAVDLVLVA 83 ++S CGAGQISQTANQ A+NG + +L D+ + T+ GK L V Sbjct 27 SVSACGAGQISQTANQVAAINGANHNFVDQKKVLSDVHVLYPVTAG---QGK---LAFVL 80 Query 84 VNQSPDVS---DRLVGITSDIG-SVTVAGDARLPASGMLFVGTPDGQIVAPGPLPSNQAA 139 N PD DRLV IT G + T++GD LPA G L+ P G + A Sbjct 81 SNIDPDNKNGGDRLVAITDQNGRNATISGDTSLPAGGSLYGAAPQGS--------DDNAD 132 Query 140 KATVNLTKPIAN----GLTYNFTFKFEKAGQGSVMVPISAG 176 + +T P+ GLT TF +K+G + VP+ AG Sbjct 133 LTRLKVTLPVDGSWRPGLTNELTFHLQKSGALKIAVPLDAG 173 >gi|134097050|ref|YP_001102711.1| hypothetical protein SACE_0437 [Saccharopolyspora erythraea NRRL 2338] gi|291007009|ref|ZP_06564982.1| hypothetical protein SeryN2_21018 [Saccharopolyspora erythraea NRRL 2338] gi|133909673|emb|CAL99785.1| hypothetical protein SACE_0437 [Saccharopolyspora erythraea NRRL 2338] Length=204 Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 54/175 (31%), Positives = 76/175 (44%), Gaps = 28/175 (16%) Query 26 ALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAVQTSDFIQPGKAVDLVLVAVN 85 AL GC AGQ+++T Q AV+G T+ + +RD ++ + + G + L LV N Sbjct 13 ALGGCSAGQVTETDTQVAAVSGGNGTVKEIAVRDAQMTFPEHGSLYRAGSSAPLKLVLSN 72 Query 86 QSPDVSDRLVGITSDIGS-VTVAGDARLPASGMLFV------------------------ 120 V DRLV ++S + +AG LPA L Sbjct 73 DGA-VDDRLVQVSSTYAANAEIAGTTDLPAGTALHADGAQQESGHATTQHEPTSSNAPTA 131 Query 121 -GTPDGQIVAPGPLPSNQAAKATVN-LTKPIANGLTYNFTFKFEKAGQGSVMVPI 173 P Q A G + + T+N LT+ I G+T TF FEKAG +V VPI Sbjct 132 SNAPTAQPSAQGGPSDQREIRITLNGLTQDITPGVTIPVTFVFEKAGSVTVQVPI 186 >gi|262200965|ref|YP_003272173.1| hypothetical protein Gbro_0969 [Gordonia bronchialis DSM 43247] gi|262084312|gb|ACY20280.1| hypothetical protein Gbro_0969 [Gordonia bronchialis DSM 43247] Length=228 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/169 (35%), Positives = 82/169 (49%), Gaps = 28/169 (16%) Query 28 SGCGAGQISQTANQKPAVNGNRLTINNVLLRDIRI--QAVQTSDFIQPGKAVDLVLVAVN 85 +GCGAGQISQTANQ PAVNG ++ LR+++I + + G L V Sbjct 19 TGCGAGQISQTANQLPAVNGANANYLSLTLRNVQIVYPTDKADEVFGAGGPFKLSFVIGT 78 Query 86 QSPDVSDRLVGITS-DIGSVTVAGDARLPASGMLFVGTPDGQIVAPGPLP-SNQAAK--- 140 SP RL I + G+VT+ +P+SG TPD ++ + P+ N+A + Sbjct 79 TSPTDYFRLKEIKAPSGGTVTL-----VPSSGPQLEITPDRELRSGTPVGLENEAVERAT 133 Query 141 ------ATVN-LTKPIANGLTYNFTFKFEK---------AGQGSVMVPI 173 AT+N K +A GLT N F FE AG+ SV+ P+ Sbjct 134 EENRIDATLNGAGKSVAAGLTTNLVFVFEHKQADGSWRDAGETSVLTPV 182 >gi|302530714|ref|ZP_07283056.1| predicted protein [Streptomyces sp. AA4] gi|302439609|gb|EFL11425.1| predicted protein [Streptomyces sp. AA4] Length=206 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 3/100 (3%) Query 27 LSGCGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAVQTSDFIQPGKAVDLVLVAVNQ 86 L+GCGAGQI+QT Q+PAVNG ++LR+ +Q G L L VNQ Sbjct 2 LAGCGAGQITQTDTQQPAVNGTYAQAKTIMLRNAAVQYPAQGPGYPAGSPAPLTLTIVNQ 61 Query 87 SPDVSDRLVGITSD--IGSVTVAGDARLPASGMLFVGTPD 124 D+LV +TS+ G ++GD + A L +G D Sbjct 62 G-QKDDKLVSVTSEGASGPAQISGDTVIVAGHSLVIGPAD 100 >gi|8439561|gb|AAF74991.1|AF143398_1 exported protein 996A010 [Mycobacterium avium] Length=41 Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 27/39 (70%), Positives = 32/39 (83%), Gaps = 0/39 (0%) Query 24 AAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDIRI 62 A LSGCGAGQ+SQ A Q+PA+ GN++T NNV LRDIRI Sbjct 3 AVLLSGCGAGQVSQMAVQEPAIFGNKVTFNNVALRDIRI 41 >gi|331697268|ref|YP_004333507.1| hypothetical protein Psed_3472 [Pseudonocardia dioxanivorans CB1190] gi|326951957|gb|AEA25654.1| protein of unknown function (DUF461) [Pseudonocardia dioxanivorans CB1190] Length=152 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/162 (28%), Positives = 77/162 (48%), Gaps = 19/162 (11%) Query 23 LAAALSGCGAGQISQTANQKPAVNGNRLTIN-NVLLRDIRIQAVQTSDFIQPGKAVDLVL 81 + +L+GCGAGQ++QT+ Q+ AV+G + + LRD++ P ++ VL Sbjct 1 MTGSLTGCGAGQLAQTSEQQSAVSGASGDVGPGIALRDVKFPYPADPTGRYPVRSAVAVL 60 Query 82 VAVNQSPDVSDRLVGITSDIGS-VTVAGDARLPASGMLFVGTPDGQIVAPGPLPSNQAAK 140 + +D LV +TS + G ++P PD +V GP P+ A+ Sbjct 61 AVIINHGSHADELVAVTSPYADPAQMVGTTQIP---------PDRNLVC-GPDPAQPASP 110 Query 141 ATVNLTKPI-------ANGLTYNFTFKFEKAGQGSVMVPISA 175 V + + GL TF+F +AG+ +++VP++A Sbjct 111 LIVGSVRVVLVTNTVLRAGLDTPVTFRFRQAGEVTLLVPMAA 152 >gi|258651109|ref|YP_003200265.1| hypothetical protein Namu_0865 [Nakamurella multipartita DSM 44233] gi|258554334|gb|ACV77276.1| hypothetical protein Namu_0865 [Nakamurella multipartita DSM 44233] Length=200 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/162 (31%), Positives = 77/162 (48%), Gaps = 21/162 (12%) Query 18 ASIALLAA---ALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAVQTSDFIQPG 74 A +AL AA A+SGC AGQ SQTA+Q A++G T+ ++ + + R+ + D+ P Sbjct 15 AGLALFAAMTLAVSGCAAGQYSQTADQVAAIDGANGTVGDIAVLNARLAPTEREDY--PA 72 Query 75 KAVDLVLVAVNQSPDVSDRLVGI-TSDIGSVTVAGDARLPASGML-FVGTPDG-QIVAPG 131 A VL+ ++ + +D L + TS SV + GDA LP + F G +++ G Sbjct 73 GANARVLLYISNNGLNADTLESVTTSAANSVRITGDATLPPQKLSDFASDSSGTEVIVTG 132 Query 132 PLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPI 173 + G++ TF F AG + VPI Sbjct 133 -------------FVQDQPYGVSIPMTFSFANAGTVDLNVPI 161 >gi|284990816|ref|YP_003409370.1| hypothetical protein Gobs_2320 [Geodermatophilus obscurus DSM 43160] gi|284064061|gb|ADB74999.1| protein of unknown function DUF461 [Geodermatophilus obscurus DSM 43160] Length=163 Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 55/179 (31%), Positives = 82/179 (46%), Gaps = 31/179 (17%) Query 8 LRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAVQT 67 +R + W A++ LL L GCGAGQ ++TA + P V G T+ V L D+ + A Sbjct 1 MRHTPLPAW-AAVGLLV--LGGCGAGQEAETAQETPDVAGVDGTVGEVSLDDVFLDA--- 54 Query 68 SDFIQPGKAVDLVLVAVNQSPDVSDRLVGITS---------DIGSVTVAGDARLPASGML 118 D + G AV L V N + + DRLVG+++ D A LPA G + Sbjct 55 EDTVGAGAAVPLRGVLTNDA-EQPDRLVGVSTPAAESVQLLDESGAPSADGIELPAGGQV 113 Query 119 FVGTPDGQIVAPGPLPSNQAAKATVN-LTKPIANGLTYNFTFKFEKAGQGSVMVPISAG 176 Q V ++A + + +T PI T TF F AG+ ++ V ++AG Sbjct 114 -------QAV-------SEAVRMQLEQVTAPIDPTDTVPVTFTFATAGEVTLDVLVTAG 158 >gi|334564019|ref|ZP_08517010.1| putative secreted protein [Corynebacterium bovis DSM 20582] Length=192 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/92 (42%), Positives = 48/92 (53%), Gaps = 8/92 (8%) Query 24 AAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAVQTSDFIQPGKAVDLVLVA 83 A A++ C AGQISQTANQ PAV+G +RDI + +Q + L A Sbjct 26 ALAITACSAGQISQTANQVPAVDGVYANPPGTPVRDITVS-------LQEDGSTALKFTA 78 Query 84 VNQSPDVSD-RLVGITSDIGSVTVAGDARLPA 114 VN++ D SD L GIT D V + GD L A Sbjct 79 VNKTLDDSDVTLRGITVDGRKVELDGDTSLGA 110 >gi|340793470|ref|YP_004758933.1| hypothetical protein CVAR_3062 [Corynebacterium variabile DSM 44702] gi|340533380|gb|AEK35860.1| putative secreted protein [Corynebacterium variabile DSM 44702] Length=206 Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 28/64 (44%), Positives = 37/64 (58%), Gaps = 7/64 (10%) Query 24 AAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAVQTSDFIQPGKAVDLVLVA 83 A AL+ CGAGQISQTANQ AVNG + + ++RD+ + IQ +V L A Sbjct 26 ALALTACGAGQISQTANQVAAVNGTNGEVGDAVVRDVSL-------VIQEDNSVALKFNA 78 Query 84 VNQS 87 NQ+ Sbjct 79 SNQA 82 >gi|269124962|ref|YP_003298332.1| hypothetical protein Tcur_0701 [Thermomonospora curvata DSM 43183] gi|268309920|gb|ACY96294.1| hypothetical protein Tcur_0701 [Thermomonospora curvata DSM 43183] Length=222 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/170 (30%), Positives = 74/170 (44%), Gaps = 23/170 (13%) Query 17 VASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINN------VLLRDIRIQAVQTSDF 70 VA LA LSGC AG QTA G +++ + +R++ + Sbjct 13 VAGAIALAPVLSGCAAGHTPQTAMPTQLTEGVNVSVPQDAKVAQIDIRNMFVLGPAPGST 72 Query 71 IQPGKAVDLVLVAVNQSPDVSDRLVGITSD-IGSVTVAGDA-RLPASGMLFVGTPDG--- 125 G AV L +NQ +DRLV ++S +AG LPA+G P+G Sbjct 73 AAAGSAVPLYATLINQVQGKADRLVEVSSPAFRQAQIAGGGIALPAAG------PEGGTA 126 Query 126 -QIVAPGPLPSNQAAKATVN-LTKPIANGLTYNFTFKFEKAGQGSVMVPI 173 +++A G Q + LT P+ G T T +FE+AG +V VP+ Sbjct 127 VRLIAEG----QQMPPVVLQGLTSPLIGGETIRLTLRFEQAGSITVPVPV 172 >gi|237784958|ref|YP_002905663.1| hypothetical protein ckrop_0341 [Corynebacterium kroppenstedtii DSM 44385] gi|237757870|gb|ACR17120.1| putative secreted protein [Corynebacterium kroppenstedtii DSM 44385] Length=208 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/86 (44%), Positives = 48/86 (56%), Gaps = 9/86 (10%) Query 30 CGAGQISQTANQKPAVNGN--RLTINNVLLRDIRIQAVQTSDFIQPGKAVDLVLVAVNQS 87 CGAGQISQTANQ PAV+G NN+ LRD+ +Q +T D G AV + V+ Sbjct 26 CGAGQISQTANQVPAVDGGAANAEDNNITLRDVTVQP-KTDDH---GGAVAFAISNVD-- 79 Query 88 PDVSDR-LVGITSDIGSVTVAGDARL 112 P ++R L I+ D V V G+ L Sbjct 80 PTNTERQLQRISVDGQEVKVDGNKDL 105 >gi|340532168|gb|AEK47373.1| hypothetical protein RAM_44530 [Amycolatopsis mediterranei S699] Length=222 Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust. Identities = 32/92 (35%), Positives = 49/92 (54%), Gaps = 3/92 (3%) Query 34 QISQTANQKPAVNGNRLTINNVLLRDIRIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDR 93 QI+QTA+Q+PAVNG + + LR+ +Q ++ G L L VN+ D Sbjct 22 QITQTASQQPAVNGTHAQVKTIDLRNAAVQYPKSGPGYPAGATPALTLTIVNRG-GQDDS 80 Query 94 LVGITSDIGS-VTVAGDARLPASGMLFVGTPD 124 LV +T++ G+ T+AG + A L +G PD Sbjct 81 LVSVTTEDGTQATIAGSKTVVAMHSLVIG-PD 111 >gi|300790483|ref|YP_003770774.1| hypothetical protein AMED_8677 [Amycolatopsis mediterranei U32] gi|299799997|gb|ADJ50372.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length=229 Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust. Identities = 31/92 (34%), Positives = 48/92 (53%), Gaps = 2/92 (2%) Query 34 QISQTANQKPAVNGNRLTINNVLLRDIRIQAVQTSDFIQPGKAVDLVLVAVNQSPDVSDR 93 QI+QTA+Q+PAVNG + + LR+ +Q ++ G L L VN+ D Sbjct 29 QITQTASQQPAVNGTHAQVKTIDLRNAAVQYPKSGPGYPAGATPALTLTIVNRG-GQDDS 87 Query 94 LVGITSDIGS-VTVAGDARLPASGMLFVGTPD 124 LV +T++ G+ T+AG + A L +G D Sbjct 88 LVSVTTEDGTQATIAGSKTVVAMHSLVIGPDD 119 >gi|227505964|ref|ZP_03936013.1| secreted protein [Corynebacterium striatum ATCC 6940] gi|227197486|gb|EEI77534.1| secreted protein [Corynebacterium striatum ATCC 6940] Length=197 Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust. Identities = 33/93 (36%), Positives = 49/93 (53%), Gaps = 16/93 (17%) Query 21 ALLAAALSGCGAGQISQTANQKPAVNGNRLTINN--VLLRDIRIQAVQTSDFIQPGK-AV 77 AL A AL+ C AG ++QT+++ AV+G+ + V +RD+ IQ ++P Sbjct 18 ALSALALASCSAGHVTQTSDKVAAVDGSSAATEDGAVAVRDVTIQ-------VEPDSGET 70 Query 78 DLVLVAVNQSPDVSD------RLVGITSDIGSV 104 L VAVNQ +VSD + G D+GSV Sbjct 71 SLKFVAVNQGYEVSDITLESVSVDGQDVDLGSV 103 >gi|257057464|ref|YP_003135296.1| hypothetical protein Svir_35080 [Saccharomonospora viridis DSM 43017] gi|256587336|gb|ACU98469.1| Protein of unknown function (DUF461) [Saccharomonospora viridis DSM 43017] Length=192 Score = 42.7 bits (99), Expect = 0.022, Method: Compositional matrix adjust. Identities = 49/189 (26%), Positives = 79/189 (42%), Gaps = 25/189 (13%) Query 6 IRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQAV 65 ++ R+ G ALL A GC AGQI+QT Q A+NG + ++ +++ I Sbjct 1 MKRRMVGSAVVAVGSALLVA---GCAAGQITQTDTQVAAINGASTQVGSIAIQNAEIAYP 57 Query 66 Q-----------TSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSDIG-SVTVAGDARLP 113 + S P + V+ +N+ + D LV +D +VT+ G +P Sbjct 58 EGPTGNTSGGAGGSGVYPPNSDAEAVIWLINEGGE-DDELVSARTDAARNVTIEGSRVVP 116 Query 114 ASGMLFVGTPDGQIVAPGPLPSNQAAKATVNLTKPIANGLTYNFTFKFEKAGQGSVMVPI 173 A ML + +P+ Q G N LT+ + G T F +AG + +P+ Sbjct 117 AQRMLVL-SPEKQ----GTNNPNNGQLILEGLTEQLRPGQLVEITLTFREAGPVTFEMPV 171 Query 174 SAGLATPHE 182 A P E Sbjct 172 ----AVPEE 176 >gi|336324773|ref|YP_004604739.1| hypothetical protein CRES_0212 [Corynebacterium resistens DSM 45100] gi|336100755|gb|AEI08575.1| hypothetical protein CRES_0212 [Corynebacterium resistens DSM 45100] Length=198 Score = 42.0 bits (97), Expect = 0.040, Method: Compositional matrix adjust. Identities = 25/52 (49%), Positives = 34/52 (66%), Gaps = 2/52 (3%) Query 13 MTTWVASIALLAA-ALSGCGAGQISQTANQKPAVNG-NRLTINNVLLRDIRI 62 M T +A++A + AL+ CGAG ISQTANQ PAVNG + + LRD+ + Sbjct 9 MRTALAAVAAGSTLALTACGAGHISQTANQVPAVNGVSAQAGKQISLRDVAL 60 >gi|284989241|ref|YP_003407795.1| hypothetical protein Gobs_0646 [Geodermatophilus obscurus DSM 43160] gi|284062486|gb|ADB73424.1| hypothetical protein Gobs_0646 [Geodermatophilus obscurus DSM 43160] Length=269 Score = 41.6 bits (96), Expect = 0.045, Method: Compositional matrix adjust. Identities = 45/143 (32%), Positives = 62/143 (44%), Gaps = 15/143 (10%) Query 5 NIRLRLAGMTTWVASIALLAAALSGCGAGQISQTANQKPAVNGNRLTINNVLLRDIRIQA 64 N LR A M ++ L ALS C AGQ+ QTA Q G + ++++R I + A Sbjct 2 NRALRAATM----GALLLSPVALSACSAGQVPQTATQNRDKVGPEAAVGDLVMRQITL-A 56 Query 65 VQTSDFIQPGKAVDLVLVAVNQSPDVSDRLVGITSD-IGSVTVAGDAR----LPASGMLF 119 PG +L + VN + +D LVGI + V V+G A +P S Sbjct 57 YPQDGLYAPGDDAELRMAIVNSDTE-ADTLVGIEGEAFDGVVVSGQATASPAVPGSPSAA 115 Query 120 VGTPDGQIV----APGPLPSNQA 138 G+P V APG P A Sbjct 116 PGSPSAAPVTTPAAPGTTPQTTA 138 Lambda K H 0.317 0.132 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 164464225230 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40