BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3587c Length=264 Score E Sequences producing significant alignments: (Bits) Value gi|15843200|ref|NP_338237.1| hypothetical protein MT3693 [Mycoba... 518 5e-145 gi|15610723|ref|NP_218104.1| hypothetical protein Rv3587c [Mycob... 517 6e-145 gi|289441017|ref|ZP_06430761.1| conserved hypothetical protein [... 508 4e-142 gi|121639507|ref|YP_979731.1| hypothetical protein BCG_3652c [My... 440 1e-121 gi|183985055|ref|YP_001853346.1| hypothetical protein MMAR_5087 ... 408 3e-112 gi|118619341|ref|YP_907673.1| hypothetical protein MUL_4163 [Myc... 408 4e-112 gi|254823231|ref|ZP_05228232.1| hypothetical protein MintA_25099... 394 6e-108 gi|240172173|ref|ZP_04750832.1| hypothetical protein MkanA1_2285... 394 8e-108 gi|342862425|ref|ZP_08719065.1| hypothetical protein MCOL_26158 ... 367 1e-99 gi|254773524|ref|ZP_05215040.1| hypothetical protein MaviaA2_024... 362 2e-98 gi|15828029|ref|NP_302292.1| hypothetical protein ML1918 [Mycoba... 362 4e-98 gi|118463517|ref|YP_879846.1| hypothetical protein MAV_0566 [Myc... 361 8e-98 gi|41406569|ref|NP_959405.1| hypothetical protein MAP0471 [Mycob... 361 8e-98 gi|336458465|gb|EGO37438.1| hypothetical protein MAPs_12530 [Myc... 359 3e-97 gi|296166643|ref|ZP_06849069.1| conserved hypothetical protein [... 322 3e-86 gi|289763766|ref|ZP_06523144.1| LOW QUALITY PROTEIN: conserved m... 309 3e-82 gi|333992519|ref|YP_004525133.1| hypothetical protein JDM601_387... 286 2e-75 gi|120406292|ref|YP_956121.1| hypothetical protein Mvan_5344 [My... 284 8e-75 gi|126437694|ref|YP_001073385.1| hypothetical protein Mjls_5130 ... 283 2e-74 gi|108801707|ref|YP_641904.1| hypothetical protein Mmcs_4744 [My... 282 3e-74 gi|145222032|ref|YP_001132710.1| hypothetical protein Mflv_1440 ... 275 3e-72 gi|118471796|ref|YP_890303.1| hypothetical protein MSMEG_6081 [M... 275 4e-72 gi|169627664|ref|YP_001701313.1| hypothetical protein MAB_0561 [... 258 6e-67 gi|312138092|ref|YP_004005428.1| hypothetical protein REQ_06250 ... 162 5e-38 gi|325675004|ref|ZP_08154691.1| hypothetical protein HMPREF0724_... 155 7e-36 gi|111021422|ref|YP_704394.1| hypothetical protein RHA1_ro04450 ... 124 2e-26 gi|296138331|ref|YP_003645574.1| hypothetical protein Tpau_0597 ... 123 3e-26 gi|333918026|ref|YP_004491607.1| hypothetical protein AS9A_0348 ... 122 6e-26 gi|226363777|ref|YP_002781559.1| hypothetical protein ROP_43670 ... 120 3e-25 gi|262200961|ref|YP_003272169.1| hypothetical protein Gbro_0965 ... 118 1e-24 gi|229494298|ref|ZP_04388061.1| conserved hypothetical protein [... 115 1e-23 gi|54022395|ref|YP_116637.1| hypothetical protein nfa4310 [Nocar... 113 3e-23 gi|326383084|ref|ZP_08204773.1| hypothetical protein SCNU_09106 ... 111 9e-23 gi|226304170|ref|YP_002764128.1| hypothetical protein RER_06810 ... 108 9e-22 gi|296392876|ref|YP_003657760.1| hypothetical protein Srot_0442 ... 105 7e-21 gi|317507821|ref|ZP_07965522.1| hypothetical protein HMPREF9336_... 105 8e-21 gi|331699822|ref|YP_004336061.1| hypothetical protein Psed_6105 ... 104 2e-20 gi|343925915|ref|ZP_08765430.1| hypothetical protein GOALK_050_0... 102 4e-20 gi|255325862|ref|ZP_05366954.1| conserved hypothetical protein [... 93.6 3e-17 gi|324997776|ref|ZP_08118888.1| hypothetical protein PseP1_03370... 89.7 3e-16 gi|256374500|ref|YP_003098160.1| hypothetical protein Amir_0345 ... 82.8 4e-14 gi|311740172|ref|ZP_07714004.1| conserved hypothetical protein [... 81.3 1e-13 gi|25029082|ref|NP_739136.1| hypothetical protein CE2526 [Coryne... 78.2 1e-12 gi|308175915|ref|YP_003915321.1| hypothetical protein AARI_01110... 76.3 4e-12 gi|227547930|ref|ZP_03977979.1| conserved hypothetical protein [... 75.9 6e-12 gi|227502082|ref|ZP_03932131.1| conserved hypothetical protein [... 75.5 7e-12 gi|284989238|ref|YP_003407792.1| MucR family transcriptional reg... 73.6 3e-11 gi|227834041|ref|YP_002835748.1| hypothetical protein cauri_2219... 72.8 5e-11 gi|306836891|ref|ZP_07469846.1| conserved hypothetical protein [... 72.8 5e-11 gi|134097047|ref|YP_001102708.1| hypothetical protein SACE_0434 ... 72.8 5e-11 >gi|15843200|ref|NP_338237.1| hypothetical protein MT3693 [Mycobacterium tuberculosis CDC1551] gi|148824793|ref|YP_001289547.1| hypothetical protein TBFG_13620 [Mycobacterium tuberculosis F11] gi|167967109|ref|ZP_02549386.1| hypothetical protein MtubH3_03292 [Mycobacterium tuberculosis H37Ra] 21 more sequence titles Length=272 Score = 518 bits (1333), Expect = 5e-145, Method: Compositional matrix adjust. Identities = 264/264 (100%), Positives = 264/264 (100%), Gaps = 0/264 (0%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS Sbjct 9 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 68 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 120 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG Sbjct 69 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 128 Query 121 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 180 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET Sbjct 129 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 188 Query 181 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQPP 240 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQPP Sbjct 189 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQPP 248 Query 241 PPPGPVPAPGPAQAPPPESPAQGG 264 PPPGPVPAPGPAQAPPPESPAQGG Sbjct 249 PPPGPVPAPGPAQAPPPESPAQGG 272 >gi|15610723|ref|NP_218104.1| hypothetical protein Rv3587c [Mycobacterium tuberculosis H37Rv] gi|31794764|ref|NP_857257.1| hypothetical protein Mb3618c [Mycobacterium bovis AF2122/97] gi|148663451|ref|YP_001284974.1| hypothetical protein MRA_3626 [Mycobacterium tuberculosis H37Ra] 43 more sequence titles Length=264 Score = 517 bits (1332), Expect = 6e-145, Method: Compositional matrix adjust. Identities = 263/264 (99%), Positives = 264/264 (100%), Gaps = 0/264 (0%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 +LDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS Sbjct 1 MLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 120 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG Sbjct 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 120 Query 121 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 180 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET Sbjct 121 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 180 Query 181 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQPP 240 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQPP Sbjct 181 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQPP 240 Query 241 PPPGPVPAPGPAQAPPPESPAQGG 264 PPPGPVPAPGPAQAPPPESPAQGG Sbjct 241 PPPGPVPAPGPAQAPPPESPAQGG 264 >gi|289441017|ref|ZP_06430761.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289413936|gb|EFD11176.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] Length=267 Score = 508 bits (1308), Expect = 4e-142, Method: Compositional matrix adjust. Identities = 259/259 (100%), Positives = 259/259 (100%), Gaps = 0/259 (0%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS Sbjct 9 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 68 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 120 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG Sbjct 69 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 128 Query 121 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 180 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET Sbjct 129 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 188 Query 181 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQPP 240 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQPP Sbjct 189 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQPP 248 Query 241 PPPGPVPAPGPAQAPPPES 259 PPPGPVPAPGPAQAPPPES Sbjct 249 PPPGPVPAPGPAQAPPPES 267 >gi|121639507|ref|YP_979731.1| hypothetical protein BCG_3652c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224992004|ref|YP_002646693.1| hypothetical protein JTY_3653 [Mycobacterium bovis BCG str. Tokyo 172] gi|121495155|emb|CAL73641.1| Probable conserved membrane protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224775119|dbj|BAH27925.1| hypothetical protein JTY_3653 [Mycobacterium bovis BCG str. Tokyo 172] gi|341603528|emb|CCC66209.1| probable conserved membrane protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=263 Score = 440 bits (1131), Expect = 1e-121, Method: Compositional matrix adjust. Identities = 237/238 (99%), Positives = 238/238 (100%), Gaps = 0/238 (0%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 +LDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS Sbjct 1 MLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 120 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG Sbjct 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 120 Query 121 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 180 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET Sbjct 121 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 180 Query 181 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQ 238 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQ Sbjct 181 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQ 238 >gi|183985055|ref|YP_001853346.1| hypothetical protein MMAR_5087 [Mycobacterium marinum M] gi|183178381|gb|ACC43491.1| conserved membrane protein [Mycobacterium marinum M] Length=273 Score = 408 bits (1049), Expect = 3e-112, Method: Compositional matrix adjust. Identities = 220/237 (93%), Positives = 228/237 (97%), Gaps = 0/237 (0%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 VLDLEPRGPLPTEIYWRRRGLALGIAVVV+G+AVA VIAFV S+AGAKP +ADKPA AQ Sbjct 9 VLDLEPRGPLPTEIYWRRRGLALGIAVVVIGVAVAAVIAFVGSNAGAKPANADKPAGAQD 68 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 120 HPGS APQAPQPAGQTEGNA APPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG Sbjct 69 HPGSSAPQAPQPAGQTEGNAPGAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 128 Query 121 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 180 LTNAPQYY+GDQPKFTMVVTNIGLV+CKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET Sbjct 129 LTNAPQYYIGDQPKFTMVVTNIGLVACKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 188 Query 181 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILN 237 LVKTF+PGEQVTTAVTWTGMGSAP+CPLPRPAIGPGTYNLVVQLGNLRS PVPFILN Sbjct 189 LVKTFAPGEQVTTAVTWTGMGSAPKCPLPRPAIGPGTYNLVVQLGNLRSQPVPFILN 245 >gi|118619341|ref|YP_907673.1| hypothetical protein MUL_4163 [Mycobacterium ulcerans Agy99] gi|118571451|gb|ABL06202.1| conserved membrane protein [Mycobacterium ulcerans Agy99] Length=273 Score = 408 bits (1049), Expect = 4e-112, Method: Compositional matrix adjust. Identities = 220/237 (93%), Positives = 227/237 (96%), Gaps = 0/237 (0%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 VLDLEPRGPLPTEIYWRRRGLALGIAVVV+G+AVA VIAFV S AGAKP +ADKPA AQ Sbjct 9 VLDLEPRGPLPTEIYWRRRGLALGIAVVVIGVAVAAVIAFVGSHAGAKPANADKPAGAQD 68 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 120 HPGS APQAPQPAGQTEGNA APPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG Sbjct 69 HPGSSAPQAPQPAGQTEGNAPGAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 128 Query 121 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 180 LTNAPQYY+GDQPKFTMVVTNIGLV+CKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET Sbjct 129 LTNAPQYYIGDQPKFTMVVTNIGLVACKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 188 Query 181 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILN 237 LVKTF+PGEQVTTAVTWTGMGSAP+CPLPRPAIGPGTYNLVVQLGNLRS PVPFILN Sbjct 189 LVKTFAPGEQVTTAVTWTGMGSAPKCPLPRPAIGPGTYNLVVQLGNLRSQPVPFILN 245 >gi|254823231|ref|ZP_05228232.1| hypothetical protein MintA_25099 [Mycobacterium intracellulare ATCC 13950] Length=256 Score = 394 bits (1013), Expect = 6e-108, Method: Compositional matrix adjust. Identities = 207/238 (87%), Positives = 219/238 (93%), Gaps = 0/238 (0%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 VLDLEPRGPLPTEIYWRRRGLA+GIAVVV+GI A VIAF+ S+GAKP +ADKP SAQS Sbjct 9 VLDLEPRGPLPTEIYWRRRGLAVGIAVVVIGIVAATVIAFMGHSSGAKPTTADKPNSAQS 68 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 120 PGSPAPQAP PAG A P QGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG Sbjct 69 KPGSPAPQAPPPAGPESPAPGAPPAQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 128 Query 121 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 180 LTNAPQY++GDQPKFTMVVTNIGLV+CKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET Sbjct 129 LTNAPQYFIGDQPKFTMVVTNIGLVACKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 188 Query 181 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQ 238 L+KTF+PGEQVTTAVTWTGMGSAP CPLPRPAIGPGTYNLVVQLGNLRS+PVPFI+NQ Sbjct 189 LIKTFTPGEQVTTAVTWTGMGSAPHCPLPRPAIGPGTYNLVVQLGNLRSMPVPFIMNQ 246 >gi|240172173|ref|ZP_04750832.1| hypothetical protein MkanA1_22859 [Mycobacterium kansasii ATCC 12478] Length=272 Score = 394 bits (1012), Expect = 8e-108, Method: Compositional matrix adjust. Identities = 213/237 (90%), Positives = 225/237 (95%), Gaps = 1/237 (0%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 VLDLEPRGPLPTEIYWRRRGLALGIAVVV+GIAVA V+AFV ++AGAKPV+A+KP SAQS Sbjct 9 VLDLEPRGPLPTEIYWRRRGLALGIAVVVIGIAVAAVVAFVGNTAGAKPVNAEKPGSAQS 68 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 120 HPGS AP+APQPAGQ+ N AAP QGQNPE PTPTAAVQPPPVLKEGDDCPDSTLAVKG Sbjct 69 HPGSNAPEAPQPAGQSAANTPAAP-QGQNPEMPTPTAAVQPPPVLKEGDDCPDSTLAVKG 127 Query 121 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 180 LTNAPQYY+GDQPKFTMVVTNIGLV+CKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET Sbjct 128 LTNAPQYYIGDQPKFTMVVTNIGLVACKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 187 Query 181 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILN 237 LVK F+PGEQVTTAVTWTGMGSAP CPLPRPAIGPGTYNLVVQLGNLRSLPVPF+LN Sbjct 188 LVKMFTPGEQVTTAVTWTGMGSAPHCPLPRPAIGPGTYNLVVQLGNLRSLPVPFVLN 244 >gi|342862425|ref|ZP_08719065.1| hypothetical protein MCOL_26158 [Mycobacterium colombiense CECT 3035] gi|342130096|gb|EGT83430.1| hypothetical protein MCOL_26158 [Mycobacterium colombiense CECT 3035] Length=277 Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 202/237 (86%), Positives = 217/237 (92%), Gaps = 0/237 (0%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 VLDLEPRGPLPTEIYWRRRGLA+GIAVVV+GI AIVIAF+ S GAKP +ADK ++A + Sbjct 9 VLDLEPRGPLPTEIYWRRRGLAIGIAVVVIGIVAAIVIAFMGHSTGAKPANADKASAAAN 68 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 120 PGSPAPQAP P G AA P QGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG Sbjct 69 KPGSPAPQAPPPPGPEGPAPAAPPAQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 128 Query 121 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 180 LTNAPQY++GDQPKFTMVVTNIGLV+CKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET Sbjct 129 LTNAPQYFIGDQPKFTMVVTNIGLVACKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 188 Query 181 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILN 237 L+KTF+PGEQVTTAVTWTGMGSAP CPLPRPAIGPGTYNLVVQLGNLRS+PVPF++N Sbjct 189 LIKTFTPGEQVTTAVTWTGMGSAPHCPLPRPAIGPGTYNLVVQLGNLRSMPVPFVMN 245 >gi|254773524|ref|ZP_05215040.1| hypothetical protein MaviaA2_02435 [Mycobacterium avium subsp. avium ATCC 25291] Length=277 Score = 362 bits (930), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 205/237 (87%), Positives = 216/237 (92%), Gaps = 0/237 (0%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 VLDLEPRGPLPTEIYWRRRGLA+GIAVVV+G+ A VIAF+ SAGAKP +ADKP SAQS Sbjct 9 VLDLEPRGPLPTEIYWRRRGLAVGIAVVVMGVVAAAVIAFMGHSAGAKPANADKPNSAQS 68 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 120 PGSPAPQAP P G A P QGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG Sbjct 69 KPGSPAPQAPPPPGPEGPAPAVPPAQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 128 Query 121 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 180 LTNAPQY++GDQPKFTMVVTNIGLV+CKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET Sbjct 129 LTNAPQYFIGDQPKFTMVVTNIGLVACKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 188 Query 181 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILN 237 L+KTF+PGEQVTTAVTWTGMGSAP CPLPRPAIGPGTYNLVVQLGNLRS PVPFI+N Sbjct 189 LIKTFTPGEQVTTAVTWTGMGSAPHCPLPRPAIGPGTYNLVVQLGNLRSQPVPFIMN 245 >gi|15828029|ref|NP_302292.1| hypothetical protein ML1918 [Mycobacterium leprae TN] gi|221230506|ref|YP_002503922.1| hypothetical protein MLBr_01918 [Mycobacterium leprae Br4923] gi|13093582|emb|CAC30873.1| conserved hypothetical membrane protein [Mycobacterium leprae] gi|219933613|emb|CAR72015.1| conserved hypothetical membrane protein [Mycobacterium leprae Br4923] Length=263 Score = 362 bits (928), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 188/238 (79%), Positives = 209/238 (88%), Gaps = 3/238 (1%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 +LDLEPRGPLPTEIYWRRRGLA + + V+ I +A ++A V + A A+P + DKP S+Q+ Sbjct 1 MLDLEPRGPLPTEIYWRRRGLA--VGITVIVIVIAAIVAVVGNGAAAQPANVDKPGSSQN 58 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 120 HPGS P+ P G EGN A APPQG+NPE+ T TAAVQPPPVL+EGDDCPDSTLAVKG Sbjct 59 HPGSATPKVLPPNGH-EGNLAPAPPQGRNPESSTSTAAVQPPPVLREGDDCPDSTLAVKG 117 Query 121 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 180 LTN PQY++GDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET Sbjct 118 LTNVPQYFLGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 177 Query 181 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQ 238 LVKTF+PGEQVTTAVTWTGMGS+P CPLPRPAIGPGTYNLVVQLGNL S+PVPFILNQ Sbjct 178 LVKTFTPGEQVTTAVTWTGMGSSPHCPLPRPAIGPGTYNLVVQLGNLHSMPVPFILNQ 235 >gi|118463517|ref|YP_879846.1| hypothetical protein MAV_0566 [Mycobacterium avium 104] gi|118164804|gb|ABK65701.1| conserved hypothetical protein [Mycobacterium avium 104] Length=277 Score = 361 bits (926), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 205/237 (87%), Positives = 216/237 (92%), Gaps = 0/237 (0%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 VLDLEPRGPLPTEIYWRRRGLA+GIAVVV+G+ A VIAF+ SAGAKP +ADKP SAQS Sbjct 9 VLDLEPRGPLPTEIYWRRRGLAVGIAVVVIGVVAAAVIAFMGHSAGAKPANADKPNSAQS 68 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 120 PGSPAPQAP P G A P QGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG Sbjct 69 KPGSPAPQAPPPPGPEGPAPAVPPAQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 128 Query 121 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 180 LTNAPQY++GDQPKFTMVVTNIGLV+CKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET Sbjct 129 LTNAPQYFIGDQPKFTMVVTNIGLVACKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 188 Query 181 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILN 237 L+KTF+PGEQVTTAVTWTGMGSAP CPLPRPAIGPGTYNLVVQLGNLRS PVPFI+N Sbjct 189 LIKTFTPGEQVTTAVTWTGMGSAPHCPLPRPAIGPGTYNLVVQLGNLRSQPVPFIMN 245 >gi|41406569|ref|NP_959405.1| hypothetical protein MAP0471 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394918|gb|AAS02788.1| hypothetical protein MAP_0471 [Mycobacterium avium subsp. paratuberculosis K-10] Length=277 Score = 361 bits (926), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 205/237 (87%), Positives = 216/237 (92%), Gaps = 0/237 (0%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 VLDLEPRGPLPTEIYWRRRGLA+GIAVVV+G+ A VIAF+ SAGAKP +ADKP SAQS Sbjct 9 VLDLEPRGPLPTEIYWRRRGLAVGIAVVVIGVVAAAVIAFMGHSAGAKPANADKPNSAQS 68 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 120 PGSPAPQAP P G A P QGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG Sbjct 69 KPGSPAPQAPAPPGPEGPAPAVPPAQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 128 Query 121 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 180 LTNAPQY++GDQPKFTMVVTNIGLV+CKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET Sbjct 129 LTNAPQYFIGDQPKFTMVVTNIGLVACKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 188 Query 181 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILN 237 L+KTF+PGEQVTTAVTWTGMGSAP CPLPRPAIGPGTYNLVVQLGNLRS PVPFI+N Sbjct 189 LIKTFTPGEQVTTAVTWTGMGSAPHCPLPRPAIGPGTYNLVVQLGNLRSQPVPFIMN 245 >gi|336458465|gb|EGO37438.1| hypothetical protein MAPs_12530 [Mycobacterium avium subsp. paratuberculosis S397] Length=277 Score = 359 bits (921), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 204/237 (87%), Positives = 215/237 (91%), Gaps = 0/237 (0%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 VLDLEPRGPLPTEIYWRRRGLA+GIAVVV+G+ A VIAF+ SAGAKP +ADKP SAQS Sbjct 9 VLDLEPRGPLPTEIYWRRRGLAVGIAVVVIGVVAAAVIAFMGHSAGAKPANADKPNSAQS 68 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 120 PGSPAPQAP P G A P QGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG Sbjct 69 KPGSPAPQAPAPPGPEGPAPAVPPAQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 128 Query 121 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 180 LTNAPQY++GDQPKFTMVVTNIGLV+CKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET Sbjct 129 LTNAPQYFIGDQPKFTMVVTNIGLVACKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 188 Query 181 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILN 237 L+KTF+PGEQVTTAV WTGMGSAP CPLPRPAIGPGTYNLVVQLGNLRS PVPFI+N Sbjct 189 LIKTFTPGEQVTTAVAWTGMGSAPHCPLPRPAIGPGTYNLVVQLGNLRSQPVPFIMN 245 >gi|296166643|ref|ZP_06849069.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897978|gb|EFG77558.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=236 Score = 322 bits (826), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 173/198 (88%), Positives = 179/198 (91%), Gaps = 0/198 (0%) Query 40 FVDSSAGAKPVSADKPASAQSHPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAV 99 F+ + GAKP SADKP SAQS PGSPAPQAP PA E AP QGQNPE PTPTAAV Sbjct 18 FMGHTGGAKPASADKPNSAQSKPGSPAPQAPPPAAPGEQPVPVAPQQGQNPEMPTPTAAV 77 Query 100 QPPPVLKEGDDCPDSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAY 159 QPPPVLKEGDDCPDSTLAVKGLTNAPQY+VGDQPKFTMVVTNIGLVSCKRDVGAAVLAAY Sbjct 78 QPPPVLKEGDDCPDSTLAVKGLTNAPQYFVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAY 137 Query 160 VYSLDNKRLWSNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYN 219 VYSLDNKRLWSNLDCAPSNETL+KTF+PGEQVTTAVTWTGMGSAP CPLPRPAIGPGTYN Sbjct 138 VYSLDNKRLWSNLDCAPSNETLIKTFTPGEQVTTAVTWTGMGSAPHCPLPRPAIGPGTYN 197 Query 220 LVVQLGNLRSLPVPFILN 237 LVVQLGNLRS PVPFI+N Sbjct 198 LVVQLGNLRSQPVPFIMN 215 >gi|289763766|ref|ZP_06523144.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium tuberculosis GM 1503] gi|289711272|gb|EFD75288.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium tuberculosis GM 1503] Length=183 Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 153/154 (99%), Positives = 153/154 (99%), Gaps = 0/154 (0%) Query 111 CPDSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWS 170 C DSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWS Sbjct 30 CSDSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWS 89 Query 171 NLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSL 230 NLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSL Sbjct 90 NLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSL 149 Query 231 PVPFILNQPPPPPGPVPAPGPAQAPPPESPAQGG 264 PVPFILNQPPPPPGPVPAPGPAQAPPPESPAQGG Sbjct 150 PVPFILNQPPPPPGPVPAPGPAQAPPPESPAQGG 183 >gi|333992519|ref|YP_004525133.1| hypothetical protein JDM601_3879 [Mycobacterium sp. JDM601] gi|333488487|gb|AEF37879.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=253 Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 169/240 (71%), Positives = 189/240 (79%), Gaps = 11/240 (4%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 +LDLEP+GPLP++IYWRRRGLALGIAV V+ + AI+ A V+SSAGA+ K + Q Sbjct 1 MLDLEPQGPLPSQIYWRRRGLALGIAVAVIAVVAAIIFAVVNSSAGAENADGKKTTATQQ 60 Query 61 H--PGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAV 118 PG+PA +A P A PTPTAAV PPPVLKEGDDCPDSTLAV Sbjct 61 AKPPGAPAEEAKTPVVPPAEEAPPP--------APTPTAAVIPPPVLKEGDDCPDSTLAV 112 Query 119 KGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSN 178 KG+T PQY VG+QP+FTMVVTNIGLV+CKRDVGAAVLAAYVYSLDN+RLWSNLDCAPSN Sbjct 113 KGIT-GPQYTVGEQPQFTMVVTNIGLVACKRDVGAAVLAAYVYSLDNQRLWSNLDCAPSN 171 Query 179 ETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQ 238 ETLVKTF PGEQVTT VTWTGMGSAP+CPLPR IGPGTYNLVVQLGNLRS VPF+L + Sbjct 172 ETLVKTFDPGEQVTTTVTWTGMGSAPQCPLPRQPIGPGTYNLVVQLGNLRSATVPFMLTE 231 >gi|120406292|ref|YP_956121.1| hypothetical protein Mvan_5344 [Mycobacterium vanbaalenii PYR-1] gi|119959110|gb|ABM16115.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=258 Score = 284 bits (727), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 157/251 (63%), Positives = 176/251 (71%), Gaps = 33/251 (13%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 +LDLEP GPLP +IYWRRR LALGIA +V+GI VA+V V +S S ++P + +S Sbjct 1 MLDLEPHGPLPRQIYWRRRALALGIAALVIGIVVAVVAVVVMNST-----SNEQPTANES 55 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPP---------------VL 105 + A P G+NPE +P +L Sbjct 56 AAPAAE-------------AVPPPLPGENPEVKSPIQPPAQQAPPPTPTPTAAVVPPPIL 102 Query 106 KEGDDCPDSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDN 165 KEGDDCPDSTLAVKG+TN PQY VGDQPKFTMVVTNIGLV+C+RDVGAAVLAAYVYSLDN Sbjct 103 KEGDDCPDSTLAVKGITNQPQYVVGDQPKFTMVVTNIGLVACQRDVGAAVLAAYVYSLDN 162 Query 166 KRLWSNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLG 225 +RLWSNLDCAPSNETL+KTF PGEQVTT VTWTGMGSAP CPLPR IGPGTYNLVVQLG Sbjct 163 QRLWSNLDCAPSNETLIKTFQPGEQVTTEVTWTGMGSAPNCPLPRQPIGPGTYNLVVQLG 222 Query 226 NLRSLPVPFIL 236 NLRS VPFIL Sbjct 223 NLRSATVPFIL 233 >gi|126437694|ref|YP_001073385.1| hypothetical protein Mjls_5130 [Mycobacterium sp. JLS] gi|126237494|gb|ABO00895.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=256 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 171/272 (63%), Positives = 194/272 (72%), Gaps = 36/272 (13%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 +LDLEP+GPLPT+IYWRRR LALG+AVVV+GI A+V+ V +GA+ +ADK + A++ Sbjct 1 MLDLEPQGPLPTQIYWRRRALALGVAVVVIGIVAAVVVMVVSGGSGAETKNADKQSVAEA 60 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPV---------------L 105 P +P P G+NPE TP L Sbjct 61 PP-TPLP-------------------GENPEVKTPIVPPPQQAPPPTPTPTAAVAPPPVL 100 Query 106 KEGDDCPDSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDN 165 +EGDDCPDSTLAVKG+T+ P+Y VGDQPKFTMVVTNIGLV+CKRDVGAAVLAAYVYSLDN Sbjct 101 QEGDDCPDSTLAVKGITSQPEYVVGDQPKFTMVVTNIGLVACKRDVGAAVLAAYVYSLDN 160 Query 166 KRLWSNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLG 225 RLWSNLDCAPSNETLVKTF+PGEQVTT VTWTGMGSAP+CPLPR IG GTYNL+VQLG Sbjct 161 TRLWSNLDCAPSNETLVKTFAPGEQVTTEVTWTGMGSAPQCPLPRQPIGAGTYNLIVQLG 220 Query 226 NLRSLPVPFILNQPPPPPGPVPAPGPAQAPPP 257 NLRS PVPFIL P PPG PAPG A PP Sbjct 221 NLRSSPVPFIL-APATPPGQAPAPGAPGAQPP 251 >gi|108801707|ref|YP_641904.1| hypothetical protein Mmcs_4744 [Mycobacterium sp. MCS] gi|119870858|ref|YP_940810.1| hypothetical protein Mkms_4830 [Mycobacterium sp. KMS] gi|108772126|gb|ABG10848.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696947|gb|ABL94020.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=256 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 171/272 (63%), Positives = 194/272 (72%), Gaps = 36/272 (13%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 +LDLEP+GPLPT+IYWRRR LALG+AVVV+GI A+V+ V +GA+ +ADK + A++ Sbjct 1 MLDLEPQGPLPTQIYWRRRALALGVAVVVIGIVAAVVVMVVSGGSGAETKNADKQSVAEA 60 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPV---------------L 105 P +P P G+NPE TP L Sbjct 61 AP-TPLP-------------------GENPEVKTPIVPPPQQAPPPTPTPTAAIAPPPVL 100 Query 106 KEGDDCPDSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDN 165 +EGDDCPDSTLAVKG+T+ P+Y VGDQPKFTMVVTNIGLV+CKRDVGAAVLAAYVYSLDN Sbjct 101 QEGDDCPDSTLAVKGITSQPEYVVGDQPKFTMVVTNIGLVACKRDVGAAVLAAYVYSLDN 160 Query 166 KRLWSNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLG 225 RLWSNLDCAPSNETLVKTF+PGEQVTT VTWTGMGSAP+CPLPR IG GTYNL+VQLG Sbjct 161 TRLWSNLDCAPSNETLVKTFAPGEQVTTEVTWTGMGSAPQCPLPRQPIGAGTYNLIVQLG 220 Query 226 NLRSLPVPFILNQPPPPPGPVPAPGPAQAPPP 257 NLRS PVPFIL P PPG PAPG A PP Sbjct 221 NLRSSPVPFIL-APATPPGQAPAPGAPGAQPP 251 >gi|145222032|ref|YP_001132710.1| hypothetical protein Mflv_1440 [Mycobacterium gilvum PYR-GCK] gi|315446226|ref|YP_004079105.1| hypothetical protein Mspyr1_47270 [Mycobacterium sp. Spyr1] gi|145214518|gb|ABP43922.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315264529|gb|ADU01271.1| hypothetical protein Mspyr1_47270 [Mycobacterium sp. Spyr1] Length=266 Score = 275 bits (704), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 163/273 (60%), Positives = 190/273 (70%), Gaps = 39/273 (14%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 VLDLEP GPLP +IYWRRR LA GIA +V+ + VA++ V ++ S ++PA+++S Sbjct 9 VLDLEPHGPLPRQIYWRRRALAAGIAALVIAVVVAVITVVVLNTR-----STEQPAASES 63 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPP---------------VL 105 A +T G AA P G+NP+ +P +L Sbjct 64 ------------AAET-GQAAPPPLPGENPDVKSPIQPPAQQAPPPTPTPTAAVVPPPIL 110 Query 106 KEGDDCPDSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDN 165 KEGDDCPDSTLAVKG+TN PQ+ VGDQPKFTMVVTNIGLV+C+RDVGAAVLAAYVY+LDN Sbjct 111 KEGDDCPDSTLAVKGITNQPQFIVGDQPKFTMVVTNIGLVACQRDVGAAVLAAYVYTLDN 170 Query 166 KRLWSNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLG 225 +RLWSNLDCAPSNETL+KTF PGEQVTT VTWTGM SAP CPLPR IG GTYNLVVQLG Sbjct 171 QRLWSNLDCAPSNETLIKTFQPGEQVTTEVTWTGMSSAPNCPLPRQPIGAGTYNLVVQLG 230 Query 226 NLRSLPVPFILNQ----PPPPPG--PVPAPGPA 252 NLRS PVPFIL + PPP G +P PGPA Sbjct 231 NLRSAPVPFILAEAAAMPPPVEGAPHLPVPGPA 263 >gi|118471796|ref|YP_890303.1| hypothetical protein MSMEG_6081 [Mycobacterium smegmatis str. MC2 155] gi|118173083|gb|ABK73979.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=261 Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 173/242 (72%), Positives = 193/242 (80%), Gaps = 4/242 (1%) Query 2 LDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIA-FVDSSAGAKPVSADKPASAQS 60 +DLEP+GPLP +IYWRRR LA+GIAVVVVG+ AIV +SS+G++ +AD+ S ++ Sbjct 1 MDLEPQGPLPAQIYWRRRALAIGIAVVVVGVVAAIVAVIMTNSSSGSENTAADQ--SNET 58 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPP-QGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVK 119 AP P P PP Q P TPTPTAAV PPPVLKEGDDCPDSTLAVK Sbjct 59 AAQEAAPPTPLPGEDPAVKTPIVPPAQHAPPPTPTPTAAVTPPPVLKEGDDCPDSTLAVK 118 Query 120 GLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNE 179 G+T+ P+Y VGDQPKFTMVVTNIGLV+CKRDVGAAVLAAYVYSLDN RLWSNLDCAPSNE Sbjct 119 GITSQPEYVVGDQPKFTMVVTNIGLVACKRDVGAAVLAAYVYSLDNTRLWSNLDCAPSNE 178 Query 180 TLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQP 239 TLVKTF+PGEQVTT VTWTGMGSAP+CPLPR IGPGTYNLVVQLGNLRS PVPFIL + Sbjct 179 TLVKTFNPGEQVTTEVTWTGMGSAPQCPLPRQPIGPGTYNLVVQLGNLRSAPVPFILAEA 238 Query 240 PP 241 P Sbjct 239 NP 240 >gi|169627664|ref|YP_001701313.1| hypothetical protein MAB_0561 [Mycobacterium abscessus ATCC 19977] gi|169239631|emb|CAM60659.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=248 Score = 258 bits (659), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 144/238 (61%), Positives = 173/238 (73%), Gaps = 3/238 (1%) Query 1 VLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQS 60 ++D+ P GPLP+EIYWRRR LA+G+ VVVV I A++ A V SAGA +A+KPA + + Sbjct 1 MMDMHPSGPLPSEIYWRRRALAIGVVVVVVAIVAAVIFALVGGSAGADTKAAEKPAESAA 60 Query 61 HPGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKG 120 G P P + A AP P + PP L GDDCPD+TLAVK Sbjct 61 PAGKPVILPPNEINKPADKPAEAPVHDG---PPIAKPELVPPVALNPGDDCPDATLAVKA 117 Query 121 LTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNET 180 T+ P Y G+QPKFTMVVTNIGLV CKRDVGAAVLAA V+S+DNKR+W+NLDCAPS E+ Sbjct 118 STDKPSYLAGEQPKFTMVVTNIGLVQCKRDVGAAVLAASVFSVDNKRIWANLDCAPSQES 177 Query 181 LVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQ 238 +K+F+PGEQVTT VTWTGMGSAP CPLPRPAIGPGTY+LVVQLG+LRS PVPFI+ + Sbjct 178 SIKSFNPGEQVTTEVTWTGMGSAPNCPLPRPAIGPGTYSLVVQLGDLRSAPVPFIIGE 235 >gi|312138092|ref|YP_004005428.1| hypothetical protein REQ_06250 [Rhodococcus equi 103S] gi|311887431|emb|CBH46743.1| putative secreted protein [Rhodococcus equi 103S] Length=224 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 97/232 (42%), Positives = 134/232 (58%), Gaps = 13/232 (5%) Query 4 LEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQSHPG 63 LEP GPLP EIYWRRR LA+G AVVV+ + V IV+ S G ++ A+A + Sbjct 2 LEPNGPLPPEIYWRRRALAIGAAVVVLALIVWIVL-----SIGGGDDDSESTAAAATSEL 56 Query 64 SPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTN 123 + + +AP + Q+E + + + T + T + P DC D +LA+K + Sbjct 57 TESSEAPTTS-QSEDPSGTSGAGSSSTTTASSTTSANP------SKDCADQSLALKVTPD 109 Query 124 APQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDN-KRLWSNLDCAPSNETLV 182 PQY GD+P FT+ +TNIG +C+RD+G+ + VYSLD RLWSN+DC PS+E V Sbjct 110 QPQYKAGDEPGFTIAITNIGTNACERDLGSGLQQVLVYSLDGANRLWSNVDCFPSSEPEV 169 Query 183 KTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPF 234 +T PG Q V W+ SAP C PR + PG Y +V QLG+L+S P PF Sbjct 170 RTLEPGGQARFTVKWSAKTSAPGCTAPREPVAPGGYTVVGQLGSLKSNPEPF 221 >gi|325675004|ref|ZP_08154691.1| hypothetical protein HMPREF0724_12473 [Rhodococcus equi ATCC 33707] gi|325554590|gb|EGD24265.1| hypothetical protein HMPREF0724_12473 [Rhodococcus equi ATCC 33707] Length=217 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 90/226 (40%), Positives = 124/226 (55%), Gaps = 13/226 (5%) Query 10 LPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQSHPGSPAPQA 69 +P EIYWRRR LA+G AVVV+ + V IV+ S G ++ A+A + + + +A Sbjct 1 MPPEIYWRRRALAIGAAVVVLALIVWIVL-----SIGGGDDDSESTAAAATSELTESSEA 55 Query 70 PQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYYV 129 P + A P G + + T DC D +LA+K + PQY Sbjct 56 PT-------TSQAEDPSGTSGADSSSTTTASSTTSANPSKDCADQSLALKVTPDQPQYKA 108 Query 130 GDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDN-KRLWSNLDCAPSNETLVKTFSPG 188 GD+P FT+ +TNIG +C+RD+G+ + VYSLD RLWSN+DC PS+E V+T PG Sbjct 109 GDEPGFTIAITNIGTNACERDLGSGLQQVLVYSLDGANRLWSNVDCFPSSEPEVRTLEPG 168 Query 189 EQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPF 234 Q V W+ SAP C PR + PG Y +V QLG+L+S P PF Sbjct 169 GQARFTVKWSAKTSAPGCTAPREPVAPGGYTVVGQLGSLKSNPEPF 214 >gi|111021422|ref|YP_704394.1| hypothetical protein RHA1_ro04450 [Rhodococcus jostii RHA1] gi|110820952|gb|ABG96236.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=254 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/132 (48%), Positives = 83/132 (63%), Gaps = 5/132 (3%) Query 111 CPDSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNK-RLW 169 CPD +LA+K + P Y G++P FT VVTNIG C+RD+G+++ VY++D RLW Sbjct 123 CPDQSLAIKVAADKPTYLAGEEPSFTTVVTNIGTTPCERDLGSSLQQVLVYTIDGAVRLW 182 Query 170 SNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRC---PLP-RPAIGPGTYNLVVQLG 225 SN+DC P + V+T +PGEQ V W+ SAP C P P R +GPG Y +V QLG Sbjct 183 SNIDCFPQSAADVRTLAPGEQAQFTVKWSAKTSAPDCLTQPEPQRDPVGPGAYTVVGQLG 242 Query 226 NLRSLPVPFILN 237 LRS P PF L+ Sbjct 243 QLRSAPEPFNLS 254 >gi|296138331|ref|YP_003645574.1| hypothetical protein Tpau_0597 [Tsukamurella paurometabola DSM 20162] gi|296026465|gb|ADG77235.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=264 Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 87/251 (35%), Positives = 123/251 (50%), Gaps = 16/251 (6%) Query 4 LEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQSH-P 62 LEP GPLP EIYWRRR LA +A + V + V +++ ++P +AD ++ Q+ P Sbjct 2 LEPNGPLPPEIYWRRRVLAAALAALAVLVVVLLIVFVGGGKDSSEPAAADSSSATQTDLP 61 Query 63 GSPAPQAPQPAG-------------QTEGNAAAAPPQG-QNPETPTPTAAVQPPPVLKEG 108 S P + + Q+ + + AP G Q+ P V P + G Sbjct 62 SSQPPSSGESGAPGGGSAAGQSGAPQSGASPSGAPQSGAQSSGAPQSGGGVPTPGAVVAG 121 Query 109 DDCPDSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLD-NKR 167 CPD+ ++V + P Y VG+QP F VTN G V C RD+G V +LD +K+ Sbjct 122 GPCPDTNISVVVAADKPSYAVGEQPTFEATVTNAGSVPCSRDIGTGQQQLAVLTLDGSKQ 181 Query 168 LWSNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNL 227 LWSN DC E + PG+Q+ + W G SAP C R + PG Y +V Q G Sbjct 182 LWSNFDCTFQPEIKNEVLQPGQQIRYKLQWAGTTSAPGCQAQRVPVAPGAYQVVAQFGAK 241 Query 228 RSLPVPFILNQ 238 RS PV F + + Sbjct 242 RSAPVTFNVTK 252 >gi|333918026|ref|YP_004491607.1| hypothetical protein AS9A_0348 [Amycolicicoccus subflavus DQS3-9A1] gi|333480247|gb|AEF38807.1| hypothetical protein AS9A_0348 [Amycolicicoccus subflavus DQS3-9A1] Length=250 Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 56/127 (45%), Positives = 83/127 (66%), Gaps = 1/127 (0%) Query 111 CPDSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDN-KRLW 169 C DS+L+V+ + +Y +GDQP+F +VVTNIG +C RD+G AV V +++N +R+W Sbjct 101 CADSSLSVRATIDRAEYPIGDQPRFGVVVTNIGDTTCARDLGPAVQQISVRAVENDRRVW 160 Query 170 SNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRS 229 N DCAP+ V T +PG+Q A+TW+G GSAP C PR A+ G Y ++ Q+G + + Sbjct 161 VNTDCAPTTGRDVWTLAPGDQAAFAITWSGTGSAPGCFGPRDAVDSGVYRVLAQVGEISA 220 Query 230 LPVPFIL 236 PV F + Sbjct 221 EPVEFAI 227 >gi|226363777|ref|YP_002781559.1| hypothetical protein ROP_43670 [Rhodococcus opacus B4] gi|226242266|dbj|BAH52614.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=253 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 62/132 (47%), Positives = 82/132 (63%), Gaps = 5/132 (3%) Query 111 CPDSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNK-RLW 169 CPD +LA+K + P Y G++P FT VVTNIG C+RD+G+++ VY++D RLW Sbjct 122 CPDQSLAIKVAADKPTYLPGEEPSFTTVVTNIGTTPCERDLGSSLQQVLVYTIDGAVRLW 181 Query 170 SNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRC---PLP-RPAIGPGTYNLVVQLG 225 SN+DC P + V+T + GEQ V W+ SAP C P P R +GPG Y +V QLG Sbjct 182 SNIDCFPQSAADVRTLAAGEQAQFTVKWSAKTSAPDCLTQPEPQRDPVGPGAYTVVGQLG 241 Query 226 NLRSLPVPFILN 237 LRS P PF L+ Sbjct 242 QLRSAPEPFNLS 253 >gi|262200961|ref|YP_003272169.1| hypothetical protein Gbro_0965 [Gordonia bronchialis DSM 43247] gi|262084308|gb|ACY20276.1| hypothetical protein Gbro_0965 [Gordonia bronchialis DSM 43247] Length=261 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 89/251 (36%), Positives = 121/251 (49%), Gaps = 20/251 (7%) Query 4 LEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQSHPG 63 +EP+GPLP EIYWRRR +A +VVV + V +++ + + + + P S+ + P Sbjct 2 IEPQGPLPPEIYWRRRIVAAAGGLVVVAVVVGLIVWMTSGNGDPQNTANNAPLSSTTTPA 61 Query 64 SP--APQAPQP-------------AGQTEGNAAAAPPQGQNPETPTPTAAVQPPPV---- 104 +P AP QP T G + AP P TP T Q V Sbjct 62 APSVAPSESQPPGDGGTGGNGGNGGNGTGGTDSTAPSGSTAPTTPGQTTPGQTSNVPAGP 121 Query 105 LKEGDDCPDSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLD 164 G CPD ++V L + P Y VG +P FT+V+TN G+ +C RDVG A V +LD Sbjct 122 APAGGLCPDEAISVVLLLDKPTYTVGQRPVFTLVITNAGVSACTRDVGKASQNVIVRTLD 181 Query 165 NKR-LWSNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQ 223 R LWS DC+P + PG+QV +TW+G S P C PR I G Y V + Sbjct 182 GTRTLWSARDCSPLQTVNNQLLQPGQQVRDTITWSGTTSNPGCNQPRRQIPVGAYKAVGK 241 Query 224 LGNLRSLPVPF 234 +G S P F Sbjct 242 IGERESFPQTF 252 >gi|229494298|ref|ZP_04388061.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229318660|gb|EEN84518.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=247 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 82/244 (34%), Positives = 117/244 (48%), Gaps = 14/244 (5%) Query 4 LEPRGPLPTEIYWRRR----GLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQ 59 LEP GPLP EIYWRRR G A+ +++ A A+ D+ ++ + Sbjct 2 LEPNGPLPPEIYWRRRALAIGAAVIALALIIWAASALFGGGSDTPEADSAAASSSLTTDV 61 Query 60 SH----PGSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDST 115 S GS AP+ +G + + + + +++ + G C DS+ Sbjct 62 SFTPNPSGSNAPEGGGGSGGGAAGGSGGSGTQASGSSSSSSSSSTTGAPVPAGQ-CADSS 120 Query 116 LAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNK-RLWSNLDC 174 LAVK + + G++P FT+V+TNIG C RD+ + VYS+D K RLWSN+DC Sbjct 121 LAVKATADKATFAPGEEPSFTIVITNIGSAPCDRDLAGGLQQVLVYSIDGKTRLWSNVDC 180 Query 175 APSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPL----PRPAIGPGTYNLVVQLGNLRSL 230 P V+ +PGEQ V W+ S P C R +G G Y +V QLG LRS Sbjct 181 YPQPAADVRNLAPGEQAAFKVAWSATTSTPECATAQNPERNPVGAGAYTVVGQLGALRSS 240 Query 231 PVPF 234 P PF Sbjct 241 PEPF 244 >gi|54022395|ref|YP_116637.1| hypothetical protein nfa4310 [Nocardia farcinica IFM 10152] gi|54013903|dbj|BAD55273.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=196 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 57/127 (45%), Positives = 76/127 (60%), Gaps = 1/127 (0%) Query 109 DDCPDSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLD-NKR 167 + CPD +LAVK P Y VG+QP F +V+TNI C RDVG+A +V +LD +R Sbjct 67 NQCPDQSLAVKVTVAQPTYRVGEQPVFGIVITNISAEPCARDVGSAAQQVFVQTLDGTRR 126 Query 168 LWSNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNL 227 LW++ DC P + V+T GEQ VTW+G S P C R + PG Y++V QLG++ Sbjct 127 LWASTDCYPDGQPDVRTLDRGEQAAFQVTWSGSTSQPNCAGERVPVPPGAYSVVAQLGSV 186 Query 228 RSLPVPF 234 RS PF Sbjct 187 RSAAEPF 193 >gi|326383084|ref|ZP_08204773.1| hypothetical protein SCNU_09106 [Gordonia neofelifaecis NRRL B-59395] gi|326198220|gb|EGD55405.1| hypothetical protein SCNU_09106 [Gordonia neofelifaecis NRRL B-59395] Length=238 Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 56/134 (42%), Positives = 73/134 (55%), Gaps = 1/134 (0%) Query 111 CPDSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKR-LW 169 C D +L+V T+ P Y VGDQP FT+V TN GL +C RDVG A V +LD R LW Sbjct 102 CSDQSLSVVLYTDKPTYTVGDQPVFTIVTTNGGLAACSRDVGKAAQNVIVRTLDGSRTLW 161 Query 170 SNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRS 229 S DCAP ++ PG+QV+ VTW+G S+P C R + G Y ++G S Sbjct 162 SAQDCAPDKGVNIQVLQPGQQVSDTVTWSGTTSSPGCTKKRVQVAAGGYQATAKMGERES 221 Query 230 LPVPFILNQPPPPP 243 P+ F + P P Sbjct 222 APITFNVVAPAQAP 235 >gi|226304170|ref|YP_002764128.1| hypothetical protein RER_06810 [Rhodococcus erythropolis PR4] gi|226183285|dbj|BAH31389.1| hypothetical protein RER_06810 [Rhodococcus erythropolis PR4] Length=247 Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 56/129 (44%), Positives = 72/129 (56%), Gaps = 5/129 (3%) Query 111 CPDSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNK-RLW 169 C DS+LAVK + + G++P FT+V+TNIG C RD+ + VYS+D K RLW Sbjct 116 CADSSLAVKATADKATFAPGEEPSFTIVITNIGSAPCDRDLAGGLQQVLVYSIDGKTRLW 175 Query 170 SNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPL----PRPAIGPGTYNLVVQLG 225 SN+DC P V+ +PGEQ V W+ S P C R +G G Y +V QLG Sbjct 176 SNVDCYPQPAADVRNLAPGEQAAFKVAWSATTSTPECATAQNPERNPVGAGAYTVVGQLG 235 Query 226 NLRSLPVPF 234 LRS P PF Sbjct 236 ALRSSPEPF 244 >gi|296392876|ref|YP_003657760.1| hypothetical protein Srot_0442 [Segniliparus rotundus DSM 44985] gi|296180023|gb|ADG96929.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length=204 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 57/130 (44%), Positives = 73/130 (57%), Gaps = 1/130 (0%) Query 106 KEGDDCPDSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLD- 164 + G C D LAV + Y VG+QPKF VVTN + C+RDVG + A V +LD Sbjct 70 QAGQLCSDDVLAVVVSADKATYNVGEQPKFKGVVTNGSALPCQRDVGDGMQAFIVSTLDG 129 Query 165 NKRLWSNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQL 224 + R+WS+ DCAP+N ++ PG+QV TWTG S+P C R I PG Y +V QL Sbjct 130 SDRVWSSQDCAPTNGQSLQMLKPGQQVAFQATWTGKTSSPGCQEERVDIQPGYYRVVAQL 189 Query 225 GNLRSLPVPF 234 G S P F Sbjct 190 GQKVSAPATF 199 >gi|317507821|ref|ZP_07965522.1| hypothetical protein HMPREF9336_01894 [Segniliparus rugosus ATCC BAA-974] gi|316253863|gb|EFV13232.1| hypothetical protein HMPREF9336_01894 [Segniliparus rugosus ATCC BAA-974] Length=206 Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 77/222 (35%), Positives = 108/222 (49%), Gaps = 22/222 (9%) Query 14 IYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQSHPGSPAPQAPQPA 73 +Y RRR LALG+ +++ + +A V + G P A + Sbjct 1 MYLRRRSLALGVGALILVVIIAGVFLLL-------------------REGDSKPPA-RTP 40 Query 74 GQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYYVGDQP 133 AA QG +P + A P + + G C D+ LA+ + Y VGDQP Sbjct 41 TAASAPAAPPKAQGSSPSSSESPAPP-EPTLAQAGQPCSDNWLALVVSADKATYNVGDQP 99 Query 134 KFTMVVTNIGLVSCKRDVGAAVLAAYVYSLD-NKRLWSNLDCAPSNETLVKTFSPGEQVT 192 KFT V+TN + C+RDVG + V SLD + R+W++ DCAP+N ++ PG+QV Sbjct 100 KFTGVITNGSALPCQRDVGDGMQGFVVSSLDGSTRVWASQDCAPTNGQSLQMLKPGQQVQ 159 Query 193 TAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPF 234 TWTG S+P C R I PG+Y +V QLG S PV F Sbjct 160 FQATWTGKTSSPGCQDERVDIEPGSYRVVAQLGQKVSSPVTF 201 >gi|331699822|ref|YP_004336061.1| hypothetical protein Psed_6105 [Pseudonocardia dioxanivorans CB1190] gi|326954511|gb|AEA28208.1| hypothetical protein Psed_6105 [Pseudonocardia dioxanivorans CB1190] Length=281 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 87/282 (31%), Positives = 126/282 (45%), Gaps = 51/282 (18%) Query 5 EPRGPLPTEIYWRRRGLALGIAVV---VVGIAVAIVIAFVDSSAGAKP--VSADKPASAQ 59 EP GPLP +YWRRR +AL VV V+G+ VA ++ +P ++A++ A + Sbjct 3 EPTGPLPASVYWRRRWVALASVVVLFAVLGLTVAALVHGRSEPTSDEPTALAANQAALSG 62 Query 60 SHPGSPAPQAP------------QPAGQTE---------------GNAAAAPPQGQNPET 92 P S P AP PA T G + AP ++ Sbjct 63 EAPTSVLPAAPPGDPTAFVAPGADPADPTVGTGVTTGPGTQIAPAGAPSTAPVTDESRVE 122 Query 93 PTPTAAVQPPPVLKEGDD---------------CPDSTLAVKGLTNAPQYYVGDQPKFTM 137 +P AA + L GD C + L+V + P + VGD+P + Sbjct 123 TSPVAAAE---ALPPGDQQPSPPATVPPTGPVPCTNDMLSVGATIDRPDHKVGDKPVVGV 179 Query 138 VVTNIGLVSCKRDVGAAVLAAYVYSLDN-KRLWSNLDCAPSNETLVKTFSPGEQVTTAVT 196 VVTN C RD+ + L V+S D RLWS+ DCA + ++T PG+ V+ +VT Sbjct 180 VVTNTSGEPCVRDLDGSRLEIVVWSGDGVNRLWSSNDCANPSTPDLRTLVPGQPVSFSVT 239 Query 197 WTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQ 238 W G S P C PR + G Y L+ ++ +L S P PF+L Sbjct 240 WQGRTSTPGCAAPRTVVPAGAYRLLTRIDDLISPPTPFLLTS 281 >gi|343925915|ref|ZP_08765430.1| hypothetical protein GOALK_050_02110 [Gordonia alkanivorans NBRC 16433] gi|343764266|dbj|GAA12356.1| hypothetical protein GOALK_050_02110 [Gordonia alkanivorans NBRC 16433] Length=255 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 52/134 (39%), Positives = 71/134 (53%), Gaps = 1/134 (0%) Query 111 CPDSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKR-LW 169 CPD ++V T+ P Y +G QP FT+V TN GL C RDVG A V +LD R LW Sbjct 122 CPDQAISVVLYTDKPTYTIGQQPVFTIVTTNAGLSDCTRDVGKAAQNVIVRTLDGSRTLW 181 Query 170 SNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRS 229 S DC+P P +QV +TW+G S+P C PR + G+Y+ + ++G S Sbjct 182 SARDCSPIETVNNVVLKPAQQVKDTITWSGTTSSPGCERPRTQVPAGSYSAIGKIGERES 241 Query 230 LPVPFILNQPPPPP 243 P+ F + P P Sbjct 242 FPITFNVVAPAQEP 255 >gi|255325862|ref|ZP_05366954.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] gi|255297074|gb|EET76399.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] Length=234 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 79/241 (33%), Positives = 114/241 (48%), Gaps = 14/241 (5%) Query 4 LEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASA---QS 60 + + PLP EIY RRR AL ++V+ +AV ++ A V + G+ AD A A + Sbjct 1 MTQKKPLPEEIYKRRRVAAL---IIVLVLAVVLIWAAVAAFGGSSDEPADTAAPAPTPEQ 57 Query 61 HPGSPAPQAPQPAGQTEGNAAAA-PPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVK 119 S AP+ + A +T +A + + E+ +AA K+ D D L V+ Sbjct 58 TSSSAAPKTSEAASETAAETSAEGASESKAAESEQLSAAPASSEAAKKTCDLAD--LQVR 115 Query 120 GLTNAPQYYV--GDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSL-DNKRLWSNLDCAP 176 T+ Y V G+ PKF M VTN CK D+ +L VY + DN+R+WS+ DC Sbjct 116 --TSMLNYSVPEGELPKFFMTVTNPTAADCKIDLDKNLLRFEVYKMADNQRVWSDTDCYA 173 Query 177 SNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFIL 236 S +T +TF G+ V W+ S P RPA PG Y +G+ S P F L Sbjct 174 SVQTGSQTFPAGKDVKFEAEWSRQASKPGECTDRPAAEPGAYFAHTVIGDNSSPPQDFTL 233 Query 237 N 237 Sbjct 234 R 234 >gi|324997776|ref|ZP_08118888.1| hypothetical protein PseP1_03370 [Pseudonocardia sp. P1] Length=264 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 46/127 (37%), Positives = 68/127 (54%), Gaps = 1/127 (0%) Query 111 CPDSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDN-KRLW 169 C D + V+ T P Y G +P+ +VVTN C RD+ A V+S D ++LW Sbjct 137 CSDGMIEVRSETGQPNYPAGARPELRLVVTNTSGQPCVRDLDGAEQEIAVWSGDGAQKLW 196 Query 170 SNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRS 229 S+ DC ++T PG+ V AVTW+G+GS P C R + PG Y ++ +LG + S Sbjct 197 SSNDCVNPATDDLRTLVPGQPVAFAVTWSGLGSEPGCGAERDRVTPGGYRVLARLGTVVS 256 Query 230 LPVPFIL 236 P P ++ Sbjct 257 EPAPLLM 263 >gi|256374500|ref|YP_003098160.1| hypothetical protein Amir_0345 [Actinosynnema mirum DSM 43827] gi|255918803|gb|ACU34314.1| hypothetical protein Amir_0345 [Actinosynnema mirum DSM 43827] Length=266 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 45/128 (36%), Positives = 65/128 (51%), Gaps = 2/128 (1%) Query 111 CPDSTLAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDN-KRLW 169 C D+ + V+ + Q+ VG+ F + VTN G + C R++G V V S D RLW Sbjct 140 CDDAAVLVRAVLGKEQHAVGEHADFRIAVTNTGQLPCTREIGRGVRELVVTSPDGATRLW 199 Query 170 SNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRS 229 S+ DC + + V+ PGE + W G SAP C PR +G G Y LV ++G+ S Sbjct 200 SSNDCLAAEGSEVRVMKPGEVFEFGLKWPGTTSAPGCG-PRTRLGAGDYLLVARVGDRSS 258 Query 230 LPVPFILN 237 P F + Sbjct 259 DPAVFRIG 266 >gi|311740172|ref|ZP_07714004.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] gi|311304727|gb|EFQ80798.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] Length=234 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 78/251 (32%), Positives = 113/251 (46%), Gaps = 34/251 (13%) Query 4 LEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQSHPG 63 + + PLP EIY RRR AL ++V+ +AV ++ A V + G S+D+PA Sbjct 1 MTQKKPLPEEIYKRRRVAAL---IIVLVLAVVLIWAAVAAFGG----SSDEPADT----A 49 Query 64 SPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDD------------- 110 +PAP P+ QT +AA + + +A + E + Sbjct 50 APAP-TPE---QTSSSAAPETSEAASETAAEASAEGASESKVAESEQLSAAPASSEAAKK 105 Query 111 -CPDSTLAVKGLTNAPQYYV--GDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSL-DNK 166 C + L V+ T+ Y V G+ PKF M VTN CK D+ +L VY + DN+ Sbjct 106 TCDLADLQVR--TSMLNYSVPEGELPKFFMTVTNPTAADCKIDLDKNLLRFEVYKMADNQ 163 Query 167 RLWSNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGN 226 R+WS+ DC S +T +TF G+ V W+ S P RPA PG Y +G+ Sbjct 164 RVWSDTDCYASVQTGSQTFPAGKDVKFEAEWSRQASKPGECTDRPAAEPGAYFAHTVIGD 223 Query 227 LRSLPVPFILN 237 S P F L Sbjct 224 NSSPPQDFTLR 234 >gi|25029082|ref|NP_739136.1| hypothetical protein CE2526 [Corynebacterium efficiens YS-314] gi|259505923|ref|ZP_05748825.1| secreted protein [Corynebacterium efficiens YS-314] gi|23494369|dbj|BAC19336.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259166404|gb|EEW50958.1| secreted protein [Corynebacterium efficiens YS-314] Length=238 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 70/242 (29%), Positives = 107/242 (45%), Gaps = 37/242 (15%) Query 14 IYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQSHPGS--------- 64 IY RRR AL I +VV+ +A+ + +S G + D A+ + S Sbjct 14 IYRRRRIAALVILLVVIALAIWGL-----TSLGGEETDTDPAAATTTLDNSVDLTPETTT 68 Query 65 --------PAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTL 116 A +P+ A + +AA +G E+P PT A + D C S L Sbjct 69 EETTEKTTAASSSPEDAAGSSVSAA----EGTTEESPEPTGAPK--------DSCELSDL 116 Query 117 AVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSL-DNKRLWSNLDCA 175 + +N P + G++P+ M V N C+ D+ VL VY L N R+W+++DC Sbjct 117 IITAGSNKPNFAPGEEPQLYMTVENPTAADCEVDLDDEVLRFEVYDLATNARVWADVDCN 176 Query 176 PSNETLVKTFSPGEQVTTAVTWTGMGSAP-RCPLPRPAIGPGTYNLVVQLGNLRSLPVPF 234 P+ ET + F GE+ W+ SAP RC +P + G Y L +G+ S + F Sbjct 177 PAVETGTRVFPAGEERYFQAIWSRTTSAPERCSDRQP-VPAGAYFLHTVIGDNPSQALTF 235 Query 235 IL 236 L Sbjct 236 NL 237 >gi|308175915|ref|YP_003915321.1| hypothetical protein AARI_01110 [Arthrobacter arilaitensis Re117] gi|307743378|emb|CBT74350.1| conserved hypothetical membrane protein [Arthrobacter arilaitensis Re117] Length=205 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 56/223 (26%), Positives = 89/223 (40%), Gaps = 31/223 (13%) Query 14 IYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQSHPGSPAPQAPQPA 73 +Y RRR IA+V++G+ + ++A V G A K A +S P + + Sbjct 13 VYRRRRITVAVIALVLLGVLIWGIVALV----GLFTPDAQKTAGNESRTEQTQPASSPSS 68 Query 74 GQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYYVGDQP 133 Q + A+AA C D + + T+A Y P Sbjct 69 EQKDDEASAAM--------------------------CKDDEIEITATTDAKHYASDKNP 102 Query 134 KFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLVKTFSPGEQVTT 193 + + N+ C +VG+ ++ S R++S +DC E + TF PG++ + Sbjct 103 TLILGIENVSKRECDLNVGSR-QQEFLVSSGADRIFSTIDCLDQAEDVNLTFKPGQKENS 161 Query 194 AVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFIL 236 TW SAP C PGTY +G+ S PV F+L Sbjct 162 RFTWNRERSAPGCKAVSVQPRPGTYKFTAAIGDFVSEPVSFVL 204 >gi|227547930|ref|ZP_03977979.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] gi|227079941|gb|EEI17904.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] Length=235 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 71/230 (31%), Positives = 108/230 (47%), Gaps = 10/230 (4%) Query 9 PLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQSHPGSPAPQ 68 PLP EIY RRR AL I +V+V + V + A+ S +GA + A+ + + P Sbjct 13 PLPPEIYTRRRVAALVILLVLVALLVWGLTAWARSGSGAGETAESTTAAPPTEQITTEPT 72 Query 69 APQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDD-CPDSTLAVKGLTNAPQY 127 P P+ + A A T ++ P V +G + C + L ++ T+ P Y Sbjct 73 VPAPSDEETTTATAT--------TTAESSTEATPTVNTDGKETCELADLDIEAQTSEPSY 124 Query 128 YVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSL-DNKRLWSNLDCAPSNETLVKTFS 186 GDQP F M ++N C ++ L VY++ DN+R+WS++DC P T +TF+ Sbjct 125 AAGDQPVFYMKISNPTKADCVINLDDNQLRFEVYTMNDNQRVWSDVDCYPPVVTGEETFA 184 Query 187 PGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFIL 236 PGE W+ GS P R + G Y L +G+ S P F + Sbjct 185 PGEPRLFEARWSATGSKPGQCTNREPVAGGAYYLHAVVGDSASNPADFTI 234 >gi|227502082|ref|ZP_03932131.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49725] gi|227077141|gb|EEI15104.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49725] Length=238 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 72/239 (31%), Positives = 102/239 (43%), Gaps = 8/239 (3%) Query 4 LEPRGPLPTEIYWRRRGLALGIAVVVVGIAV-AIVIAFVDSSAGAKPVSADKPASAQSHP 62 + PLP EIY RRR AL I +V+ + + A V AF S + S++ A+ S Sbjct 1 MNQNKPLPEEIYKRRRVAALIIVIVLAVVLIWAAVAAFGGDSDDSVAASSESSAATTSAE 60 Query 63 GSPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPP--VLKEGDDCPDSTLAVKG 120 + +E + + PE + + P V D C L V+ Sbjct 61 TTSESSTTSADSTSESESESESDSASEPEAKDGASESKEPEESVHAAKDTCSLEDLEVR- 119 Query 121 LTNAPQYYV--GDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSL-DNKRLWSNLDCAPS 177 T+ Y V G+ PKF M VTN CK D+ L VY + DN+R+WS+ DC S Sbjct 120 -TSMLNYSVPDGELPKFFMTVTNPTAADCKIDLDENSLRFEVYKMADNQRVWSDTDCYAS 178 Query 178 NETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFIL 236 +T +TF G+ + W+ S P RP PG Y +G+ S P F L Sbjct 179 VQTGEQTFPAGKDLKFEAEWSRQASEPGKCTDRPTAEPGAYFAHTVIGDNSSPPQDFTL 237 >gi|284989238|ref|YP_003407792.1| MucR family transcriptional regulator [Geodermatophilus obscurus DSM 43160] gi|284062483|gb|ADB73421.1| transcriptional regulator, MucR family [Geodermatophilus obscurus DSM 43160] Length=224 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/132 (35%), Positives = 64/132 (49%), Gaps = 5/132 (3%) Query 108 GDDCPDST--LAVKGLTNAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDN 165 GD C D L V+G + P VG +P F +VV N+ V C R + + + Sbjct 96 GDPCGDDMIELEVRGPGSVP---VGGKPTFELVVINVSSVPCVRVLDEGLQEIVMSDAAG 152 Query 166 KRLWSNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLG 225 R+W + DC P + + +T +PGE V + W G+ S P C R A PG Y L +LG Sbjct 153 NRVWGSNDCFPESSSDTRTLAPGESVIFPLVWGGLTSEPSCTAARTAPAPGQYALRGRLG 212 Query 226 NLRSLPVPFILN 237 S VPF ++ Sbjct 213 TKVSTDVPFTVS 224 >gi|227834041|ref|YP_002835748.1| hypothetical protein cauri_2219 [Corynebacterium aurimucosum ATCC 700975] gi|262183473|ref|ZP_06042894.1| hypothetical protein CaurA7_05724 [Corynebacterium aurimucosum ATCC 700975] gi|227455057|gb|ACP33810.1| putative membrane protein [Corynebacterium aurimucosum ATCC 700975] Length=246 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 71/235 (31%), Positives = 96/235 (41%), Gaps = 8/235 (3%) Query 10 LPTEIYWRRRGLAL-GIAVVVVGIAVAIVIAFVDSSA-GAKPVSA---DKPASAQSHPGS 64 LP EIY RRR AL I V+V+ + A F S GA+ A D A++Q + Sbjct 11 LPREIYVRRRVAALVAILVLVIVLIWAATALFSGSEEPGAESQQAAASDTLATSQEATSA 70 Query 65 -PAPQAPQPAGQTEGNAAAAPPQG-QNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLT 122 ++ G TE + P +G Q+ E P+ A + V C L V T Sbjct 71 VETTESTAAEGSTEAPESTEPKEGEQDKEAPSSEAKPEELTVDPTKTTCSLQDLKVLAKT 130 Query 123 NAPQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSL-DNKRLWSNLDCAPSNETL 181 N P F + V N C D+ L VY + N+R+W++ DC S ET Sbjct 131 NEDSVPADKMPTFYLEVFNPTTADCSIDLDEEQLRFEVYKMGSNERVWADTDCYASVETG 190 Query 182 VKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFIL 236 +TF GE W+ S P R PG Y L +G S +PF L Sbjct 191 KQTFKSGETRYFQADWSRKRSEPGKCTDREDAEPGAYFLHSVIGENYSPALPFNL 245 >gi|306836891|ref|ZP_07469846.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] gi|304567232|gb|EFM42842.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] Length=236 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 68/240 (29%), Positives = 100/240 (42%), Gaps = 12/240 (5%) Query 4 LEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQSHPG 63 + PLP EIY RRR AL ++V+ +AV ++ A V + G S + + + Sbjct 1 MNQNKPLPEEIYKRRRVAAL---IIVIVLAVVLIWAAVAAFGGESDDSVAASSESSAATT 57 Query 64 SPAPQAPQPAGQTEGNAAAAPPQGQNPETPTPTAAVQPPP----VLKEGDDCPDSTLAVK 119 S + + + + E+ A + V D C L V+ Sbjct 58 SAETTSESSTTSADSTSESESESESASESEAKDGASESKEPEESVHAAKDTCSLEDLEVR 117 Query 120 GLTNAPQYYV--GDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSL-DNKRLWSNLDCAP 176 T+ Y V G+ PKF M VTN CK D+ L VY + DN+R+WS+ DC Sbjct 118 --TSMLNYSVPDGELPKFFMTVTNPTAADCKIDLDENSLRFEVYKMADNQRVWSDTDCYA 175 Query 177 SNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFIL 236 S +T +TF G+ + W+ S P RP PG Y +G+ S P F L Sbjct 176 SVQTGEQTFPAGKDLKFEAEWSRQASEPGKCTDRPTAEPGAYFAHTVIGDNSSPPQDFTL 235 >gi|134097047|ref|YP_001102708.1| hypothetical protein SACE_0434 [Saccharopolyspora erythraea NRRL 2338] gi|133909670|emb|CAL99782.1| hypothetical protein SACE_0434 [Saccharopolyspora erythraea NRRL 2338] Length=205 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 43/113 (39%), Positives = 57/113 (51%), Gaps = 2/113 (1%) Query 125 PQYYVGDQPKFTMVVTNIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLVKT 184 P++ +GD +VV N G +C RD + V + D + +W + DC + V Sbjct 90 PEFRLGDGVGLRIVVINDGDRACLRDTNRELRELRVTTPDGEHVWGSNDCYRESTNEVPL 149 Query 185 FSPGEQVTTAVTWTGMGSAPRCPLPRPAIGP-GTYNLVVQLGNLRSLPVPFIL 236 PG+ V V WTG SAP CP P + P G Y LV +LG L S PVPF L Sbjct 150 LRPGQSVHNDVLWTGERSAPECP-PTAEVAPAGEYLLVARLGGLTSRPVPFRL 201 Lambda K H 0.313 0.134 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 397943428394 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40