BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3595c Length=439 Score E Sequences producing significant alignments: (Bits) Value gi|57117130|ref|YP_177994.1| PE-PGRS family protein [Mycobacteri... 738 0.0 gi|294993715|ref|ZP_06799406.1| PE-PGRS family protein [Mycobact... 735 0.0 gi|313660595|ref|ZP_07817475.1| PE-PGRS family protein [Mycobact... 732 0.0 gi|297636271|ref|ZP_06954051.1| PE-PGRS family protein [Mycobact... 731 0.0 gi|31794772|ref|NP_857265.1| PE-PGRS family protein [Mycobacteri... 244 2e-62 gi|254552706|ref|ZP_05143153.1| PE-PGRS family protein [Mycobact... 222 9e-56 gi|254234165|ref|ZP_04927489.1| PE-PGRS family protein [Mycobact... 222 1e-55 gi|297733265|ref|ZP_06962383.1| PE-PGRS family protein [Mycobact... 222 1e-55 gi|148824043|ref|YP_001288797.1| PE-PGRS family protein [Mycobac... 160 5e-37 gi|339632862|ref|YP_004724504.1| PE-PGRS family protein [Mycobac... 159 7e-37 gi|297635466|ref|ZP_06953246.1| PE-PGRS family protein [Mycobact... 159 7e-37 gi|31794030|ref|NP_856523.1| PE-PGRS family protein [Mycobacteri... 159 7e-37 gi|340627846|ref|YP_004746298.1| PE-PGRS family protein [Mycobac... 159 1e-36 gi|339295694|gb|AEJ47805.1| PE_PGRS family protein [Mycobacteriu... 158 1e-36 gi|339299309|gb|AEJ51419.1| putative PE family protein [Mycobact... 158 2e-36 gi|289447790|ref|ZP_06437534.1| PE-PGRS family protein [Mycobact... 151 3e-34 gi|240167872|ref|ZP_04746531.1| PE-PGRS family protein [Mycobact... 150 5e-34 gi|339296212|gb|AEJ48323.1| hypothetical protein CCDC5079_3134 [... 149 1e-33 gi|340627170|ref|YP_004745622.1| PE-PGRS family protein [Mycobac... 147 3e-33 gi|297634751|ref|ZP_06952531.1| PE-PGRS family protein [Mycobact... 147 3e-33 gi|339632193|ref|YP_004723835.1| PE-PGRS family protein [Mycobac... 147 3e-33 gi|253798773|ref|YP_003031774.1| PE-PGRS family protein [Mycobac... 147 3e-33 gi|15841654|ref|NP_336691.1| PE_PGRS family protein [Mycobacteri... 147 3e-33 gi|339298700|gb|AEJ50810.1| PE-PGRS family protein [Mycobacteriu... 147 3e-33 gi|31793342|ref|NP_855835.1| hypothetical protein Mb2186c [Mycob... 147 4e-33 gi|183981183|ref|YP_001849474.1| PE-PGRS family protein [Mycobac... 146 7e-33 gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobac... 145 1e-32 gi|148824595|ref|YP_001289349.1| PE-PGRS family protein [Mycobac... 145 2e-32 gi|183984243|ref|YP_001852534.1| PE-PGRS family protein [Mycobac... 144 2e-32 gi|31793670|ref|NP_856163.1| hypothetical protein Mb2518c [Mycob... 144 2e-32 gi|121638372|ref|YP_978596.1| PE-PGRS family protein [Mycobacter... 144 3e-32 gi|15842981|ref|NP_338018.1| PE_PGRS family protein [Mycobacteri... 144 4e-32 gi|148663252|ref|YP_001284775.1| PE-PGRS family protein [Mycobac... 143 5e-32 gi|57117101|ref|YP_177968.1| PE-PGRS family protein [Mycobacteri... 143 7e-32 gi|183985067|ref|YP_001853358.1| PE-PGRS family protein [Mycobac... 138 2e-30 gi|339631131|ref|YP_004722773.1| PE-PGRS family protein [Mycobac... 137 3e-30 gi|339298994|gb|AEJ51104.1| PE-PGRS family protein [Mycobacteriu... 137 3e-30 gi|183984098|ref|YP_001852389.1| PE-PGRS family protein [Mycobac... 137 4e-30 gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobac... 135 1e-29 gi|15840502|ref|NP_335539.1| PE_PGRS family protein [Mycobacteri... 134 2e-29 gi|339297525|gb|AEJ49635.1| PE-PGRS family protein [Mycobacteriu... 132 1e-28 gi|121636997|ref|YP_977220.1| PE-PGRS family protein [Mycobacter... 131 2e-28 gi|57116793|ref|YP_177763.1| PE-PGRS family protein [Mycobacteri... 130 5e-28 gi|31792060|ref|NP_854553.1| PE-PGRS family protein [Mycobacteri... 129 7e-28 gi|15840285|ref|NP_335322.1| PE_PGRS family protein [Mycobacteri... 129 7e-28 gi|167967351|ref|ZP_02549628.1| PE_PGRS family protein [Mycobact... 126 9e-27 gi|121638368|ref|YP_978592.1| PE-PGRS family protein [Mycobacter... 125 1e-26 gi|339296193|gb|AEJ48304.1| hypothetical protein CCDC5079_3115 [... 125 1e-26 gi|57117098|ref|YP_177965.1| PE-PGRS family protein [Mycobacteri... 125 1e-26 gi|15842963|ref|NP_338000.1| PE_PGRS family protein [Mycobacteri... 125 1e-26 >gi|57117130|ref|YP_177994.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148824801|ref|YP_001289555.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|167968196|ref|ZP_02550473.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] 12 more sequence titles Length=439 Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust. Identities = 439/439 (100%), Positives = 439/439 (100%), Gaps = 0/439 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ Sbjct 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA Sbjct 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 Query 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG 180 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG Sbjct 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG 180 Query 181 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT 240 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT Sbjct 181 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT 240 Query 241 VPAGQGSMGNNGEPGGPGQPGTEFGQTGGTGGTGGTGLSVGGTGGTGGTGGTGGAGGSGG 300 VPAGQGSMGNNGEPGGPGQPGTEFGQTGGTGGTGGTGLSVGGTGGTGGTGGTGGAGGSGG Sbjct 241 VPAGQGSMGNNGEPGGPGQPGTEFGQTGGTGGTGGTGLSVGGTGGTGGTGGTGGAGGSGG 300 Query 301 RGGLLVGDGGAGGIGGTGGEGGIGARGGTGGQGGMGGAGQPGVGGDAGDGGNGGIGGDGG 360 RGGLLVGDGGAGGIGGTGGEGGIGARGGTGGQGGMGGAGQPGVGGDAGDGGNGGIGGDGG Sbjct 301 RGGLLVGDGGAGGIGGTGGEGGIGARGGTGGQGGMGGAGQPGVGGDAGDGGNGGIGGDGG 360 Query 361 AGGDGGAGGAGGAGGLFGVSGSSGLGGAAGSGGNGGGGGEPGVAGSPGVGPAGRGGDGNL 420 AGGDGGAGGAGGAGGLFGVSGSSGLGGAAGSGGNGGGGGEPGVAGSPGVGPAGRGGDGNL Sbjct 361 AGGDGGAGGAGGAGGLFGVSGSSGLGGAAGSGGNGGGGGEPGVAGSPGVGPAGRGGDGNL 420 Query 421 GQFGPEGAPGQPGQPGQPG 439 GQFGPEGAPGQPGQPGQPG Sbjct 421 GQFGPEGAPGQPGQPGQPG 439 >gi|294993715|ref|ZP_06799406.1| PE-PGRS family protein [Mycobacterium tuberculosis 210] Length=439 Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/439 (99%), Positives = 438/439 (99%), Gaps = 0/439 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ Sbjct 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA Sbjct 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 Query 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG 180 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG Sbjct 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG 180 Query 181 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT 240 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT Sbjct 181 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT 240 Query 241 VPAGQGSMGNNGEPGGPGQPGTEFGQTGGTGGTGGTGLSVGGTGGTGGTGGTGGAGGSGG 300 VPAGQGSMGNNGEPGGPGQPGTEFGQTGGTGGTGGTGLSVGGTGGTGGTGGTGGAGGSGG Sbjct 241 VPAGQGSMGNNGEPGGPGQPGTEFGQTGGTGGTGGTGLSVGGTGGTGGTGGTGGAGGSGG 300 Query 301 RGGLLVGDGGAGGIGGTGGEGGIGARGGTGGQGGMGGAGQPGVGGDAGDGGNGGIGGDGG 360 RGGLLVGDGGAGGIGGTGGEGGIGARGGTGGQGGMGGAGQPGVGGDAGDGGNGGIGGDGG Sbjct 301 RGGLLVGDGGAGGIGGTGGEGGIGARGGTGGQGGMGGAGQPGVGGDAGDGGNGGIGGDGG 360 Query 361 AGGDGGAGGAGGAGGLFGVSGSSGLGGAAGSGGNGGGGGEPGVAGSPGVGPAGRGGDGNL 420 AGGDGGAGGAGGA GLFGVSGSSGLGGAAGSGGNGGGGGEPGVAGSPGVGPAGRGGDGNL Sbjct 361 AGGDGGAGGAGGADGLFGVSGSSGLGGAAGSGGNGGGGGEPGVAGSPGVGPAGRGGDGNL 420 Query 421 GQFGPEGAPGQPGQPGQPG 439 GQFGPEGAPGQPGQPGQPG Sbjct 421 GQFGPEGAPGQPGQPGQPG 439 >gi|313660595|ref|ZP_07817475.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN V2475] Length=439 Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/439 (99%), Positives = 436/439 (99%), Gaps = 0/439 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ Sbjct 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA Sbjct 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 Query 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG 180 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG Sbjct 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG 180 Query 181 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT 240 QGGLLYGNGGAG NGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT Sbjct 181 QGGLLYGNGGAGXNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT 240 Query 241 VPAGQGSMGNNGEPGGPGQPGTEFGQTGGTGGTGGTGLSVGGTGGTGGTGGTGGAGGSGG 300 VPAGQGSMGNNGEPGGPGQPGTEFGQTGGTGGTGGTGLSVGGTGGTGGTGGTGGAGGSGG Sbjct 241 VPAGQGSMGNNGEPGGPGQPGTEFGQTGGTGGTGGTGLSVGGTGGTGGTGGTGGAGGSGG 300 Query 301 RGGLLVGDGGAGGIGGTGGEGGIGARGGTGGQGGMGGAGQPGVGGDAGDGGNGGIGGDGG 360 RGGLLVGDGGAGGIGGTGGEGGIGARGGTGG GMGGAGQPGVGGDAGDGGNGGIGGDGG Sbjct 301 RGGLLVGDGGAGGIGGTGGEGGIGARGGTGGXXGMGGAGQPGVGGDAGDGGNGGIGGDGG 360 Query 361 AGGDGGAGGAGGAGGLFGVSGSSGLGGAAGSGGNGGGGGEPGVAGSPGVGPAGRGGDGNL 420 AGGDGGAGGAGGAGGLFGVSGSSGLGGAAGSGGNGGGGGEPGVAGSPGVGPAGRGGDGNL Sbjct 361 AGGDGGAGGAGGAGGLFGVSGSSGLGGAAGSGGNGGGGGEPGVAGSPGVGPAGRGGDGNL 420 Query 421 GQFGPEGAPGQPGQPGQPG 439 GQFGPEGAPGQPGQPGQPG Sbjct 421 GQFGPEGAPGQPGQPGQPG 439 >gi|297636271|ref|ZP_06954051.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] Length=439 Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/439 (99%), Positives = 436/439 (99%), Gaps = 0/439 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ Sbjct 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA Sbjct 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 Query 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG 180 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG Sbjct 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG 180 Query 181 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT 240 QGGLLYGNGGAGGNGGAAT GNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT Sbjct 181 QGGLLYGNGGAGGNGGAATXXXGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT 240 Query 241 VPAGQGSMGNNGEPGGPGQPGTEFGQTGGTGGTGGTGLSVGGTGGTGGTGGTGGAGGSGG 300 VPAGQGSMGNNGEPGGPGQPGTEFGQTGGTGGTGGTGLSVGGTGGTGGTGGTGGAGGSGG Sbjct 241 VPAGQGSMGNNGEPGGPGQPGTEFGQTGGTGGTGGTGLSVGGTGGTGGTGGTGGAGGSGG 300 Query 301 RGGLLVGDGGAGGIGGTGGEGGIGARGGTGGQGGMGGAGQPGVGGDAGDGGNGGIGGDGG 360 RGGLLVGDGGAGGIGGTGGEGGIGARGGTGGQGGMGGAGQPGVGGDAGDGGNGGIGGDGG Sbjct 301 RGGLLVGDGGAGGIGGTGGEGGIGARGGTGGQGGMGGAGQPGVGGDAGDGGNGGIGGDGG 360 Query 361 AGGDGGAGGAGGAGGLFGVSGSSGLGGAAGSGGNGGGGGEPGVAGSPGVGPAGRGGDGNL 420 AGGDGGAGGAGGAGGLFGVSGSSGLGGAAGSGGNGGGGGEPGVAGSPGVGPAGRGGDGNL Sbjct 361 AGGDGGAGGAGGAGGLFGVSGSSGLGGAAGSGGNGGGGGEPGVAGSPGVGPAGRGGDGNL 420 Query 421 GQFGPEGAPGQPGQPGQPG 439 GQFGPEGAPGQPGQPGQPG Sbjct 421 GQFGPEGAPGQPGQPGQPG 439 >gi|31794772|ref|NP_857265.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|121639515|ref|YP_979739.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224992012|ref|YP_002646701.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31620369|emb|CAD95812.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] gi|121495163|emb|CAL73649.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224775127|dbj|BAH27933.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341603536|emb|CCC66217.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=492 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 257/258 (99%), Positives = 257/258 (99%), Gaps = 0/258 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ Sbjct 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA Sbjct 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 Query 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG 180 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG Sbjct 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG 180 Query 181 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT 240 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT Sbjct 181 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT 240 Query 241 VPAGQGSMGNNGEPGGPG 258 VPAGQGSMGNNGEPGGP Sbjct 241 VPAGQGSMGNNGEPGGPA 258 >gi|254552706|ref|ZP_05143153.1| PE-PGRS family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=348 Score = 222 bits (566), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 248/248 (100%), Positives = 248/248 (100%), Gaps = 0/248 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ Sbjct 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA Sbjct 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 Query 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG 180 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG Sbjct 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG 180 Query 181 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT 240 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT Sbjct 181 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT 240 Query 241 VPAGQGSM 248 VPAGQGSM Sbjct 241 VPAGQGSM 248 >gi|254234165|ref|ZP_04927489.1| PE-PGRS family protein [Mycobacterium tuberculosis C] gi|124603833|gb|EAY61796.1| PE-PGRS family protein [Mycobacterium tuberculosis C] Length=327 Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 248/248 (100%), Positives = 248/248 (100%), Gaps = 0/248 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ Sbjct 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA Sbjct 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 Query 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG 180 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG Sbjct 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG 180 Query 181 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT 240 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT Sbjct 181 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT 240 Query 241 VPAGQGSM 248 VPAGQGSM Sbjct 241 VPAGQGSM 248 >gi|297733265|ref|ZP_06962383.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506] Length=330 Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 248/248 (100%), Positives = 248/248 (100%), Gaps = 0/248 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ Sbjct 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA Sbjct 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 Query 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG 180 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG Sbjct 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGGSGG 180 Query 181 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT 240 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT Sbjct 181 QGGLLYGNGGAGGNGGAATIPGGNGGAGGAGGNAWLFGNGGAGGLGAAGAAGAAGVNPLT 240 Query 241 VPAGQGSM 248 VPAGQGSM Sbjct 241 VPAGQGSM 248 >gi|148824043|ref|YP_001288797.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|253798061|ref|YP_003031062.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|254232947|ref|ZP_04926274.1| PE-PGRS family protein [Mycobacterium tuberculosis C] 6 more sequence titles Length=663 Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 78/129 (61%), Positives = 100/129 (78%), Gaps = 2/129 (1%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 M +V+A P+ ++AAAT+LA +GS IS AN AA++PT V+AA AD+VS IAALFGAHA+ Sbjct 49 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 108 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQ--QSLLNAINAPTQALLGRPLIGD 118 +YQT+S QAA FH++FVQ L+ A +YA+ EAAN Q L+ INAP Q LLGRPLIG+ Sbjct 109 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 168 Query 119 GADGTAPGQ 127 GADG+ PGQ Sbjct 169 GADGSTPGQ 177 >gi|339632862|ref|YP_004724504.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339332218|emb|CCC27928.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=615 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 78/129 (61%), Positives = 100/129 (78%), Gaps = 2/129 (1%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 M +V+A P+ ++AAAT+LA +GS IS AN AA++PT V+AA AD+VS IAALFGAHA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQ--QSLLNAINAPTQALLGRPLIGD 118 +YQT+S QAA FH++FVQ L+ A +YA+ EAAN Q L+ INAP Q LLGRPLIG+ Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 119 GADGTAPGQ 127 GADG+ PGQ Sbjct 121 GADGSTPGQ 129 >gi|297635466|ref|ZP_06953246.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] gi|297732465|ref|ZP_06961583.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506] Length=615 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 78/129 (61%), Positives = 100/129 (78%), Gaps = 2/129 (1%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 M +V+A P+ ++AAAT+LA +GS IS AN AA++PT V+AA AD+VS IAALFGAHA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQ--QSLLNAINAPTQALLGRPLIGD 118 +YQT+S QAA FH++FVQ L+ A +YA+ EAAN Q L+ INAP Q LLGRPLIG+ Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 119 GADGTAPGQ 127 GADG+ PGQ Sbjct 121 GADGSTPGQ 129 >gi|31794030|ref|NP_856523.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31619624|emb|CAD95063.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=615 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 78/129 (61%), Positives = 100/129 (78%), Gaps = 2/129 (1%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 M +V+A P+ ++AAAT+LA +GS IS AN AA++PT V+AA AD+VS IAALFGAHA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQ--QSLLNAINAPTQALLGRPLIGD 118 +YQT+S QAA FH++FVQ L+ A +YA+ EAAN Q L+ INAP Q LLGRPLIG+ Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 119 GADGTAPGQ 127 GADG+ PGQ Sbjct 121 GADGSTPGQ 129 >gi|340627846|ref|YP_004746298.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340006036|emb|CCC45206.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=615 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 78/129 (61%), Positives = 100/129 (78%), Gaps = 2/129 (1%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 M +V+A P+ ++AAAT+LA +GS IS AN AA++PT V+AA AD+VS IAALFGAHA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQ--QSLLNAINAPTQALLGRPLIGD 118 +YQT+S QAA FH++FVQ L+ A +YA+ EAAN Q L+ INAP Q LLGRPLIG+ Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 119 GADGTAPGQ 127 GADG+ PGQ Sbjct 121 GADGSTPGQ 129 >gi|339295694|gb|AEJ47805.1| PE_PGRS family protein [Mycobacterium tuberculosis CCDC5079] Length=558 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 78/129 (61%), Positives = 100/129 (78%), Gaps = 2/129 (1%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 M +V+A P+ ++AAAT+LA +GS IS AN AA++PT V+AA AD+VS IAALFGAHA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQ--QSLLNAINAPTQALLGRPLIGD 118 +YQT+S QAA FH++FVQ L+ A +YA+ EAAN Q L+ INAP Q LLGRPLIG+ Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 119 GADGTAPGQ 127 GADG+ PGQ Sbjct 121 GADGSTPGQ 129 >gi|339299309|gb|AEJ51419.1| putative PE family protein [Mycobacterium tuberculosis CCDC5180] Length=479 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 78/129 (61%), Positives = 100/129 (78%), Gaps = 2/129 (1%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 M +V+A P+ ++AAAT+LA +GS IS AN AA++PT V+AA AD+VS IAALFGAHA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQ--QSLLNAINAPTQALLGRPLIGD 118 +YQT+S QAA FH++FVQ L+ A +YA+ EAAN Q L+ INAP Q LLGRPLIG+ Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 119 GADGTAPGQ 127 GADG+ PGQ Sbjct 121 GADGSTPGQ 129 >gi|289447790|ref|ZP_06437534.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A] gi|289420748|gb|EFD17949.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A] Length=621 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 92/121 (77%), Positives = 110/121 (91%), Gaps = 0/121 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIA PE ++AAATDLAN+GS+ISAA+AAA+ PT G+LAAGAD+VS AI+ALFG+HAQ Sbjct 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 YQT+SAQ A +H QFV+ L+AGAG+YA+AEAANVQQ+LLNAINAPTQ LLGRPLIG+GA Sbjct 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120 Query 121 D 121 D Sbjct 121 D 121 >gi|240167872|ref|ZP_04746531.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478] Length=477 Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 87/127 (69%), Positives = 103/127 (82%), Gaps = 0/127 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVI PE L+ A+ LA +GS IS ANAAA+ P TGVLAAGAD+VSAAIAA+F AH Q Sbjct 1 MSFVITSPEMLATASAQLAGIGSAISEANAAAAAPITGVLAAGADEVSAAIAAMFTAHGQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 AYQ ISAQA FH QFVQT++A A AYA+ E ANV+Q+LLNA+NAP+QAL GR LIG+G Sbjct 61 AYQAISAQAEAFHNQFVQTVAANAAAYASTEVANVEQTLLNAVNAPSQALTGRALIGNGV 120 Query 121 DGTAPGQ 127 +GT+PGQ Sbjct 121 NGTSPGQ 127 >gi|339296212|gb|AEJ48323.1| hypothetical protein CCDC5079_3134 [Mycobacterium tuberculosis CCDC5079] Length=731 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 108/161 (68%), Positives = 125/161 (78%), Gaps = 0/161 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIA PE L+AAATDLA + S ISAA AAA+ PT V AAGAD+VS AI+ALFG HAQ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 AYQ +SAQA FH QFVQ L++G YA AE+ V+Q +LNAINAPTQ L GRPLIGDGA Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120 Query 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLI 161 +GTA +G GGLL+GNGGNG AG+AGG+GG+AGLI Sbjct 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLI 161 >gi|340627170|ref|YP_004745622.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340005360|emb|CCC44518.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=526 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 92/121 (77%), Positives = 110/121 (91%), Gaps = 0/121 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIA PE ++AAATDLAN+GS+ISAA+AAA+ PT G+LAAGAD+VS AI+ALFG+HAQ Sbjct 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 YQT+SAQ A +H QFV+ L+AGAG+YA+AEAANVQQ+LLNAINAPTQ LLGRPLIG+GA Sbjct 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120 Query 121 D 121 D Sbjct 121 D 121 >gi|297634751|ref|ZP_06952531.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] Length=532 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 92/121 (77%), Positives = 110/121 (91%), Gaps = 0/121 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIA PE ++AAATDLAN+GS+ISAA+AAA+ PT G+LAAGAD+VS AI+ALFG+HAQ Sbjct 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 YQT+SAQ A +H QFV+ L+AGAG+YA+AEAANVQQ+LLNAINAPTQ LLGRPLIG+GA Sbjct 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120 Query 121 D 121 D Sbjct 121 D 121 >gi|339632193|ref|YP_004723835.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339331549|emb|CCC27245.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=526 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 92/121 (77%), Positives = 110/121 (91%), Gaps = 0/121 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIA PE ++AAATDLAN+GS+ISAA+AAA+ PT G+LAAGAD+VS AI+ALFG+HAQ Sbjct 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 YQT+SAQ A +H QFV+ L+AGAG+YA+AEAANVQQ+LLNAINAPTQ LLGRPLIG+GA Sbjct 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120 Query 121 D 121 D Sbjct 121 D 121 >gi|253798773|ref|YP_003031774.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|253320276|gb|ACT24879.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|328458536|gb|AEB03959.1| hypothetical protein TBSG_01830 [Mycobacterium tuberculosis KZN 4207] Length=532 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 92/121 (77%), Positives = 110/121 (91%), Gaps = 0/121 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIA PE ++AAATDLAN+GS+ISAA+AAA+ PT G+LAAGAD+VS AI+ALFG+HAQ Sbjct 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 YQT+SAQ A +H QFV+ L+AGAG+YA+AEAANVQQ+LLNAINAPTQ LLGRPLIG+GA Sbjct 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120 Query 121 D 121 D Sbjct 121 D 121 >gi|15841654|ref|NP_336691.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|57116953|ref|YP_177865.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148661978|ref|YP_001283501.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] 9 more sequence titles Length=532 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 92/121 (77%), Positives = 110/121 (91%), Gaps = 0/121 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIA PE ++AAATDLAN+GS+ISAA+AAA+ PT G+LAAGAD+VS AI+ALFG+HAQ Sbjct 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 YQT+SAQ A +H QFV+ L+AGAG+YA+AEAANVQQ+LLNAINAPTQ LLGRPLIG+GA Sbjct 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120 Query 121 D 121 D Sbjct 121 D 121 >gi|339298700|gb|AEJ50810.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180] Length=532 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 92/121 (77%), Positives = 110/121 (91%), Gaps = 0/121 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIA PE ++AAATDLAN+GS+ISAA+AAA+ PT G+LAAGAD+VS AI+ALFG+HAQ Sbjct 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 YQT+SAQ A +H QFV+ L+AGAG+YA+AEAANVQQ+LLNAINAPTQ LLGRPLIG+GA Sbjct 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120 Query 121 D 121 D Sbjct 121 D 121 >gi|31793342|ref|NP_855835.1| hypothetical protein Mb2186c [Mycobacterium bovis AF2122/97] gi|121638044|ref|YP_978268.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990538|ref|YP_002645225.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|31618934|emb|CAD97039.1| conserved hypothetical protein, PE_PGRS [Mycobacterium bovis AF2122/97] gi|121493692|emb|CAL72167.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773651|dbj|BAH26457.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341602082|emb|CCC64756.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=490 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 92/121 (77%), Positives = 110/121 (91%), Gaps = 0/121 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIA PE ++AAATDLAN+GS+ISAA+AAA+ PT G+LAAGAD+VS AI+ALFG+HAQ Sbjct 1 MSFVIAAPEVMAAAATDLANIGSSISAASAAAAGPTMGILAAGADEVSVAISALFGSHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 YQT+SAQ A +H QFV+ L+AGAG+YA+AEAANVQQ+LLNAINAPTQ LLGRPLIG+GA Sbjct 61 GYQTLSAQLAAYHNQFVRALNAGAGSYASAEAANVQQTLLNAINAPTQTLLGRPLIGNGA 120 Query 121 D 121 D Sbjct 121 D 121 >gi|183981183|ref|YP_001849474.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174509|gb|ACC39619.1| PE-PGRS family protein [Mycobacterium marinum M] Length=594 Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 83/142 (59%), Positives = 105/142 (74%), Gaps = 6/142 (4%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MS+V+A P+ ++ AA+ + N+G +SAANA A+ PTTGVLAA AD++S A+A++F HA Sbjct 1 MSYVLAAPDAMATAASSVTNIGGALSAANAMATAPTTGVLAAAADEISVAMASVFSDHAL 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAAN------VQQSLLNAINAPTQALLGRP 114 +YQ ++A+ A FH QFV L +GAGAY AE AN ++Q LL AINAPTQ LLGRP Sbjct 61 SYQQVAARMAAFHDQFVAALHSGAGAYLTAETANASPLGTLEQRLLQAINAPTQTLLGRP 120 Query 115 LIGDGADGTAPGQNGGAGGLLY 136 LIGDGA GTA NGGAGGLLY Sbjct 121 LIGDGAAGTATNPNGGAGGLLY 142 >gi|340627504|ref|YP_004745956.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340005694|emb|CCC44860.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=1660 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 96/125 (77%), Gaps = 2/125 (1%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MS+VIA PE ++ AA DLA +GS +SAA+A A++PTT V+AAGAD+VSA IAALF AHAQ Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAAN--VQQSLLNAINAPTQALLGRPLIGD 118 YQ +SAQAA FH QFV TL+A A Y E AN +++L A+NAPTQ LLGRPLIGD Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRAVLGAVNAPTQTLLGRPLIGD 120 Query 119 GADGT 123 GA GT Sbjct 121 GAHGT 125 >gi|148824595|ref|YP_001289349.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148723122|gb|ABR07747.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] Length=731 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 104/157 (67%), Positives = 121/157 (78%), Gaps = 0/157 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIA PE L+AAATDLA + S ISAA AAA+ PT V AAGAD+VS AI+ALFG HAQ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 AYQ +SAQA FH QFVQ L++G YA AE+ V+Q +LNAINAPTQ L GRPLIGDGA Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120 Query 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGA 157 +GTA +G GGLL+GNGGNG AG+AGG+GG+ Sbjct 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGS 157 >gi|183984243|ref|YP_001852534.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183177569|gb|ACC42679.1| PE-PGRS family protein [Mycobacterium marinum M] Length=670 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 92/142 (65%), Positives = 111/142 (79%), Gaps = 6/142 (4%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFV AVPE ++A ++LA +GS + ANAAA++PTTG+LAAGAD+VSAAIAALF HA Sbjct 1 MSFVFAVPETMAAVTSELATIGSNLEMANAAAALPTTGLLAAGADEVSAAIAALFDEHAL 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAAN------VQQSLLNAINAPTQALLGRP 114 YQTISAQA+ FHA+F+ L+ GAGAYA AEAAN +Q LNAINAP Q+L GRP Sbjct 61 GYQTISAQASAFHARFMSALNTGAGAYAAAEAANSSPLQALQDLTLNAINAPAQSLFGRP 120 Query 115 LIGDGADGTAPGQNGGAGGLLY 136 LIGDGA+ T PG NGGAGG+L+ Sbjct 121 LIGDGANATTPGGNGGAGGILW 142 >gi|31793670|ref|NP_856163.1| hypothetical protein Mb2518c [Mycobacterium bovis AF2122/97] gi|31619263|emb|CAD97379.1| PE-PGRS FAMILY PROTEIN [FIRST PART] [Mycobacterium bovis AF2122/97] Length=509 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 95/125 (76%), Gaps = 2/125 (1%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MS+VIA PE ++ AA DLA +GS +SAA+A A++PTT V+AAGAD+VSA IAALF AHAQ Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAAN--VQQSLLNAINAPTQALLGRPLIGD 118 YQ +SAQAA FH QFV TL+A A Y E AN + +L A+NAPTQ LLGRPLIGD Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120 Query 119 GADGT 123 GA GT Sbjct 121 GAHGT 125 >gi|121638372|ref|YP_978596.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990866|ref|YP_002645553.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121494020|emb|CAL72498.1| PE-PGRS family protein [first part] [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773979|dbj|BAH26785.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341602410|emb|CCC65086.1| PE-PGRS family protein [first part] [Mycobacterium bovis BCG str. Moreau RDJ] Length=475 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 80/125 (64%), Positives = 95/125 (76%), Gaps = 2/125 (1%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MS+VIA PE ++ AA DLA +GS +SAA+A A++PTT V+AAGAD+VSA IAALF AHAQ Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAAN--VQQSLLNAINAPTQALLGRPLIGD 118 YQ +SAQAA FH QFV TL+A A Y E AN + +L A+NAPTQ LLGRPLIGD Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120 Query 119 GADGT 123 GA GT Sbjct 121 GAHGT 125 >gi|15842981|ref|NP_338018.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13883320|gb|AAK47832.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=775 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 104/157 (67%), Positives = 121/157 (78%), Gaps = 0/157 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIA PE L+AAATDLA + S ISAA AAA+ PT V AAGAD+VS AI+ALFG HAQ Sbjct 45 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 104 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 AYQ +SAQA FH QFVQ L++G YA AE+ V+Q +LNAINAPTQ L GRPLIGDGA Sbjct 105 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 164 Query 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGA 157 +GTA +G GGLL+GNGGNG AG+AGG+GG+ Sbjct 165 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGS 201 >gi|148663252|ref|YP_001284775.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148507404|gb|ABQ75213.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=582 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 104/157 (67%), Positives = 121/157 (78%), Gaps = 0/157 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIA PE L+AAATDLA + S ISAA AAA+ PT V AAGAD+VS AI+ALFG HAQ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 AYQ +SAQA FH QFVQ L++G YA AE+ V+Q +LNAINAPTQ L GRPLIGDGA Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120 Query 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGA 157 +GTA +G GGLL+GNGGNG AG+AGG+GG+ Sbjct 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGS 157 >gi|57117101|ref|YP_177968.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|253800434|ref|YP_003033435.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|7441235|pir||C70974 hypothetical glycine-rich protein Rv3388 - Mycobacterium tuberculosis (strain H37RV) gi|38490366|emb|CAE55593.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|253321937|gb|ACT26540.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|328460166|gb|AEB05589.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] gi|344221227|gb|AEN01858.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=731 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 104/157 (67%), Positives = 121/157 (78%), Gaps = 0/157 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIA PE L+AAATDLA + S ISAA AAA+ PT V AAGAD+VS AI+ALFG HAQ Sbjct 1 MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 AYQ +SAQA FH QFVQ L++G YA AE+ V+Q +LNAINAPTQ L GRPLIGDGA Sbjct 61 AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA 120 Query 121 DGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGA 157 +GTA +G GGLL+GNGGNG AG+AGG+GG+ Sbjct 121 NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGS 157 >gi|183985067|ref|YP_001853358.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178393|gb|ACC43503.1| PE-PGRS family protein [Mycobacterium marinum M] Length=456 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 89/148 (61%), Positives = 104/148 (71%), Gaps = 6/148 (4%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 M V A PE ++AAATDLA +GS IS AN AA+ PTT VLAAGAD+VS +A+LF +AQ Sbjct 1 MPLVFATPEIIAAAATDLAQIGSAISGANTAAAAPTTEVLAAGADEVSTVVASLFSRYAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAAN------VQQSLLNAINAPTQALLGRP 114 AYQ + A A H QFVQ L+AGA YA E+AN VQQ +L INAPTQALLGR Sbjct 61 AYQVLGADMAAIHDQFVQALNAGANWYAGVESANSSTLQTVQQDVLGLINAPTQALLGRG 120 Query 115 LIGDGADGTAPGQNGGAGGLLYGNGGNG 142 LIGDGA GTA +G GG LYG+GG+G Sbjct 121 LIGDGAAGTASHPDGYDGGFLYGSGGSG 148 >gi|339631131|ref|YP_004722773.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339330487|emb|CCC26152.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=672 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 96/142 (68%), Positives = 110/142 (78%), Gaps = 0/142 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFV+ P L AAA D+A +GS ISAANAAA PT+ + AAGAD+VSAA+AALF AHA Sbjct 1 MSFVLVSPSQLMAAAADVAGIGSAISAANAAALAPTSVLAAAGADEVSAAVAALFSAHAG 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 YQ + A+AA FH QFVQ L+ A AYA+AEA NV+Q +L INAPTQAL GRPLIG+GA Sbjct 61 QYQQLGARAALFHEQFVQALTGAASAYASAEATNVEQQVLGLINAPTQALWGRPLIGNGA 120 Query 121 DGTAPGQNGGAGGLLYGNGGNG 142 DGTA NGGAGGLLY NGGNG Sbjct 121 DGTAANPNGGAGGLLYSNGGNG 142 >gi|339298994|gb|AEJ51104.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180] Length=1657 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 77/122 (64%), Positives = 92/122 (76%), Gaps = 2/122 (1%) Query 4 VIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQAYQ 63 +IA PE ++ AA DLA +GS +SAA+A A++PTT V+AAGAD+VSA IAALF AHAQ YQ Sbjct 1 MIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQEYQ 60 Query 64 TISAQAATFHAQFVQTLSAGAGAYANAEAAN--VQQSLLNAINAPTQALLGRPLIGDGAD 121 +SAQAA FH QFV TL+A A Y E AN + +L A+NAPTQ LLGRPLIGDGA Sbjct 61 ALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGDGAH 120 Query 122 GT 123 GT Sbjct 121 GT 122 >gi|183984098|ref|YP_001852389.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183177424|gb|ACC42534.1| PE-PGRS family protein [Mycobacterium marinum M] Length=467 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 75/128 (59%), Positives = 94/128 (74%), Gaps = 6/128 (4%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MS+ IAVP+ L+ AAT+L ++G+ +S AN AA++PTTG+LAAGADDVS AIAALF HAQ Sbjct 1 MSYFIAVPDELALAATELDSIGAALSVANVAAALPTTGILAAGADDVSTAIAALFAGHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAG------AGAYANAEAANVQQSLLNAINAPTQALLGRP 114 AYQ +S A+TFH QFV+ L+ A A + ++Q LL +NAPTQALLGRP Sbjct 61 AYQALSTAASTFHTQFVRALNLSGGAYAAADAANASPLQTLEQDLLGVLNAPTQALLGRP 120 Query 115 LIGDGADG 122 LIGDGADG Sbjct 121 LIGDGADG 128 >gi|340626105|ref|YP_004744557.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004295|emb|CCC43436.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=856 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/127 (70%), Positives = 101/127 (80%), Gaps = 6/127 (4%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MSFVIA PE L A A+DLA +GS ++ ANAA PTTG+LAAGAD+VS+AIAALFGAH Q Sbjct 1 MSFVIAAPEALVAVASDLAGIGSALAEANAAVLAPTTGLLAAGADEVSSAIAALFGAHGQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAA------NVQQSLLNAINAPTQALLGRP 114 AYQT+SAQA+ FHAQFVQ L+ G GAYA AEAA +V Q LL+ IN PTQALLGRP Sbjct 61 AYQTVSAQASAFHAQFVQALTGGGGAYAAAEAANVSAAQSVDQRLLDLINGPTQALLGRP 120 Query 115 LIGDGAD 121 LIGDGA+ Sbjct 121 LIGDGAN 127 >gi|15840502|ref|NP_335539.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13880677|gb|AAK45353.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=533 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/124 (63%), Positives = 97/124 (79%), Gaps = 0/124 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MS++IAVP+ LS+AA DLA++GS+I+A+ AA+ TT +L A AD+VSA IAALF H + Sbjct 7 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 66 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 YQ I+ Q A FH QF L++ AGAYA+AEA NV+Q +L INAPTQALLGRPLIG+GA Sbjct 67 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALLGRPLIGNGA 126 Query 121 DGTA 124 DGTA Sbjct 127 DGTA 130 >gi|339297525|gb|AEJ49635.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180] Length=650 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 122/194 (63%), Positives = 143/194 (74%), Gaps = 4/194 (2%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MS+V+A PE ++AAA +LA +GST+SAANAAA PTTGVLAAGAD+VSAA+A+LF HAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAAN---VQQSLLNAINAPTQALLGRPLIG 117 AYQT+ QAA FH +F+Q LS AGAY +AEAAN +QQ+L N INAPTQ LLGRPLIG Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQAL-NVINAPTQTLLGRPLIG 119 Query 118 DGADGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGG 177 +G +G G G L G G AGG+GG+AGLIG GG+GGAGGAGA GG Sbjct 120 NGTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGG 179 Query 178 SGGQGGLLYGNGGA 191 GG GG LYGNGGA Sbjct 180 VGGNGGWLYGNGGA 193 >gi|121636997|ref|YP_977220.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121492644|emb|CAL71113.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|341601013|emb|CCC63685.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=730 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 76/124 (62%), Positives = 96/124 (78%), Gaps = 0/124 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MS++IAVP+ LS+AA DLA++GS+I+A+ AA+ TT +L A AD+VSA IAALF H + Sbjct 1 MSYMIAVPDMLSSAAGDLASIGSSINASTRAAAAATTRLLPAAADEVSAHIAALFSGHGE 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 YQ I+ Q A FH QF L++ AGAYA+AEA NV+Q +L INAPTQAL GRPLIG+GA Sbjct 61 GYQAIARQMAAFHDQFTLALTSSAGAYASAEATNVEQQVLGLINAPTQALWGRPLIGNGA 120 Query 121 DGTA 124 DGTA Sbjct 121 DGTA 124 >gi|57116793|ref|YP_177763.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148660649|ref|YP_001282172.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|7476127|pir||H70816 hypothetical glycine-rich protein Rv0872c - Mycobacterium tuberculosis (strain H37RV) gi|38490245|emb|CAE55332.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148504801|gb|ABQ72610.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=606 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 122/194 (63%), Positives = 143/194 (74%), Gaps = 4/194 (2%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MS+V+A PE ++AAA +LA +GST+SAANAAA PTTGVLAAGAD+VSAA+A+LF HAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAAN---VQQSLLNAINAPTQALLGRPLIG 117 AYQT+ QAA FH +F+Q LS AGAY +AEAAN +QQ+L N INAPTQ LLGRPLIG Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQAL-NVINAPTQTLLGRPLIG 119 Query 118 DGADGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGG 177 +G +G G G L G G AGG+GG+AGLIG GG+GGAGGAGA GG Sbjct 120 NGTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGG 179 Query 178 SGGQGGLLYGNGGA 191 GG GG LYGNGGA Sbjct 180 VGGNGGWLYGNGGA 193 >gi|31792060|ref|NP_854553.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31617647|emb|CAD93757.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=608 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 122/194 (63%), Positives = 143/194 (74%), Gaps = 4/194 (2%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MS+V+A PE ++AAA +LA +GST+SAANAAA PTTGVLAAGAD+VSAA+A+LF HAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAAN---VQQSLLNAINAPTQALLGRPLIG 117 AYQT+ QAA FH +F+Q LS AGAY +AEAAN +QQ+L N INAPTQ LLGRPLIG Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQAL-NVINAPTQTLLGRPLIG 119 Query 118 DGADGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGG 177 +G +G G G L G G AGG+GG+AGLIG GG+GGAGGAGA GG Sbjct 120 NGTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGG 179 Query 178 SGGQGGLLYGNGGA 191 GG GG LYGNGGA Sbjct 180 VGGNGGWLYGNGGA 193 >gi|15840285|ref|NP_335322.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|121636795|ref|YP_977018.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148822080|ref|YP_001286834.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] 18 more sequence titles Length=609 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 122/194 (63%), Positives = 143/194 (74%), Gaps = 4/194 (2%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MS+V+A PE ++AAA +LA +GST+SAANAAA PTTGVLAAGAD+VSAA+A+LF HAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAAN---VQQSLLNAINAPTQALLGRPLIG 117 AYQT+ QAA FH +F+Q LS AGAY +AEAAN +QQ+L N INAPTQ LLGRPLIG Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQAL-NVINAPTQTLLGRPLIG 119 Query 118 DGADGTAPGQNGGAGGLLYGNGGNGAAGVNAGIAGGSGGAAGLIGNGGSGGAGGAGAAGG 177 +G +G G G L G G AGG+GG+AGLIG GG+GGAGGAGA GG Sbjct 120 NGTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGG 179 Query 178 SGGQGGLLYGNGGA 191 GG GG LYGNGGA Sbjct 180 VGGNGGWLYGNGGA 193 >gi|167967351|ref|ZP_02549628.1| PE_PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=591 Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 65/96 (68%), Positives = 76/96 (80%), Gaps = 0/96 (0%) Query 45 DDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAIN 104 D+VSAA+A+LF HA +YQ ++AQA H QFVQ L+ G+YA EAANVQQ+LLNAIN Sbjct 45 DEVSAALASLFSGHAVSYQQVAAQATALHDQFVQALTGAGGSYALTEAANVQQNLLNAIN 104 Query 105 APTQALLGRPLIGDGADGTAPGQNGGAGGLLYGNGG 140 APTQALLGRPLIGDGA GTA +G GGLL+GNGG Sbjct 105 APTQALLGRPLIGDGAVGTASSPDGQDGGLLFGNGG 140 >gi|121638368|ref|YP_978592.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990862|ref|YP_002645549.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121494016|emb|CAL72494.1| PE-PGRS family protein [first part] [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773975|dbj|BAH26781.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341602406|emb|CCC65082.1| PE-PGRS family protein [first part] [Mycobacterium bovis BCG str. Moreau RDJ] Length=527 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 90/131 (69%), Positives = 108/131 (83%), Gaps = 1/131 (0%) Query 1 MSFVIAVPEFLSAAATDLANLGSTISAANAAASIPTTGVLAAGADDVSAAIAALFGAHAQ 60 MS VIA P+ L+ AA DLA++GS +SAANAAA++PTT V+AA AD+VSAAIA LFGAHA+ Sbjct 1 MSLVIATPQLLATAALDLASIGSQVSAANAAAAMPTTEVVAAAADEVSAAIAGLFGAHAR 60 Query 61 AYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAINAPTQALLGRPLIGDGA 120 YQ +S Q A FH QFVQ L+A AG YA+ EAA V++SLL A+NAPT+ALLGRPLIG+GA Sbjct 61 QYQALSVQVAAFHEQFVQALTAAAGRYASTEAA-VERSLLGAVNAPTEALLGRPLIGNGA 119 Query 121 DGTAPGQNGGA 131 DGTAPGQ G A Sbjct 120 DGTAPGQPGAA 130 >gi|339296193|gb|AEJ48304.1| hypothetical protein CCDC5079_3115 [Mycobacterium tuberculosis CCDC5079] Length=592 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 65/96 (68%), Positives = 76/96 (80%), Gaps = 0/96 (0%) Query 45 DDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAIN 104 D+VSAA+A+LF HA +YQ ++AQA H QFVQ L+ G+YA EAANVQQ+LLNAIN Sbjct 46 DEVSAALASLFSGHAVSYQQVAAQATALHDQFVQALTGAGGSYALTEAANVQQNLLNAIN 105 Query 105 APTQALLGRPLIGDGADGTAPGQNGGAGGLLYGNGG 140 APTQALLGRPLIGDGA GTA +G GGLL+GNGG Sbjct 106 APTQALLGRPLIGDGAVGTASSPDGQDGGLLFGNGG 141 >gi|57117098|ref|YP_177965.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|7476149|pir||F70971 hypothetical glycine-rich protein Rv3367 - Mycobacterium tuberculosis (strain H37RV) gi|38490363|emb|CAE55590.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] Length=588 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 65/96 (68%), Positives = 76/96 (80%), Gaps = 0/96 (0%) Query 45 DDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAIN 104 D+VSAA+A+LF HA +YQ ++AQA H QFVQ L+ G+YA EAANVQQ+LLNAIN Sbjct 45 DEVSAALASLFSGHAVSYQQVAAQATALHDQFVQALTGAGGSYALTEAANVQQNLLNAIN 104 Query 105 APTQALLGRPLIGDGADGTAPGQNGGAGGLLYGNGG 140 APTQALLGRPLIGDGA GTA +G GGLL+GNGG Sbjct 105 APTQALLGRPLIGDGAVGTASSPDGQDGGLLFGNGG 140 >gi|15842963|ref|NP_338000.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13883301|gb|AAK47814.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=628 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 65/96 (68%), Positives = 76/96 (80%), Gaps = 0/96 (0%) Query 45 DDVSAAIAALFGAHAQAYQTISAQAATFHAQFVQTLSAGAGAYANAEAANVQQSLLNAIN 104 D+VSAA+A+LF HA +YQ ++AQA H QFVQ L+ G+YA EAANVQQ+LLNAIN Sbjct 82 DEVSAALASLFSGHAVSYQQVAAQATALHDQFVQALTGAGGSYALTEAANVQQNLLNAIN 141 Query 105 APTQALLGRPLIGDGADGTAPGQNGGAGGLLYGNGG 140 APTQALLGRPLIGDGA GTA +G GGLL+GNGG Sbjct 142 APTQALLGRPLIGDGAVGTASSPDGQDGGLLFGNGG 177 Lambda K H 0.307 0.139 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 900442926544 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40