BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3596c Length=848 Score E Sequences producing significant alignments: (Bits) Value gi|31794773|ref|NP_857266.1| ATP-dependent Clp protease ATP-bind... 1696 0.0 gi|15843209|ref|NP_338246.1| ATP-dependent Clp protease, ATP-bin... 1696 0.0 gi|339633595|ref|YP_004725237.1| ATP-dependent protease ATP-bind... 1692 0.0 gi|183985068|ref|YP_001853359.1| ATP-dependent protease ATP-bind... 1663 0.0 gi|41406559|ref|NP_959395.1| ClpC [Mycobacterium avium subsp. pa... 1655 0.0 gi|240172840|ref|ZP_04751499.1| ClpC [Mycobacterium kansasii ATC... 1640 0.0 gi|118619352|ref|YP_907684.1| ATP-dependent protease ATP-binding... 1620 0.0 gi|15827032|ref|NP_301295.1| ATP-dependent Clp protease [Mycobac... 1620 0.0 gi|254823225|ref|ZP_05228226.1| ATP-dependent protease ATP-bindi... 1620 0.0 gi|308232509|ref|ZP_07416289.2| ATP-dependent protease ATP-bindi... 1603 0.0 gi|342862442|ref|ZP_08719082.1| ATP-dependent protease ATP-bindi... 1600 0.0 gi|296166661|ref|ZP_06849087.1| ATP-dependent protease, ATPase s... 1593 0.0 gi|118466434|ref|YP_879836.1| negative regulator of genetic comp... 1585 0.0 gi|298527075|ref|ZP_07014484.1| conserved hypothetical protein [... 1582 0.0 gi|126437706|ref|YP_001073397.1| ATPase [Mycobacterium sp. JLS] ... 1575 0.0 gi|118472509|ref|YP_890312.1| negative regulator of genetic comp... 1575 0.0 gi|120406306|ref|YP_956135.1| ATPase [Mycobacterium vanbaalenii ... 1566 0.0 gi|108801719|ref|YP_641916.1| ATPase AAA-2 [Mycobacterium sp. MC... 1553 0.0 gi|315446238|ref|YP_004079117.1| ATPase with chaperone activity,... 1550 0.0 gi|145222022|ref|YP_001132700.1| ATPase [Mycobacterium gilvum PY... 1550 0.0 gi|262200860|ref|YP_003272068.1| ATPase AAA [Gordonia bronchiali... 1549 0.0 gi|343925825|ref|ZP_08765340.1| ATP-dependent Clp protease ATP-b... 1548 0.0 gi|325675027|ref|ZP_08154714.1| ATP-dependent Clp protease ATP-b... 1544 0.0 gi|111021395|ref|YP_704367.1| ATP-binding subunit of ATP-depende... 1543 0.0 gi|312138070|ref|YP_004005406.1| DNA binding ATP-dependent pepti... 1543 0.0 gi|226363749|ref|YP_002781531.1| ATP-dependent Clp protease ATP-... 1542 0.0 gi|169627650|ref|YP_001701299.1| ATP-dependent Clp protease ATP-... 1541 0.0 gi|226304135|ref|YP_002764093.1| ATP-dependent Clp protease ATP-... 1540 0.0 gi|333918015|ref|YP_004491596.1| chaperone activity ATPase [Amyc... 1537 0.0 gi|54022379|ref|YP_116621.1| putative Clp protease [Nocardia far... 1530 0.0 gi|333992525|ref|YP_004525139.1| ATP-dependent protease ATP-bind... 1529 0.0 gi|296138309|ref|YP_003645552.1| ATPase AAA [Tsukamurella paurom... 1506 0.0 gi|326383982|ref|ZP_08205665.1| ATPase AAA-2 domain-containing p... 1506 0.0 gi|257057497|ref|YP_003135329.1| ATPase with chaperone activity,... 1469 0.0 gi|302530766|ref|ZP_07283108.1| ATP-dependent chaperone ClpB [St... 1464 0.0 gi|256374490|ref|YP_003098150.1| ATPase AAA [Actinosynnema mirum... 1464 0.0 gi|134097027|ref|YP_001102688.1| putative ATP-dependent Clp prot... 1459 0.0 gi|331699829|ref|YP_004336068.1| ATPase [Pseudonocardia dioxaniv... 1454 0.0 gi|324998065|ref|ZP_08119177.1| putative ATP-dependent Clp prote... 1452 0.0 gi|302527020|ref|ZP_07279362.1| ATP-dependent chaperone ClpB [St... 1450 0.0 gi|317507816|ref|ZP_07965517.1| ATPase [Segniliparus rugosus ATC... 1448 0.0 gi|296392867|ref|YP_003657751.1| ATPase AAA [Segniliparus rotund... 1447 0.0 gi|319948880|ref|ZP_08022993.1| ATPase AAA-2 domain-containing p... 1447 0.0 gi|258651101|ref|YP_003200257.1| ATPase AAA-2 domain-containing ... 1437 0.0 gi|284989236|ref|YP_003407790.1| ATPase AAA-2 domain-containing ... 1425 0.0 gi|300790533|ref|YP_003770824.1| ATP-dependent Clp protease ATP-... 1421 0.0 gi|336180205|ref|YP_004585580.1| ATPase AAA-2 domain-containing ... 1389 0.0 gi|291303744|ref|YP_003515022.1| ATPase AAA-2 domain-containing ... 1380 0.0 gi|260578411|ref|ZP_05846325.1| ATP-dependent Clp protease, ATP-... 1377 0.0 gi|288920479|ref|ZP_06414787.1| ATPase AAA-2 domain protein [Fra... 1377 0.0 >gi|31794773|ref|NP_857266.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium bovis AF2122/97] gi|57117131|ref|YP_177995.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium tuberculosis H37Rv] gi|121639516|ref|YP_979740.1| putative ATP-dependent Clp protease ATP-binding subunit clpC [Mycobacterium bovis BCG str. Pasteur 1173P2] 37 more sequence titles Length=848 Score = 1696 bits (4393), Expect = 0.0, Method: Compositional matrix adjust. Identities = 848/848 (100%), Positives = 848/848 (100%), Gaps = 0/848 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE Sbjct 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD Sbjct 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH Sbjct 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE Sbjct 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSA 840 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSA Sbjct 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSA 840 Query 841 GGPEPAAR 848 GGPEPAAR Sbjct 841 GGPEPAAR 848 >gi|15843209|ref|NP_338246.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Mycobacterium tuberculosis CDC1551] gi|13883563|gb|AAK48060.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Mycobacterium tuberculosis CDC1551] Length=848 Score = 1696 bits (4392), Expect = 0.0, Method: Compositional matrix adjust. Identities = 847/848 (99%), Positives = 848/848 (100%), Gaps = 0/848 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRAR+VVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARKVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE Sbjct 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD Sbjct 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH Sbjct 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE Sbjct 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSA 840 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSA Sbjct 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSA 840 Query 841 GGPEPAAR 848 GGPEPAAR Sbjct 841 GGPEPAAR 848 >gi|339633595|ref|YP_004725237.1| ATP-dependent protease ATP-binding subunit CLPC1 [Mycobacterium africanum GM041182] gi|339332951|emb|CCC28678.1| putative ATP-dependent protease ATP-binding subunit CLPC1 [Mycobacterium africanum GM041182] Length=848 Score = 1692 bits (4383), Expect = 0.0, Method: Compositional matrix adjust. Identities = 847/848 (99%), Positives = 847/848 (99%), Gaps = 0/848 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAMEGKLDPVIGR KEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE Sbjct 181 AAMEGKLDPVIGRGKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD Sbjct 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH Sbjct 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE Sbjct 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSA 840 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSA Sbjct 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSA 840 Query 841 GGPEPAAR 848 GGPEPAAR Sbjct 841 GGPEPAAR 848 >gi|183985068|ref|YP_001853359.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium marinum M] gi|183178394|gb|ACC43504.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium marinum M] Length=848 Score = 1663 bits (4307), Expect = 0.0, Method: Compositional matrix adjust. Identities = 829/845 (99%), Positives = 836/845 (99%), Gaps = 0/845 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE Sbjct 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD+AMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIA+ARREKESAIDAQDFEKAASLRDREK LVAQRAEREKQWRSGDLDVVAEVD Sbjct 421 LREFDEKIADARREKESAIDAQDFEKAASLRDREKQLVAQRAEREKQWRSGDLDVVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTEAETTRLLRME+ELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLIFTSNLGTSDISKPVGLGFS+ GGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH Sbjct 661 VLIFTSNLGTSDISKPVGLGFSQTGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QLTR+EIIRMVDLMI RVA QLKSKDMAL LTD AK+LLAKRGFDPVLGARPLRRTIQRE Sbjct 721 QLTRDEIIRMVDLMIGRVANQLKSKDMALELTDKAKSLLAKRGFDPVLGARPLRRTIQRE 780 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSA 840 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEG GEDA FTFTGTRKPP+EPDLAKAGAHSA Sbjct 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGAGEDAKFTFTGTRKPPSEPDLAKAGAHSA 840 Query 841 GGPEP 845 GGP P Sbjct 841 GGPGP 845 >gi|41406559|ref|NP_959395.1| ClpC [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394908|gb|AAS02778.1| ClpC [Mycobacterium avium subsp. paratuberculosis K-10] Length=843 Score = 1655 bits (4285), Expect = 0.0, Method: Compositional matrix adjust. Identities = 824/840 (99%), Positives = 834/840 (99%), Gaps = 0/840 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHG+VPE Sbjct 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGQVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD+AMVAAATLADRYINDR+LPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSITDSAMVAAATLADRYINDRYLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIAEARREKESAIDAQDFEKAASLRDREK LVAQRAEREKQWRSGDLDVVAEVD Sbjct 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKQLVAQRAEREKQWRSGDLDVVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTEAETTRLLRME+ELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQG TVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGCTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLIFTSNLGTSDISKPVGLGF++GGGEN+YERMKQKVNDELKKHFRPEFLNRIDDIIVFH Sbjct 661 VLIFTSNLGTSDISKPVGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QLTR+EIIRMVDLMI+RVAGQLKSKDM LVLTD AKALLAKRGFDPVLGARPLRRTIQRE Sbjct 721 QLTRDEIIRMVDLMITRVAGQLKSKDMDLVLTDKAKALLAKRGFDPVLGARPLRRTIQRE 780 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSA 840 IEDQLSEKILFEEVGPGQ+VTVDVDNWDGE GEDAVFTFTGTRKPPAEPDLAKAGAHSA Sbjct 781 IEDQLSEKILFEEVGPGQIVTVDVDNWDGESAGEDAVFTFTGTRKPPAEPDLAKAGAHSA 840 >gi|240172840|ref|ZP_04751499.1| ClpC [Mycobacterium kansasii ATCC 12478] Length=848 Score = 1640 bits (4246), Expect = 0.0, Method: Compositional matrix adjust. Identities = 830/848 (98%), Positives = 839/848 (99%), Gaps = 0/848 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESG+PSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGTPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHG+VPE Sbjct 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGQVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD+AMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD Sbjct 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTEAETTRLLRME+ELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLIFTSNLGTSDISKPVGLGF+KGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH Sbjct 661 VLIFTSNLGTSDISKPVGLGFTKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QLTR+EII+MVDLMISRVAGQLKSKDMAL LTD AK+LLAKRGFDPVLGARPLRRTIQRE Sbjct 721 QLTRDEIIQMVDLMISRVAGQLKSKDMALELTDKAKSLLAKRGFDPVLGARPLRRTIQRE 780 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSA 840 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEG GEDAVFTFTG RKPPAEPDLAKAGAHSA Sbjct 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGAGEDAVFTFTGARKPPAEPDLAKAGAHSA 840 Query 841 GGPEPAAR 848 G A + Sbjct 841 DGSASAGQ 848 >gi|118619352|ref|YP_907684.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium ulcerans Agy99] gi|118571462|gb|ABL06213.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium ulcerans Agy99] Length=849 Score = 1620 bits (4196), Expect = 0.0, Method: Compositional matrix adjust. Identities = 827/846 (98%), Positives = 834/846 (99%), Gaps = 1/846 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE Sbjct 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD+AMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIA+ARREKESAIDAQDFEKAASLRDREK LVAQRAEREKQWRSGDLDVVAEVD Sbjct 421 LREFDEKIADARREKESAIDAQDFEKAASLRDREKQLVAQRAEREKQWRSGDLDVVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTEAETTRLLRME+ELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSV LFDEIEKAHQEI NSLLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVALFDEIEKAHQEISNSLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLIFTSNLGTSDISKPVGLGFS+ GGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH Sbjct 661 VLIFTSNLGTSDISKPVGLGFSQTGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 Query 721 QLTREEIIRMVDLMISRVAGQLK-SKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQR 779 QLTR+EIIRMVDLMI RVA QLK SKDMAL LTD AK+LLAKRGFDPVLGARPLRRTIQR Sbjct 721 QLTRDEIIRMVDLMIGRVANQLKSSKDMALELTDKAKSLLAKRGFDPVLGARPLRRTIQR 780 Query 780 EIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHS 839 EIEDQLSEKILFEEVGPGQVVTVDVDNWDGEG GEDA FTFTGTRKPP+EPDLAKAGAHS Sbjct 781 EIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGAGEDAKFTFTGTRKPPSEPDLAKAGAHS 840 Query 840 AGGPEP 845 AGGP P Sbjct 841 AGGPGP 846 >gi|15827032|ref|NP_301295.1| ATP-dependent Clp protease [Mycobacterium leprae TN] gi|221229510|ref|YP_002502926.1| putative ATP-dependent Clp protease [Mycobacterium leprae Br4923] gi|13432105|sp|P24428.2|CLPC_MYCLE RecName: Full=Probable ATP-dependent Clp protease ATP-binding subunit gi|13092579|emb|CAC29743.1| putative ATP-dependent Clp protease [Mycobacterium leprae] gi|219932617|emb|CAR70328.1| putative ATP-dependent Clp protease [Mycobacterium leprae Br4923] Length=848 Score = 1620 bits (4196), Expect = 0.0, Method: Compositional matrix adjust. Identities = 821/845 (98%), Positives = 830/845 (99%), Gaps = 0/845 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSL+SLGISLE VR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLDSLGISLEAVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVE+IIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEDIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAME KLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE Sbjct 181 AAMESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD+AMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIAEARREKESAIDAQDFEKAASLRDREK LVAQRAEREKQWRSGDLDV+AEVD Sbjct 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKQLVAQRAEREKQWRSGDLDVIAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLIFTSNLGTSDISKPVGLGF++G GENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH Sbjct 661 VLIFTSNLGTSDISKPVGLGFTQGSGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QL+R+EIIRMVDLMISRVA QLK KDM L LT+ AKALLAKRGFDPVLGARPLRRTIQRE Sbjct 721 QLSRDEIIRMVDLMISRVANQLKVKDMTLELTNKAKALLAKRGFDPVLGARPLRRTIQRE 780 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSA 840 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGED FTFTG RKP EPDLAKAG HSA Sbjct 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDVKFTFTGIRKPSTEPDLAKAGVHSA 840 Query 841 GGPEP 845 GGPEP Sbjct 841 GGPEP 845 >gi|254823225|ref|ZP_05228226.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium intracellulare ATCC 13950] Length=847 Score = 1620 bits (4195), Expect = 0.0, Method: Compositional matrix adjust. Identities = 825/846 (98%), Positives = 834/846 (99%), Gaps = 1/846 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE Sbjct 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD A+VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSITDPALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIA+ARREKESAIDAQDFEKAASLRDREK LVAQRAEREKQWRSGDLDVVAEVD Sbjct 421 LREFDEKIADARREKESAIDAQDFEKAASLRDREKQLVAQRAEREKQWRSGDLDVVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTEAETTRLLRME+ELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLIFTSNLGTSDISKPVGLGF++GGGEN+YERMKQKVNDELKKHFRPEFLNRIDDIIVFH Sbjct 661 VLIFTSNLGTSDISKPVGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QLTREEIIRMVDLMI RV QLKSKDMA+ LTD AKALLAKRGFDPVLGARPLRRTIQRE Sbjct 721 QLTREEIIRMVDLMIQRVGNQLKSKDMAMELTDKAKALLAKRGFDPVLGARPLRRTIQRE 780 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSA 840 IEDQLSEKILFEEVGPGQVVTVDVDNWDGE GEDA FTFTGTRKPPAEPDLAKAGAH+A Sbjct 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGESAGEDAKFTFTGTRKPPAEPDLAKAGAHAA 840 Query 841 -GGPEP 845 GP+P Sbjct 841 PQGPDP 846 >gi|308232509|ref|ZP_07416289.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium tuberculosis SUMu001] gi|308371394|ref|ZP_07424826.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium tuberculosis SUMu003] gi|308372592|ref|ZP_07429192.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium tuberculosis SUMu004] 15 more sequence titles Length=827 Score = 1603 bits (4150), Expect = 0.0, Method: Compositional matrix adjust. Identities = 827/827 (100%), Positives = 827/827 (100%), Gaps = 0/827 (0%) Query 22 MLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPFT 81 MLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPFT Sbjct 1 MLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPFT 60 Query 82 PRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQL 141 PRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQL Sbjct 61 PRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQL 120 Query 142 LSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERVM 201 LSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERVM Sbjct 121 LSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERVM 180 Query 202 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGSRY 261 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGSRY Sbjct 181 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGSRY 240 Query 262 RGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG 321 RGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG Sbjct 241 RGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG 300 Query 322 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAMVA 381 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAMVA Sbjct 301 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAMVA 360 Query 382 AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDA 441 AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDA Sbjct 361 AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDA 420 Query 442 QDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVDDEQIAEVLGNWTGIPVFKLTE 501 QDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVDDEQIAEVLGNWTGIPVFKLTE Sbjct 421 QDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVDDEQIAEVLGNWTGIPVFKLTE 480 Query 502 AETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTE 561 AETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTE Sbjct 481 AETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTE 540 Query 562 LSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSV 621 LSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSV Sbjct 541 LSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSV 600 Query 622 VLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKPVGLGF 681 VLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKPVGLGF Sbjct 601 VLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKPVGLGF 660 Query 682 SKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMISRVAGQ 741 SKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMISRVAGQ Sbjct 661 SKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMISRVAGQ 720 Query 742 LKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVT 801 LKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVT Sbjct 721 LKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVT 780 Query 802 VDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSAGGPEPAAR 848 VDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSAGGPEPAAR Sbjct 781 VDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSAGGPEPAAR 827 Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 41/71 (58%), Positives = 51/71 (72%), Gaps = 2/71 (2%) Query 5 FTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVE 64 FT RA++V+ L+ EA L HNYIGTEHILLGLI EGEGVAA+ L LG L VR QV Sbjct 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 118 Query 65 EIIG--QGQQA 73 +++ QG++A Sbjct 119 QLLSGYQGKEA 129 >gi|342862442|ref|ZP_08719082.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium colombiense CECT 3035] gi|342130113|gb|EGT83447.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium colombiense CECT 3035] Length=848 Score = 1600 bits (4142), Expect = 0.0, Method: Compositional matrix adjust. Identities = 826/848 (98%), Positives = 836/848 (99%), Gaps = 0/848 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHG+VPE Sbjct 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGQVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD AMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSITDGAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIAEARREKESAIDAQDFEKAASLRDREK LV QRAEREKQWRSGDLDVVAEVD Sbjct 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKQLVGQRAEREKQWRSGDLDVVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTEAETTRLLRME+ELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLIFTSNLGTSDISKPVGLGF++GGGEN+YERMKQKVNDELKKHFRPEFLNRIDDIIVFH Sbjct 661 VLIFTSNLGTSDISKPVGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QLT++EIIRMVDLMI+RVA QLKSKDMAL LTD AKALLAKRGFDPVLGARPLRRTIQRE Sbjct 721 QLTKDEIIRMVDLMINRVATQLKSKDMALELTDKAKALLAKRGFDPVLGARPLRRTIQRE 780 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSA 840 IEDQLSEKILFEEVGPGQVVTVDVD+WDGE GEDA FTFTGTRKPPAEPDLAKAGAHSA Sbjct 781 IEDQLSEKILFEEVGPGQVVTVDVDDWDGESAGEDAKFTFTGTRKPPAEPDLAKAGAHSA 840 Query 841 GGPEPAAR 848 G P P A+ Sbjct 841 GDPGPDAQ 848 >gi|296166661|ref|ZP_06849087.1| ATP-dependent protease, ATPase subunit [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897996|gb|EFG77576.1| ATP-dependent protease, ATPase subunit [Mycobacterium parascrofulaceum ATCC BAA-614] Length=844 Score = 1593 bits (4126), Expect = 0.0, Method: Compositional matrix adjust. Identities = 817/840 (98%), Positives = 832/840 (99%), Gaps = 0/840 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHG+VPE Sbjct 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGQVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSI+DAA+VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSISDAALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIA+ARREKESAIDAQDFEKAASLRDREK LVAQRAEREKQWRSGDLDVVAEVD Sbjct 421 LREFDEKIADARREKESAIDAQDFEKAASLRDREKQLVAQRAEREKQWRSGDLDVVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTEAETTRLLRME+ELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLIFTSNLGTSDISKPVGLGF++GGGEN+YERMKQKVNDELKKHFRPEFLNRIDDIIVFH Sbjct 661 VLIFTSNLGTSDISKPVGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QLT++EIIRMVDLMI+RV QLK+KDMA+ LTD AKALLAKRGFDPVLGARPLRRTIQRE Sbjct 721 QLTKDEIIRMVDLMITRVGNQLKAKDMAMELTDKAKALLAKRGFDPVLGARPLRRTIQRE 780 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSA 840 IEDQLSEKILFEEVGPGQ+VTVDVDNWDGE GEDAVFTFTG RKPPAEPDLAKAGAH+A Sbjct 781 IEDQLSEKILFEEVGPGQIVTVDVDNWDGESAGEDAVFTFTGARKPPAEPDLAKAGAHAA 840 >gi|118466434|ref|YP_879836.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium avium 104] gi|254773513|ref|ZP_05215029.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium avium subsp. avium ATCC 25291] gi|118167721|gb|ABK68618.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium avium 104] Length=822 Score = 1585 bits (4105), Expect = 0.0, Method: Compositional matrix adjust. Identities = 804/819 (99%), Positives = 814/819 (99%), Gaps = 0/819 (0%) Query 22 MLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPFT 81 MLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPFT Sbjct 1 MLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPFT 60 Query 82 PRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQL 141 PRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQL Sbjct 61 PRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQL 120 Query 142 LSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERVM 201 LSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERVM Sbjct 121 LSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERVM 180 Query 202 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGSRY 261 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHG+VPETLKDKQLYTLDLGSLVAGSRY Sbjct 181 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGQVPETLKDKQLYTLDLGSLVAGSRY 240 Query 262 RGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG 321 RGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG Sbjct 241 RGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG 300 Query 322 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAMVA 381 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITD+AMVA Sbjct 301 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAMVA 360 Query 382 AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDA 441 AATLADRYINDR+LPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDA Sbjct 361 AATLADRYINDRYLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDA 420 Query 442 QDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVDDEQIAEVLGNWTGIPVFKLTE 501 QDFEKAASLRDREK LVAQRAEREKQWRSGDLDVVAEVDDEQIAEVLGNWTGIPVFKLTE Sbjct 421 QDFEKAASLRDREKQLVAQRAEREKQWRSGDLDVVAEVDDEQIAEVLGNWTGIPVFKLTE 480 Query 502 AETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTE 561 AETTRLLRME+ELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTE Sbjct 481 AETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTE 540 Query 562 LSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSV 621 LSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSV Sbjct 541 LSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSV 600 Query 622 VLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKPVGLGF 681 VLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKPVGLGF Sbjct 601 VLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKPVGLGF 660 Query 682 SKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMISRVAGQ 741 ++GGGEN+YERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTR+EIIRMVDLMI+RVAGQ Sbjct 661 TQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTRDEIIRMVDLMITRVAGQ 720 Query 742 LKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVT 801 LKSKDM LVLTD AKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQ+VT Sbjct 721 LKSKDMDLVLTDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQIVT 780 Query 802 VDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSA 840 VDVDNWDGE GEDAVFTFTGTRKPPAEPDLAKAGAHSA Sbjct 781 VDVDNWDGESAGEDAVFTFTGTRKPPAEPDLAKAGAHSA 819 Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 41/71 (58%), Positives = 51/71 (72%), Gaps = 2/71 (2%) Query 5 FTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVE 64 FT RA++V+ L+ EA L HNYIGTEHILLGLI EGEGVAA+ L LG L VR QV Sbjct 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 118 Query 65 EIIG--QGQQA 73 +++ QG++A Sbjct 119 QLLSGYQGKEA 129 >gi|298527075|ref|ZP_07014484.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298496869|gb|EFI32163.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=848 Score = 1582 bits (4095), Expect = 0.0, Method: Compositional matrix adjust. Identities = 827/851 (98%), Positives = 831/851 (98%), Gaps = 6/851 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE Sbjct 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD Sbjct 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH Sbjct 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE Sbjct 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTG--TRKPP-AEPDLAKAGA 837 IEDQLSEKILFEEVGPGQVVTVDV NWDGEGPGEDA G +R+P P L + Sbjct 781 IEDQLSEKILFEEVGPGQVVTVDVYNWDGEGPGEDACSPSPGPASRRPSRIWPRLERT-- 838 Query 838 HSAGGPEPAAR 848 + GPEPAAR Sbjct 839 -ARAGPEPAAR 848 >gi|126437706|ref|YP_001073397.1| ATPase [Mycobacterium sp. JLS] gi|126237506|gb|ABO00907.1| ATPase AAA-2 domain protein [Mycobacterium sp. JLS] Length=847 Score = 1575 bits (4079), Expect = 0.0, Method: Compositional matrix adjust. Identities = 795/834 (96%), Positives = 817/834 (98%), Gaps = 2/834 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGAELTRVRQQVIQLLSGYQGKE+AEAGTGGRGGESG+PSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKESAEAGTGGRGGESGNPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE Sbjct 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD+AMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIA+ARREKESAIDAQDFEKAASLRD+EK LVAQRAEREKQWRSGDLDVVAEVD Sbjct 421 LREFDEKIADARREKESAIDAQDFEKAASLRDKEKQLVAQRAEREKQWRSGDLDVVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTE ETTRLLRME+ELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLIFTSNLGTSDISK VGLGF++GGGEN+YERMKQKVNDELKKHFRPEFLNRIDDIIVFH Sbjct 661 VLIFTSNLGTSDISKAVGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QLT++EII+MVDLMI RV QL++KDM + LTD AK+LLAKRGFDPVLGARPLRRTIQRE Sbjct 721 QLTQDEIIKMVDLMIGRVGNQLRAKDMTMELTDRAKSLLAKRGFDPVLGARPLRRTIQRE 780 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTG--TRKPPAEPDL 832 IEDQLSEKILFEE+GPGQ++TVDV+NWDG+G GEDA FTF+G R P EPDL Sbjct 781 IEDQLSEKILFEEIGPGQLITVDVENWDGQGAGEDAKFTFSGGPKRSEPVEPDL 834 >gi|118472509|ref|YP_890312.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium smegmatis str. MC2 155] gi|118173796|gb|ABK74692.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium smegmatis str. MC2 155] Length=848 Score = 1575 bits (4078), Expect = 0.0, Method: Compositional matrix adjust. Identities = 799/834 (96%), Positives = 817/834 (98%), Gaps = 2/834 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESG+PSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGNPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE Sbjct 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD+AMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIA+ARREKESAIDAQDFEKAA+LRD+EK LVAQRAEREKQWRSGDLDVVAEVD Sbjct 421 LREFDEKIADARREKESAIDAQDFEKAAALRDKEKQLVAQRAEREKQWRSGDLDVVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTE ETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLIFTSNLGTSDISK VGLGFS+GG EN+YERMKQKV+DELKKHFRPEFLNRIDDIIVFH Sbjct 661 VLIFTSNLGTSDISKAVGLGFSQGGSENNYERMKQKVHDELKKHFRPEFLNRIDDIIVFH 720 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QLT++EII+MVDLMI RV+ QLK+KDMAL L+D AKALLAKRGFDPVLGARPLRRTIQRE Sbjct 721 QLTQDEIIQMVDLMIGRVSNQLKTKDMALELSDKAKALLAKRGFDPVLGARPLRRTIQRE 780 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTG--TRKPPAEPDL 832 IEDQLSEKILFEE+GPGQ+VTVDV+ WDGEG GEDA FTF+G R AEPDL Sbjct 781 IEDQLSEKILFEEIGPGQLVTVDVEGWDGEGQGEDAKFTFSGGPKRAETAEPDL 834 >gi|120406306|ref|YP_956135.1| ATPase [Mycobacterium vanbaalenii PYR-1] gi|119959124|gb|ABM16129.1| ATPase AAA-2 domain protein [Mycobacterium vanbaalenii PYR-1] Length=847 Score = 1566 bits (4055), Expect = 0.0, Method: Compositional matrix adjust. Identities = 795/834 (96%), Positives = 816/834 (98%), Gaps = 2/834 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGAELTRVRQQVIQLLSGYQGKE AEAGTGGRGGE+G+PSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKETAEAGTGGRGGEAGNPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE Sbjct 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD+A+VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSITDSALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIA+ARREKESAIDAQDFEKAASLRD+EK LVAQRAEREKQWRSGDLDVVAEVD Sbjct 421 LREFDEKIADARREKESAIDAQDFEKAASLRDKEKQLVAQRAEREKQWRSGDLDVVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTE ETTRLLRME+ELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLIFTSNLGTSDISK VGLGF++GGGEN+YERMKQKV+DELKKHFRPEFLNRIDDIIVFH Sbjct 661 VLIFTSNLGTSDISKAVGLGFTQGGGENNYERMKQKVHDELKKHFRPEFLNRIDDIIVFH 720 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QLT++EII+MVDLMI RV+ QL +KDM + LTD AK+LLAKRGFDPVLGARPLRRTIQRE Sbjct 721 QLTQDEIIKMVDLMIGRVSKQLAAKDMTMELTDKAKSLLAKRGFDPVLGARPLRRTIQRE 780 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPA--EPDL 832 IEDQLSEKILFEEVGPGQ+VTVDV+ WDGEG GEDA FTF GT+KP EPDL Sbjct 781 IEDQLSEKILFEEVGPGQLVTVDVEGWDGEGAGEDAKFTFIGTKKPVKIEEPDL 834 >gi|108801719|ref|YP_641916.1| ATPase AAA-2 [Mycobacterium sp. MCS] gi|119870870|ref|YP_940822.1| ATPase [Mycobacterium sp. KMS] gi|108772138|gb|ABG10860.1| ATPase AAA-2 [Mycobacterium sp. MCS] gi|119696959|gb|ABL94032.1| ATPase AAA-2 domain protein [Mycobacterium sp. KMS] Length=847 Score = 1553 bits (4022), Expect = 0.0, Method: Compositional matrix adjust. Identities = 792/834 (95%), Positives = 815/834 (98%), Gaps = 2/834 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGAELTRVRQQVIQLLSGYQGKE+AEAGTGGRGGESG+PSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKESAEAGTGGRGGESGNPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHG+VPE Sbjct 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTV HTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVAHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD A+ AAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSITDGAIAAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIA+ARREKESAIDAQDFEKAASLRD+EKTLVAQRAEREKQWRSGDLDVVAEVD Sbjct 421 LREFDEKIADARREKESAIDAQDFEKAASLRDKEKTLVAQRAEREKQWRSGDLDVVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTE ETTRLLRME+ELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLIFTSNLGTSDISK VGLGF++GGGEN+YERMKQKVNDELKKHFRPEFLNRIDDIIVFH Sbjct 661 VLIFTSNLGTSDISKAVGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QLT++EII+MVDLMI RV QL++KDM + LTD AK+LLAKRGFDPVLGARPLRRTIQRE Sbjct 721 QLTQDEIIKMVDLMIGRVGNQLRAKDMTMELTDKAKSLLAKRGFDPVLGARPLRRTIQRE 780 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTG--TRKPPAEPDL 832 IEDQLSEKILFEE+GPGQ++TVDV+NWDG+G GEDA FTF+G R P EPDL Sbjct 781 IEDQLSEKILFEEIGPGQLITVDVENWDGQGAGEDAKFTFSGGPKRSEPVEPDL 834 >gi|315446238|ref|YP_004079117.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium sp. Spyr1] gi|315264541|gb|ADU01283.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium sp. Spyr1] Length=847 Score = 1550 bits (4013), Expect = 0.0, Method: Compositional matrix adjust. Identities = 795/834 (96%), Positives = 816/834 (98%), Gaps = 2/834 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGAELTRVRQQVIQLLSGYQGKE AEAGTGGRGGE+G+PSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKETAEAGTGGRGGEAGNPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHG+VPE Sbjct 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTV HTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVAHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD A+ AAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSITDGAIAAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIA+ARREKESAIDAQDFEKAASLRD+EK LVAQRAEREKQWRSGDLDVVAEVD Sbjct 421 LREFDEKIADARREKESAIDAQDFEKAASLRDKEKQLVAQRAEREKQWRSGDLDVVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTE ETTRLLRME+ELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLIFTSNLGTSDISK VGLGF++GGG+N+YERMKQKV+DELKKHFRPEFLNRIDDIIVFH Sbjct 661 VLIFTSNLGTSDISKAVGLGFTQGGGDNNYERMKQKVHDELKKHFRPEFLNRIDDIIVFH 720 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QLT++EII+MVDLMI RV QLK+KDMA+ LT AKALLAKRGFDPVLGARPLRRTIQRE Sbjct 721 QLTQDEIIQMVDLMIGRVGNQLKAKDMAMELTPKAKALLAKRGFDPVLGARPLRRTIQRE 780 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKP--PAEPDL 832 IEDQLSEKILFEE+GPGQ+VTVDV+NWDGEG GEDAVFTF+G RKP AEPDL Sbjct 781 IEDQLSEKILFEELGPGQLVTVDVENWDGEGQGEDAVFTFSGARKPVEVAEPDL 834 >gi|145222022|ref|YP_001132700.1| ATPase [Mycobacterium gilvum PYR-GCK] gi|145214508|gb|ABP43912.1| ATPase AAA-2 domain protein [Mycobacterium gilvum PYR-GCK] Length=847 Score = 1550 bits (4013), Expect = 0.0, Method: Compositional matrix adjust. Identities = 795/834 (96%), Positives = 816/834 (98%), Gaps = 2/834 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGAELTRVRQQVIQLLSGYQG+E AEAGTGGRGGE+G+PSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGAELTRVRQQVIQLLSGYQGRETAEAGTGGRGGEAGNPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHG+VPE Sbjct 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTV HTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVAHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD A+ AAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSITDGAIAAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIA+ARREKESAIDAQDFEKAASLRD+EK LVAQRAEREKQWRSGDLDVVAEVD Sbjct 421 LREFDEKIADARREKESAIDAQDFEKAASLRDKEKQLVAQRAEREKQWRSGDLDVVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTE ETTRLLRME+ELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLIFTSNLGTSDISK VGLGF++GGGEN+YERMKQKV+DELKKHFRPEFLNRIDDIIVFH Sbjct 661 VLIFTSNLGTSDISKAVGLGFTQGGGENNYERMKQKVHDELKKHFRPEFLNRIDDIIVFH 720 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QLT++EII+MVDLMI RV QLK+KDMA+ LT AKALLAKRGFDPVLGARPLRRTIQRE Sbjct 721 QLTQDEIIQMVDLMIGRVGNQLKAKDMAMELTPKAKALLAKRGFDPVLGARPLRRTIQRE 780 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKP--PAEPDL 832 IEDQLSEKILFEE+GPGQ+VTVDV+NWDGEG GEDAVFTF+G RKP AEPDL Sbjct 781 IEDQLSEKILFEELGPGQLVTVDVENWDGEGQGEDAVFTFSGARKPVEVAEPDL 834 >gi|262200860|ref|YP_003272068.1| ATPase AAA [Gordonia bronchialis DSM 43247] gi|262084207|gb|ACY20175.1| ATPase AAA-2 domain protein [Gordonia bronchialis DSM 43247] Length=848 Score = 1549 bits (4011), Expect = 0.0, Method: Compositional matrix adjust. Identities = 779/851 (92%), Positives = 810/851 (96%), Gaps = 8/851 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAK+LESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGA+L RVRQQVIQLLSGYQGKE EAGTGGR ESG+PSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGADLNRVRQQVIQLLSGYQGKEPQEAGTGGRSSESGTPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AA EGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIV+G+VPE Sbjct 181 AAGEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGQVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP+VEHTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYE+HHRVSITD A+VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYESHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDE+IA+AR+EKESAIDAQDFEKAASLRD+EK LVA+RAEREKQWRSGD+DVVAEVD Sbjct 421 LREFDERIADARKEKESAIDAQDFEKAASLRDKEKQLVAERAEREKQWRSGDMDVVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTE ETTRLLRME+ELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFG+DDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAH EIYN+LLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKG-GGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVF 719 VLIFTSNLGTSDISK VGLGF+KG +++YERMK KVNDELKKHFRPEFLNRIDD+IVF Sbjct 661 VLIFTSNLGTSDISKAVGLGFTKGDDSQSNYERMKLKVNDELKKHFRPEFLNRIDDVIVF 720 Query 720 HQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQR 779 HQLTR+EII+MVDLMI+RV QLK+KDMAL LTD AKALLAKRGFDPVLGARPLRRTIQR Sbjct 721 HQLTRDEIIQMVDLMINRVETQLKNKDMALELTDRAKALLAKRGFDPVLGARPLRRTIQR 780 Query 780 EIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPD----LAKA 835 EIEDQLSEKILF E+G GQ+V VDV+ WDGE GEDA FTFTG+ KP PD L KA Sbjct 781 EIEDQLSEKILFNEIGAGQIVLVDVEGWDGEDDGEDAKFTFTGSEKPREFPDAPVELTKA 840 Query 836 GAHSAGGPEPA 846 G GG E + Sbjct 841 G---EGGSESS 848 >gi|343925825|ref|ZP_08765340.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia alkanivorans NBRC 16433] gi|343764176|dbj|GAA12266.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia alkanivorans NBRC 16433] Length=848 Score = 1548 bits (4009), Expect = 0.0, Method: Compositional matrix adjust. Identities = 772/841 (92%), Positives = 807/841 (96%), Gaps = 5/841 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAK+LESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGA+L RVRQQVIQLLSGYQGKE EAGTGGR ESG+PSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGADLNRVRQQVIQLLSGYQGKEPQEAGTGGRSSESGTPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AA EGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIV+G+VPE Sbjct 181 AAAEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGQVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP+VEHTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYE+HHRVSITD A+VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYESHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFD++IA+AR+EKESAIDAQDFEKAASLRD+EK LVA+RAEREKQWRSGD+D+VAEVD Sbjct 421 LREFDDRIADARKEKESAIDAQDFEKAASLRDKEKQLVAERAEREKQWRSGDMDIVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTE ETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFG+DDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAH EIYN+LLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGF-SKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVF 719 VLIFTSNLGTSDISK VG+GF SK ++ YERMKQKVNDELKKHFRPEFLNRIDDI+VF Sbjct 661 VLIFTSNLGTSDISKAVGMGFSSKDDTKSGYERMKQKVNDELKKHFRPEFLNRIDDIVVF 720 Query 720 HQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQR 779 HQLTR+EII+MVDLM++RV LK+KDMAL +TD AK+LLAKRGFDPVLGARPLRRTIQR Sbjct 721 HQLTRDEIIQMVDLMLTRVESALKNKDMALEVTDRAKSLLAKRGFDPVLGARPLRRTIQR 780 Query 780 EIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPD----LAKA 835 EIEDQLSEKILF ++ PGQ+V VDV+ WDGEG GEDA FTFTG+ KP A PD L+KA Sbjct 781 EIEDQLSEKILFGDIAPGQIVLVDVEGWDGEGDGEDAKFTFTGSEKPRAVPDAPVELSKA 840 Query 836 G 836 G Sbjct 841 G 841 >gi|325675027|ref|ZP_08154714.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus equi ATCC 33707] gi|325554613|gb|EGD24288.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus equi ATCC 33707] Length=851 Score = 1544 bits (3997), Expect = 0.0, Method: Compositional matrix adjust. Identities = 775/847 (92%), Positives = 805/847 (96%), Gaps = 3/847 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGA+L RVRQQVIQLLSGYQGKE AEAG G GE+G+PSTSLVLDQFGRNLT Sbjct 121 AQVLVKLGADLNRVRQQVIQLLSGYQGKEPAEAG--GSRGEAGTPSTSLVLDQFGRNLTQ 178 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AA+EGKLDPVIGR KEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIV+GEVPE Sbjct 179 AALEGKLDPVIGRSKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPE 238 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 239 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 298 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 299 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 358 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD+A+VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 359 GLRDRYEAHHRVSITDSALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 418 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFD+KIA+ARREKESAIDAQDFEKAA+LRD+EKTLVAQRAEREKQWRSGDLDV+AEVD Sbjct 419 LREFDDKIADARREKESAIDAQDFEKAANLRDKEKTLVAQRAEREKQWRSGDLDVIAEVD 478 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTE ETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 479 DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 538 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFG+DDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 539 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPG 598 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYN+LLQVLEDGRLTDGQGRTVDFKNT Sbjct 599 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNT 658 Query 661 VLIFTSNLGTSDISKPVGLGFSKG-GGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVF 719 VLIFTSNLGTSDISK VGLGFS G G E++YERMK KV+DELKKHFRPEFLNRIDDIIVF Sbjct 659 VLIFTSNLGTSDISKAVGLGFSAGTGSESNYERMKLKVHDELKKHFRPEFLNRIDDIIVF 718 Query 720 HQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQR 779 HQL++ EII+MVDLMI RV QLK+KDM + LT+ AK+LLAKRGFDPVLGARPLRRTIQR Sbjct 719 HQLSQNEIIQMVDLMIGRVEAQLKNKDMDIELTEQAKSLLAKRGFDPVLGARPLRRTIQR 778 Query 780 EIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHS 839 EIEDQLSEKILF E+GPGQ+V VDV+ WDGEG GE+A FTF G+ KP PD Sbjct 779 EIEDQLSEKILFNELGPGQIVLVDVEGWDGEGAGENAKFTFHGSPKPVKVPDSPAEALAG 838 Query 840 AGGPEPA 846 AG P+ Sbjct 839 AGDSTPS 845 >gi|111021395|ref|YP_704367.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus jostii RHA1] gi|110820925|gb|ABG96209.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus jostii RHA1] Length=845 Score = 1543 bits (3996), Expect = 0.0, Method: Compositional matrix adjust. Identities = 773/843 (92%), Positives = 806/843 (96%), Gaps = 8/843 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGA+L RVRQQVIQLLSGYQGKE AEAG G GE+G+PSTSLVLDQFGRNLT Sbjct 121 AQVLVKLGADLNRVRQQVIQLLSGYQGKEPAEAG--GTRGEAGTPSTSLVLDQFGRNLTQ 178 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AA+EGKLDPVIGR KEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIV+GEVPE Sbjct 179 AALEGKLDPVIGRSKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPE 238 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 239 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 298 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 299 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 358 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD A+VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 359 GLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 418 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFD+KIA+ARREKESAIDAQDFEKAA+LRD+EKTLVAQRAEREKQWRSGDLDV+AEVD Sbjct 419 LREFDDKIADARREKESAIDAQDFEKAANLRDKEKTLVAQRAEREKQWRSGDLDVIAEVD 478 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTE ETTRLLRMEEELHKRIIGQEDAVKAV+KAIRRTRAGLK Sbjct 479 DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVAKAIRRTRAGLK 538 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTEL+K+LANFLFG+DDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 539 DPKRPSGSFIFAGPSGVGKTELAKSLANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPG 598 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYN+LLQVLEDGRLTDGQGRTVDFKNT Sbjct 599 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNT 658 Query 661 VLIFTSNLGTSDISKPVGLGFSKG-GGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVF 719 VLIFTSNLGTSDISK VGLGF+ G G E++YERMK KV+DELKKHFRPEFLNRIDDI+VF Sbjct 659 VLIFTSNLGTSDISKAVGLGFTSGKGDESNYERMKLKVHDELKKHFRPEFLNRIDDIVVF 718 Query 720 HQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQR 779 HQLT E+I++MVDLM++RV LK+KDM + +TD AK+LLAKRGFDPVLGARPLRRTIQR Sbjct 719 HQLTTEQIVQMVDLMVARVEVALKNKDMTMEVTDKAKSLLAKRGFDPVLGARPLRRTIQR 778 Query 780 EIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEP-----DLAK 834 EIEDQLSEKILF EVGPGQ+V VDV+NWDGEG GEDA FTF G KP P DLAK Sbjct 779 EIEDQLSEKILFGEVGPGQIVYVDVENWDGEGAGEDAKFTFRGETKPVTVPDEVPVDLAK 838 Query 835 AGA 837 +GA Sbjct 839 SGA 841 >gi|312138070|ref|YP_004005406.1| DNA binding ATP-dependent peptidase [Rhodococcus equi 103S] gi|311887409|emb|CBH46721.1| putative DNA binding ATP-dependent peptidase [Rhodococcus equi 103S] Length=851 Score = 1543 bits (3995), Expect = 0.0, Method: Compositional matrix adjust. Identities = 775/847 (92%), Positives = 804/847 (95%), Gaps = 3/847 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGA+L RVRQQVIQLLSGYQGKE AEAG G GE+G+PSTSLVLDQFGRNLT Sbjct 121 AQVLVKLGADLNRVRQQVIQLLSGYQGKEPAEAG--GSRGEAGTPSTSLVLDQFGRNLTQ 178 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AA+EGKLDPVIGR KEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIV+GEVPE Sbjct 179 AALEGKLDPVIGRSKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPE 238 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 239 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 298 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 299 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 358 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD+A+VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 359 GLRDRYEAHHRVSITDSALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 418 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFD+KIA+ARREKESAIDAQDFEKAA+LRD+EKTLVAQRAEREKQWRSGDLDV+AEVD Sbjct 419 LREFDDKIADARREKESAIDAQDFEKAANLRDKEKTLVAQRAEREKQWRSGDLDVIAEVD 478 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTE ETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 479 DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 538 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFG+DDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 539 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPG 598 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYN+LLQVLEDGRLTDGQGRTVDFKNT Sbjct 599 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNT 658 Query 661 VLIFTSNLGTSDISKPVGLGFSKG-GGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVF 719 VLIFTSNLGTSDISK VGLGFS G G E++YERMK KV+DELKKHFRPEFLNRIDDIIVF Sbjct 659 VLIFTSNLGTSDISKAVGLGFSAGTGSESNYERMKLKVHDELKKHFRPEFLNRIDDIIVF 718 Query 720 HQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQR 779 HQL++ EII MVDLMI RV QLK+KDM + LT+ AK+LLAKRGFDPVLGARPLRRTIQR Sbjct 719 HQLSQNEIIEMVDLMIGRVEAQLKNKDMDIELTEQAKSLLAKRGFDPVLGARPLRRTIQR 778 Query 780 EIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHS 839 EIEDQLSEKILF E+GPGQ+V VDV+ WDGEG GE+A FTF G+ KP PD Sbjct 779 EIEDQLSEKILFNELGPGQIVLVDVEGWDGEGAGENAKFTFHGSPKPVKVPDSPAEALAG 838 Query 840 AGGPEPA 846 AG P+ Sbjct 839 AGDSTPS 845 >gi|226363749|ref|YP_002781531.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus opacus B4] gi|226242238|dbj|BAH52586.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus opacus B4] Length=845 Score = 1542 bits (3993), Expect = 0.0, Method: Compositional matrix adjust. Identities = 772/843 (92%), Positives = 806/843 (96%), Gaps = 8/843 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGA+L RVRQQVIQLLSGYQGKE AE +GG GE+G+PSTSLVLDQFGRNLT Sbjct 121 AQVLVKLGADLNRVRQQVIQLLSGYQGKEPAE--SGGTRGEAGTPSTSLVLDQFGRNLTQ 178 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AA+EGKLDPVIGR KEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIV+GEVPE Sbjct 179 AALEGKLDPVIGRSKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPE 238 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 239 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 298 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 299 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 358 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD A+VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 359 GLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 418 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFD+KIA+ARREKESAIDAQDFEKAA+LRD+EKTLVAQRAEREKQWRSGDLDV+AEVD Sbjct 419 LREFDDKIADARREKESAIDAQDFEKAANLRDKEKTLVAQRAEREKQWRSGDLDVIAEVD 478 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTE ETTRLLRMEEELHKRIIGQEDAVKAV+KAIRRTRAGLK Sbjct 479 DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVAKAIRRTRAGLK 538 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTEL+K+LANFLFG+DDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 539 DPKRPSGSFIFAGPSGVGKTELAKSLANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPG 598 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYN+LLQVLEDGRLTDGQGRTVDFKNT Sbjct 599 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNT 658 Query 661 VLIFTSNLGTSDISKPVGLGFSKG-GGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVF 719 VLIFTSNLGTSDISK VGLGF+ G G E++YERMK KV+DELKKHFRPEFLNRIDDI+VF Sbjct 659 VLIFTSNLGTSDISKAVGLGFTSGKGDESNYERMKLKVHDELKKHFRPEFLNRIDDIVVF 718 Query 720 HQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQR 779 HQLT E+I++MVDLM++RV LK+KDM + +++ AKALLAKRGFDPVLGARPLRRTIQR Sbjct 719 HQLTTEQIVQMVDLMVARVEVALKNKDMTMEVSEKAKALLAKRGFDPVLGARPLRRTIQR 778 Query 780 EIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEP-----DLAK 834 EIEDQLSEKILF EVGPGQ+V VDVDNWDGEG GEDA FTF G KP P DLAK Sbjct 779 EIEDQLSEKILFGEVGPGQIVYVDVDNWDGEGAGEDAKFTFRGEAKPVTVPDEVPVDLAK 838 Query 835 AGA 837 +GA Sbjct 839 SGA 841 >gi|169627650|ref|YP_001701299.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium abscessus ATCC 19977] gi|169239617|emb|CAM60645.1| Probable ATP-dependent Clp protease ATP-binding subunit [Mycobacterium abscessus] Length=844 Score = 1541 bits (3990), Expect = 0.0, Method: Compositional matrix adjust. Identities = 784/847 (93%), Positives = 806/847 (96%), Gaps = 11/847 (1%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGAELTRVRQQVIQLLSGYQGKE AE+GTGGRGGE+G+PSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKETAESGTGGRGGEAGTPSTSLVLDQFGRNLTA 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE Sbjct 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLK+KQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 241 TLKNKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD A+VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIA+ARREKESAIDAQDFEKAA LRD EK LVAQRA+REKQWRSGDLDVVAEVD Sbjct 421 LREFDEKIADARREKESAIDAQDFEKAARLRDSEKQLVAQRADREKQWRSGDLDVVAEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTE ETTRLLRME+ELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 481 DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DP+RPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPRRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYN+LLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLIFTSNLGTSDISK VGLGFS+G ++YERMKQKV+DELKKHFRPEFLNRIDDIIVF Sbjct 661 VLIFTSNLGTSDISKAVGLGFSEGAAGSNYERMKQKVHDELKKHFRPEFLNRIDDIIVFE 720 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QLT+E+II MVDLMI RV QLK+KDMA+ LTD AK+LLAKRGFDPVLGARPLRRTIQRE Sbjct 721 QLTQEQIIEMVDLMIGRVGKQLKTKDMAMELTDKAKSLLAKRGFDPVLGARPLRRTIQRE 780 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSA 840 IED LSEKILF EVGPG++VTVDV+NWDGE GEDA FTF G KP Sbjct 781 IEDALSEKILFNEVGPGELVTVDVENWDGESAGEDAKFTFVGRPKPAL-----------V 829 Query 841 GGPEPAA 847 G EPAA Sbjct 830 AGEEPAA 836 >gi|226304135|ref|YP_002764093.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus erythropolis PR4] gi|229494287|ref|ZP_04388050.1| ATPase family protein protein [Rhodococcus erythropolis SK121] gi|226183250|dbj|BAH31354.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus erythropolis PR4] gi|229318649|gb|EEN84507.1| ATPase family protein protein [Rhodococcus erythropolis SK121] Length=847 Score = 1540 bits (3988), Expect = 0.0, Method: Compositional matrix adjust. Identities = 770/848 (91%), Positives = 806/848 (96%), Gaps = 3/848 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGA+L RVRQQVIQLLSGYQGKE E TGG GE+G+PSTSLVLDQFGRNLT Sbjct 121 AQVLVKLGADLNRVRQQVIQLLSGYQGKEPTE--TGGTRGEAGTPSTSLVLDQFGRNLTQ 178 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AA+EGKLDPVIGR KEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIV+GEVPE Sbjct 179 AALEGKLDPVIGRSKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPE 238 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 239 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 298 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK Sbjct 299 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 358 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD A+VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 359 GLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 418 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFD++IA+ARREKESAIDAQDFEKAA+LRD+EKTLVAQRAEREKQWR+GDLDV+AEVD Sbjct 419 LREFDDRIADARREKESAIDAQDFEKAANLRDKEKTLVAQRAEREKQWRAGDLDVIAEVD 478 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVLGNWTGIPVFKLTE ETTRLLRMEEELHKRIIGQE+AVK+VSKAIRRTRAGLK Sbjct 479 DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEEELHKRIIGQEEAVKSVSKAIRRTRAGLK 538 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTEL+K+LANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 539 DPKRPSGSFIFAGPSGVGKTELAKSLANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 598 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYN+LLQVLEDGRLTDGQGRTVDFKNT Sbjct 599 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNT 658 Query 661 VLIFTSNLGTSDISKPVGLGFSKG-GGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVF 719 VLIFTSNLGTSDISK VGLGFS G G E++YERMK KV+DELKKHFRPEFLNRIDDI+VF Sbjct 659 VLIFTSNLGTSDISKAVGLGFSSGTGTESNYERMKLKVHDELKKHFRPEFLNRIDDIVVF 718 Query 720 HQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQR 779 HQLT E+I++MVDLM++RV LK+KDMA+ +TD AK+LLAKRGFDPVLGARPLRRTIQR Sbjct 719 HQLTNEQIVQMVDLMLARVEAALKNKDMAMEVTDKAKSLLAKRGFDPVLGARPLRRTIQR 778 Query 780 EIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHS 839 EIEDQ+SEKILF E+GPG +V VDV+NWDGEG GEDA FTFT T+KP PD Sbjct 779 EIEDQMSEKILFGEIGPGHIVLVDVENWDGEGSGEDAKFTFTPTKKPIDVPDAPPIELTK 838 Query 840 AGGPEPAA 847 AG E AA Sbjct 839 AGESESAA 846 >gi|333918015|ref|YP_004491596.1| chaperone activity ATPase [Amycolicicoccus subflavus DQS3-9A1] gi|333480236|gb|AEF38796.1| ATPase with chaperone activity, ATP-binding subunit [Amycolicicoccus subflavus DQS3-9A1] Length=851 Score = 1537 bits (3979), Expect = 0.0, Method: Compositional matrix adjust. Identities = 771/852 (91%), Positives = 808/852 (95%), Gaps = 7/852 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLE VR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEAVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 +QVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 NQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGA+LTRVRQQVIQLLSGYQGKE AEAG G GE+G+PSTSLVLDQFGRNLT Sbjct 121 AQVLVKLGADLTRVRQQVIQLLSGYQGKEPAEAGVGR--GEAGTPSTSLVLDQFGRNLTQ 178 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AAMEGKLDPVIGR+KEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQ+IV+GEVPE Sbjct 179 AAMEGKLDPVIGRQKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQSIVNGEVPE 238 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 239 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 298 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP+VEHTIEILK Sbjct 299 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILK 358 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD A+VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 359 GLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 418 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDE+IAEARREKESAIDAQDFEKAA LRD+EK LVAQRAEREKQWRSGDLDVVA+VD Sbjct 419 LREFDERIAEARREKESAIDAQDFEKAAKLRDKEKQLVAQRAEREKQWRSGDLDVVAQVD 478 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVL NWTGIPVFKLTE ET+RLLRME+ELHKRIIGQEDAV+AV+KAIRRTRAGLK Sbjct 479 DEQIAEVLSNWTGIPVFKLTEEETSRLLRMEDELHKRIIGQEDAVRAVAKAIRRTRAGLK 538 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DP+RPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 539 DPRRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 598 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYN+LLQVLEDGRLTDGQGRTVDFKNT Sbjct 599 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNT 658 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGE-NDYERMKQKVNDELKKHFRPEFLNRIDDIIVF 719 VLIFTSNLGT+DISK VGLGF+ G E ++YERMK KVNDELKKHFRPEFLNRIDD+IVF Sbjct 659 VLIFTSNLGTADISKAVGLGFTAGTSEASNYERMKLKVNDELKKHFRPEFLNRIDDVIVF 718 Query 720 HQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQR 779 HQLT+E+II MVDLM +RV QLK KDMAL LT+ AK+LLAKRGFDPVLGARPLRRT+QR Sbjct 719 HQLTQEQIIEMVDLMTNRVETQLKHKDMALELTEQAKSLLAKRGFDPVLGARPLRRTVQR 778 Query 780 EIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKP---PAEPDLAKAG 836 EIEDQLSEKILF E+ PGQ++ VDV+NWDG G GE+A FTF GT+KP P P+ A AG Sbjct 779 EIEDQLSEKILFGEIEPGQIIVVDVENWDGTGAGENAKFTFQGTKKPVPVPDAPEDALAG 838 Query 837 AHSAG-GPEPAA 847 A +G PE AA Sbjct 839 AGESGPSPESAA 850 >gi|54022379|ref|YP_116621.1| putative Clp protease [Nocardia farcinica IFM 10152] gi|54013887|dbj|BAD55257.1| putative Clp protease [Nocardia farcinica IFM 10152] Length=851 Score = 1530 bits (3961), Expect = 0.0, Method: Compositional matrix adjust. Identities = 773/853 (91%), Positives = 800/853 (94%), Gaps = 11/853 (1%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGA+L RVRQQVIQLLSGYQGKE E+G G E+G+PSTSLVLDQFGRNLT Sbjct 121 AQVLVKLGADLNRVRQQVIQLLSGYQGKEPVESGARG---ETGTPSTSLVLDQFGRNLTQ 177 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AA+EGKLDPVIGR KEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIV+GEVPE Sbjct 178 AALEGKLDPVIGRSKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPE 237 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG Sbjct 238 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 297 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTI ILK Sbjct 298 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTINILK 357 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD A+VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 358 GLRDRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 417 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFD+KIA+ARREKESAIDAQDFEKAA LRD+EK LVA+RAEREKQWRSGDLDVVAEVD Sbjct 418 LREFDDKIADARREKESAIDAQDFEKAARLRDKEKQLVAKRAEREKQWRSGDLDVVAEVD 477 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVL NWTGIPVFKLTE ETTRLLRME+ELHKRIIGQEDAVKAVSKAIRRTRAGLK Sbjct 478 DEQIAEVLANWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLK 537 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 538 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 597 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYN+LLQVLEDGRLTDGQGRTVDFKNT Sbjct 598 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNT 657 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGE-NDYERMKQKVNDELKKHFRPEFLNRIDDIIVF 719 VLIFTSNLGT DISK VGLGFS+ E ++YERMK KVNDELKKHFRPEFLNRIDD+IVF Sbjct 658 VLIFTSNLGTQDISKAVGLGFSQSNNEGSNYERMKLKVNDELKKHFRPEFLNRIDDVIVF 717 Query 720 HQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQR 779 HQLT E+I+ MVDLMI RVA QLK+KDMA+ LT AK LLAKRGFDPVLGARPLRRTIQR Sbjct 718 HQLTNEQIVEMVDLMIGRVATQLKNKDMAIELTPTAKNLLAKRGFDPVLGARPLRRTIQR 777 Query 780 EIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTG----TRKPPAE-PDLAK 834 EIEDQLSEKILF E+GPGQ + VDV+ WDGEG GEDA FTFTG T+ P E P++ Sbjct 778 EIEDQLSEKILFGEIGPGQTILVDVEGWDGEGSGEDAKFTFTGKAKLTKAPTEEKPEVVL 837 Query 835 AGAHSAGGPEPAA 847 GA A GP AA Sbjct 838 TGA--AEGPSEAA 848 >gi|333992525|ref|YP_004525139.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp. JDM601] gi|333488493|gb|AEF37885.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp. JDM601] Length=821 Score = 1529 bits (3958), Expect = 0.0, Method: Compositional matrix adjust. Identities = 778/820 (95%), Positives = 801/820 (98%), Gaps = 1/820 (0%) Query 22 MLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPFT 81 MLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPFT Sbjct 1 MLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPFT 60 Query 82 PRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQL 141 PRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGA+LTRVRQQVIQL Sbjct 61 PRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLTRVRQQVIQL 120 Query 142 LSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERVM 201 LSGYQGKE AEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERVM Sbjct 121 LSGYQGKETAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERVM 180 Query 202 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGSRY 261 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIV GEVPETLKDKQLYTLDLGSLVAGSRY Sbjct 181 QVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVAGEVPETLKDKQLYTLDLGSLVAGSRY 240 Query 262 RGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG 321 RGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG Sbjct 241 RGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIG 300 Query 322 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAMVA 381 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSI+D+A+VA Sbjct 301 ATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSISDSAIVA 360 Query 382 AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDA 441 AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIA+ARREKESAIDA Sbjct 361 AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAIDA 420 Query 442 QDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVDDEQIAEVLGNWTGIPVFKLTE 501 QDFEKAASLRDREK LVAQRAEREKQWR+GDLDVVAEVDDEQIAEVLGNWTGIPVFKLTE Sbjct 421 QDFEKAASLRDREKQLVAQRAEREKQWRAGDLDVVAEVDDEQIAEVLGNWTGIPVFKLTE 480 Query 502 AETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTE 561 AETTRLLRME+ELHKRIIGQ+DAV AVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTE Sbjct 481 AETTRLLRMEDELHKRIIGQKDAVNAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTE 540 Query 562 LSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSV 621 LSKALA FLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSV Sbjct 541 LSKALAEFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSV 600 Query 622 VLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKPVGLGF 681 VLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKN VLIFTSNLGTSDISK VGLGF Sbjct 601 VLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNCVLIFTSNLGTSDISKAVGLGF 660 Query 682 SKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMISRVAGQ 741 ++GGGEN+YERMK KVNDELKKHFRPEFLNRIDDIIVFHQL++EEII+MVDLMI RVA Q Sbjct 661 TQGGGENNYERMKLKVNDELKKHFRPEFLNRIDDIIVFHQLSKEEIIQMVDLMIGRVAKQ 720 Query 742 LKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVT 801 LK+KDM + L+D AK+LLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEE+GPGQ+VT Sbjct 721 LKAKDMDIALSDKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEELGPGQLVT 780 Query 802 VDVDNWDGEGPGEDAVFTFTGTRKPPA-EPDLAKAGAHSA 840 VDVDNWDGEGP EDAVFTF G++KP A E DLAKAGA +A Sbjct 781 VDVDNWDGEGPQEDAVFTFVGSQKPAAEESDLAKAGAPTA 820 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/63 (61%), Positives = 46/63 (74%), Gaps = 0/63 (0%) Query 5 FTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVE 64 FT RA++V+ L+ EA L HNYIGTEHILLGLI EGEGVAA+ L LG L VR QV Sbjct 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLTRVRQQVI 118 Query 65 EII 67 +++ Sbjct 119 QLL 121 >gi|296138309|ref|YP_003645552.1| ATPase AAA [Tsukamurella paurometabola DSM 20162] gi|296026443|gb|ADG77213.1| ATPase AAA-2 domain protein [Tsukamurella paurometabola DSM 20162] Length=855 Score = 1506 bits (3899), Expect = 0.0, Method: Compositional matrix adjust. Identities = 753/852 (89%), Positives = 799/852 (94%), Gaps = 6/852 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAK+LESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEI+GQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIVGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAE-AGTGGR---GGESGSPSTSLVLDQFGR 176 AQVLVKLGA+L RVRQQVIQLLSGYQGKE E AG G R GGE+G+PSTSLVLDQFGR Sbjct 121 AQVLVKLGADLNRVRQQVIQLLSGYQGKEGGEPAGAGARASSGGEAGTPSTSLVLDQFGR 180 Query 177 NLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHG 236 NLTAAA +GKLDPVIGR KEIER+MQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIV+G Sbjct 181 NLTAAAAQGKLDPVIGRSKEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNG 240 Query 237 EVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAG 296 VPETLKDKQLYTLDLGSLVAGSRYRGDFEERL+KVLKEI+TRGDIILFIDELHTLVGAG Sbjct 241 NVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLRKVLKEIDTRGDIILFIDELHTLVGAG 300 Query 297 AAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTI 356 AAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP+VEH I Sbjct 301 AAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHAI 360 Query 357 EILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMT 416 EILKGLRDRYEAHHR+SITD+A+VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMT Sbjct 361 EILKGLRDRYEAHHRISITDSALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMT 420 Query 417 APPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVV 476 APPDLR+FD+KIA+ARREKESAID QDFEKAASLRD+EK L+ +RAEREKQWR+GDLDVV Sbjct 421 APPDLRQFDDKIADARREKESAIDEQDFEKAASLRDKEKQLIGERAEREKQWRAGDLDVV 480 Query 477 AEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTR 536 AEVD+EQIAEVLGNWTGIPVFKLTE ETTRLLRME+ELHKRIIGQEDAVKAVSKAIRRTR Sbjct 481 AEVDEEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTR 540 Query 537 AGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFG 596 AGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFG+DDALIQIDMGEFHDRFTASRLFG Sbjct 541 AGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFG 600 Query 597 APPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVD 656 APPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAH EIYN+LLQVLEDGRLTDGQGRTVD Sbjct 601 APPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVD 660 Query 657 FKNTVLIFTSNLGTSDISKPVGLGFSKGGGEN-DYERMKQKVNDELKKHFRPEFLNRIDD 715 FKNTVLIFTSNLGT DISK VGLGF++G + +Y+RMKQKVNDELKKHFRPEFLNRIDD Sbjct 661 FKNTVLIFTSNLGTGDISKAVGLGFTQGDSDGANYDRMKQKVNDELKKHFRPEFLNRIDD 720 Query 716 IIVFHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRR 775 I+VFHQLT+ +II MVDLM+SRVA LK+KDM + +TD AK+LLAKRGFDPVLGARPLRR Sbjct 721 IVVFHQLTQPQIIEMVDLMLSRVAVALKNKDMEIEVTDQAKSLLAKRGFDPVLGARPLRR 780 Query 776 TIQREIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKP-PAEPDLAK 834 TIQREIED LSEKILF E+GPGQ+V VDV+ WDGEG GEDA F F+G KP P E + + Sbjct 781 TIQREIEDNLSEKILFGELGPGQIVVVDVEGWDGEGKGEDAKFVFSGKPKPAPVESESSD 840 Query 835 AGAHSAGGPEPA 846 + G P+ Sbjct 841 DAVPALAGESPS 852 >gi|326383982|ref|ZP_08205665.1| ATPase AAA-2 domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326197142|gb|EGD54333.1| ATPase AAA-2 domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length=846 Score = 1506 bits (3898), Expect = 0.0, Method: Compositional matrix adjust. Identities = 756/843 (90%), Positives = 797/843 (95%), Gaps = 1/843 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAK+LESLGISLE VR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGA+L +VRQQVIQLLSGYQGKE AEAGTG R E+G+PSTSLVLDQFGRNLT Sbjct 121 AQVLVKLGADLNKVRQQVIQLLSGYQGKEPAEAGTGARSSEAGTPSTSLVLDQFGRNLTT 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AA EGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIV+G VPE Sbjct 181 AASEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGNVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELH LVGAGAAEG Sbjct 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHQLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP+VEHTIEILK Sbjct 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYE HH+VSITD A+ AAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEQHHKVSITDGALAAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFD++IA+AR+EKESAIDAQDFEKAASLRD+EK LV +RAEREKQWR+GDLDVVAEV+ Sbjct 421 LREFDDRIADARKEKESAIDAQDFEKAASLRDKEKQLVGERAEREKQWRAGDLDVVAEVN 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DE+IAEVLGNWTGIPVFKLTE ETTRLLRME+ELHKRIIGQ+DAV AVS+AIRRTRAGLK Sbjct 481 DEEIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQQDAVAAVSRAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFG+DDALIQIDMGEFHDRFTASRLFGAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGY+EGGQLTEKVRRKPFSVVLFDEIEKAH EIYN+LLQVLEDGRLTDGQGRTVDFKNT Sbjct 601 YVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHPEIYNTLLQVLEDGRLTDGQGRTVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGE-NDYERMKQKVNDELKKHFRPEFLNRIDDIIVF 719 VLIFTSNLGTSDISK VG+GFSK G ++Y+RMKQKVNDELKKHFRPEFLNRIDDIIVF Sbjct 661 VLIFTSNLGTSDISKAVGMGFSKDDGRGSNYDRMKQKVNDELKKHFRPEFLNRIDDIIVF 720 Query 720 HQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQR 779 HQLT++EII+MVDLMI RV QLK+KDM L LT+ AK LLAKRGFDPVLGARPLRRTIQR Sbjct 721 HQLTQDEIIQMVDLMIGRVEAQLKNKDMDLELTEKAKNLLAKRGFDPVLGARPLRRTIQR 780 Query 780 EIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHS 839 EIEDQLSEKILFEE+ GQ+V +DV+ WDGEG GEDA FTFTG+ +P A PD + + Sbjct 781 EIEDQLSEKILFEEIKAGQIVVIDVEGWDGEGAGEDATFTFTGSDRPRAVPDAPEELTQT 840 Query 840 AGG 842 A G Sbjct 841 ADG 843 >gi|257057497|ref|YP_003135329.1| ATPase with chaperone activity, ATP-binding subunit [Saccharomonospora viridis DSM 43017] gi|256587369|gb|ACU98502.1| ATPase with chaperone activity, ATP-binding subunit [Saccharomonospora viridis DSM 43017] Length=851 Score = 1469 bits (3803), Expect = 0.0, Method: Compositional matrix adjust. Identities = 753/852 (89%), Positives = 792/852 (93%), Gaps = 11/852 (1%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAK+LESLGI+LEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 QVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 QQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGA+L RVRQQV+QLLSGYQGKE AEAG GRG G+PS+SLVLDQFGRNLTA Sbjct 121 AQVLVKLGADLNRVRQQVLQLLSGYQGKEPAEAG-AGRG--EGTPSSSLVLDQFGRNLTA 177 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AA EGKLDPVIGR KEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQ IV GEVPE Sbjct 178 AAREGKLDPVIGRSKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQNIVKGEVPE 237 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEI TRGDIILFIDELHTLVGAGAAEG Sbjct 238 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIKTRGDIILFIDELHTLVGAGAAEG 297 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKP LARGELQTIGATTL+EYRKYIEKDAALERRFQP+QVGEP++EHTIEILK Sbjct 298 AIDAASILKPMLARGELQTIGATTLEEYRKYIEKDAALERRFQPIQVGEPSLEHTIEILK 357 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD+A+ AAATLADRYINDR+LPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 358 GLRDRYEAHHRVSITDSALAAAATLADRYINDRYLPDKAIDLIDEAGARMRIRRMTAPPD 417 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIAE RREKESAIDAQDFE+AA LRD EKTL+ Q+AEREKQW+ GDLDVVAEVD Sbjct 418 LREFDEKIAEVRREKESAIDAQDFERAARLRDEEKTLLGQKAEREKQWKDGDLDVVAEVD 477 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVL NWTGIPVFKLTE ETTRLLRMEEELHKRIIGQEDAVKAVS+AIRRTRAGLK Sbjct 478 DEQIAEVLANWTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSQAIRRTRAGLK 537 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFG+DDALIQIDMGEFHDR+TASRLFGAPPG Sbjct 538 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPG 597 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYN+LLQVLEDGRLTDGQGRTVDFKNT Sbjct 598 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNT 657 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGEND-YERMKQKVNDELKKHFRPEFLNRIDDIIVF 719 VLIFTSNLGT DISK V LGFS E D YE+MKQKV++E+KKHFRPEFLNRIDDIIVF Sbjct 658 VLIFTSNLGTQDISKSVSLGFSSSRDETDRYEKMKQKVHEEMKKHFRPEFLNRIDDIIVF 717 Query 720 HQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQR 779 HQLT+E+II+MVDLM+SRV QLK+KDMAL LTD AKALLAKRGFDPVLGARPLRRTIQR Sbjct 718 HQLTQEQIIQMVDLMVSRVEEQLKAKDMALELTDKAKALLAKRGFDPVLGARPLRRTIQR 777 Query 780 EIEDQLSEKILFEEVGPGQVVTVDVDNWD-GEGPGEDAVFTFTGTRKPPAEPD-----LA 833 EIEDQLSEKILF EV PGQ++ VDV+ W+ G+ + A FTF G KP PD +A Sbjct 778 EIEDQLSEKILFGEVQPGQIIIVDVEGWEIGDERDDQARFTFRGEPKPLDVPDAPPVSIA 837 Query 834 KAGA-HSAGGPE 844 AG+ S+G PE Sbjct 838 AAGSEESSGEPE 849 >gi|302530766|ref|ZP_07283108.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4] gi|302439661|gb|EFL11477.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4] Length=849 Score = 1464 bits (3789), Expect = 0.0, Method: Compositional matrix adjust. Identities = 733/835 (88%), Positives = 781/835 (94%), Gaps = 7/835 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAK+LESLGI+LEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 QVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 QQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQ-GKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLT 179 AQVLVKLGA+L RVRQQV+QLLSGYQ G+++ E+G+G RG G+PS+SLVLDQFGRN+T Sbjct 121 AQVLVKLGADLNRVRQQVLQLLSGYQTGEKSTESGSG-RG--EGTPSSSLVLDQFGRNMT 177 Query 180 AAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVP 239 A EGKLDPVIGR KEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQ+IV GEVP Sbjct 178 VLAREGKLDPVIGRGKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQSIVKGEVP 237 Query 240 ETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAE 299 ETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEI TRGDIILFIDELHTLVGAGAAE Sbjct 238 ETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIKTRGDIILFIDELHTLVGAGAAE 297 Query 300 GAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEIL 359 GAIDAASILKP LARGELQTIGATTL+EYRKYIEKDAALERRFQP+QVGEP++EHTIEIL Sbjct 298 GAIDAASILKPMLARGELQTIGATTLEEYRKYIEKDAALERRFQPIQVGEPSLEHTIEIL 357 Query 360 KGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPP 419 KGLRDRYEAHHRVSITD+A+VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPP Sbjct 358 KGLRDRYEAHHRVSITDSALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPP 417 Query 420 DLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEV 479 DLREFDEKIA+ RR+KESAIDAQDFE+AA LRD EK L+ Q+ EREKQW+ GDLDVVAEV Sbjct 418 DLREFDEKIADVRRDKESAIDAQDFERAARLRDEEKQLLGQKGEREKQWKDGDLDVVAEV 477 Query 480 DDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGL 539 DDEQIAEVL NWTGIPVFKLTE ETTRLLRME+ELHKRIIGQEDAVKAVS+AIRRTRAGL Sbjct 478 DDEQIAEVLANWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGL 537 Query 540 KDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPP 599 KDPKRPSGSFIFAGPSGVGKTELSKALA+FLFG+DDALIQIDMGEFHDR+TASRLFGAPP Sbjct 538 KDPKRPSGSFIFAGPSGVGKTELSKALASFLFGEDDALIQIDMGEFHDRYTASRLFGAPP 597 Query 600 GYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKN 659 GYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYN+LLQVLEDGRLTDGQGRTVDFKN Sbjct 598 GYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKN 657 Query 660 TVLIFTSNLGTSDISKPVGLGFSKGG-GENDYERMKQKVNDELKKHFRPEFLNRIDDIIV 718 TVLIFTSNLGTSDISK V LGFS G N YE+MKQKVN+E+KKHFRPEFLNRIDDIIV Sbjct 658 TVLIFTSNLGTSDISKSVSLGFSSGADSTNRYEKMKQKVNEEMKKHFRPEFLNRIDDIIV 717 Query 719 FHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQ 778 FHQL +E+II+MVDLMI RV QLK+KDM + LT+ AKALLAKRGFDPVLGARPLRRTIQ Sbjct 718 FHQLNQEQIIQMVDLMIGRVETQLKAKDMEIELTEKAKALLAKRGFDPVLGARPLRRTIQ 777 Query 779 REIEDQLSEKILFEEVGPGQVVTVDVDNWDG--EGPGEDAVFTFTGTRKPPAEPD 831 REIEDQLSEKILF EV PGQ++ VDV+ W G E ++A FTF G ++P + PD Sbjct 778 REIEDQLSEKILFGEVEPGQIIVVDVEGWSGNPEDRDDEAHFTFRGEKRPSSVPD 832 >gi|256374490|ref|YP_003098150.1| ATPase AAA [Actinosynnema mirum DSM 43827] gi|255918793|gb|ACU34304.1| ATPase AAA-2 domain protein [Actinosynnema mirum DSM 43827] Length=852 Score = 1464 bits (3789), Expect = 0.0, Method: Compositional matrix adjust. Identities = 735/849 (87%), Positives = 782/849 (93%), Gaps = 7/849 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAK+LESLGI+LEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 QVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 QQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQG-KEAAEAGTGGRGGESGSPSTSLVLDQFGRNLT 179 AQVLVKLGA+L RVRQQV+QLLSGY G KE AEAG GRG G+PS+SLVLDQFGRNLT Sbjct 121 AQVLVKLGADLNRVRQQVLQLLSGYSGGKEPAEAG--GRG--EGTPSSSLVLDQFGRNLT 176 Query 180 AAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVP 239 + A EGKLDPVIGR KEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQ +V GEVP Sbjct 177 SMAREGKLDPVIGRAKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQMVVKGEVP 236 Query 240 ETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAE 299 ETLKDKQLYTLDL SLVAGSRYRGDFEERLKKVLKEI TRGDIILFIDE+HTLVGAGAAE Sbjct 237 ETLKDKQLYTLDLSSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAE 296 Query 300 GAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEIL 359 GAIDAASILKP LARGELQTIGATTLDEYRKY+EKD ALERRFQP+QVGEP++EHTIEIL Sbjct 297 GAIDAASILKPMLARGELQTIGATTLDEYRKYVEKDPALERRFQPIQVGEPSLEHTIEIL 356 Query 360 KGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPP 419 KGLRDRYEAHHRVSITD+A+VAAATLADRYINDR+LPDKAIDLIDEAGARMRIRRMTAPP Sbjct 357 KGLRDRYEAHHRVSITDSALVAAATLADRYINDRYLPDKAIDLIDEAGARMRIRRMTAPP 416 Query 420 DLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEV 479 DLREFDEKIA+ RR+KESAIDAQDFE+AA LRD+EKTL+ Q+AEREKQW+ GDLDVVAEV Sbjct 417 DLREFDEKIADVRRDKESAIDAQDFERAAKLRDQEKTLLGQKAEREKQWKDGDLDVVAEV 476 Query 480 DDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGL 539 D+EQIAEVL NWTGIPVFKLTE ETTRLLRME+ELHKRIIGQ +AVKAVS+AIRRTRAGL Sbjct 477 DEEQIAEVLANWTGIPVFKLTEEETTRLLRMEDELHKRIIGQVEAVKAVSQAIRRTRAGL 536 Query 540 KDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPP 599 KDPKRP+GSFIFAGPSGVGKTELSKALANFLFG+DDALIQIDMGEFHDR+TASRLFGAPP Sbjct 537 KDPKRPAGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPP 596 Query 600 GYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKN 659 GYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAH E+YN+LLQVLEDGRLTDGQGRTVDFKN Sbjct 597 GYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHNEVYNTLLQVLEDGRLTDGQGRTVDFKN 656 Query 660 TVLIFTSNLGTSDISKPVGLGFSKG-GGENDYERMKQKVNDELKKHFRPEFLNRIDDIIV 718 TV+IFTSNLGTSDISK VGLGF+ G ++YERMK KVNDELKKHFRPEFLNRIDDIIV Sbjct 657 TVIIFTSNLGTSDISKAVGLGFASGQDNASNYERMKNKVNDELKKHFRPEFLNRIDDIIV 716 Query 719 FHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQ 778 FHQLTR+EIIRMVDL+I+RV QLK+KDMA+ LT+ AK LLAKRGFDPVLGARPLRRTIQ Sbjct 717 FHQLTRDEIIRMVDLLIARVETQLKNKDMAIELTEKAKQLLAKRGFDPVLGARPLRRTIQ 776 Query 779 REIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGED-AVFTFTGTRKPPAEPDLAKAGA 837 REIEDQLSEKILF E+ PGQ+V DV+ WDGE D A F F +KP PD Sbjct 777 REIEDQLSEKILFGELQPGQIVITDVEGWDGESDQHDKAKFVFRSEQKPTKVPDSPPVDL 836 Query 838 HSAGGPEPA 846 AGG + A Sbjct 837 AGAGGDDSA 845 >gi|134097027|ref|YP_001102688.1| putative ATP-dependent Clp protease [Saccharopolyspora erythraea NRRL 2338] gi|133909650|emb|CAL99762.1| putative ATP-dependent Clp protease [Saccharopolyspora erythraea NRRL 2338] Length=853 Score = 1459 bits (3776), Expect = 0.0, Method: Compositional matrix adjust. Identities = 729/832 (88%), Positives = 773/832 (93%), Gaps = 5/832 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAK+LESLGI+LEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 QVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 QQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGA+L RVRQQV+QLLSGYQGKE AEAG GRG G+PS+SLVLDQFGRNLT Sbjct 121 AQVLVKLGADLNRVRQQVLQLLSGYQGKEPAEAG--GRG--EGTPSSSLVLDQFGRNLTQ 176 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 +A E KLDPVIGREKEIER+MQVLSRRTKNNPVLIGE GVGKTAVVEGLAQ +V GEVPE Sbjct 177 SARESKLDPVIGREKEIERIMQVLSRRTKNNPVLIGEAGVGKTAVVEGLAQKVVKGEVPE 236 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEI TRGDIILFIDE+HTLVGAGAAEG Sbjct 237 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIKTRGDIILFIDEIHTLVGAGAAEG 296 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKP LARGELQTIGATTL+EYRKY+EKD ALERRFQP+QVGEP++EHTIEILK Sbjct 297 AIDAASILKPMLARGELQTIGATTLEEYRKYVEKDPALERRFQPIQVGEPSLEHTIEILK 356 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD A+V+AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 357 GLRDRYEAHHRVSITDGALVSAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 416 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIA+ RR+KESAIDAQDFE+AA LRD EK L+ Q+ EREKQW++GDLDVVAEVD Sbjct 417 LREFDEKIADVRRDKESAIDAQDFERAARLRDEEKQLLGQKDEREKQWKAGDLDVVAEVD 476 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVL NWTGIPVFKLTE ETTRLLRME+ELHKRIIGQ+DAVKAVS+AIRRTRAGLK Sbjct 477 DEQIAEVLANWTGIPVFKLTEEETTRLLRMEDELHKRIIGQDDAVKAVSQAIRRTRAGLK 536 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALA FLFGDDDAL+QIDMGEFHDR+TASRLFGAPPG Sbjct 537 DPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDALVQIDMGEFHDRYTASRLFGAPPG 596 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYN+LLQVLEDGRLTDGQGRTVDFKNT Sbjct 597 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNT 656 Query 661 VLIFTSNLGTSDISKPVGLGFSKG-GGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVF 719 VLIFTSNLGT DISK VGLGFS G E++YERMK KVN+E+KKHFRPEFLNRIDD+IVF Sbjct 657 VLIFTSNLGTQDISKAVGLGFSAGTDSESNYERMKSKVNEEMKKHFRPEFLNRIDDVIVF 716 Query 720 HQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQR 779 HQLT EII+MVDL+ +RV LK KDM+L LT AK LLAKRGFDPVLGARPLRRTIQR Sbjct 717 HQLTEAEIIQMVDLLGARVEKALKGKDMSLELTTLAKKLLAKRGFDPVLGARPLRRTIQR 776 Query 780 EIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPD 831 EIED+LSEKILF E+ PGQ+V VDV+ WDGEG + A FTF G KP PD Sbjct 777 EIEDRLSEKILFGEIEPGQIVIVDVEGWDGEGSDDKAHFTFRGETKPSLVPD 828 >gi|331699829|ref|YP_004336068.1| ATPase [Pseudonocardia dioxanivorans CB1190] gi|326954518|gb|AEA28215.1| ATPase AAA-2 domain protein [Pseudonocardia dioxanivorans CB1190] Length=847 Score = 1454 bits (3763), Expect = 0.0, Method: Compositional matrix adjust. Identities = 737/847 (88%), Positives = 780/847 (93%), Gaps = 16/847 (1%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAK+LESLGI+LEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 QVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 QQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGA+L RVRQQV+QLLSGYQGKE AEA + GRG G+PS+SLVLDQFGRNLT Sbjct 121 AQVLVKLGADLNRVRQQVLQLLSGYQGKEPAEA-SAGRG--EGTPSSSLVLDQFGRNLTQ 177 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 A EGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQ IV GEVPE Sbjct 178 QAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQGIVKGEVPE 237 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEI TRGDIILFIDE+HTLVGAGAAEG Sbjct 238 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEG 297 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKP LARGELQTIGATTLDEYRKY+EKD ALERRFQP+QVGEP+V HTIEILK Sbjct 298 AIDAASILKPMLARGELQTIGATTLDEYRKYVEKDPALERRFQPIQVGEPSVTHTIEILK 357 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRV+ITD A+VAAATLADRYI+DRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 358 GLRDRYEAHHRVTITDPALVAAATLADRYISDRFLPDKAIDLIDEAGARMRIRRMTAPPD 417 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIA RR+KESAIDAQDFE+AASLRD EK L+ Q++EREKQW+SGDLDVVAEVD Sbjct 418 LREFDEKIAGVRRDKESAIDAQDFERAASLRDTEKQLLGQKSEREKQWKSGDLDVVAEVD 477 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVL NWTGIPVFKLTE ETTRLLRME+ELHKRIIGQEDAVKAVS+AIRRTRAGLK Sbjct 478 DEQIAEVLANWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLK 537 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFG+DDALIQIDMGEFHDR+TASRLFGAPPG Sbjct 538 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPG 597 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQE+YN+LLQVLEDGRLTDGQGRTVDFKNT Sbjct 598 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEVYNTLLQVLEDGRLTDGQGRTVDFKNT 657 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGE-NDYERMKQKVNDELKKHFRPEFLNRIDDIIVF 719 V+IFTSNLGT DISK VGLGF++ E ++YERMK KV+DELKKHFRPEFLNRIDDIIVF Sbjct 658 VIIFTSNLGTQDISKAVGLGFAQSNDEASNYERMKTKVHDELKKHFRPEFLNRIDDIIVF 717 Query 720 HQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQR 779 HQLT E+II MVDLMI+RV QL +KDM + LT AAK+LLA+RGFDPVLGARPLRRTIQR Sbjct 718 HQLTEEQIITMVDLMITRVEAQLANKDMGIELTPAAKSLLARRGFDPVLGARPLRRTIQR 777 Query 780 EIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGP------GEDAVFTFTGTRKP----PAE 829 EIEDQLSEKILF EV PGQ+V VDV+ D + P + A FTF G +P P Sbjct 778 EIEDQLSEKILFGEVEPGQIVLVDVEGLDPDAPEGSRAADDKAHFTFRGEARPAALVPDA 837 Query 830 P--DLAK 834 P DLAK Sbjct 838 PPVDLAK 844 >gi|324998065|ref|ZP_08119177.1| putative ATP-dependent Clp protease [Pseudonocardia sp. P1] Length=848 Score = 1452 bits (3758), Expect = 0.0, Method: Compositional matrix adjust. Identities = 734/851 (87%), Positives = 777/851 (92%), Gaps = 10/851 (1%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAK+LESLGI+LEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 QVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 QQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGA+L RVRQQV+QLLSGYQGKE E+GTGGRG G+PS+SLVLDQFGRNLT Sbjct 121 AQVLVKLGADLNRVRQQVLQLLSGYQGKEPQESGTGGRG--EGTPSSSLVLDQFGRNLTQ 178 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 A EGKLDPVIGREKEIER+MQVLSRRTKNNPVLIGE GVGKTA VEGL QAIV GEVPE Sbjct 179 QAREGKLDPVIGREKEIERIMQVLSRRTKNNPVLIGEAGVGKTAAVEGLGQAIVKGEVPE 238 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEI TRGDIILFIDE+HTLVGAGAAEG Sbjct 239 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEG 298 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKP LARGELQTIGATTLDEYRKY+EKD ALERRFQP+QV EP+V HTIEILK Sbjct 299 AIDAASILKPMLARGELQTIGATTLDEYRKYVEKDPALERRFQPIQVSEPSVTHTIEILK 358 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRV+ITD A+ +AATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 359 GLRDRYEAHHRVTITDDALSSAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 418 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDEKIA RR+KESAIDAQDFE+AA LRD+EKTL+ ++AEREKQW+SGDLDVVAEVD Sbjct 419 LREFDEKIANVRRDKESAIDAQDFERAAHLRDQEKTLLGEKAEREKQWKSGDLDVVAEVD 478 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 EQIAEVLGNWTGIPVFKLTE ETTRLLRME+ELHKRIIGQEDAVK+VS+AIRRTRAGLK Sbjct 479 SEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKSVSQAIRRTRAGLK 538 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTELSKALANFLFG+DDALIQIDMGEFHDR+TASRLFGAPPG Sbjct 539 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPG 598 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYN+LLQVLEDGRLTDGQGR VDFKNT Sbjct 599 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRVVDFKNT 658 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGE-NDYERMKQKVNDELKKHFRPEFLNRIDDIIVF 719 VLIFTSNLGT DISK VGLGFS G E ++YERMK KVNDELKKHFRPEFLNRIDDIIVF Sbjct 659 VLIFTSNLGTQDISKAVGLGFSSGNDEASNYERMKTKVNDELKKHFRPEFLNRIDDIIVF 718 Query 720 HQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQR 779 HQL +++II MVDLMI RV QL +KDMA+ LT+ +K LLA+RGFDPVLGARPLRRTIQR Sbjct 719 HQLNQDQIIEMVDLMIGRVEKQLANKDMAIELTERSKKLLARRGFDPVLGARPLRRTIQR 778 Query 780 EIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGP------GEDAVFTFTGTRKPPAEPDLA 833 EIEDQLSEKILF E+ GQ+V VDV+ D + P + A FTF G RK PAEP Sbjct 779 EIEDQLSEKILFGELEGGQIVLVDVEGLDEDAPEDSKAYDDKAHFTFRGERK-PAEPVPD 837 Query 834 KAGAHSAGGPE 844 A GG E Sbjct 838 TPPAALTGGDE 848 >gi|302527020|ref|ZP_07279362.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4] gi|302435915|gb|EFL07731.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4] Length=831 Score = 1450 bits (3754), Expect = 0.0, Method: Compositional matrix adjust. Identities = 724/811 (90%), Positives = 767/811 (95%), Gaps = 5/811 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAK+LESLGI+LEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 QVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 QQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQ-GKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLT 179 AQVLVKLGA+L RVRQQV+QLLSGYQ G+++ E+G+G RG G+PS+SLVLDQFGRN+T Sbjct 121 AQVLVKLGADLNRVRQQVLQLLSGYQTGEKSTESGSG-RG--EGTPSSSLVLDQFGRNMT 177 Query 180 AAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVP 239 A EGKLDPVIGR KEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQ+IV GEVP Sbjct 178 VLAREGKLDPVIGRGKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQSIVKGEVP 237 Query 240 ETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAE 299 ETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEI TRGDIILFIDELHTLVGAGAAE Sbjct 238 ETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIKTRGDIILFIDELHTLVGAGAAE 297 Query 300 GAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEIL 359 GAIDAASILKP LARGELQTIGATTL+EYRKYIEKDAALERRFQP+QVGEP++EHTIEIL Sbjct 298 GAIDAASILKPMLARGELQTIGATTLEEYRKYIEKDAALERRFQPIQVGEPSLEHTIEIL 357 Query 360 KGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPP 419 KGLRDRYEAHHRVSITD+A+VAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPP Sbjct 358 KGLRDRYEAHHRVSITDSALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPP 417 Query 420 DLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEV 479 DLREFDEKIA+ RR+KESAIDAQDFE+AA LRD EK L+ Q+ EREKQW+ GDLDVVAEV Sbjct 418 DLREFDEKIADVRRDKESAIDAQDFERAARLRDEEKQLLGQKGEREKQWKDGDLDVVAEV 477 Query 480 DDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGL 539 DDEQIAEVL NWTGIPVFKLTE ETTRLLRME+ELHKRIIGQEDAVKAVS+AIRRTRAGL Sbjct 478 DDEQIAEVLANWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGL 537 Query 540 KDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPP 599 KDPKRPSGSFIFAGPSGVGKTELSKALA+FLFG+DDALIQIDMGEFHDR+TASRLFGAPP Sbjct 538 KDPKRPSGSFIFAGPSGVGKTELSKALASFLFGEDDALIQIDMGEFHDRYTASRLFGAPP 597 Query 600 GYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKN 659 GYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYN+LLQVLEDGRLTDGQGRTVDFKN Sbjct 598 GYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKN 657 Query 660 TVLIFTSNLGTSDISKPVGLGFSKGG-GENDYERMKQKVNDELKKHFRPEFLNRIDDIIV 718 TVLIFTSNLGTSDISK V LGFS G N YE+MKQKVN+E+KKHFRPEFLNRIDDIIV Sbjct 658 TVLIFTSNLGTSDISKSVSLGFSSGADSTNRYEKMKQKVNEEMKKHFRPEFLNRIDDIIV 717 Query 719 FHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQ 778 FHQL +E+II+MVDLMI RV QLK+KDM + LT+ AKALLAKRGFDPVLGARPLRRTIQ Sbjct 718 FHQLNQEQIIQMVDLMIGRVETQLKAKDMEIELTEKAKALLAKRGFDPVLGARPLRRTIQ 777 Query 779 REIEDQLSEKILFEEVGPGQVVTVDVDNWDG 809 REIEDQLSEKILF EV PGQ++ VDV+ W G Sbjct 778 REIEDQLSEKILFGEVEPGQIIVVDVEGWSG 808 >gi|317507816|ref|ZP_07965517.1| ATPase [Segniliparus rugosus ATCC BAA-974] gi|316253858|gb|EFV13227.1| ATPase [Segniliparus rugosus ATCC BAA-974] Length=842 Score = 1448 bits (3748), Expect = 0.0, Method: Compositional matrix adjust. Identities = 745/824 (91%), Positives = 778/824 (95%), Gaps = 3/824 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLE VR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEAVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQ PS HIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQGPSVHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQG--KEAAEAGTGGRGGESGSPSTSLVLDQFGRNL 178 AQVLVKLGA+L+RVRQQVIQLLSGY G KE AG GGRGGE+G+PSTSLVLDQFGRNL Sbjct 121 AQVLVKLGADLSRVRQQVIQLLSGYSGGGKEPEAAGAGGRGGEAGTPSTSLVLDQFGRNL 180 Query 179 TAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEV 238 T AA++GKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEV Sbjct 181 TRAALDGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEV 240 Query 239 PETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAA 298 PETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIN+RGDIILFIDELHTLVGAGAA Sbjct 241 PETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINSRGDIILFIDELHTLVGAGAA 300 Query 299 EGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEI 358 EGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP+VEHTIEI Sbjct 301 EGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEI 360 Query 359 LKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAP 418 LKGLRDRYEAHHRVSITD+A+ AAA+LADRYINDRFLPDKAIDLIDEAGARMRIRRMTAP Sbjct 361 LKGLRDRYEAHHRVSITDSALAAAASLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAP 420 Query 419 PDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAE 478 PDLREFDE+IA RR+KESAID QDFEKAA LRD EK LVAQRAEREKQWRSGD+DVVAE Sbjct 421 PDLREFDEQIANTRRQKESAIDEQDFEKAAGLRDSEKKLVAQRAEREKQWRSGDMDVVAE 480 Query 479 VDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAG 538 VD+EQIAEVL NWTGIPVFKLTE ET RLLRME+ELHKRIIGQ DAV AV+KAIRRTRAG Sbjct 481 VDEEQIAEVLANWTGIPVFKLTEEETARLLRMEDELHKRIIGQRDAVAAVAKAIRRTRAG 540 Query 539 LKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAP 598 LKDPKRPSGSFIFAGPSGVGKTELSKALANFLFG+DDALIQIDMGEFHDRFTASRLFGAP Sbjct 541 LKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAP 600 Query 599 PGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFK 658 PGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAH EIYN+LLQVLEDGRLTDGQGRTVDFK Sbjct 601 PGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHHEIYNTLLQVLEDGRLTDGQGRTVDFK 660 Query 659 NTVLIFTSNLGTSDISKPVGLGFSKG-GGENDYERMKQKVNDELKKHFRPEFLNRIDDII 717 NTVLIFTSNLGTSDISK VGLGFS G G ++YERMKQKV DELKKHFRPEFLNRID+I+ Sbjct 661 NTVLIFTSNLGTSDISKAVGLGFSSGEGNTSNYERMKQKVQDELKKHFRPEFLNRIDEIV 720 Query 718 VFHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTI 777 VFHQLT EEI++MVDLMI+RVA LK+KDM++ LT+ AK LLAKRGFDPVLGARPLRRTI Sbjct 721 VFHQLTTEEIVQMVDLMITRVATALKAKDMSIELTEQAKGLLAKRGFDPVLGARPLRRTI 780 Query 778 QREIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFT 821 QREIEDQLSEKILF E G GQ V VDV+ WDGE GE+A F F+ Sbjct 781 QREIEDQLSEKILFGEFGAGQKVLVDVEGWDGESAGENAKFVFS 824 >gi|296392867|ref|YP_003657751.1| ATPase AAA [Segniliparus rotundus DSM 44985] gi|296180014|gb|ADG96920.1| ATPase AAA-2 domain protein [Segniliparus rotundus DSM 44985] Length=842 Score = 1447 bits (3747), Expect = 0.0, Method: Compositional matrix adjust. Identities = 752/839 (90%), Positives = 782/839 (94%), Gaps = 5/839 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLE VR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEAVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQ PS HIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQGPSVHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQG--KEAAEAGTGGRGGESGSPSTSLVLDQFGRNL 178 AQVLVKLGA+L+RVRQQVIQLLSGY G KE AG GGRGGE+G+PSTSLVLDQFGRNL Sbjct 121 AQVLVKLGADLSRVRQQVIQLLSGYSGGGKEPEAAGAGGRGGEAGTPSTSLVLDQFGRNL 180 Query 179 TAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEV 238 T AA++GKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEV Sbjct 181 TRAALDGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEV 240 Query 239 PETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAA 298 PETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIN+RGDIILFIDELHTLVGAGAA Sbjct 241 PETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINSRGDIILFIDELHTLVGAGAA 300 Query 299 EGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEI 358 EGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEP+VEHTIEI Sbjct 301 EGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEI 360 Query 359 LKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAP 418 LKGLRDRYEAHHRVSITD+A+ AAA+LADRYINDRFLPDKAIDLIDEAGARMRIRRMTAP Sbjct 361 LKGLRDRYEAHHRVSITDSALAAAASLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAP 420 Query 419 PDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAE 478 PDLREFDEKIA RR+KESAID QDFEKAA LRD EK LVAQRAEREKQWRSGD+DVVAE Sbjct 421 PDLREFDEKIANTRRQKESAIDEQDFEKAAGLRDTEKKLVAQRAEREKQWRSGDMDVVAE 480 Query 479 VDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAG 538 VD+E+IAEVL NWTGIPVFKLTE ET RLLRME+ELHKRIIGQ DAV AV+KAIRRTRAG Sbjct 481 VDEEEIAEVLANWTGIPVFKLTEEETARLLRMEDELHKRIIGQRDAVAAVAKAIRRTRAG 540 Query 539 LKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAP 598 LKDPKRPSGSFIFAGPSGVGKTELSKALANFLFG+DDALIQIDMGEFHDRFTASRLFGAP Sbjct 541 LKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAP 600 Query 599 PGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFK 658 PGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAH EIYN+LLQVLEDGRLTDGQGRTVDFK Sbjct 601 PGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHHEIYNTLLQVLEDGRLTDGQGRTVDFK 660 Query 659 NTVLIFTSNLGTSDISKPVGLGFSKG-GGENDYERMKQKVNDELKKHFRPEFLNRIDDII 717 NTVLIFTSNLGTSDISK VGLGFS G G ++YERMKQKV DELKKHFRPEFLNRID+I+ Sbjct 661 NTVLIFTSNLGTSDISKAVGLGFSSGEGNTSNYERMKQKVQDELKKHFRPEFLNRIDEIV 720 Query 718 VFHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTI 777 VFHQLT EEI++MVDLMI+RVA LK+KDM + L+ AK LLAKRGFDPVLGARPLRRTI Sbjct 721 VFHQLTNEEIVKMVDLMITRVAAALKAKDMEIELSAQAKGLLAKRGFDPVLGARPLRRTI 780 Query 778 QREIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAG 836 QREIEDQLSEKILF E G GQ V VDV+ WDGE GEDA F F AEP LA AG Sbjct 781 QREIEDQLSEKILFGEFGAGQKVLVDVEGWDGESAGEDAKFVFRAAAA--AEPVLAGAG 837 >gi|319948880|ref|ZP_08022993.1| ATPase AAA-2 domain-containing protein [Dietzia cinnamea P4] gi|319437482|gb|EFV92489.1| ATPase AAA-2 domain-containing protein [Dietzia cinnamea P4] Length=883 Score = 1447 bits (3745), Expect = 0.0, Method: Compositional matrix adjust. Identities = 735/837 (88%), Positives = 778/837 (93%), Gaps = 8/837 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAK+LESLGISLE VR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEA----AEAGTGGRGGESGSPSTSLVLDQFGR 176 AQVLVKLGA+LTRVRQQVIQLLSGYQGKEA AGTGGR ESG+PS+S VLDQFGR Sbjct 121 AQVLVKLGADLTRVRQQVIQLLSGYQGKEAEASGTPAGTGGR--ESGTPSSSTVLDQFGR 178 Query 177 NLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHG 236 NLT AAMEGKLDPV+GR KE+ER+MQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIV+ Sbjct 179 NLTQAAMEGKLDPVVGRAKEVERIMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNN 238 Query 237 EVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAG 296 EVPETLKDKQLY+LDLGSLVAGSRYRGDFEERLKKVLKEIN RGDIILFIDE+HTLVGAG Sbjct 239 EVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAG 298 Query 297 AAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTI 356 AAEGAIDAASILKPKLARGELQTIGATTL+EYRK+IEKDAALERRFQPVQV EP VE +I Sbjct 299 AAEGAIDAASILKPKLARGELQTIGATTLEEYRKHIEKDAALERRFQPVQVPEPGVELSI 358 Query 357 EILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMT 416 EILKGLRDRYEAHHRV+ITDAA+ AAA LADRYINDRFLPDKAIDLIDEAGARMRI+RMT Sbjct 359 EILKGLRDRYEAHHRVTITDAALAAAAQLADRYINDRFLPDKAIDLIDEAGARMRIKRMT 418 Query 417 APPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVV 476 APPDLREFDEKIAE RREKESAIDAQDFEKAA LRD EK L+A+RAEREKQWR+GD+DV Sbjct 419 APPDLREFDEKIAETRREKESAIDAQDFEKAAGLRDTEKKLIAERAEREKQWRAGDMDVA 478 Query 477 AEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTR 536 A VD+EQIAEVLGNWTGIPVFKLTE ETTRLLRME+ELHKRIIGQEDA+KAVS+AIRRTR Sbjct 479 AVVDEEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAIKAVSRAIRRTR 538 Query 537 AGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFG 596 AGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFG+DDALIQIDMGEFHDRFTASRLFG Sbjct 539 AGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFG 598 Query 597 APPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVD 656 APPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAH EIYN+LLQVLEDGRLTDGQGR VD Sbjct 599 APPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRMVD 658 Query 657 FKNTVLIFTSNLGTSDISKPVGLGF-SKGGGENDYERMKQKVNDELKKHFRPEFLNRIDD 715 FKNTVLIFTSNLGT DISK VG+GF S E+ YERMKQKVNDELKKHFRPEFLNRID+ Sbjct 659 FKNTVLIFTSNLGTKDISKAVGMGFQSSDNTEDAYERMKQKVNDELKKHFRPEFLNRIDE 718 Query 716 IIVFHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRR 775 I+VFHQLT+E+I++MVDLMI RV LK+KDM + ++D AK+LLAKRGFDPVLGARPLRR Sbjct 719 IVVFHQLTQEQIVQMVDLMIGRVRDALKAKDMDIEVSDRAKSLLAKRGFDPVLGARPLRR 778 Query 776 TIQREIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGP-GEDAVFTFTGTRKPPAEPD 831 TIQREIED LSEKILF EV G++V VDV+ WDGE EDA FTFTG +P A D Sbjct 779 TIQREIEDTLSEKILFGEVAAGELVKVDVEGWDGESERTEDAKFTFTGAPRPDAPQD 835 >gi|258651101|ref|YP_003200257.1| ATPase AAA-2 domain-containing protein [Nakamurella multipartita DSM 44233] gi|258554326|gb|ACV77268.1| ATPase AAA-2 domain protein [Nakamurella multipartita DSM 44233] Length=846 Score = 1437 bits (3719), Expect = 0.0, Method: Compositional matrix adjust. Identities = 713/847 (85%), Positives = 776/847 (92%), Gaps = 4/847 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAK+LESLGI+LEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 +QVEEIIGQGQQ+PSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 AQVEEIIGQGQQSPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGA+L RVRQQV+QLLSGYQGKE A A GGR G+PSTSLVLDQFGRNLT Sbjct 121 AQVLVKLGADLNRVRQQVLQLLSGYQGKETA-AAEGGRS--EGTPSTSLVLDQFGRNLTQ 177 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 +A EGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAI+ G+VP+ Sbjct 178 SAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIIRGDVPQ 237 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDK LYTLDLGSLVAGSRYRGDFEERLKKVLKEI TRGDII+FIDE+HTLVGAGAAEG Sbjct 238 TLKDKHLYTLDLGSLVAGSRYRGDFEERLKKVLKEIRTRGDIIMFIDEIHTLVGAGAAEG 297 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKP LARGELQTIGATTLDEYRKY+EKDAALERRFQP+QVGEPTV HTIEILK Sbjct 298 AIDAASILKPMLARGELQTIGATTLDEYRKYVEKDAALERRFQPIQVGEPTVAHTIEILK 357 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHR++ITD A+V+AATLADRYI+DR+LPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 358 GLRDRYEAHHRITITDDALVSAATLADRYISDRYLPDKAIDLIDEAGARMRIRRMTAPPD 417 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LR+FDEK+A RR+KESAIDAQDFEKAA+LRD EK L+A+++EREK W+ GDLDV++EVD Sbjct 418 LRDFDEKLAGVRRDKESAIDAQDFEKAAALRDTEKQLLARKSEREKAWKDGDLDVISEVD 477 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVL NWTGIPVFKLTE ETTRLL+MEEELHKRIIGQ+ AVKAVS+AIRRTRAGLK Sbjct 478 DEQIAEVLANWTGIPVFKLTEEETTRLLKMEEELHKRIIGQDQAVKAVSQAIRRTRAGLK 537 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGKTEL+KALA FLFGD+DALIQ+DMGEFHDR+TASRLFGAPPG Sbjct 538 DPKRPSGSFIFAGPSGVGKTELTKALAEFLFGDEDALIQVDMGEFHDRYTASRLFGAPPG 597 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQ+IYN+LLQVLEDGRLTDGQGRTVDFKNT Sbjct 598 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQDIYNTLLQVLEDGRLTDGQGRTVDFKNT 657 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGG-ENDYERMKQKVNDELKKHFRPEFLNRIDDIIVF 719 V++FTSNLGT DISK VG+GF +G E++YERMKQKVNDELK+HFRPEFLNRIDD++VF Sbjct 658 VIVFTSNLGTQDISKAVGMGFQQGNNSESNYERMKQKVNDELKRHFRPEFLNRIDDVVVF 717 Query 720 HQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQR 779 HQLT EEI +MVDLM+ RV L++KDM+L LTDAAK LL +RGFDPVLGARPLRRTIQR Sbjct 718 HQLTTEEINQMVDLMLKRVEAALRNKDMSLELTDAAKTLLGERGFDPVLGARPLRRTIQR 777 Query 780 EIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHS 839 EIED+LSEKILF+E+ PGQ++ VDV + FTF G +P PD AG Sbjct 778 EIEDKLSEKILFDEIRPGQIILVDVQDATDVTGKPTKEFTFRGEPRPSEVPDAVPAGLAI 837 Query 840 AGGPEPA 846 GPE A Sbjct 838 DAGPEGA 844 >gi|284989236|ref|YP_003407790.1| ATPase AAA-2 domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284062481|gb|ADB73419.1| ATPase AAA-2 domain protein [Geodermatophilus obscurus DSM 43160] Length=841 Score = 1425 bits (3689), Expect = 0.0, Method: Compositional matrix adjust. Identities = 716/849 (85%), Positives = 773/849 (92%), Gaps = 11/849 (1%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAK+LESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 QVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 QQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGA+L RVRQQVIQLLSGYQGKE A AG G G+PSTSLVLDQFGRNLT Sbjct 121 AQVLVKLGADLNRVRQQVIQLLSGYQGKEPAAAG----GPAEGTPSTSLVLDQFGRNLTQ 176 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AA + KLDPVIGR KEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIV GEVPE Sbjct 177 AARDSKLDPVIGRAKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPE 236 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLG+LVAGSRYRGDFEERLKKVLKEI TRGDIILFIDE+HTLVGAGAAEG Sbjct 237 TLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEG 296 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKP LARGELQTIGATTLDEYRK++EKDAALERRFQP+QVGEPT+ HTIEILK Sbjct 297 AIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVGEPTLTHTIEILK 356 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHR+SITD A+VAAATLADRYI+DRFLPDKAIDLIDEAGARMRI+RMTAPPD Sbjct 357 GLRDRYEAHHRISITDGALVAAATLADRYISDRFLPDKAIDLIDEAGARMRIKRMTAPPD 416 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFD++IA RREKESAIDAQDFEKAASLRD+EKTL++++AEREKQW++GD+DVVAEVD Sbjct 417 LREFDDRIAAIRREKESAIDAQDFEKAASLRDKEKTLLSEKAEREKQWKAGDMDVVAEVD 476 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DEQIAEVL NWTGIPVFKLTE ETTRLLRME+ELHKRIIGQE+A+K+VS+AIRRTRAGLK Sbjct 477 DEQIAEVLANWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEEAIKSVSQAIRRTRAGLK 536 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DP+RP GSFIFAGPSGVGKTEL+KALA FLFG+DDALIQIDMGEFHDRFT SRL GAPPG Sbjct 537 DPRRPGGSFIFAGPSGVGKTELAKALAQFLFGEDDALIQIDMGEFHDRFTVSRLVGAPPG 596 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGY+EGGQLTEKVRRKPFSVVLFDEIEKAH +++N+LLQVLEDGRLTDGQGR VDFKNT Sbjct 597 YVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHADVFNTLLQVLEDGRLTDGQGRIVDFKNT 656 Query 661 VLIFTSNLGTSDISKPVGLGFSKGG-GENDYERMKQKVNDELKKHFRPEFLNRIDDIIVF 719 +LI T+NLGT DISK VGLGF G +++YERMK KVN+ELK+HFRPEFLNRIDDI+VF Sbjct 657 ILILTTNLGTRDISKAVGLGFQVGNDSQSNYERMKNKVNEELKQHFRPEFLNRIDDIVVF 716 Query 720 HQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQR 779 HQLT +EII +VDLM++RV GQL +KDM+L +T AAK LLA RGFDPVLGARPLRRTIQR Sbjct 717 HQLTEDEIIEIVDLMVARVEGQLANKDMSLEITPAAKKLLAHRGFDPVLGARPLRRTIQR 776 Query 780 EIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHS 839 EIED LSEKIL+ E+ GQ++ VDV EG G DA FTF G KP PD A S Sbjct 777 EIEDALSEKILYGELTAGQIIVVDV-----EGEGTDAKFTFRGEAKPIDLPDTPPV-ALS 830 Query 840 AGGPEPAAR 848 G EP A+ Sbjct 831 VGDEEPPAQ 839 >gi|300790533|ref|YP_003770824.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis mediterranei U32] gi|299800047|gb|ADJ50422.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis mediterranei U32] gi|340532220|gb|AEK47425.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis mediterranei S699] Length=831 Score = 1421 bits (3678), Expect = 0.0, Method: Compositional matrix adjust. Identities = 717/817 (88%), Positives = 757/817 (93%), Gaps = 13/817 (1%) Query 22 MLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPFT 81 MLNHNYIGTEHILLGLIHEGEGVAAK+LESLGI+LEGVR QVEEIIGQGQQAPSGHIPFT Sbjct 1 MLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQQAPSGHIPFT 60 Query 82 PRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQL 141 PRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGA+L RVRQQV+QL Sbjct 61 PRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVLQL 120 Query 142 LSGYQG-KEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERV 200 LSGYQG KE+ E G+G RG G+PS+SLVLDQFGRN+T A EGKLDPVIGR KEIERV Sbjct 121 LSGYQGGKESTETGSG-RG--EGTPSSSLVLDQFGRNMTVLAREGKLDPVIGRGKEIERV 177 Query 201 MQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYTLDLGSLVAGSR 260 MQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQ+IV GEVPETLKDKQLYTLDLGSLVAGSR Sbjct 178 MQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQSIVKGEVPETLKDKQLYTLDLGSLVAGSR 237 Query 261 YRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTI 320 YRGDFEERLKKVLKEI TRGDIILFIDELHTLVGAGAAEGAIDAASILKP LARGELQTI Sbjct 238 YRGDFEERLKKVLKEIKTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTI 297 Query 321 GATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAMV 380 GATTL+EYRKYIEKDAALERRFQP+QVGEP++EHTIEILKGLRDRYEAHHRVSITD+A+V Sbjct 298 GATTLEEYRKYIEKDAALERRFQPIQVGEPSLEHTIEILKGLRDRYEAHHRVSITDSALV 357 Query 381 AAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAID 440 AAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIA RR+KESAID Sbjct 358 AAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIANVRRDKESAID 417 Query 441 AQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVDDEQIAEVLGNWTGIPVFKLT 500 AQDFE+AA LRD EKTL+ Q+ EREKQW+ GDLDVVAEVDDEQIAEVL NWTGIPVFKLT Sbjct 418 AQDFERAARLRDEEKTLLGQKGEREKQWKDGDLDVVAEVDDEQIAEVLANWTGIPVFKLT 477 Query 501 EAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT 560 E ETTRLLRMEEELHKRIIGQEDAVKAVS+AIRRTRAGLKDPKRPSGSFIFAGPSGVGKT Sbjct 478 EEETTRLLRMEEELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT 537 Query 561 ELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFS 620 ELSKALA FLFG+DDALIQIDMGEFHDR+TASRLFGAPPGYVGYEEGGQLTEKVRRKPFS Sbjct 538 ELSKALAAFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFS 597 Query 621 VVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKPVGLG 680 VVLFDEIEKAHQEIYN+LLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISK V LG Sbjct 598 VVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKSVSLG 657 Query 681 FSKGGGEND----YERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREEIIRMVDLMIS 736 F+ G ND YE+MKQKVN+E+KKHFRPEFLNRIDDIIVFHQLT+E+II MVDLMI Sbjct 658 FA---GSNDTGTRYEKMKQKVNEEMKKHFRPEFLNRIDDIIVFHQLTQEQIIMMVDLMIG 714 Query 737 RVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGP 796 RV QL++KDM L LT AK+LLAKRGFDPVLGARPLRRTIQREIEDQLSEKILF EV P Sbjct 715 RVETQLRAKDMELELTAKAKSLLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVEP 774 Query 797 GQVVTVDVDNWDG--EGPGEDAVFTFTGTRKPPAEPD 831 GQ++ VDV+ W G E + A FTF G R+P + PD Sbjct 775 GQIILVDVEGWSGNPEDKDDQAKFTFRGERRPSSIPD 811 Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 56/138 (41%), Positives = 73/138 (53%), Gaps = 23/138 (16%) Query 5 FTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVE 64 FT RA++V+ L+ EA L HNYIGTEHILLGLI EGEGVAA+ L LG L VR QV Sbjct 59 FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVL 118 Query 65 EIIG------QGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEG 118 +++ + + SG TP + VL+ Q G N + L REG+ Sbjct 119 QLLSGYQGGKESTETGSGRGEGTPSSSLVLD-------QFGRN-------MTVLAREGK- 163 Query 119 VAAQVLVKLGAELTRVRQ 136 ++ G E+ RV Q Sbjct 164 --LDPVIGRGKEIERVMQ 179 >gi|336180205|ref|YP_004585580.1| ATPase AAA-2 domain-containing protein [Frankia symbiont of Datisca glomerata] gi|334861185|gb|AEH11659.1| ATPase AAA-2 domain protein [Frankia symbiont of Datisca glomerata] Length=834 Score = 1389 bits (3594), Expect = 0.0, Method: Compositional matrix adjust. Identities = 698/831 (84%), Positives = 756/831 (91%), Gaps = 8/831 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAK+LESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGA+L RVRQQVIQLLSGYQGK + T G E G+PSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGADLNRVRQQVIQLLSGYQGK--GDPATAGAPSE-GTPSTSLVLDQFGRNLTA 177 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AA E KLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIV GEVPE Sbjct 178 AARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPE 237 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLG+LVAGSRYRGDFEERLKKVLKEI TRGDIILFIDELHTLVGAGAAEG Sbjct 238 TLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEG 297 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKP LARGELQTIGATTLDEYRK++EKDAALERRFQP+QV EP+V HTIEILK Sbjct 298 AIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVAEPSVAHTIEILK 357 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD A+VAAA+LADRYI+DRFLPDKAIDLIDEAG+RMRIRRMTAPPD Sbjct 358 GLRDRYEAHHRVSITDGALVAAASLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPD 417 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDE+IA RR+KESAIDAQDFEKAASLRDREKTL+A++A+REK+W++GD+DVVAEV Sbjct 418 LREFDERIANVRRDKESAIDAQDFEKAASLRDREKTLLAEKAKREKEWKAGDMDVVAEVG 477 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DE+IAEVL WTGIPVFKLTE ET RLLRME+ELH+R+IGQ+ A+KAVS+AIRRTRAGLK Sbjct 478 DEEIAEVLAIWTGIPVFKLTEEETARLLRMEDELHRRVIGQQQAIKAVSQAIRRTRAGLK 537 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRP GSFIFAGPSGVGKTELSK LA FLFGD+DALIQ+DM E+ ++ T SRL G+PPG Sbjct 538 DPKRPGGSFIFAGPSGVGKTELSKTLAEFLFGDEDALIQLDMSEYMEKHTVSRLVGSPPG 597 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTE+VRRKPFSVVLFDE+EKAH +++N+LLQ+LEDGRLTD QGR VDFKNT Sbjct 598 YVGYEEGGQLTERVRRKPFSVVLFDEVEKAHPDVFNTLLQILEDGRLTDSQGRLVDFKNT 657 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLI TSNLGT DISK G+GF+ G G DYERMK KV DELK+HFRPEFLNRIDDIIVFH Sbjct 658 VLIMTSNLGTRDISKGPGIGFATGQGAIDYERMKAKVQDELKQHFRPEFLNRIDDIIVFH 717 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QL+ EII++VDLM++RV QLK+KDMAL LT AAKALLAK+G+DPVLGARPLRRTIQRE Sbjct 718 QLSEAEIIQIVDLMLARVDIQLKNKDMALELTPAAKALLAKKGYDPVLGARPLRRTIQRE 777 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPD 831 IED LSEKIL+ + PG++V DV EG GE A F F G KP PD Sbjct 778 IEDVLSEKILYGTLKPGEIVVGDV-----EGEGEAAKFVFRGEPKPTQVPD 823 >gi|291303744|ref|YP_003515022.1| ATPase AAA-2 domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290572964|gb|ADD45929.1| ATPase AAA-2 domain protein [Stackebrandtia nassauensis DSM 44728] Length=854 Score = 1380 bits (3573), Expect = 0.0, Method: Compositional matrix adjust. Identities = 686/833 (83%), Positives = 752/833 (91%), Gaps = 4/833 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAK+LESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 QVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 QQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVL+KLGA+L RVRQQV+QLLSGYQGKE A A GG S S+S VLDQFGRNLT Sbjct 121 AQVLIKLGADLNRVRQQVLQLLSGYQGKEPAGATAGGSASGEQSQSSSPVLDQFGRNLTQ 180 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AA +GKLDPVIGREKEIERVMQVLSRR+KNNPVLIGEPGVGKTA VEGLAQAIV G VPE Sbjct 181 AARDGKLDPVIGREKEIERVMQVLSRRSKNNPVLIGEPGVGKTAAVEGLAQAIVKGSVPE 240 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDK LYTLDLG+LVAGSRYRGDFEERLKKVLKEI TRGDIILFIDE+HTLVGAGAAEG Sbjct 241 TLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEG 300 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKP LARGELQTIGATTLDEYRK++EKDAALERRFQP+QV EP++ HTIEILK Sbjct 301 AIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVAEPSLSHTIEILK 360 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITD A+VAAATLADRYI+DRFLPDKAIDLIDEAGARMRIRRMTAPPD Sbjct 361 GLRDRYEAHHRVSITDGALVAAATLADRYISDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDE+IA+AR++KESAIDAQDFE+AA LRD EK L QR +REK+W++GDLD V EVD Sbjct 421 LREFDERIAQARKDKESAIDAQDFERAAQLRDNEKQLQDQREKREKEWKAGDLDTVTEVD 480 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DE IAEVL NWTGIPV+KLTE ET+RLL+MEEELHKRIIGQ DAVKAVS+AIRRTRAGLK Sbjct 481 DEMIAEVLANWTGIPVYKLTEEETSRLLKMEEELHKRIIGQHDAVKAVSQAIRRTRAGLK 540 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRPSGSFIFAGPSGVGK+ELSKALA FLFG +DALIQ+DM EFHDR+T SRL GAPPG Sbjct 541 DPKRPSGSFIFAGPSGVGKSELSKALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPG 600 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGY+EGGQLTEKVRRKPFSVVLFDEIEKAH E++N+LLQ+LEDGRLTDGQGR VDFKNT Sbjct 601 YVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHSEVFNTLLQILEDGRLTDGQGRIVDFKNT 660 Query 661 VLIFTSNLGTSDISKPVGLGF-SKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVF 719 VLI T+NLGT D++K V LGF ++ GGE+DYERMK KVNDELK+HFRPEFLNRIDD IVF Sbjct 661 VLILTTNLGTKDVAKAVSLGFQAETGGEDDYERMKLKVNDELKQHFRPEFLNRIDDTIVF 720 Query 720 HQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQR 779 +L+ EII++VDLM++R+ QLK++DM++ +T AAK L +G+DPVLGARPLRRTIQR Sbjct 721 PKLSENEIIKIVDLMVARIEEQLKNRDMSMEITQAAKEFLGHKGYDPVLGARPLRRTIQR 780 Query 780 EIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAE-PD 831 EIED LSEKILF+E+ PGQ+V VD + + E+A TF G+ KP E PD Sbjct 781 EIEDTLSEKILFDELVPGQIVVVDCEGDPAD--FENAHLTFRGSDKPAVEVPD 831 >gi|260578411|ref|ZP_05846325.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Corynebacterium jeikeium ATCC 43734] gi|258603433|gb|EEW16696.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Corynebacterium jeikeium ATCC 43734] Length=885 Score = 1377 bits (3565), Expect = 0.0, Method: Compositional matrix adjust. Identities = 694/843 (83%), Positives = 755/843 (90%), Gaps = 14/843 (1%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEAR LNHNYIGTEHILLGLI EGEGVAAK+LES+GISL+ VR Sbjct 1 MFERFTDRARRVVVLAQEEARALNHNYIGTEHILLGLIQEGEGVAAKALESMGISLDAVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 ++V++IIG G PSG+IPFTPRAKKVLEL+LREALQLGH YIGTEHILLGLIREGEGVA Sbjct 61 TEVKDIIGTGGHPPSGYIPFTPRAKKVLELALREALQLGHKYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAG----TGGRGGES-------GSPSTSL 169 AQVLVKLGA+L+RVRQQVIQLLSGY+G E AG T G G G S SL Sbjct 121 AQVLVKLGADLSRVRQQVIQLLSGYEGNEEESAGGEPATAGVGSSPEGAPSRPGQKSNSL 180 Query 170 VLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 229 VLDQFGRNLT AA +GKLDPV+GRE EIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL Sbjct 181 VLDQFGRNLTQAAKDGKLDPVVGRENEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGL 240 Query 230 AQAIVHGEVPETLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDEL 289 A IV+G+VPETLKDKQLY+LDLGSLVAGSRYRGDFEERLKKVLKEIN RGDIILFIDE+ Sbjct 241 ALDIVNGKVPETLKDKQLYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEI 300 Query 290 HTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGE 349 HTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRK+IEKDAALERRFQPVQV E Sbjct 301 HTLVGAGAAEGAIDAASILKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPE 360 Query 350 PTVEHTIEILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGAR 409 P+VE T+EILKGLRDRYEAHHRVSITD A+ AAA LADRYINDRFLPDKA+DLIDEAGAR Sbjct 361 PSVELTVEILKGLRDRYEAHHRVSITDGALKAAAQLADRYINDRFLPDKAVDLIDEAGAR 420 Query 410 MRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWR 469 MRI+RMTAP +++ D+KIAE RR+KE+AID QDFEKAASLRD E+ L +RAE+EK WR Sbjct 421 MRIKRMTAPKAIQDIDDKIAEVRRKKEAAIDEQDFEKAASLRDDERKLGEERAEKEKAWR 480 Query 470 SGDLDVVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVS 529 +G+LD VAEV +EQIAEV+GNWTGIPVFKLTE E+TRLL ME+ELHKRIIGQ+DAVKAVS Sbjct 481 AGELDEVAEVGEEQIAEVMGNWTGIPVFKLTEEESTRLLHMEDELHKRIIGQDDAVKAVS 540 Query 530 KAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRF 589 +AIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALA FLFGDDDALIQIDMGEFHD+F Sbjct 541 RAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGDDDALIQIDMGEFHDKF 600 Query 590 TASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTD 649 TASRLFGAPPGYVGY+EGGQLTEKVRRKPFSVVLFDEIEKAH EIYN+LLQVLEDGRLTD Sbjct 601 TASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEIEKAHTEIYNTLLQVLEDGRLTD 660 Query 650 GQGRTVDFKNTVLIFTSNLGTSDISKPVGLGFSKGG---GENDYERMKQKVNDELKKHFR 706 GQGR VDFKNTVLIFTSNLGT DISK VG+GFS G E YERMKQKV+DELKKHFR Sbjct 661 GQGRMVDFKNTVLIFTSNLGTRDISKAVGMGFSSSGEADEETQYERMKQKVDDELKKHFR 720 Query 707 PEFLNRIDDIIVFHQLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDP 766 PEFLNRIDDI+VFHQLTRE+I++MVDL++ RV L++KDM L LT+ AK+LLAKRGFDP Sbjct 721 PEFLNRIDDIVVFHQLTREQIVQMVDLLLGRVRTALQAKDMDLELTEQAKSLLAKRGFDP 780 Query 767 VLGARPLRRTIQREIEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKP 826 VLGARPLRRTIQREIEDQLSEKILF E+G G++VTVDV+NWDGE G+DA F F KP Sbjct 781 VLGARPLRRTIQREIEDQLSEKILFGEIGAGEIVTVDVENWDGESKGDDAKFVFGTKPKP 840 Query 827 PAE 829 E Sbjct 841 LPE 843 >gi|288920479|ref|ZP_06414787.1| ATPase AAA-2 domain protein [Frankia sp. EUN1f] gi|288348131|gb|EFC82400.1| ATPase AAA-2 domain protein [Frankia sp. EUN1f] Length=834 Score = 1377 bits (3563), Expect = 0.0, Method: Compositional matrix adjust. Identities = 700/831 (85%), Positives = 758/831 (92%), Gaps = 8/831 (0%) Query 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAK+LESLGISLEGVR Sbjct 1 MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR 60 Query 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA Sbjct 61 SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA 120 Query 121 AQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTA 180 AQVLVKLGA+L RVRQQVIQLLSGYQGK + T G E G+PSTSLVLDQFGRNLTA Sbjct 121 AQVLVKLGADLNRVRQQVIQLLSGYQGK--GDPATAGAPAE-GTPSTSLVLDQFGRNLTA 177 Query 181 AAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE 240 AA E KLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIV GEVPE Sbjct 178 AARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPE 237 Query 241 TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG 300 TLKDKQLYTLDLG+LVAGSRYRGDFEERLKKVLKEI TRGDIILFIDELHTLVGAGAAEG Sbjct 238 TLKDKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEG 297 Query 301 AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILK 360 AIDAASILKP LARGELQTIGATTLDEYRK++EKDAALERRFQP+QV EP+V HTIEILK Sbjct 298 AIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVAEPSVAHTIEILK 357 Query 361 GLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD 420 GLRDRYEAHHRVSITDAA+VAAA+LADRYI+DRFLPDKAIDLIDEAG+RMRIRRMTAPPD Sbjct 358 GLRDRYEAHHRVSITDAALVAAASLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPD 417 Query 421 LREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD 480 LREFDE+IA RR+KESAIDAQDFEKAASLRD+EKTL+A++A+REK+W++GD+DVVAEV Sbjct 418 LREFDERIANVRRDKESAIDAQDFEKAASLRDKEKTLLAEKAKREKEWKAGDMDVVAEVG 477 Query 481 DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLK 540 DE+IAEVL WTGIPVFKLTE ET RLLRME+ELHKR+IGQE A+KAVS+AIRRTRAGLK Sbjct 478 DEEIAEVLAIWTGIPVFKLTEEETARLLRMEDELHKRVIGQEQAIKAVSQAIRRTRAGLK 537 Query 541 DPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPG 600 DPKRP GSFIFAGPSGVGKTELSK LA FLFGD+DALIQ+DM E+ ++ T SRL G+PPG Sbjct 538 DPKRPGGSFIFAGPSGVGKTELSKTLAEFLFGDEDALIQLDMSEYMEKHTVSRLVGSPPG 597 Query 601 YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNT 660 YVGYEEGGQLTE+VRRKPFSVVLFDE+EKAH +++N+LLQ+LEDGRLTD QGR VDFKNT Sbjct 598 YVGYEEGGQLTERVRRKPFSVVLFDEVEKAHPDVFNTLLQILEDGRLTDSQGRLVDFKNT 657 Query 661 VLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH 720 VLI TSNLGT DISK G+GF+ G G DYERMK KV DELK+HFRPEFLNRIDDIIVFH Sbjct 658 VLIMTSNLGTRDISKGPGIGFATGQGAIDYERMKAKVQDELKQHFRPEFLNRIDDIIVFH 717 Query 721 QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQRE 780 QL+ EII++VDLM++RV QLK+KDMAL LT AAK LLAKRG+DPVLGARPLRRTIQRE Sbjct 718 QLSEVEIIQIVDLMLARVDSQLKNKDMALELTPAAKVLLAKRGYDPVLGARPLRRTIQRE 777 Query 781 IEDQLSEKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRKPPAEPD 831 IED LSEKIL+ + PG++V DV EG GE+A F F G KP + PD Sbjct 778 IEDVLSEKILYGTLRPGEIVVGDV-----EGEGEEAKFVFRGEPKPNSVPD 823 Lambda K H 0.317 0.136 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2062512043194 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40