BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3598c Length=505 Score E Sequences producing significant alignments: (Bits) Value gi|15610734|ref|NP_218115.1| lysyl-tRNA synthetase [Mycobacteriu... 1021 0.0 gi|289445193|ref|ZP_06434937.1| lysyl-tRNA synthetase 1 lysS [My... 1020 0.0 gi|289747435|ref|ZP_06506813.1| lysyl-tRNA synthetase 1 lyss [My... 1019 0.0 gi|340628563|ref|YP_004747015.1| lysyl-tRNA synthetase [Mycobact... 1016 0.0 gi|254552712|ref|ZP_05143159.1| lysyl-tRNA synthetase [Mycobacte... 917 0.0 gi|289748113|ref|ZP_06507491.1| lysyl-tRNA synthetase 1 lysS [My... 887 0.0 gi|296166663|ref|ZP_06849089.1| lysine--tRNA ligase [Mycobacteri... 885 0.0 gi|41406557|ref|NP_959393.1| lysyl-tRNA synthetase [Mycobacteriu... 882 0.0 gi|118465579|ref|YP_879834.1| lysyl-tRNA synthetase [Mycobacteri... 880 0.0 gi|254823223|ref|ZP_05228224.1| lysyl-tRNA synthetase [Mycobacte... 880 0.0 gi|342862444|ref|ZP_08719084.1| lysyl-tRNA synthetase [Mycobacte... 877 0.0 gi|240172842|ref|ZP_04751501.1| lysyl-tRNA synthetase [Mycobacte... 864 0.0 gi|15827030|ref|NP_301293.1| lysyl-tRNA synthetase [Mycobacteriu... 862 0.0 gi|183985070|ref|YP_001853361.1| lysyl-tRNA synthetase 1 LysS [M... 853 0.0 gi|333992528|ref|YP_004525142.1| lysyl-tRNA synthetase [Mycobact... 852 0.0 gi|118619355|ref|YP_907687.1| lysyl-tRNA synthetase [Mycobacteri... 847 0.0 gi|120406308|ref|YP_956137.1| lysyl-tRNA synthetase [Mycobacteri... 843 0.0 gi|108801721|ref|YP_641918.1| lysyl-tRNA synthetase [Mycobacteri... 829 0.0 gi|126437708|ref|YP_001073399.1| lysyl-tRNA synthetase [Mycobact... 828 0.0 gi|118471596|ref|YP_890315.1| lysyl-tRNA synthetase [Mycobacteri... 806 0.0 gi|145222020|ref|YP_001132698.1| lysyl-tRNA synthetase [Mycobact... 792 0.0 gi|161598447|ref|YP_116617.2| lysyl-tRNA synthetase [Nocardia fa... 787 0.0 gi|169627648|ref|YP_001701297.1| lysyl-tRNA synthetase (LysS) [M... 779 0.0 gi|54013883|dbj|BAD55253.1| putative lysyl-tRNA synthetase [Noca... 776 0.0 gi|325675034|ref|ZP_08154721.1| lysine--tRNA ligase [Rhodococcus... 771 0.0 gi|312138065|ref|YP_004005401.1| lysyl-tRNA synthetase [Rhodococ... 771 0.0 gi|226363746|ref|YP_002781528.1| lysyl-tRNA synthetase [Rhodococ... 761 0.0 gi|111021392|ref|YP_704364.1| lysyl-tRNA synthetase [Rhodococcus... 758 0.0 gi|333918012|ref|YP_004491593.1| Lysyl-tRNA synthetase [Amycolic... 750 0.0 gi|326384068|ref|ZP_08205751.1| lysyl-tRNA synthetase [Gordonia ... 739 0.0 gi|226304130|ref|YP_002764088.1| lysyl-tRNA synthetase [Rhodococ... 735 0.0 gi|262203856|ref|YP_003275064.1| lysyl-tRNA synthetase [Gordonia... 729 0.0 gi|343924361|ref|ZP_08763911.1| lysyl-tRNA synthetase [Gordonia ... 725 0.0 gi|300790538|ref|YP_003770829.1| lysyl-tRNA synthetase, class II... 712 0.0 gi|302530771|ref|ZP_07283113.1| lysyl-tRNA synthetase [Streptomy... 703 0.0 gi|134097022|ref|YP_001102683.1| lysyl-tRNA synthetase class II ... 699 0.0 gi|334564008|ref|ZP_08516999.1| lysyl-tRNA synthetase [Corynebac... 696 0.0 gi|256374484|ref|YP_003098144.1| lysyl-tRNA synthetase [Actinosy... 693 0.0 gi|336324760|ref|YP_004604726.1| lysyl-tRNA synthetase [Coryneba... 687 0.0 gi|340793461|ref|YP_004758924.1| lysyl-tRNA synthetase [Coryneba... 686 0.0 gi|152964545|ref|YP_001360329.1| lysyl-tRNA synthetase [Kineococ... 675 0.0 gi|296392865|ref|YP_003657749.1| lysyl-tRNA synthetase [Segnilip... 669 0.0 gi|334338089|ref|YP_004543241.1| Lysyl-tRNA synthetase [Isopteri... 666 0.0 gi|213965141|ref|ZP_03393339.1| lysyl-tRNA synthetase [Corynebac... 664 0.0 gi|317507814|ref|ZP_07965515.1| lysyl-tRNA synthetase [Segnilipa... 661 0.0 gi|269796472|ref|YP_003315927.1| lysyl-tRNA synthetase (class II... 660 0.0 gi|172041369|ref|YP_001801083.1| lysyl-tRNA synthetase [Coryneba... 658 0.0 gi|269957752|ref|YP_003327541.1| lysyl-tRNA synthetase [Xylanimo... 656 0.0 gi|260578417|ref|ZP_05846331.1| lysine--tRNA ligase [Corynebacte... 655 0.0 gi|68535359|ref|YP_250064.1| lysyl-tRNA synthetase [Corynebacter... 655 0.0 >gi|15610734|ref|NP_218115.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv] gi|15843211|ref|NP_338248.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551] gi|31794775|ref|NP_857268.1| lysyl-tRNA synthetase [Mycobacterium bovis AF2122/97] 62 more sequence titles Length=505 Score = 1021 bits (2640), Expect = 0.0, Method: Compositional matrix adjust. Identities = 504/505 (99%), Positives = 505/505 (100%), Gaps = 0/505 (0%) Query 1 VSAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED 60 +SAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED Sbjct 1 MSAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED 60 Query 61 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH 120 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH Sbjct 61 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH 120 Query 121 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL 180 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL Sbjct 121 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL 180 Query 181 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR 240 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR Sbjct 181 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR 240 Query 241 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI 300 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI Sbjct 241 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI 300 Query 301 GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAI 360 GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAI Sbjct 301 GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAI 360 Query 361 HDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRG 420 HDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRG Sbjct 361 HDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRG 420 Query 421 IELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGID 480 IELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGID Sbjct 421 IELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGID 480 Query 481 RLLMSLTGLSIRETVLFPIVRPHSN 505 RLLMSLTGLSIRETVLFPIVRPHSN Sbjct 481 RLLMSLTGLSIRETVLFPIVRPHSN 505 >gi|289445193|ref|ZP_06434937.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis CPHL_A] gi|289418151|gb|EFD15352.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis CPHL_A] Length=505 Score = 1020 bits (2637), Expect = 0.0, Method: Compositional matrix adjust. Identities = 503/505 (99%), Positives = 505/505 (100%), Gaps = 0/505 (0%) Query 1 VSAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED 60 +SAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED Sbjct 1 MSAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED 60 Query 61 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH 120 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH Sbjct 61 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH 120 Query 121 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL 180 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL Sbjct 121 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL 180 Query 181 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR 240 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR Sbjct 181 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR 240 Query 241 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI 300 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI Sbjct 241 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI 300 Query 301 GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAI 360 GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRG+ADSLGLEKDPAI Sbjct 301 GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGLADSLGLEKDPAI 360 Query 361 HDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRG 420 HDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRG Sbjct 361 HDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRG 420 Query 421 IELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGID 480 IELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGID Sbjct 421 IELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGID 480 Query 481 RLLMSLTGLSIRETVLFPIVRPHSN 505 RLLMSLTGLSIRETVLFPIVRPHSN Sbjct 481 RLLMSLTGLSIRETVLFPIVRPHSN 505 >gi|289747435|ref|ZP_06506813.1| lysyl-tRNA synthetase 1 lyss [Mycobacterium tuberculosis 02_1987] gi|294993718|ref|ZP_06799409.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis 210] gi|298527077|ref|ZP_07014486.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis 94_M4241A] gi|289687963|gb|EFD55451.1| lysyl-tRNA synthetase 1 lyss [Mycobacterium tuberculosis 02_1987] gi|298496871|gb|EFI32165.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis 94_M4241A] gi|326905437|gb|EGE52370.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis W-148] gi|339296417|gb|AEJ48528.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis CCDC5079] gi|339300018|gb|AEJ52128.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis CCDC5180] Length=505 Score = 1019 bits (2636), Expect = 0.0, Method: Compositional matrix adjust. Identities = 503/505 (99%), Positives = 504/505 (99%), Gaps = 0/505 (0%) Query 1 VSAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED 60 +SAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED Sbjct 1 MSAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED 60 Query 61 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH 120 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH Sbjct 61 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH 120 Query 121 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL 180 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL Sbjct 121 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL 180 Query 181 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR 240 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR Sbjct 181 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR 240 Query 241 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI 300 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI Sbjct 241 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI 300 Query 301 GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAI 360 GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAI Sbjct 301 GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAI 360 Query 361 HDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRG 420 HDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRG Sbjct 361 HDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRG 420 Query 421 IELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGID 480 IELATGYSELSDPVVQRERFADQARAAAAGDDE MVLDEDFLAALEYGMPPCTGTGMGID Sbjct 421 IELATGYSELSDPVVQRERFADQARAAAAGDDETMVLDEDFLAALEYGMPPCTGTGMGID 480 Query 481 RLLMSLTGLSIRETVLFPIVRPHSN 505 RLLMSLTGLSIRETVLFPIVRPHSN Sbjct 481 RLLMSLTGLSIRETVLFPIVRPHSN 505 >gi|340628563|ref|YP_004747015.1| lysyl-tRNA synthetase [Mycobacterium canettii CIPT 140010059] gi|340006753|emb|CCC45941.1| lysyl-tRNA synthetase 1 LYSS (lysine--tRNA ligase 1) (LYSRS 1) (lysine translase) [Mycobacterium canettii CIPT 140010059] Length=505 Score = 1016 bits (2626), Expect = 0.0, Method: Compositional matrix adjust. Identities = 501/505 (99%), Positives = 503/505 (99%), Gaps = 0/505 (0%) Query 1 VSAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED 60 +SAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED Sbjct 1 MSAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED 60 Query 61 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH 120 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH Sbjct 61 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH 120 Query 121 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL 180 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL Sbjct 121 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL 180 Query 181 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR 240 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR Sbjct 181 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR 240 Query 241 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI 300 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI Sbjct 241 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI 300 Query 301 GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAI 360 GTRQLPLPDGSVYDIDGEWATIQMYPSLS ALGEEITPQTTVDRLRGIADSLGLEKDPAI Sbjct 301 GTRQLPLPDGSVYDIDGEWATIQMYPSLSAALGEEITPQTTVDRLRGIADSLGLEKDPAI 360 Query 361 HDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRG 420 HDNRGFGHGKLIEELWE TVGKSLSAPTFVKDFPV+TTPLTRQHRSIPGVTEKWDLYLRG Sbjct 361 HDNRGFGHGKLIEELWEHTVGKSLSAPTFVKDFPVETTPLTRQHRSIPGVTEKWDLYLRG 420 Query 421 IELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGID 480 IELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGID Sbjct 421 IELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGID 480 Query 481 RLLMSLTGLSIRETVLFPIVRPHSN 505 RLLMSLTGLSIRETVLFPIVRPHSN Sbjct 481 RLLMSLTGLSIRETVLFPIVRPHSN 505 >gi|254552712|ref|ZP_05143159.1| lysyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=462 Score = 917 bits (2370), Expect = 0.0, Method: Compositional matrix adjust. Identities = 454/457 (99%), Positives = 455/457 (99%), Gaps = 0/457 (0%) Query 1 VSAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED 60 +SAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED Sbjct 1 MSAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED 60 Query 61 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH 120 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH Sbjct 61 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH 120 Query 121 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL 180 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL Sbjct 121 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL 180 Query 181 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR 240 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR Sbjct 181 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR 240 Query 241 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI 300 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI Sbjct 241 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI 300 Query 301 GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAI 360 GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAI Sbjct 301 GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAI 360 Query 361 HDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRG 420 HDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRG Sbjct 361 HDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRG 420 Query 421 IELATGYSELSDPVVQRERFADQARAAAAGDDEAMVL 457 IELA GYSELSDPVVQRERFADQARAAAAGD EAMVL Sbjct 421 IELAAGYSELSDPVVQRERFADQARAAAAGDAEAMVL 457 >gi|289748113|ref|ZP_06507491.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis T92] gi|289688700|gb|EFD56129.1| lysyl-tRNA synthetase 1 lysS [Mycobacterium tuberculosis T92] Length=439 Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/439 (99%), Positives = 439/439 (100%), Gaps = 0/439 (0%) Query 1 VSAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED 60 +SAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED Sbjct 1 MSAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED 60 Query 61 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH 120 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH Sbjct 61 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH 120 Query 121 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL 180 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL Sbjct 121 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL 180 Query 181 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR 240 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR Sbjct 181 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR 240 Query 241 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI 300 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI Sbjct 241 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI 300 Query 301 GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAI 360 GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAI Sbjct 301 GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAI 360 Query 361 HDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRG 420 HDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRG Sbjct 361 HDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRG 420 Query 421 IELATGYSELSDPVVQRER 439 IELATGYSELSDPVVQRER Sbjct 421 IELATGYSELSDPVVQRER 439 >gi|296166663|ref|ZP_06849089.1| lysine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897998|gb|EFG77578.1| lysine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=503 Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust. Identities = 439/504 (88%), Positives = 472/504 (94%), Gaps = 4/504 (0%) Query 2 SAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDI 61 ++ D A DLPEQFRIRRDKRARLLA+G +PYPVA+ RTHTLA+VRA HPDLP+DTAT+D+ Sbjct 4 ASEDAAADLPEQFRIRRDKRARLLAEGTEPYPVAIERTHTLAQVRADHPDLPVDTATDDV 63 Query 62 VGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHG 121 VGVAGRVIFARNSGKLCFATLQ+GDGT LQVM+SLDKVG +LDAWKADVDLGDIVYVHG Sbjct 64 VGVAGRVIFARNSGKLCFATLQEGDGTSLQVMLSLDKVGAESLDAWKADVDLGDIVYVHG 123 Query 122 AVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLR 181 VISSRRGELSVLAD W++AAKSLRPLPVAHKEMSEE+RVRQRYVDLIVRP+AR VAR R Sbjct 124 NVISSRRGELSVLADSWQLAAKSLRPLPVAHKEMSEEARVRQRYVDLIVRPQARTVARQR 183 Query 182 IAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRC 241 IAVVRAIR AL+RRGFLEVETP+LQTLAGGAAARPF THSNALDIDLYLRIAPELFLKRC Sbjct 184 IAVVRAIRNALERRGFLEVETPMLQTLAGGAAARPFVTHSNALDIDLYLRIAPELFLKRC 243 Query 242 IVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIG 301 +VGGFDKVFE+NRVFRNEGADSTHSPEFSMLETYQ YGTYDDSAVVTRELIQEVADEAIG Sbjct 244 VVGGFDKVFEVNRVFRNEGADSTHSPEFSMLETYQAYGTYDDSAVVTRELIQEVADEAIG 303 Query 302 TRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIH 361 TRQLPLPDGSVYDI GEWA+IQMYPSLS ALGEEITPQT V+RL IA LG+E I Sbjct 304 TRQLPLPDGSVYDIHGEWASIQMYPSLSAALGEEITPQTPVERLWAIAHRLGVE----IP 359 Query 362 DNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGI 421 ++RG+GHGKL+EELWE TVG +L+APTFV+DFPV+TTPLTRQHRSIPGVTEKWDLY+RGI Sbjct 360 EDRGYGHGKLVEELWEHTVGDTLTAPTFVRDFPVETTPLTRQHRSIPGVTEKWDLYVRGI 419 Query 422 ELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDR 481 ELATGYSEL+DPVVQRERFA QARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDR Sbjct 420 ELATGYSELNDPVVQRERFAAQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDR 479 Query 482 LLMSLTGLSIRETVLFPIVRPHSN 505 LLMSLTGLSIRETVLFPIVRPHS Sbjct 480 LLMSLTGLSIRETVLFPIVRPHST 503 >gi|41406557|ref|NP_959393.1| lysyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394906|gb|AAS02776.1| LysS [Mycobacterium avium subsp. paratuberculosis K-10] Length=499 Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/496 (88%), Positives = 471/496 (95%), Gaps = 4/496 (0%) Query 9 DLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGRV 68 D+PEQ+RIRRDKRARLLA+G DPYPVAV RTHTLA+VRAAHPDLP+DTAT+D+VGVAGRV Sbjct 8 DIPEQYRIRRDKRARLLAEGHDPYPVAVERTHTLAQVRAAHPDLPVDTATDDVVGVAGRV 67 Query 69 IFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRR 128 IFARNSGKLCFATLQ+GDGT LQVM+SLDKVG+ ALDAWKADVDLGDIV VHG VISSRR Sbjct 68 IFARNSGKLCFATLQEGDGTTLQVMVSLDKVGREALDAWKADVDLGDIVSVHGTVISSRR 127 Query 129 GELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAI 188 GELSVLAD WR+A+KSLRPLPVAHKEMSEE+RVRQRYVDLIVRP+AR VAR RIAV+RAI Sbjct 128 GELSVLADSWRMASKSLRPLPVAHKEMSEEARVRQRYVDLIVRPQARTVARQRIAVIRAI 187 Query 189 RTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVGGFDK 248 R AL+RRGFLEVETP+LQTLAGGAAARPF THSNALDIDLYLRIAPELFLKRC+VGGFDK Sbjct 188 RNALERRGFLEVETPMLQTLAGGAAARPFVTHSNALDIDLYLRIAPELFLKRCVVGGFDK 247 Query 249 VFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLP 308 VFELNRVFRNEGADSTHSPEFSMLETYQ YGTYDDSAVVTRELIQEVADEAIGTRQLPLP Sbjct 248 VFELNRVFRNEGADSTHSPEFSMLETYQAYGTYDDSAVVTRELIQEVADEAIGTRQLPLP 307 Query 309 DGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGH 368 DGSVYDIDGEWA+I+MYPSLS ALGEEITPQTTV++L GIA+ LG+E I +RG+GH Sbjct 308 DGSVYDIDGEWASIEMYPSLSAALGEEITPQTTVEKLLGIAERLGVE----IPRDRGYGH 363 Query 369 GKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYS 428 GK++EELWE TVG +L+APTFV+DFPV+TTPLTRQHRSI GVTEKWDLY+RG+ELATGYS Sbjct 364 GKIVEELWEHTVGDTLTAPTFVRDFPVETTPLTRQHRSIDGVTEKWDLYVRGVELATGYS 423 Query 429 ELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTG 488 EL+DPVVQRERFA QARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLM+LTG Sbjct 424 ELTDPVVQRERFAAQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMTLTG 483 Query 489 LSIRETVLFPIVRPHS 504 LSIRETVLFPIVRPHS Sbjct 484 LSIRETVLFPIVRPHS 499 >gi|118465579|ref|YP_879834.1| lysyl-tRNA synthetase [Mycobacterium avium 104] gi|254773510|ref|ZP_05215026.1| lysyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291] gi|118166866|gb|ABK67763.1| lysyl-tRNA synthetase [Mycobacterium avium 104] Length=499 Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/496 (88%), Positives = 471/496 (95%), Gaps = 4/496 (0%) Query 9 DLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGRV 68 D+PEQ+RIRRDKRARLLA+G DPYPVAV RTHTLA+VRAAHPDLP+DTAT+D+VGVAGRV Sbjct 8 DIPEQYRIRRDKRARLLAEGHDPYPVAVERTHTLAQVRAAHPDLPVDTATDDVVGVAGRV 67 Query 69 IFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRR 128 IFARNSGKLCFATLQ+GDGT LQVM+SLDKVG+ ALDAWKADVDLGDIV VHG +ISSRR Sbjct 68 IFARNSGKLCFATLQEGDGTTLQVMVSLDKVGREALDAWKADVDLGDIVSVHGTLISSRR 127 Query 129 GELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAI 188 GELSVLAD WR+A+KSLRPLPVAHKEMSEE+RVRQRYVDLIVRP+AR VAR RIAV+RAI Sbjct 128 GELSVLADSWRMASKSLRPLPVAHKEMSEEARVRQRYVDLIVRPQARTVARQRIAVIRAI 187 Query 189 RTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVGGFDK 248 R AL+RRGFLEVETP+LQTLAGGAAARPF THSNALDIDLYLRIAPELFLKRC+VGGFDK Sbjct 188 RNALERRGFLEVETPMLQTLAGGAAARPFVTHSNALDIDLYLRIAPELFLKRCVVGGFDK 247 Query 249 VFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLP 308 VFELNRVFRNEGADSTHSPEFSMLETYQ YGTYDDSAVVTRELIQEVADEAIGTRQLPLP Sbjct 248 VFELNRVFRNEGADSTHSPEFSMLETYQAYGTYDDSAVVTRELIQEVADEAIGTRQLPLP 307 Query 309 DGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGH 368 DGSVYDIDGEWA+I+MYPSLS ALGEEITPQTTV++L GIA+ LG+E I +RG+GH Sbjct 308 DGSVYDIDGEWASIEMYPSLSAALGEEITPQTTVEKLLGIAERLGVE----IPRDRGYGH 363 Query 369 GKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYS 428 GK++EELWE TVG +L+APTFV+DFPV+TTPLTRQHRSI GVTEKWDLY+RG+ELATGYS Sbjct 364 GKIVEELWEHTVGDTLTAPTFVRDFPVETTPLTRQHRSIDGVTEKWDLYVRGVELATGYS 423 Query 429 ELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTG 488 EL+DPVVQRERFA QARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLM+LTG Sbjct 424 ELTDPVVQRERFAAQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMTLTG 483 Query 489 LSIRETVLFPIVRPHS 504 LSIRETVLFPIVRPHS Sbjct 484 LSIRETVLFPIVRPHS 499 >gi|254823223|ref|ZP_05228224.1| lysyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950] Length=498 Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/496 (88%), Positives = 470/496 (95%), Gaps = 4/496 (0%) Query 9 DLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGRV 68 D+PEQ+RIRRDKRARLLA+GRDPYPVAV RTHTLA+VRAAHPDLP+DTAT+D+VGVAGRV Sbjct 7 DIPEQYRIRRDKRARLLAEGRDPYPVAVERTHTLAQVRAAHPDLPVDTATDDVVGVAGRV 66 Query 69 IFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRR 128 IFARNSGKLCFATLQ+GDGT LQVM+SLDKVG+ +LDAWKADVDLGDIVYVHG VISSRR Sbjct 67 IFARNSGKLCFATLQEGDGTTLQVMVSLDKVGRQSLDAWKADVDLGDIVYVHGNVISSRR 126 Query 129 GELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAI 188 GELSVLAD WR+A+KSLRPLPVAHKEMSEE+RVRQRYVDLIVRP+AR VAR RIAV+RAI Sbjct 127 GELSVLADSWRMASKSLRPLPVAHKEMSEEARVRQRYVDLIVRPQARTVARQRIAVIRAI 186 Query 189 RTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVGGFDK 248 R AL+RRGFLEVETP+LQTLAGGAAARPF THSNALDIDLYLRIAPELFLKRC+VGGFD+ Sbjct 187 RNALERRGFLEVETPMLQTLAGGAAARPFITHSNALDIDLYLRIAPELFLKRCVVGGFDR 246 Query 249 VFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLP 308 VFELNRVFRNEGADSTHSPEFSMLETYQ YGTYDDSAVVTRELIQEVADEAIGTRQLPLP Sbjct 247 VFELNRVFRNEGADSTHSPEFSMLETYQAYGTYDDSAVVTRELIQEVADEAIGTRQLPLP 306 Query 309 DGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGH 368 DGSVYDIDGEWA+I+MYPSLS ALGEEITP+ TV++L GIAD LG+E I +RG+GH Sbjct 307 DGSVYDIDGEWASIEMYPSLSSALGEEITPEATVEKLLGIADRLGVE----IPRDRGYGH 362 Query 369 GKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYS 428 GK++EELWE TVG +L APTFV+DFPV+TTPLTRQHRSI GVTEKWDLY+RG+ELATGYS Sbjct 363 GKIVEELWEHTVGNALVAPTFVRDFPVETTPLTRQHRSIAGVTEKWDLYVRGVELATGYS 422 Query 429 ELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTG 488 EL+DPVVQRERFA QARAAAAGDDEAMVLDEDFLAALEY MPPCTGTGMGIDRLLM+LTG Sbjct 423 ELNDPVVQRERFAAQARAAAAGDDEAMVLDEDFLAALEYAMPPCTGTGMGIDRLLMTLTG 482 Query 489 LSIRETVLFPIVRPHS 504 LSIRETVLFPIVRPHS Sbjct 483 LSIRETVLFPIVRPHS 498 >gi|342862444|ref|ZP_08719084.1| lysyl-tRNA synthetase [Mycobacterium colombiense CECT 3035] gi|342130115|gb|EGT83449.1| lysyl-tRNA synthetase [Mycobacterium colombiense CECT 3035] Length=498 Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/496 (88%), Positives = 469/496 (95%), Gaps = 4/496 (0%) Query 9 DLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGRV 68 D+PEQ+RIRRDKRARLLA+G DPYPVAV RTHTLA+VRAAHPDLP+DTAT+D+VGVAGRV Sbjct 7 DIPEQYRIRRDKRARLLAEGHDPYPVAVERTHTLAQVRAAHPDLPVDTATDDLVGVAGRV 66 Query 69 IFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRR 128 IFARNSGKLCFATLQ+GDGT LQVMISLDKVGQ +LDAWKADVDLGDIVYVHG VISSRR Sbjct 67 IFARNSGKLCFATLQEGDGTSLQVMISLDKVGQQSLDAWKADVDLGDIVYVHGTVISSRR 126 Query 129 GELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAI 188 GELSVLAD W++A+KSLRPLPVAHK+MSEE+RVRQRYVDLIVRP+AR VAR RIAVVRAI Sbjct 127 GELSVLADSWQMASKSLRPLPVAHKDMSEEARVRQRYVDLIVRPQARTVARQRIAVVRAI 186 Query 189 RTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVGGFDK 248 R AL+RRGFLEVETP+LQTLAGGAAARPF THSNALDIDLYLRIAPELFLKRC+VGGFD+ Sbjct 187 RNALERRGFLEVETPMLQTLAGGAAARPFITHSNALDIDLYLRIAPELFLKRCVVGGFDR 246 Query 249 VFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLP 308 VFELNRVFRNEGADSTHSPEF+MLETYQ YGTYDDSAVVTRELIQEVADEAIGTRQLPLP Sbjct 247 VFELNRVFRNEGADSTHSPEFAMLETYQAYGTYDDSAVVTRELIQEVADEAIGTRQLPLP 306 Query 309 DGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGH 368 DGSVYDIDGEWA+IQMYPSLS ALGEEITP+ +V+RL IAD LG+E I +RG+GH Sbjct 307 DGSVYDIDGEWASIQMYPSLSSALGEEITPEASVERLLAIADRLGVE----IPADRGYGH 362 Query 369 GKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYS 428 GK+IEELWE TVG +L+APTFV+DFPV+TTPLTRQHRSI GVTEKWDLY+RG+ELATGYS Sbjct 363 GKIIEELWEHTVGNTLTAPTFVRDFPVETTPLTRQHRSITGVTEKWDLYVRGVELATGYS 422 Query 429 ELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTG 488 EL+DPVVQRERFA QARAAAAGDDEAMVLDEDFLAALEY MPPCTGTGMGIDRLLM+LTG Sbjct 423 ELNDPVVQRERFAAQARAAAAGDDEAMVLDEDFLAALEYAMPPCTGTGMGIDRLLMTLTG 482 Query 489 LSIRETVLFPIVRPHS 504 LSIRETVLFPIVRPHS Sbjct 483 LSIRETVLFPIVRPHS 498 >gi|240172842|ref|ZP_04751501.1| lysyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478] Length=499 Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/502 (88%), Positives = 469/502 (94%), Gaps = 5/502 (0%) Query 5 DTAE-DLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVG 63 D+AE ++PEQFRIRRDKRARLLA+G DPYPVA+ RTHTLAEVRAAHPDLP+DT T+DIVG Sbjct 2 DSAETEIPEQFRIRRDKRARLLAEGHDPYPVAIERTHTLAEVRAAHPDLPVDTTTDDIVG 61 Query 64 VAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAV 123 VAGRV+FARN+GKLCFATLQDGDGT+LQVMIS DKVG+ ALDAWKADVDLGDIVYVHG V Sbjct 62 VAGRVVFARNTGKLCFATLQDGDGTRLQVMISFDKVGREALDAWKADVDLGDIVYVHGTV 121 Query 124 ISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIA 183 ISSRRGELSVLAD WR+AAKSLRPLPVAHKEMSEE+RVRQRYVDLIVRP+AR VAR RIA Sbjct 122 ISSRRGELSVLADSWRMAAKSLRPLPVAHKEMSEEARVRQRYVDLIVRPQARGVARQRIA 181 Query 184 VVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIV 243 V+RAIR AL+RRGF+EVETP+LQTLAGGAAARPF THSNALD+DLYLRIAPELFLKRCIV Sbjct 182 VIRAIRNALERRGFVEVETPMLQTLAGGAAARPFVTHSNALDMDLYLRIAPELFLKRCIV 241 Query 244 GGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTR 303 GGFD+VFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTR Sbjct 242 GGFDRVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTR 301 Query 304 QLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDN 363 QLP+PDGSVYDIDGEWATI MY SLS ALGEEITPQT+VDRLR IA L D I D Sbjct 302 QLPMPDGSVYDIDGEWATIHMYSSLSAALGEEITPQTSVDRLREIARRL----DEEILDK 357 Query 364 RGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIEL 423 G+ HGKL+EELWE TVG +L+APTFVKDFPV+TTPLTRQHRSI GVTEKWDLYL G+EL Sbjct 358 GGYRHGKLVEELWEHTVGNTLTAPTFVKDFPVETTPLTRQHRSIAGVTEKWDLYLHGVEL 417 Query 424 ATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLL 483 ATGYSEL+DPVVQR+R ADQARAAAAGDDEAM+LDEDFLAALEYGMPPCTGTGMGIDRLL Sbjct 418 ATGYSELNDPVVQRDRLADQARAAAAGDDEAMLLDEDFLAALEYGMPPCTGTGMGIDRLL 477 Query 484 MSLTGLSIRETVLFPIVRPHSN 505 M+LTGLSIRETVLFPIVRPHSN Sbjct 478 MALTGLSIRETVLFPIVRPHSN 499 >gi|15827030|ref|NP_301293.1| lysyl-tRNA synthetase [Mycobacterium leprae TN] gi|221229508|ref|YP_002502924.1| lysyl-tRNA synthetase [Mycobacterium leprae Br4923] gi|13432212|sp|P46861.2|SYK_MYCLE RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|13092577|emb|CAC29741.1| putative lysyl-tRNA synthase [Mycobacterium leprae] gi|219932615|emb|CAR70326.1| putative lysyl-tRNA synthase [Mycobacterium leprae Br4923] Length=507 Score = 862 bits (2226), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/501 (86%), Positives = 456/501 (92%), Gaps = 0/501 (0%) Query 5 DTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGV 64 +T LPEQFRIRRDKRARLLA+GRDPYPVA+ RTHTLAEVRAA+PDL D+AT+DIVG+ Sbjct 7 ETDAALPEQFRIRRDKRARLLAEGRDPYPVAIERTHTLAEVRAAYPDLATDSATDDIVGI 66 Query 65 AGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVI 124 AGRVIFARNSGKLCFATLQDGDGT LQVMISL+KVG LDAWK DVDLGDIVYVHG VI Sbjct 67 AGRVIFARNSGKLCFATLQDGDGTNLQVMISLNKVGSETLDAWKVDVDLGDIVYVHGNVI 126 Query 125 SSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAV 184 SSR GELSVLAD W++ +KSLRPLPVAHKEMSEESRVRQRYVDLIV P+ R VA RIAV Sbjct 127 SSRSGELSVLADSWQMVSKSLRPLPVAHKEMSEESRVRQRYVDLIVCPQVRIVAHQRIAV 186 Query 185 VRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVG 244 +RAIRTAL+RRGFLEVETP+LQTLAGGAAARPF THSNALDIDLYLRIAPELFLKRCIVG Sbjct 187 IRAIRTALERRGFLEVETPMLQTLAGGAAARPFVTHSNALDIDLYLRIAPELFLKRCIVG 246 Query 245 GFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQ 304 GFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRE+IQEVADEAIGTRQ Sbjct 247 GFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTREIIQEVADEAIGTRQ 306 Query 305 LPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNR 364 L +PD SVYDIDGEW TIQMYPSLS LGEEITPQT+VDRLR IAD LG P I D Sbjct 307 LQMPDDSVYDIDGEWETIQMYPSLSAVLGEEITPQTSVDRLRAIADRLGRGIGPEILDKP 366 Query 365 GFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELA 424 +GHG+L+E+LWE TVG +LSAPTFVKDFPV+TTPLTRQHRSIPGVTEKWDLYLRG+ELA Sbjct 367 SYGHGRLVEQLWEYTVGNTLSAPTFVKDFPVETTPLTRQHRSIPGVTEKWDLYLRGVELA 426 Query 425 TGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLM 484 TGYSEL+DPVVQRERF Q RAAAA +DEAM LDE+FLAALEY MPPCTGTGMGIDRLLM Sbjct 427 TGYSELNDPVVQRERFGQQVRAAAAEEDEAMALDEEFLAALEYAMPPCTGTGMGIDRLLM 486 Query 485 SLTGLSIRETVLFPIVRPHSN 505 SLTGLSIRETVLFPIVRPHSN Sbjct 487 SLTGLSIRETVLFPIVRPHSN 507 >gi|183985070|ref|YP_001853361.1| lysyl-tRNA synthetase 1 LysS [Mycobacterium marinum M] gi|183178396|gb|ACC43506.1| lysyl-tRNA synthetase 1 LysS [Mycobacterium marinum M] Length=498 Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/497 (86%), Positives = 461/497 (93%), Gaps = 5/497 (1%) Query 9 DLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGRV 68 D+PEQFRIRRDKRARLLA+G DPYPVA+ RTHTLAE+RA + DLP D+ATEDIVGVAGRV Sbjct 7 DIPEQFRIRRDKRARLLAEGYDPYPVAIERTHTLAEIRATYADLPTDSATEDIVGVAGRV 66 Query 69 IFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRR 128 +FARN+GKLCFATLQDGDGTQLQ MISLDKVG+ +LD WKADVD+GD+VYVHG VISSRR Sbjct 67 VFARNTGKLCFATLQDGDGTQLQAMISLDKVGRESLDRWKADVDIGDVVYVHGTVISSRR 126 Query 129 GELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAI 188 GELSVLAD WR+AAK+LRPLPVAHKEMSEESRVRQRYVDLIVRP+AR VAR RIAV+RA+ Sbjct 127 GELSVLADSWRMAAKALRPLPVAHKEMSEESRVRQRYVDLIVRPQAREVARQRIAVIRAV 186 Query 189 RTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVGGFDK 248 R AL+RRGFLEVETP+LQTLAGGAAARPF THSNALDIDLYLRIAPELFLKRCIVGGFD+ Sbjct 187 RNALERRGFLEVETPMLQTLAGGAAARPFVTHSNALDIDLYLRIAPELFLKRCIVGGFDR 246 Query 249 VFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLP 308 VFELNRVFRNEG+DSTHSPEFSMLETYQTYGTYDDSA++TRELIQEVADEAIGTRQLP+P Sbjct 247 VFELNRVFRNEGSDSTHSPEFSMLETYQTYGTYDDSALITRELIQEVADEAIGTRQLPMP 306 Query 309 DGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGH 368 DGSVYDIDGEWATI+MY SLS ALGE+ITP+TTV RLR IA L +E DN FGH Sbjct 307 DGSVYDIDGEWATIEMYSSLSEALGEQITPETTVARLRDIASGLDVEI-----DNSVFGH 361 Query 369 GKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYS 428 GKL+EELWE VG L+APTFVKDFPV+TTPLTRQHRSIPGVTEKWDLY+RG+ELATGYS Sbjct 362 GKLVEELWEHAVGNKLTAPTFVKDFPVETTPLTRQHRSIPGVTEKWDLYVRGVELATGYS 421 Query 429 ELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTG 488 EL+DPVVQR+RFADQARAAAAGDDEAM LDEDFL ALEYGMPPCTGTGMGIDRLLM LTG Sbjct 422 ELNDPVVQRDRFADQARAAAAGDDEAMQLDEDFLTALEYGMPPCTGTGMGIDRLLMCLTG 481 Query 489 LSIRETVLFPIVRPHSN 505 LSIRETVLFPIVRPHSN Sbjct 482 LSIRETVLFPIVRPHSN 498 >gi|333992528|ref|YP_004525142.1| lysyl-tRNA synthetase [Mycobacterium sp. JDM601] gi|333488496|gb|AEF37888.1| lysyl-tRNA synthetase 1 LysS [Mycobacterium sp. JDM601] Length=511 Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/497 (83%), Positives = 453/497 (92%), Gaps = 4/497 (0%) Query 9 DLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGRV 68 DLPEQFR+RRDKRARLLAQGRDPYPVAV RTHTLA++RAA+PDL DT T D+VGVAGRV Sbjct 19 DLPEQFRVRRDKRARLLAQGRDPYPVAVDRTHTLAQIRAAYPDLAADTETGDVVGVAGRV 78 Query 69 IFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRR 128 +FARNSGKLCFATLQ+GDGTQLQVMISL VG+ L++WKADVDLGDIV+VHG VISSRR Sbjct 79 VFARNSGKLCFATLQEGDGTQLQVMISLASVGEQPLESWKADVDLGDIVHVHGEVISSRR 138 Query 129 GELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAI 188 GELSVLAD W++A+KSLRPLPVAHKEMSEESRVRQRYVDLIVRPEAR VAR RI V+RAI Sbjct 139 GELSVLADSWQMASKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARIVARQRILVIRAI 198 Query 189 RTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVGGFDK 248 R+AL+RRGFLEVETP+LQTLAGGAAARPF THSNALD+DLYLRIAPELFLKRC+VGGF++ Sbjct 199 RSALERRGFLEVETPMLQTLAGGAAARPFVTHSNALDVDLYLRIAPELFLKRCVVGGFER 258 Query 249 VFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLP 308 VFELNRVFRNEGADSTHSPEFSMLETYQ YGTYDDSAV TRE+IQEVADE IGTR+LPLP Sbjct 259 VFELNRVFRNEGADSTHSPEFSMLETYQAYGTYDDSAVATREIIQEVADEVIGTRRLPLP 318 Query 309 DGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGH 368 DGS YDIDGEWAT++MYPSLS A+GEEITP T+ DRL +AD LG+E I +RG+GH Sbjct 319 DGSTYDIDGEWATVEMYPSLSHAIGEEITPATSADRLWAVADRLGVE----IPTDRGYGH 374 Query 369 GKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYS 428 GKL+EELWE VG +LSAPTFV+DFPV+TTPLTRQHRSI GVTEKWDLY+RG+ELATGYS Sbjct 375 GKLVEELWEHAVGNALSAPTFVRDFPVETTPLTRQHRSIDGVTEKWDLYMRGVELATGYS 434 Query 429 ELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTG 488 EL DPVVQR RF DQARAAAAGDDEAM LDEDFL A+E+ MPPCTGTGMGIDRLLM LTG Sbjct 435 ELIDPVVQRARFEDQARAAAAGDDEAMALDEDFLVAMEHAMPPCTGTGMGIDRLLMVLTG 494 Query 489 LSIRETVLFPIVRPHSN 505 LSIR+TVLFPIVR H N Sbjct 495 LSIRDTVLFPIVRRHGN 511 >gi|118619355|ref|YP_907687.1| lysyl-tRNA synthetase [Mycobacterium ulcerans Agy99] gi|118571465|gb|ABL06216.1| lysyl-tRNA synthetase 1 LysS [Mycobacterium ulcerans Agy99] Length=498 Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/497 (85%), Positives = 460/497 (93%), Gaps = 5/497 (1%) Query 9 DLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGRV 68 ++PEQFRIRRDKRARLLA+G DPYPVA+ RTHTLAE+RA + DLP D+ATEDIVGVAGRV Sbjct 7 NIPEQFRIRRDKRARLLAEGYDPYPVAIERTHTLAEIRATYADLPTDSATEDIVGVAGRV 66 Query 69 IFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRR 128 +FARN+GKLCFATLQDGDGTQLQ MISLD+VG+ +LD WKADVD+GD+VYVHG VISSRR Sbjct 67 VFARNTGKLCFATLQDGDGTQLQAMISLDEVGRESLDRWKADVDIGDVVYVHGTVISSRR 126 Query 129 GELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAI 188 GELSVLAD WR+AAK+LRPLPVAHKEMSEESRVRQRYVDLIVRP+AR VAR RIAV+RA+ Sbjct 127 GELSVLADSWRMAAKALRPLPVAHKEMSEESRVRQRYVDLIVRPQAREVARQRIAVIRAV 186 Query 189 RTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVGGFDK 248 R AL+RRGFLEVETP+LQTLAGGAAARPF THSNALDIDLYLRIAPELFLKRCIVGGFD+ Sbjct 187 RNALERRGFLEVETPMLQTLAGGAAARPFVTHSNALDIDLYLRIAPELFLKRCIVGGFDR 246 Query 249 VFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLP 308 VFELNRVFRNEG+DSTHSPEFSMLETYQTYGTYDDSA++TRELIQEVADEAIGTRQL +P Sbjct 247 VFELNRVFRNEGSDSTHSPEFSMLETYQTYGTYDDSALITRELIQEVADEAIGTRQLSMP 306 Query 309 DGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGH 368 DGSVYDIDGEWAT++MY SLS ALGE+ITP+TTV RLR IA L +E DN FGH Sbjct 307 DGSVYDIDGEWATMEMYSSLSEALGEQITPETTVARLRDIASGLDVEI-----DNSVFGH 361 Query 369 GKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYS 428 GKL+EELWE VG L+APTFVKDFPV+TTPLTRQHRSIPGVTEKWDLY+RG+ELATGYS Sbjct 362 GKLVEELWEHAVGNKLTAPTFVKDFPVETTPLTRQHRSIPGVTEKWDLYVRGVELATGYS 421 Query 429 ELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTG 488 EL+DPVVQR+RFADQARAAAAGDDEAM LDEDFL ALEYGMPPCTGTGMGIDRLLM LTG Sbjct 422 ELNDPVVQRDRFADQARAAAAGDDEAMQLDEDFLTALEYGMPPCTGTGMGIDRLLMCLTG 481 Query 489 LSIRETVLFPIVRPHSN 505 LSIRETVLFPIVRPHSN Sbjct 482 LSIRETVLFPIVRPHSN 498 >gi|120406308|ref|YP_956137.1| lysyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1] gi|119959126|gb|ABM16131.1| lysyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1] Length=509 Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/505 (83%), Positives = 454/505 (90%), Gaps = 4/505 (0%) Query 1 VSAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED 60 V++ D+ +D+PEQFRIR+ KR RLLA+GRDPYPV V RTHTLAE+RAA+PDLP DT T Sbjct 9 VTSPDSPDDIPEQFRIRQGKRDRLLAEGRDPYPVKVDRTHTLAELRAAYPDLPADTKTGQ 68 Query 61 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH 120 VGVAGRVIFARNSGKLCFATLQ+GDGT LQ MISLD+VGQ +LDAWKADVDLGDIV+VH Sbjct 69 EVGVAGRVIFARNSGKLCFATLQEGDGTHLQAMISLDQVGQDSLDAWKADVDLGDIVFVH 128 Query 121 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL 180 G VISSRRGELSVLAD W+IA+K+LRPLPVAHKEMSEESRVRQRYVDLIVRPEARA+AR Sbjct 129 GEVISSRRGELSVLADSWQIASKALRPLPVAHKEMSEESRVRQRYVDLIVRPEARAIARQ 188 Query 181 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR 240 R+AVVRA+R AL+RRGFLEVETP+LQTLAGGAAARPF THSNALD DLYLRIAPELFLKR Sbjct 189 RVAVVRAVRNALERRGFLEVETPMLQTLAGGAAARPFVTHSNALDADLYLRIAPELFLKR 248 Query 241 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI 300 C+VGGFD+VFELNR FRNEGADSTHSPEF+MLETYQ YGTYDDSA+VTR+LIQEVADEAI Sbjct 249 CVVGGFDRVFELNRNFRNEGADSTHSPEFAMLETYQAYGTYDDSALVTRQLIQEVADEAI 308 Query 301 GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAI 360 GTRQ+PL DGSVYD+DGEW IQMYPSLS ALGEEITPQT V RL IAD LG+E I Sbjct 309 GTRQVPLADGSVYDLDGEWDDIQMYPSLSEALGEEITPQTAVPRLWRIADGLGVE----I 364 Query 361 HDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRG 420 +RG+GHGKL+EELWE TVG L APTFV+DFPV+TTPLTR HRSI GVTEKWDLY+R Sbjct 365 PRDRGYGHGKLVEELWEFTVGDKLWAPTFVRDFPVETTPLTRPHRSIEGVTEKWDLYIRN 424 Query 421 IELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGID 480 ELATGYSEL DP++QRERF +QARAAAAGDDEAM LDEDFLAALEYGMPP TGTGMGID Sbjct 425 FELATGYSELVDPIIQRERFEEQARAAAAGDDEAMALDEDFLAALEYGMPPTTGTGMGID 484 Query 481 RLLMSLTGLSIRETVLFPIVRPHSN 505 RLLM+LTGLSIRETVLFPIVR H N Sbjct 485 RLLMALTGLSIRETVLFPIVRRHGN 509 >gi|108801721|ref|YP_641918.1| lysyl-tRNA synthetase [Mycobacterium sp. MCS] gi|119870872|ref|YP_940824.1| lysyl-tRNA synthetase [Mycobacterium sp. KMS] gi|108772140|gb|ABG10862.1| lysyl-tRNA synthetase [Mycobacterium sp. MCS] gi|119696961|gb|ABL94034.1| lysyl-tRNA synthetase [Mycobacterium sp. KMS] Length=512 Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/502 (81%), Positives = 450/502 (90%), Gaps = 4/502 (0%) Query 2 SAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDI 61 +A D D+PEQFRIR+ KR RLLA+GRDPYPV V RTHTLAEVRAA PDLP+D+ T +I Sbjct 13 NAPDNDPDIPEQFRIRQAKRERLLAEGRDPYPVDVDRTHTLAEVRAAFPDLPVDSQTGEI 72 Query 62 VGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHG 121 VGVAGRV+FARNSGKLCFATLQ+GDGTQLQ MISL +VGQ +LD+WKADVDLGDIV VHG Sbjct 73 VGVAGRVVFARNSGKLCFATLQEGDGTQLQAMISLAEVGQESLDSWKADVDLGDIVSVHG 132 Query 122 AVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLR 181 VISSRRGELSVLAD W+I +K+LRPLPVAHKEMSEE+RVRQRYVDLIVRPEAR +AR R Sbjct 133 QVISSRRGELSVLADSWQIISKALRPLPVAHKEMSEEARVRQRYVDLIVRPEARTIARQR 192 Query 182 IAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRC 241 +AVVRA+R AL+RRGFLE+ETP+LQTLAGGAAARPF THSNALD+DLYLRIAPELFLKR Sbjct 193 VAVVRALRNALERRGFLELETPMLQTLAGGAAARPFVTHSNALDVDLYLRIAPELFLKRA 252 Query 242 IVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIG 301 +VGGF+KVFELNR FRNEG DSTHSPEF+MLETYQ YG Y+DSAVVTRELIQEVADEAIG Sbjct 253 LVGGFEKVFELNRNFRNEGIDSTHSPEFAMLETYQAYGDYNDSAVVTRELIQEVADEAIG 312 Query 302 TRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIH 361 TRQ+PL DG+VYD+DGEW +++MYPSLS ALGEEITPQT D L IAD LG+E I Sbjct 313 TRQVPLADGTVYDLDGEWESLEMYPSLSAALGEEITPQTPADELWRIADRLGVE----IP 368 Query 362 DNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGI 421 +RG+GHGKLIEELWE TVG+ L APTFV+DFPV+TTPLTR HRS+PGVTEKWDLY+R Sbjct 369 RDRGYGHGKLIEELWEHTVGEDLWAPTFVRDFPVETTPLTRSHRSVPGVTEKWDLYVRKF 428 Query 422 ELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDR 481 ELATGYSEL DP++QRERF +QARAAAAGDDEAMVLDEDFLAALEYGMPP TGTGMGIDR Sbjct 429 ELATGYSELIDPIIQRERFEEQARAAAAGDDEAMVLDEDFLAALEYGMPPSTGTGMGIDR 488 Query 482 LLMSLTGLSIRETVLFPIVRPH 503 LLM+LTGLSIRET+LFPIVR H Sbjct 489 LLMALTGLSIRETILFPIVRRH 510 >gi|126437708|ref|YP_001073399.1| lysyl-tRNA synthetase [Mycobacterium sp. JLS] gi|126237508|gb|ABO00909.1| lysyl-tRNA synthetase [Mycobacterium sp. JLS] Length=512 Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/502 (81%), Positives = 450/502 (90%), Gaps = 4/502 (0%) Query 2 SAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDI 61 +A D D+PEQFRIR+ KR RLLA+GRDPYPV V RTHTLAEVRAA PDLP+D+ T +I Sbjct 13 NAPDNDPDIPEQFRIRQAKRERLLAEGRDPYPVDVDRTHTLAEVRAAFPDLPVDSQTGEI 72 Query 62 VGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHG 121 VGVAGRV+FARNSGKLCFATLQ+GDGTQLQ MISL +VGQ +LD+WKADVDLGDIV VHG Sbjct 73 VGVAGRVVFARNSGKLCFATLQEGDGTQLQAMISLAEVGQESLDSWKADVDLGDIVSVHG 132 Query 122 AVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLR 181 VISSRRGELSVLAD W+I +K+LRPLPVAHKEMSEE+RVRQRYVDLIVRPEAR +AR R Sbjct 133 QVISSRRGELSVLADSWQIISKALRPLPVAHKEMSEEARVRQRYVDLIVRPEARTIARQR 192 Query 182 IAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRC 241 +AVVRA+R AL+RRGFLE+ETP+LQTLAGGAAARPF THSNALD+DLYLRIAPELFLKR Sbjct 193 VAVVRALRNALERRGFLELETPMLQTLAGGAAARPFVTHSNALDVDLYLRIAPELFLKRA 252 Query 242 IVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIG 301 +VGGF+KVFELNR FRNEG DSTHSPEF+MLETYQ YG Y+DSAVVTRELIQEVADEAIG Sbjct 253 LVGGFEKVFELNRNFRNEGIDSTHSPEFAMLETYQAYGDYNDSAVVTRELIQEVADEAIG 312 Query 302 TRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIH 361 TRQ+PL DG+VYD+DGEW +++MYPSLS ALGEEITPQT D L IAD LG+E I Sbjct 313 TRQVPLADGTVYDLDGEWESLEMYPSLSAALGEEITPQTPADELWRIADRLGVE----IP 368 Query 362 DNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGI 421 +RG+GHGKLIEELWE TVG+ L APTFV+DFPV+TTPLTR HRS+PGVTEKWDLY+R Sbjct 369 RDRGYGHGKLIEELWEHTVGEDLWAPTFVRDFPVETTPLTRSHRSVPGVTEKWDLYVRKF 428 Query 422 ELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDR 481 ELATGYSEL DP++QRERF +QARAAAAGDDEAMVLD+DFLAALEYGMPP TGTGMGIDR Sbjct 429 ELATGYSELIDPIIQRERFEEQARAAAAGDDEAMVLDDDFLAALEYGMPPSTGTGMGIDR 488 Query 482 LLMSLTGLSIRETVLFPIVRPH 503 LLM+LTGLSIRET+LFPIVR H Sbjct 489 LLMALTGLSIRETILFPIVRRH 510 >gi|118471596|ref|YP_890315.1| lysyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] gi|118172883|gb|ABK73779.1| lysyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] Length=507 Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/497 (82%), Positives = 450/497 (91%), Gaps = 4/497 (0%) Query 9 DLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGRV 68 D+PEQFRIR++KR RLLAQG DPYPV V RTHTLAE+R AHPDL DTAT IVGV+GRV Sbjct 15 DIPEQFRIRQEKRERLLAQGHDPYPVKVDRTHTLAELRRAHPDLAADTATGQIVGVSGRV 74 Query 69 IFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRR 128 +FARNSGKLCFATLQ+GDGTQLQVMISL +VGQ ALD+WK+DVDLGDIV+VHG VISS+R Sbjct 75 VFARNSGKLCFATLQEGDGTQLQVMISLAQVGQEALDSWKSDVDLGDIVFVHGEVISSKR 134 Query 129 GELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAI 188 GELSVLAD W++AAK+LRPLPVAHKEMSEE+RVRQRYVDLIVRPEAR +AR R+AVVRA+ Sbjct 135 GELSVLADRWQMAAKALRPLPVAHKEMSEEARVRQRYVDLIVRPEARTIARQRVAVVRAV 194 Query 189 RTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVGGFDK 248 R+AL+RRGFLEVETP+LQTLAGGAAARPF THSNALDIDLYLRIAPELFLKRC+VGGF+K Sbjct 195 RSALERRGFLEVETPMLQTLAGGAAARPFITHSNALDIDLYLRIAPELFLKRCLVGGFEK 254 Query 249 VFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLP 308 VFELNR FRNEG DSTHSPEF+MLETYQ YG Y+DSA VTRELIQEVADEAIGTRQ+PLP Sbjct 255 VFELNRNFRNEGVDSTHSPEFAMLETYQAYGDYNDSATVTRELIQEVADEAIGTRQVPLP 314 Query 309 DGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGH 368 DG+VYD+DGEW T++MYPSLS ALG+EITP+T V++L IAD L +E I +RG+GH Sbjct 315 DGTVYDLDGEWDTVEMYPSLSEALGDEITPETPVEKLWQIADRLEVE----IPRDRGYGH 370 Query 369 GKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYS 428 GKLIEELWE TVG L APTFV+DFPV+TTPLTR HRSIPGVTEKWDLY+R ELATGYS Sbjct 371 GKLIEELWEHTVGDKLWAPTFVRDFPVETTPLTRAHRSIPGVTEKWDLYVRKFELATGYS 430 Query 429 ELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTG 488 EL DPV+QRERF QARAAAAGDDEAMVLDEDFLAALE+ MPP TGTGMGIDRL+M+LTG Sbjct 431 ELIDPVIQRERFEAQARAAAAGDDEAMVLDEDFLAALEFAMPPTTGTGMGIDRLMMALTG 490 Query 489 LSIRETVLFPIVRPHSN 505 LSIRETVLFPIVR HSN Sbjct 491 LSIRETVLFPIVRRHSN 507 >gi|145222020|ref|YP_001132698.1| lysyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK] gi|315446240|ref|YP_004079119.1| lysyl-tRNA synthetase (class II) [Mycobacterium sp. Spyr1] gi|254782477|sp|A4T5M9.1|SYK_MYCGI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|145214506|gb|ABP43910.1| lysyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK] gi|315264543|gb|ADU01285.1| lysyl-tRNA synthetase (class II) [Mycobacterium sp. Spyr1] Length=501 Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/505 (80%), Positives = 449/505 (89%), Gaps = 4/505 (0%) Query 1 VSAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATED 60 +++ D+ +D+PEQFRIR+ KR RLLA+GR+PYPV V RTHTLAE+R A+PDL DT T Sbjct 1 MTSPDSPDDIPEQFRIRQAKRERLLAEGREPYPVKVDRTHTLAELRQAYPDLEPDTKTGL 60 Query 61 IVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVH 120 VGVAGRVIFARNSGKLCFATLQ+GDG QLQVMIS +VGQ +LDAWKADVDLGDIV+VH Sbjct 61 KVGVAGRVIFARNSGKLCFATLQEGDGAQLQVMISFAEVGQESLDAWKADVDLGDIVFVH 120 Query 121 GAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARL 180 G VISSRRGELSVLAD W+I +K+LRPLPVAHKE++EE+RVRQRYVDLIVRPEAR +AR Sbjct 121 GEVISSRRGELSVLADSWQIVSKALRPLPVAHKELNEETRVRQRYVDLIVRPEARTIARQ 180 Query 181 RIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKR 240 RIAVVRA+R+AL+RRGFLEVETP+LQTLAGGAAARPF THSNALD DLYLRIAPELFLKR Sbjct 181 RIAVVRAVRSALERRGFLEVETPMLQTLAGGAAARPFVTHSNALDADLYLRIAPELFLKR 240 Query 241 CIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAI 300 C+VGGFD+VFELNR FRNEGADSTHSPEF+MLETYQ YGTYDDSA VTRELIQEVADEAI Sbjct 241 CVVGGFDRVFELNRNFRNEGADSTHSPEFAMLETYQAYGTYDDSATVTRELIQEVADEAI 300 Query 301 GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAI 360 GTRQ+PL DG+ YD+DGEW ++QMYPSLS ALGEEITP T ++L IAD LG+E I Sbjct 301 GTRQVPLADGTEYDLDGEWQSLQMYPSLSEALGEEITPATPAEKLWQIADRLGVE----I 356 Query 361 HDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRG 420 +RG+GHGKL+EELWE TVG +L APTFV+DFPV+TTPLTR HRSI GVTEKWDLY+R Sbjct 357 PRDRGYGHGKLVEELWEFTVGDTLWAPTFVRDFPVETTPLTRPHRSIEGVTEKWDLYVRK 416 Query 421 IELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGID 480 ELATGYSEL DP++QRERF QARAAAAGDDEAM LDEDFLAALEYGMPP TGTGMGID Sbjct 417 FELATGYSELIDPIIQRERFEAQARAAAAGDDEAMALDEDFLAALEYGMPPTTGTGMGID 476 Query 481 RLLMSLTGLSIRETVLFPIVRPHSN 505 RLLM+LTGLSIRETVLFPIVR HSN Sbjct 477 RLLMALTGLSIRETVLFPIVRRHSN 501 >gi|161598447|ref|YP_116617.2| lysyl-tRNA synthetase [Nocardia farcinica IFM 10152] Length=522 Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/499 (76%), Positives = 430/499 (87%), Gaps = 4/499 (0%) Query 4 ADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVG 63 A +D+PEQ RIRR+KR RLL G + YPV VPRTH+LAE+RAAHPDL DT T VG Sbjct 25 AQDVDDVPEQMRIRREKRERLLEAGTEAYPVVVPRTHSLAEIRAAHPDLAPDTQTGQQVG 84 Query 64 VAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAV 123 VAGRVIF RN+GKLCFATLQ+GDGT+LQ MISL+ VG AL AWKADVDLGD V+VHG V Sbjct 85 VAGRVIFLRNTGKLCFATLQEGDGTKLQAMISLNGVGADALAAWKADVDLGDFVFVHGEV 144 Query 124 ISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIA 183 I+SR GELSV+AD W +AAKSLRPLPVAHKEM+EESRVRQRYVDLIVRPEAR +AR R+A Sbjct 145 IASRTGELSVMADSWSMAAKSLRPLPVAHKEMNEESRVRQRYVDLIVRPEARQMARTRVA 204 Query 184 VVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIV 243 VVRA+R AL+RRGFLEVETP+LQTL GGAAARPF THSNALD+DLYLRIAPELFLKRC+V Sbjct 205 VVRALRNALERRGFLEVETPMLQTLHGGAAARPFVTHSNALDMDLYLRIAPELFLKRCVV 264 Query 244 GGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTR 303 GG +KVFE+NR FRNEGADSTHSPEF+MLETY+ YGTYDDSA + RELIQEVA EA+GT+ Sbjct 265 GGLEKVFEINRNFRNEGADSTHSPEFAMLETYEAYGTYDDSATMIRELIQEVAQEALGTQ 324 Query 304 QLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDN 363 + L DG+ YD+ GEWAT++MYPSLS ALGE +TP+TTV+ LR IA +GLE I + Sbjct 325 VVTLADGTEYDLRGEWATVEMYPSLSAALGEPVTPETTVEELRAIAARVGLE----IPEE 380 Query 364 RGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIEL 423 +G+GHGKL+EELWE G L APTFV+DFPV+T+PLTRQHRS PGVTEKWDLY+RG EL Sbjct 381 KGYGHGKLVEELWEHQYGDKLYAPTFVRDFPVETSPLTRQHRSKPGVTEKWDLYVRGFEL 440 Query 424 ATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLL 483 ATGYSEL DPV+QRERF DQAR AA GDDEAMVLDEDFLAA+E+GMPP TGTGMGIDRLL Sbjct 441 ATGYSELVDPVIQRERFVDQARLAAQGDDEAMVLDEDFLAAMEHGMPPTTGTGMGIDRLL 500 Query 484 MSLTGLSIRETVLFPIVRP 502 M+LTGL IRET+LFPIVRP Sbjct 501 MALTGLGIRETILFPIVRP 519 >gi|169627648|ref|YP_001701297.1| lysyl-tRNA synthetase (LysS) [Mycobacterium abscessus ATCC 19977] gi|169239615|emb|CAM60643.1| lysyl-trna synthetase (LysS) [Mycobacterium abscessus] Length=500 Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust. Identities = 377/498 (76%), Positives = 428/498 (86%), Gaps = 4/498 (0%) Query 5 DTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGV 64 D LPEQFRIR+ KR +LLA+G PYPV VPRTH+L ++R A+ DL DT+T D VGV Sbjct 5 DAQTSLPEQFRIRQAKREKLLAEGVQPYPVEVPRTHSLKQIRDAYTDLETDTSTGDQVGV 64 Query 65 AGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVI 124 +GRVIF+RN+GKLCFATLQ+GDGT LQVMISL VG+ +L WK DVDLGDIV+VHG VI Sbjct 65 SGRVIFSRNTGKLCFATLQEGDGTSLQVMISLAGVGEQSLADWKTDVDLGDIVFVHGEVI 124 Query 125 SSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAV 184 SSRRGELSV+AD W++A+KSLRPLPVAHKEMSEE+RVRQRYVDLIVRPEAR +AR R+AV Sbjct 125 SSRRGELSVMADRWQMASKSLRPLPVAHKEMSEETRVRQRYVDLIVRPEARQIARQRVAV 184 Query 185 VRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVG 244 +RAIR A+ RR FLE+ETP+LQTLAGGAAARPF THSNALDIDLYLRIAPELFLK+ +VG Sbjct 185 MRAIRDAMHRRDFLELETPILQTLAGGAAARPFITHSNALDIDLYLRIAPELFLKKALVG 244 Query 245 GFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQ 304 GFDK+FELNRVFRNEGADSTHSPEF MLETY+TYGTYD +A + RELIQEVAD+A+GTRQ Sbjct 245 GFDKIFELNRVFRNEGADSTHSPEFVMLETYETYGTYDTAATMIRELIQEVADDAMGTRQ 304 Query 305 LPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNR 364 + LPDGS YD+DGEW T++MYPSLS ALGEEITP T V L IAD +G E I +R Sbjct 305 VTLPDGSTYDLDGEWTTLEMYPSLSEALGEEITPDTPVAELWKIADRVGAE----IPTDR 360 Query 365 GFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELA 424 G+GHGKLIEELWE VG + APTFV+DFPV+T+PLTRQHRSI GVTEKWDLY+RG ELA Sbjct 361 GYGHGKLIEELWEHQVGDKMYAPTFVRDFPVETSPLTRQHRSIAGVTEKWDLYVRGFELA 420 Query 425 TGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLM 484 TGYSEL DPV+QRERF DQAR AAAGDDEAM LDEDFL A+E+ MPP GTGMGIDRLLM Sbjct 421 TGYSELIDPVIQRERFVDQARLAAAGDDEAMSLDEDFLGAMEHAMPPAAGTGMGIDRLLM 480 Query 485 SLTGLSIRETVLFPIVRP 502 +LTGL IRET+LFPIVRP Sbjct 481 ALTGLGIRETILFPIVRP 498 >gi|54013883|dbj|BAD55253.1| putative lysyl-tRNA synthetase [Nocardia farcinica IFM 10152] Length=488 Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/489 (77%), Positives = 423/489 (87%), Gaps = 4/489 (0%) Query 14 FRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGRVIFARN 73 RIRR+KR RLL G + YPV VPRTH+LAE+RAAHPDL DT T VGVAGRVIF RN Sbjct 1 MRIRREKRERLLEAGTEAYPVVVPRTHSLAEIRAAHPDLAPDTQTGQQVGVAGRVIFLRN 60 Query 74 SGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRRGELSV 133 +GKLCFATLQ+GDGT+LQ MISL+ VG AL AWKADVDLGD V+VHG VI+SR GELSV Sbjct 61 TGKLCFATLQEGDGTKLQAMISLNGVGADALAAWKADVDLGDFVFVHGEVIASRTGELSV 120 Query 134 LADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTALQ 193 +AD W +AAKSLRPLPVAHKEM+EESRVRQRYVDLIVRPEAR +AR R+AVVRA+R AL+ Sbjct 121 MADSWSMAAKSLRPLPVAHKEMNEESRVRQRYVDLIVRPEARQMARTRVAVVRALRNALE 180 Query 194 RRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVGGFDKVFELN 253 RRGFLEVETP+LQTL GGAAARPF THSNALD+DLYLRIAPELFLKRC+VGG +KVFE+N Sbjct 181 RRGFLEVETPMLQTLHGGAAARPFVTHSNALDMDLYLRIAPELFLKRCVVGGLEKVFEIN 240 Query 254 RVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLPDGSVY 313 R FRNEGADSTHSPEF+MLETY+ YGTYDDSA + RELIQEVA EA+GT+ + L DG+ Y Sbjct 241 RNFRNEGADSTHSPEFAMLETYEAYGTYDDSATMIRELIQEVAQEALGTQVVTLADGTEY 300 Query 314 DIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGHGKLIE 373 D+ GEWAT++MYPSLS ALGE +TP+TTV+ LR IA +GLE I + +G+GHGKL+E Sbjct 301 DLRGEWATVEMYPSLSAALGEPVTPETTVEELRAIAARVGLE----IPEEKGYGHGKLVE 356 Query 374 ELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYSELSDP 433 ELWE G L APTFV+DFPV+T+PLTRQHRS PGVTEKWDLY+RG ELATGYSEL DP Sbjct 357 ELWEHQYGDKLYAPTFVRDFPVETSPLTRQHRSKPGVTEKWDLYVRGFELATGYSELVDP 416 Query 434 VVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTGLSIRE 493 V+QRERF DQAR AA GDDEAMVLDEDFLAA+E+GMPP TGTGMGIDRLLM+LTGL IRE Sbjct 417 VIQRERFVDQARLAAQGDDEAMVLDEDFLAAMEHGMPPTTGTGMGIDRLLMALTGLGIRE 476 Query 494 TVLFPIVRP 502 T+LFPIVRP Sbjct 477 TILFPIVRP 485 >gi|325675034|ref|ZP_08154721.1| lysine--tRNA ligase [Rhodococcus equi ATCC 33707] gi|325554620|gb|EGD24295.1| lysine--tRNA ligase [Rhodococcus equi ATCC 33707] Length=506 Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/501 (73%), Positives = 430/501 (86%), Gaps = 4/501 (0%) Query 4 ADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVG 63 A +D PEQ RIRR+KR RLLAQG++PYPV+VPRTH+LAE+RA +PDL D++T + VG Sbjct 9 AQPVDDTPEQLRIRREKRERLLAQGQEPYPVSVPRTHSLAEIRAKYPDLEPDSSTGEQVG 68 Query 64 VAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAV 123 V GRVIF RN+GKLCFATLQ+GDGTQLQ M+SL VG+ AL AWK+DVDLGD V+VHG V Sbjct 69 VVGRVIFVRNTGKLCFATLQEGDGTQLQAMLSLANVGEDALAAWKSDVDLGDFVFVHGEV 128 Query 124 ISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIA 183 ISSRRGELSV+AD W++AAKSLRP+PVAHKEMSEESRVRQRY DLI+RPEAR +AR R+A Sbjct 129 ISSRRGELSVMADTWQMAAKSLRPMPVAHKEMSEESRVRQRYADLIIRPEARDMARKRVA 188 Query 184 VVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIV 243 VVR +R AL+RRGFLEVETP+LQTL GGAAARPF THSNALDIDLYLRIAPELFLKRC+V Sbjct 189 VVRELRNALERRGFLEVETPMLQTLHGGAAARPFVTHSNALDIDLYLRIAPELFLKRCVV 248 Query 244 GGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTR 303 GG +KVFE+NR FRNEG DSTHSPEF+MLETY+ YGTYDDSA + REL+QEVA A GT+ Sbjct 249 GGIEKVFEINRNFRNEGVDSTHSPEFAMLETYEAYGTYDDSAKMIRELVQEVAQAAFGTQ 308 Query 304 QLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDN 363 + L DG+ YD+ GEW T++MYPSLS A+G ++TP TTV+ L +A+ +GLE + + Sbjct 309 VVTLADGTEYDLSGEWKTMEMYPSLSAAIGVDVTPDTTVEELLALAEQVGLE----VPKD 364 Query 364 RGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIEL 423 +G+GHGKL+EELWE G L PTFV++FPV+T+PLTRQHRS+PGVTEKWDLY+RG EL Sbjct 365 KGYGHGKLVEELWEHQCGDQLFEPTFVRNFPVETSPLTRQHRSLPGVTEKWDLYVRGFEL 424 Query 424 ATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLL 483 ATGYSEL DP++QRERF DQAR A+AGDDEAMVLDE+FLAA+E GMPP TGTGMGIDRLL Sbjct 425 ATGYSELVDPIIQRERFMDQARLASAGDDEAMVLDEEFLAAMEQGMPPTTGTGMGIDRLL 484 Query 484 MSLTGLSIRETVLFPIVRPHS 504 M+LTGL IRET+LFPIVRP + Sbjct 485 MALTGLGIRETILFPIVRPSA 505 >gi|312138065|ref|YP_004005401.1| lysyl-tRNA synthetase [Rhodococcus equi 103S] gi|311887404|emb|CBH46716.1| lysyl-tRNA ligase LysS [Rhodococcus equi 103S] Length=503 Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/499 (73%), Positives = 429/499 (86%), Gaps = 4/499 (0%) Query 4 ADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVG 63 A +D PEQ RIRR+KR RLLAQG++PYPV+VPRTH+LAE+RA +PDL D++T + VG Sbjct 6 AQPVDDTPEQLRIRREKRERLLAQGQEPYPVSVPRTHSLAEIRAKYPDLEPDSSTGEQVG 65 Query 64 VAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAV 123 V GRVIF RN+GKLCFATLQ+GDGTQLQ M+SL VG+ AL AWK+DVDLGD V+VHG V Sbjct 66 VVGRVIFVRNTGKLCFATLQEGDGTQLQAMLSLANVGEDALAAWKSDVDLGDFVFVHGEV 125 Query 124 ISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIA 183 ISSRRGELSV+AD W++AAKSLRP+PVAHKEMSEESRVRQRY DLI+RPEAR +AR R+A Sbjct 126 ISSRRGELSVMADTWQMAAKSLRPMPVAHKEMSEESRVRQRYADLIIRPEARDMARKRVA 185 Query 184 VVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIV 243 VVR +R AL+RRGFLEVETP+LQTL GGAAARPF THSNALDIDLYLRIAPELFLKRC+V Sbjct 186 VVRELRNALERRGFLEVETPMLQTLHGGAAARPFVTHSNALDIDLYLRIAPELFLKRCVV 245 Query 244 GGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTR 303 GG +KVFE+NR FRNEG DSTHSPEF+MLETY+ YGTYDDSA + REL+QEVA A GT+ Sbjct 246 GGIEKVFEINRNFRNEGVDSTHSPEFAMLETYEAYGTYDDSAKMIRELVQEVAQAAFGTQ 305 Query 304 QLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDN 363 + L DG+ YD+ GEW T++MYPSLS A+G ++TP TTV+ L +A+ +GLE + + Sbjct 306 VVTLADGTEYDLSGEWKTMEMYPSLSAAIGVDVTPDTTVEELLALAERVGLE----VPKD 361 Query 364 RGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIEL 423 +G+GHGKL+EELWE G L PTFV++FPV+T+PLTRQHRS+PGVTEKWDLY+RG EL Sbjct 362 KGYGHGKLVEELWEHQCGDQLFEPTFVRNFPVETSPLTRQHRSLPGVTEKWDLYVRGFEL 421 Query 424 ATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLL 483 ATGYSEL DP++QRERF DQAR A+AGDDEAMVLDE+FLAA+E GMPP TGTGMGIDRLL Sbjct 422 ATGYSELVDPIIQRERFMDQARLASAGDDEAMVLDEEFLAAMEQGMPPTTGTGMGIDRLL 481 Query 484 MSLTGLSIRETVLFPIVRP 502 M+LTGL IRET+LFPIVRP Sbjct 482 MALTGLGIRETILFPIVRP 500 >gi|226363746|ref|YP_002781528.1| lysyl-tRNA synthetase [Rhodococcus opacus B4] gi|226242235|dbj|BAH52583.1| lysyl-tRNA synthetase [Rhodococcus opacus B4] Length=503 Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/502 (73%), Positives = 426/502 (85%), Gaps = 4/502 (0%) Query 3 AADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIV 62 AA +D PEQ RIR++KR R+LA+GR+ YPV+V RTH+LAE+RA +P+L DTAT D V Sbjct 5 AAQPVDDTPEQLRIRQEKRERILAEGREAYPVSVARTHSLAEIRAKYPELEPDTATGDQV 64 Query 63 GVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGA 122 G+ GRVIF RN+GKLCFATLQ+GDGTQLQ MISL VG+ AL +WKADVDLGD V+VHG Sbjct 65 GIVGRVIFVRNTGKLCFATLQEGDGTQLQAMISLAAVGEDALASWKADVDLGDFVFVHGE 124 Query 123 VISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRI 182 VISSRRGELSV+AD W+IA+KSLRPLPVAHKEM+EESRVRQRY DLIVRPEAR AR R+ Sbjct 125 VISSRRGELSVMADSWQIASKSLRPLPVAHKEMNEESRVRQRYADLIVRPEARDNARKRV 184 Query 183 AVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCI 242 +VVR +R AL+RRGFLEVETP+LQT+AGGAAARPF THSNALDIDLYLRIAPELFLKRC+ Sbjct 185 SVVRELRNALERRGFLEVETPMLQTVAGGAAARPFITHSNALDIDLYLRIAPELFLKRCV 244 Query 243 VGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGT 302 VGG +KVFE+NR FRNEG DSTHSPEF+MLETY+ YGTYDDSAV+ REL+QEVA A G+ Sbjct 245 VGGIEKVFEINRNFRNEGVDSTHSPEFAMLETYEAYGTYDDSAVMIRELVQEVAQAAFGS 304 Query 303 RQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHD 362 + + L DG+ YD+ GEW T++MYPSLS A+G ++TP TTV+ L +A+ +GLE + Sbjct 305 QVVTLADGTEYDLSGEWKTLEMYPSLSQAIGVDVTPDTTVEELLALAEKVGLE----VPK 360 Query 363 NRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIE 422 ++G+GHGKL+EELWE G L PTFV+DFPV+T+PLTR HRS GVTEKWDLY+RG E Sbjct 361 DKGYGHGKLVEELWEHQCGDQLFEPTFVRDFPVETSPLTRDHRSKAGVTEKWDLYIRGFE 420 Query 423 LATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRL 482 LATGYSEL DPV+QRERF DQAR A+AGDDEAM LDE+FLAA+E GMPP TGTGMGIDRL Sbjct 421 LATGYSELVDPVIQRERFVDQARLASAGDDEAMALDEEFLAAMEQGMPPTTGTGMGIDRL 480 Query 483 LMSLTGLSIRETVLFPIVRPHS 504 LM+LTGL IRET+LFPIVRP S Sbjct 481 LMALTGLGIRETILFPIVRPSS 502 >gi|111021392|ref|YP_704364.1| lysyl-tRNA synthetase [Rhodococcus jostii RHA1] gi|110820922|gb|ABG96206.1| lysine--tRNA ligase [Rhodococcus jostii RHA1] Length=503 Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/502 (73%), Positives = 423/502 (85%), Gaps = 4/502 (0%) Query 3 AADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIV 62 AA +D PEQ RIR++KR R+LA+GR+ YPV+V RTH+LAE+RA +P+L DTAT D V Sbjct 5 AAQPVDDTPEQLRIRQEKRERILAEGREAYPVSVARTHSLAEIRAKYPELEPDTATGDQV 64 Query 63 GVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGA 122 GV GRVIF RN+GKLCFATLQ+GDGTQLQ MISL VG+ AL WKADVDLGD V+VHG Sbjct 65 GVVGRVIFVRNTGKLCFATLQEGDGTQLQAMISLAAVGEDALALWKADVDLGDFVFVHGE 124 Query 123 VISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRI 182 VISSRRGELSV+AD W+IA+KSLRPLPVAHKEM+EESRVRQRY DLIVR EAR AR R+ Sbjct 125 VISSRRGELSVMADSWQIASKSLRPLPVAHKEMNEESRVRQRYADLIVRSEARENARKRV 184 Query 183 AVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCI 242 AVVR +R AL+ RGFLEVETP+LQT+AGGAAARPF THSNALDIDLYLRIAPELFLKRC+ Sbjct 185 AVVRELRNALELRGFLEVETPMLQTVAGGAAARPFITHSNALDIDLYLRIAPELFLKRCV 244 Query 243 VGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGT 302 VGG +KVFE+NR FRNEG DSTHSPEF+MLETY+ YGTYDDSAV+ REL+QEVA A G+ Sbjct 245 VGGIEKVFEINRNFRNEGVDSTHSPEFAMLETYEAYGTYDDSAVMIRELVQEVAQAAFGS 304 Query 303 RQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHD 362 + + L DG+ YD+ GEW T++MYPSLS A+G E+TP TTV+ L +A+ +GLE + Sbjct 305 QVVTLADGTEYDLSGEWKTLEMYPSLSQAIGVEVTPDTTVEELLALAEKVGLE----VPK 360 Query 363 NRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIE 422 ++G+GHGKL+EELWE G L PTFV+DFPV+T+PLTR HRS GVTEKWDLY+RG E Sbjct 361 DKGYGHGKLVEELWEHQCGDQLFEPTFVRDFPVETSPLTRDHRSKAGVTEKWDLYIRGFE 420 Query 423 LATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRL 482 LATGYSEL DPV+QRERF DQAR A+AGDDEAM LDE+FLAA+E GMPP TGTGMGIDRL Sbjct 421 LATGYSELVDPVIQRERFVDQARLASAGDDEAMALDEEFLAAMEQGMPPTTGTGMGIDRL 480 Query 483 LMSLTGLSIRETVLFPIVRPHS 504 LM+LTGL IRET+LFPIVRP S Sbjct 481 LMALTGLGIRETILFPIVRPSS 502 >gi|333918012|ref|YP_004491593.1| Lysyl-tRNA synthetase [Amycolicicoccus subflavus DQS3-9A1] gi|333480233|gb|AEF38793.1| Lysyl-tRNA synthetase [Amycolicicoccus subflavus DQS3-9A1] Length=525 Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/491 (74%), Positives = 414/491 (85%), Gaps = 4/491 (0%) Query 12 EQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGRVIFA 71 EQ RIRR+KR R++ G D YPV V RTHTL E+R + DL +T DIVGVAGRV+F Sbjct 34 EQLRIRREKRDRIIETGGDAYPVTVRRTHTLTEIREKYTDLSAGDSTGDIVGVAGRVMFI 93 Query 72 RNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRRGEL 131 RN+GKLCFA LQ+G G QLQVM+S +VG L AWK+DVDLGD V+VHG VISSRRGEL Sbjct 94 RNTGKLCFAVLQEGAGAQLQVMLSQAEVGPELLAAWKSDVDLGDFVFVHGEVISSRRGEL 153 Query 132 SVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIRTA 191 SVLAD W +AAK+LRPLPVAHKE+SEE+R+RQRYVDLIVRPEAR AR R+AVVR +R A Sbjct 154 SVLADTWEMAAKALRPLPVAHKELSEEARIRQRYVDLIVRPEARDTARKRVAVVRELRNA 213 Query 192 LQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVGGFDKVFE 251 L+RRGFLEVETP+LQTL GGAAARPF THSNALDIDLYLRIAPELFLKRC+VGG +KVFE Sbjct 214 LERRGFLEVETPMLQTLHGGAAARPFVTHSNALDIDLYLRIAPELFLKRCVVGGIEKVFE 273 Query 252 LNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLPDGS 311 +NR FRNEGADS+HSPEF+MLETY+ YGTYDDSA +TRE++QEVAD A GTRQL L DGS Sbjct 274 INRNFRNEGADSSHSPEFAMLETYEAYGTYDDSARMTREIVQEVADAAFGTRQLVLADGS 333 Query 312 VYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGHGKL 371 YDIDGEW ++MYPSLS ALGE++TP T +++LR A GLE I + +G+GHGKL Sbjct 334 PYDIDGEWQVLEMYPSLSEALGEDVTPDTNIEQLRSFAARTGLE----IPEGKGYGHGKL 389 Query 372 IEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYSELS 431 +EELWE VG L+ PTFV+DFPV+T+PLTRQHR+ GVTEKWDLY+RG ELATGYSEL Sbjct 390 VEELWEHLVGNDLARPTFVRDFPVETSPLTRQHRTKSGVTEKWDLYVRGFELATGYSELV 449 Query 432 DPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTGLSI 491 DPV+QRERF DQAR AAAGDDEAM LDEDFLAA+E+GMPP TGTGMGIDRLLM+LTGL I Sbjct 450 DPVIQRERFVDQARLAAAGDDEAMALDEDFLAAMEHGMPPTTGTGMGIDRLLMALTGLGI 509 Query 492 RETVLFPIVRP 502 RET+LFPIVRP Sbjct 510 RETILFPIVRP 520 >gi|326384068|ref|ZP_08205751.1| lysyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395] gi|326197228|gb|EGD54419.1| lysyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395] Length=510 Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/493 (72%), Positives = 410/493 (84%), Gaps = 5/493 (1%) Query 11 PEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGRVIF 70 PEQ R+R++KR R+L +GR YPVAV RTH+LAE+RA +PDL T T + VGVAGR+IF Sbjct 20 PEQVRVRQEKRERILDEGRQAYPVAVERTHSLAEIRAQYPDLEAGTETGEQVGVAGRIIF 79 Query 71 ARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRRGE 130 RN GKLCFATLQ+GDGTQLQ M+S + VG+ AL WKAD DLGDIV+VHG VISSR GE Sbjct 80 LRNKGKLCFATLQEGDGTQLQAMVSFNGVGEEALARWKADTDLGDIVFVHGEVISSRTGE 139 Query 131 LSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIRT 190 LS++AD W +A+K+LRPLPVAHKEM+EESRVRQRYVDLIVRPEARA+AR R+ V+ +R Sbjct 140 LSIMADSWEMASKALRPLPVAHKEMNEESRVRQRYVDLIVRPEARAIARTRVEVMAQLRK 199 Query 191 ALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVGGFDKVF 250 + RGFLEVETP+LQTL GGAAARPF THSNA D+DL+LRIAPELFLKRC+VGG ++VF Sbjct 200 FMTDRGFLEVETPMLQTLHGGAAARPFVTHSNAFDMDLFLRIAPELFLKRCVVGGIERVF 259 Query 251 ELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLPDG 310 E+NR FRNEGADSTHSPEF+MLETYQ YGTYDD+AV+TREL+Q VA A+GT +PDG Sbjct 260 EVNRNFRNEGADSTHSPEFAMLETYQAYGTYDDAAVMTRELVQSVAMGALGTLTPTMPDG 319 Query 311 SVYDIDGEWATIQMYPSLSVALGEEITP-QTTVDRLRGIADSLGLEKDPAIHDNRGFGHG 369 S YD+ GEW + MYPSLS ALGEEI P QTTVD L IAD +GLE + ++G+GHG Sbjct 320 STYDLSGEWTELSMYPSLSEALGEEIVPAQTTVDELLKIADRVGLE----VPKDKGYGHG 375 Query 370 KLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYSE 429 KL+EELWE VG L P FV+DFPV+T+PL R HRSIPGV EKWDLY+RG ELATGYSE Sbjct 376 KLVEELWEHLVGSKLDEPVFVRDFPVETSPLVRSHRSIPGVVEKWDLYVRGFELATGYSE 435 Query 430 LSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTGL 489 L DPV+QRERF DQAR AAAGDDEAMVLDE+FL A+E+GMPP GTGMGIDRLLM+LTGL Sbjct 436 LVDPVIQRERFVDQARLAAAGDDEAMVLDEEFLVAMEHGMPPTAGTGMGIDRLLMALTGL 495 Query 490 SIRETVLFPIVRP 502 IRETVLFP+V+P Sbjct 496 GIRETVLFPLVKP 508 >gi|226304130|ref|YP_002764088.1| lysyl-tRNA synthetase [Rhodococcus erythropolis PR4] gi|229494517|ref|ZP_04388280.1| lysyl-tRNA synthetase [Rhodococcus erythropolis SK121] gi|226183245|dbj|BAH31349.1| lysyl-tRNA synthetase [Rhodococcus erythropolis PR4] gi|229318879|gb|EEN84737.1| lysyl-tRNA synthetase [Rhodococcus erythropolis SK121] Length=503 Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/501 (74%), Positives = 424/501 (85%), Gaps = 4/501 (0%) Query 4 ADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVG 63 A +D PEQ RIRR+KR R+LAQG++ YPV+V RTHTLA++RA +P+L DTAT +VG Sbjct 6 AQPVDDTPEQLRIRREKRERILAQGQEAYPVSVDRTHTLAQIRAEYPELEPDTATGVLVG 65 Query 64 VAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAV 123 V GRVIF RN+GKLCFATLQ+GDGTQLQ MISL VG+ AL AWK+DVDLGD V++HG V Sbjct 66 VVGRVIFMRNTGKLCFATLQEGDGTQLQAMISLAGVGEEALAAWKSDVDLGDFVFIHGEV 125 Query 124 ISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIA 183 ISSRRGELSV+AD W+IA+KSLRPLPVAHKEMSEESRVRQRY DLIVRPEAR AR R+A Sbjct 126 ISSRRGELSVMADAWQIASKSLRPLPVAHKEMSEESRVRQRYADLIVRPEARDNARKRVA 185 Query 184 VVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIV 243 VVRA+R AL+ RGFLEVETP+LQTL GGAAARPF THSNALDIDLYLRIAPELFLKRC+V Sbjct 186 VVRALRNALESRGFLEVETPMLQTLHGGAAARPFVTHSNALDIDLYLRIAPELFLKRCVV 245 Query 244 GGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTR 303 GG +KVFE+NR FRNEG DSTHSPEF+MLETY+ YGTYDDSA + REL+QEVA EA GT+ Sbjct 246 GGIEKVFEINRNFRNEGVDSTHSPEFAMLETYEAYGTYDDSAKMIRELVQEVAQEAFGTQ 305 Query 304 QLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDN 363 L L DGS YD+ GEW ++MYPSLS A+G E+TP TTVD L +A+ +GLE + + Sbjct 306 VLTLADGSEYDVSGEWQVLEMYPSLSAAIGTEVTPDTTVDELLALAEKVGLE----VPKD 361 Query 364 RGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIEL 423 +G+GHGKL+EELWE G L PTFV+DFPV+T+PLTR HRS GVTEKWDLY+RG EL Sbjct 362 KGYGHGKLVEELWEHQCGDQLYVPTFVRDFPVETSPLTRDHRSKKGVTEKWDLYIRGFEL 421 Query 424 ATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLL 483 ATGYSEL DPV+QRERF DQAR A+AGDDEAMVLDE+FLAA+E GMPP TGTGMGIDRLL Sbjct 422 ATGYSELVDPVIQRERFVDQARLASAGDDEAMVLDEEFLAAMEQGMPPTTGTGMGIDRLL 481 Query 484 MSLTGLSIRETVLFPIVRPHS 504 M+LTGL IRET+LFPIVRP + Sbjct 482 MALTGLGIRETILFPIVRPSA 502 >gi|262203856|ref|YP_003275064.1| lysyl-tRNA synthetase [Gordonia bronchialis DSM 43247] gi|262087203|gb|ACY23171.1| lysyl-tRNA synthetase [Gordonia bronchialis DSM 43247] Length=507 Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/505 (70%), Positives = 421/505 (84%), Gaps = 9/505 (1%) Query 3 AADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIV 62 A DT + PEQ RIRR+KR R+LAQGRD YPV++PRTHTLA++RA HPDL T T + V Sbjct 5 ATDTEDQTPEQLRIRREKRERILAQGRDAYPVSIPRTHTLAQIRADHPDLEAGTETGEHV 64 Query 63 GVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGA 122 GVAGRVIF RN GKLCFATLQ+GDGTQLQ M+S + VG+ +L WKA+VDLGDIV++ G Sbjct 65 GVAGRVIFLRNKGKLCFATLQEGDGTQLQAMVSFNGVGEESLARWKAEVDLGDIVFISGE 124 Query 123 VISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRI 182 VISSR GELSV+A+ W +A+KSLRPLPVAHK+M+EE+RVRQRYVDLI+RPEAR++AR RI Sbjct 125 VISSRTGELSVMAERWEMASKSLRPLPVAHKDMNEETRVRQRYVDLIMRPEARSIARTRI 184 Query 183 AVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCI 242 +V+ +R AL RRGFLEVETP+LQTL GGAAARPF THSNA D+DL+LRIAPELFLKRC+ Sbjct 185 SVIAELRAALGRRGFLEVETPMLQTLHGGAAARPFVTHSNAFDMDLFLRIAPELFLKRCV 244 Query 243 VGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGT 302 VGG ++VFE+NR FRNEGADSTHSPEF+MLETYQ YGTYDD+A +TREL+QEV+ A+GT Sbjct 245 VGGIERVFEINRNFRNEGADSTHSPEFAMLETYQAYGTYDDAATMTRELVQEVSQAALGT 304 Query 303 RQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQ-----TTVDRLRGIADSLGLEKD 357 +PDG+ YD+ GEW ++QMYPSLS ALG EI P T+VD L IA +GLE Sbjct 305 LTPEMPDGTTYDLSGEWTSLQMYPSLSEALGREIVPMSEGGGTSVDELLAIAAEVGLE-- 362 Query 358 PAIHDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLY 417 I ++G+GHGKL+EELWE VG+ L+ P F++DFPV+T+PL R HRS+PGV EKWDLY Sbjct 363 --IPKDKGYGHGKLVEELWEHMVGEKLTQPVFIRDFPVETSPLVRAHRSVPGVVEKWDLY 420 Query 418 LRGIELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGM 477 +RG ELATGYSEL DP++QRERF DQAR AAAGDDEAM LDE+FLAA+EYGMPP GTGM Sbjct 421 VRGFELATGYSELVDPIIQRERFVDQARLAAAGDDEAMALDEEFLAAMEYGMPPTAGTGM 480 Query 478 GIDRLLMSLTGLSIRETVLFPIVRP 502 GIDRLLM+LTGL IRET+LFP+V+P Sbjct 481 GIDRLLMALTGLGIRETILFPLVKP 505 >gi|343924361|ref|ZP_08763911.1| lysyl-tRNA synthetase [Gordonia alkanivorans NBRC 16433] gi|343765693|dbj|GAA10837.1| lysyl-tRNA synthetase [Gordonia alkanivorans NBRC 16433] Length=527 Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/499 (71%), Positives = 422/499 (85%), Gaps = 9/499 (1%) Query 11 PEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGRVIF 70 PEQ RIRR+KR R+L++GR+ YPV++PRTH+L E+RAA+PDL T T VGV+GRVIF Sbjct 33 PEQLRIRREKRERILSEGREAYPVSIPRTHSLGEIRAAYPDLEAGTETGQHVGVSGRVIF 92 Query 71 ARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRRGE 130 RN GKLCFATLQ+GDGTQLQ MIS + VG+ AL WK+DVDLGDIV++ G VISSR GE Sbjct 93 LRNKGKLCFATLQEGDGTQLQAMISFNGVGEDALGRWKSDVDLGDIVFISGEVISSRTGE 152 Query 131 LSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIRT 190 LSV+AD W++A+KSLRPLPVAHK+M+EE+RVRQRYVDLI+RPEAR++AR R++VV +R Sbjct 153 LSVMADGWQMASKSLRPLPVAHKDMNEETRVRQRYVDLIMRPEARSIARTRVSVVAELRA 212 Query 191 ALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVGGFDKVF 250 AL RRGFLEVETP+LQTL GGAAARPF THSNA D+DL+LRIAPELFLKRC+VGG ++VF Sbjct 213 ALDRRGFLEVETPMLQTLHGGAAARPFVTHSNAFDMDLFLRIAPELFLKRCVVGGIERVF 272 Query 251 ELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLPDG 310 E+NR FRNEGADSTHSPEF+MLETYQ YGTYDDSA + REL+QEV+ A+GT+ +PDG Sbjct 273 EINRNFRNEGADSTHSPEFAMLETYQAYGTYDDSARMIRELVQEVSQAALGTQTPTMPDG 332 Query 311 SVYDIDGEWATIQMYPSLSVALGEEITP-----QTTVDRLRGIADSLGLEKDPAIHDNRG 365 S YD+ GEW +++MYPSLS ALGEEI P +TTV++L IA +GLE + ++G Sbjct 333 STYDLSGEWTSLEMYPSLSEALGEEIVPAGNPGETTVEQLLAIAKRVGLE----VPKDKG 388 Query 366 FGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELAT 425 +GHGKL+EELWE VG+ LS P F++DFPV+T+PL R HRS+ GV EKWDLY+RG ELAT Sbjct 389 YGHGKLVEELWEHMVGEKLSEPVFIRDFPVETSPLVRSHRSVKGVVEKWDLYVRGFELAT 448 Query 426 GYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMS 485 GYSEL DPV+QRERF DQAR AAAGDDEAMVLDE+FLAA+EYGMPP TGTGMGIDRLLM+ Sbjct 449 GYSELVDPVIQRERFVDQARLAAAGDDEAMVLDEEFLAAMEYGMPPTTGTGMGIDRLLMA 508 Query 486 LTGLSIRETVLFPIVRPHS 504 LTGL IRET+LFP+V+P + Sbjct 509 LTGLGIRETILFPLVKPRT 527 >gi|300790538|ref|YP_003770829.1| lysyl-tRNA synthetase, class II [Amycolatopsis mediterranei U32] gi|299800052|gb|ADJ50427.1| lysyl-tRNA synthetase, class II [Amycolatopsis mediterranei U32] gi|340532225|gb|AEK47430.1| lysyl-tRNA synthetase [Amycolatopsis mediterranei S699] Length=503 Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/500 (69%), Positives = 408/500 (82%), Gaps = 7/500 (1%) Query 4 ADTAED-LPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIV 62 +D AED LPEQ R+RR+KR R+LA+G DPYPV VPRTH+LAEVRAAH DLP+DTAT + V Sbjct 9 SDPAEDELPEQMRVRREKRDRILAEGIDPYPVEVPRTHSLAEVRAAHADLPVDTATGEQV 68 Query 63 GVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGA 122 GV GRV+F RN+GKLCFA+L++GDGT+LQ MISL KVG+ AL AWK+DVDLGD V+V G Sbjct 69 GVTGRVMFLRNTGKLCFASLREGDGTELQAMISLAKVGEDALAAWKSDVDLGDHVFVQGE 128 Query 123 VISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRI 182 VI+S+RGELSV+AD WRI +K+LRPLP AHKE++EE+R+RQRYVDLI+RP AR V R R Sbjct 129 VITSKRGELSVMADAWRITSKALRPLPNAHKELAEETRIRQRYVDLIMRPRARDVVRTRA 188 Query 183 AVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCI 242 VVR++R + RRGF EVETP+LQTL GGA ARPF THSNA D++L+LRIAPEL+LKRC+ Sbjct 189 GVVRSLRESFHRRGFTEVETPMLQTLHGGATARPFVTHSNAFDMELFLRIAPELYLKRCV 248 Query 243 VGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGT 302 VGG +KVFE+NR FRNEG+DSTHSPEF+MLE Y+ Y TYD +AV+TR+LIQE A + T Sbjct 249 VGGIEKVFEINRNFRNEGSDSTHSPEFAMLEYYEAYATYDTNAVMTRQLIQEAAQTVLDT 308 Query 303 RQLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHD 362 + LPDGS YD+ GEW T+ MY SLS +LGEE+TP+T +L G A + GLE DP + Sbjct 309 LVVTLPDGSEYDLSGEWTTLGMYESLSDSLGEEVTPETPAAKLLGFAQARGLEVDPKL-- 366 Query 363 NRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIE 422 GHGKL+EELWE VG L APTFV+DFPV+T+PLTRQHRS PGV EKWDLY+RG E Sbjct 367 ----GHGKLVEELWEHLVGDHLHAPTFVRDFPVETSPLTRQHRSRPGVAEKWDLYVRGFE 422 Query 423 LATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRL 482 LATGYSEL DPVV+RER +Q+ AA GD EAM LDEDFL ALEYGMPP G GMGIDRL Sbjct 423 LATGYSELVDPVVERERLTEQSLLAAQGDSEAMRLDEDFLRALEYGMPPSGGVGMGIDRL 482 Query 483 LMSLTGLSIRETVLFPIVRP 502 LM+LTGL IRET+LFP VRP Sbjct 483 LMALTGLGIRETILFPQVRP 502 >gi|302530771|ref|ZP_07283113.1| lysyl-tRNA synthetase [Streptomyces sp. AA4] gi|302439666|gb|EFL11482.1| lysyl-tRNA synthetase [Streptomyces sp. AA4] Length=504 Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/495 (68%), Positives = 404/495 (82%), Gaps = 6/495 (1%) Query 8 EDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGR 67 +DLPEQ R+RRDKR R++A+G DPYPV VPRTHTLA++RA H L DT+T VGV GR Sbjct 15 DDLPEQMRVRRDKRDRIIAEGADPYPVEVPRTHTLAQIRAEHSGLEADTSTGQSVGVTGR 74 Query 68 VIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSR 127 V+F RN+GKLCFATL++GDGT+LQ M+SL +VG +L AWK+DVDLGD V+VHG VI+S+ Sbjct 75 VMFLRNTGKLCFATLREGDGTELQAMLSLAQVGPESLAAWKSDVDLGDHVFVHGEVITSK 134 Query 128 RGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRA 187 RGELSVLAD W+IAAK+LRPLPVA KE++EE+R+RQRYVDLI+RP AR V R R V+R+ Sbjct 135 RGELSVLADSWQIAAKALRPLPVAFKELAEETRIRQRYVDLIMRPRARDVVRTRSGVMRS 194 Query 188 IRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVGGFD 247 +R + RRGF EVETP+LQTL GGAAARPF THSNA D++L+LRIAPEL+LKRC+VGG + Sbjct 195 LRESFHRRGFTEVETPMLQTLHGGAAARPFVTHSNAFDLELFLRIAPELYLKRCVVGGIE 254 Query 248 KVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPL 307 KVFE+NR FRNEG+DS+HSPEF+MLE Y+ Y TYD +AV+TRELIQE A+ +GT+ + L Sbjct 255 KVFEINRNFRNEGSDSSHSPEFAMLEYYEAYATYDTNAVMTRELIQEAAENVLGTQVVTL 314 Query 308 PDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFG 367 DG+ YD+ GEW T+ MY SLS ALGEE+TP T + L IA + +E DP + Sbjct 315 ADGTEYDLSGEWTTLGMYESLSEALGEEVTPDTPAEALHKIAAAREIEVDPKL------A 368 Query 368 HGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGY 427 HGKL+EELWE VG L APTFV+DFP++T+PLTRQHRS PGV EKWDLY+RG ELATGY Sbjct 369 HGKLVEELWEHLVGDGLHAPTFVRDFPLETSPLTRQHRSRPGVAEKWDLYVRGFELATGY 428 Query 428 SELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLT 487 SEL DPVV+R+R +QAR AAAGD EAM LDEDFL ALEYGMPP G GMGIDRLLM+LT Sbjct 429 SELVDPVVERQRLTEQARLAAAGDSEAMRLDEDFLRALEYGMPPSGGVGMGIDRLLMALT 488 Query 488 GLSIRETVLFPIVRP 502 GL IRET+LFP+VRP Sbjct 489 GLGIRETILFPLVRP 503 >gi|134097022|ref|YP_001102683.1| lysyl-tRNA synthetase class II [Saccharopolyspora erythraea NRRL 2338] gi|291006232|ref|ZP_06564205.1| lysyl-tRNA synthetase class II [Saccharopolyspora erythraea NRRL 2338] gi|133909645|emb|CAL99757.1| lysyl-tRNA synthetase class II [Saccharopolyspora erythraea NRRL 2338] Length=507 Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/499 (68%), Positives = 405/499 (82%), Gaps = 6/499 (1%) Query 4 ADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVG 63 A+ +DLPEQ R+RR+KR R+LA G DPYPV +P THTLAEVRAAHPDL DT T D VG Sbjct 14 AEGVDDLPEQLRVRREKRERMLAGGVDPYPVNLPITHTLAEVRAAHPDLAPDTYTGDQVG 73 Query 64 VAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAV 123 VAGRV+F RN+GKLCFATL+ GDGT+LQ M+SL +VG+ AL +WK+DVDLGD V+VHG V Sbjct 74 VAGRVMFLRNTGKLCFATLRGGDGTELQAMLSLKQVGEDALASWKSDVDLGDHVFVHGEV 133 Query 124 ISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIA 183 I+SRRGELSV+AD WR+AAK+LRPLPVAHKE+ +E+RVRQRYVDLIVR +A R R Sbjct 134 ITSRRGELSVMADEWRLAAKTLRPLPVAHKELGDETRVRQRYVDLIVRKQAADTVRTRAT 193 Query 184 VVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIV 243 V R++R + QRRGF+EVETP+LQTL GGAAARPF THSNA D++LYLRIAPEL+LKRC+V Sbjct 194 VQRSLRDSFQRRGFIEVETPMLQTLHGGAAARPFVTHSNAFDMELYLRIAPELYLKRCVV 253 Query 244 GGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTR 303 GG +KVFE+NR FRNEG+DS+HSPEF+MLE YQ Y YD A +TR+L+QE A+ G++ Sbjct 254 GGIEKVFEINRNFRNEGSDSSHSPEFAMLEFYQAYSDYDGMARLTRQLVQEAAEALTGSQ 313 Query 304 QLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDN 363 + DG+ YD+ GEW+++ MY SLS AL EITP+T V+ LR ADS+GL+ DPA Sbjct 314 VVTWFDGTEYDLSGEWSSVTMYGSLSEALDSEITPETPVEVLRKHADSVGLQTDPA---- 369 Query 364 RGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIEL 423 GHGKL+EELWE VG L APTFV+DFP++T PLTRQHRS PGV EKWDLY RG EL Sbjct 370 --HGHGKLVEELWEHLVGDHLYAPTFVRDFPLETAPLTRQHRSEPGVAEKWDLYTRGFEL 427 Query 424 ATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLL 483 ATGYSEL DPVV+R R +QAR AA+GD+EAM +DEDFL ALEYGMPP G GMGIDRLL Sbjct 428 ATGYSELVDPVVERARLEEQARLAASGDEEAMHVDEDFLRALEYGMPPSGGVGMGIDRLL 487 Query 484 MSLTGLSIRETVLFPIVRP 502 M+LTGL IRET+LFP+VRP Sbjct 488 MALTGLGIRETILFPLVRP 506 >gi|334564008|ref|ZP_08516999.1| lysyl-tRNA synthetase [Corynebacterium bovis DSM 20582] Length=515 Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/519 (67%), Positives = 408/519 (79%), Gaps = 21/519 (4%) Query 1 VSAADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPD--------- 51 ++ A DLPEQ RIRR+KR R+L GRDPYPV V RTH+L E+R A+ Sbjct 1 MTDAKNQTDLPEQLRIRREKRQRMLEDGRDPYPVEVARTHSLREIRDAYSVEEPREGARV 60 Query 52 LPIDTATEDIVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADV 111 L T+ VGVAGRV+F RN+GKLCFA+LQDGDGTQLQVM+SL +VG+ AL WKADV Sbjct 61 LATGEETDVEVGVAGRVMFVRNTGKLCFASLQDGDGTQLQVMLSLAEVGEEALAQWKADV 120 Query 112 DLGDIVYVHGAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVR 171 DLGDIV VHG +I+SRRGELSV+AD W +A+KSLRPLPVAHK++SE++RVR RY DLI+R Sbjct 121 DLGDIVSVHGRIIASRRGELSVMADSWAMASKSLRPLPVAHKDLSEDTRVRHRYTDLIMR 180 Query 172 PEARAVARLRIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLR 231 EAR A RI V+RA+RTAL+RRGFLEVETP+LQTL GGAAARPF THSNALDIDLYLR Sbjct 181 EEARRNALTRIRVMRALRTALERRGFLEVETPMLQTLHGGAAARPFVTHSNALDIDLYLR 240 Query 232 IAPELFLKRCIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTREL 291 IAPEL+LKRC+VGG D+VFE+NR FRNEG DS+HSPEF+MLETYQ YGTYDD A RE+ Sbjct 241 IAPELYLKRCVVGGIDRVFEINRNFRNEGVDSSHSPEFAMLETYQAYGTYDDGARTIREV 300 Query 292 IQEVADEAIGTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGE------EITPQTTVDRL 345 IQEVA E G+ + L DG+ YD+ GEW +++MYPSL+ AL + E+T +TV+ L Sbjct 301 IQEVAQEVFGSTTVTLADGTEYDLGGEWPSMEMYPSLNAALRKRFDDRFEVTVDSTVEEL 360 Query 346 RGIADSLGLEKDPAIHDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHR 405 +AD++GLE G+GHGKL+EELWE L P FV++FPV+T+PLTRQHR Sbjct 361 TAVADAVGLEV------GTGWGHGKLVEELWEHMCSDQLGGPVFVRNFPVETSPLTRQHR 414 Query 406 SIPGVTEKWDLYLRGIELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAAL 465 + GVTEKWDLY+RG ELATGYSEL DPVVQRERF DQAR AA GDDEAMVLDEDFLAA+ Sbjct 415 TERGVTEKWDLYVRGFELATGYSELVDPVVQRERFEDQARLAAGGDDEAMVLDEDFLAAM 474 Query 466 EYGMPPCTGTGMGIDRLLMSLTGLSIRETVLFPIVRPHS 504 E GMPP GTGMG+DRLLM+LTGL IR+TVLFP+V+P + Sbjct 475 EQGMPPTAGTGMGVDRLLMALTGLGIRDTVLFPMVKPEA 513 >gi|256374484|ref|YP_003098144.1| lysyl-tRNA synthetase [Actinosynnema mirum DSM 43827] gi|255918787|gb|ACU34298.1| lysyl-tRNA synthetase [Actinosynnema mirum DSM 43827] Length=503 Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/495 (68%), Positives = 398/495 (81%), Gaps = 6/495 (1%) Query 8 EDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGR 67 +DLPEQ R+RR+KRARLL +G DPYPV V RTH+L EVR AH L DT T ++VGV GR Sbjct 14 DDLPEQLRVRREKRARLLERGVDPYPVEVARTHSLREVREAHTGLDPDTGTGEVVGVTGR 73 Query 68 VIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSR 127 V+F RN+GKL FATL++GDGT+LQ M+SL+KVG+ AL WK+DVDLGD V+V G VI+SR Sbjct 74 VMFIRNTGKLAFATLREGDGTELQAMLSLNKVGEQALADWKSDVDLGDHVFVRGEVITSR 133 Query 128 RGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRA 187 RGELSV+AD W I AK+LRPLPVAHKE++EE+R+RQRYVDLI+R +AR R R +VR+ Sbjct 134 RGELSVMADEWAITAKALRPLPVAHKELAEETRIRQRYVDLILREQARDTVRNRAKLVRS 193 Query 188 IRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVGGFD 247 +R + RRGF EVETP+LQTL GGAAARPF T SNALDIDL+LRIAPEL+LKRC+VGG + Sbjct 194 LRESFHRRGFTEVETPMLQTLQGGAAARPFVTRSNALDIDLFLRIAPELYLKRCVVGGIE 253 Query 248 KVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPL 307 KVFE+NR FRNEG DS+HSPEFSMLE Y+ Y TYD +AV+TRELIQE A G+ + L Sbjct 254 KVFEINRNFRNEGIDSSHSPEFSMLEYYEAYATYDTNAVMTRELIQEAAMAVAGSHVVTL 313 Query 308 PDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFG 367 DG+ YD+ GEW T+ MY SLS A G E+TP T+VD LR +AD LGLE DP + G Sbjct 314 VDGTEYDLGGEWTTLTMYGSLSEAAGVEVTPGTSVDDLRALADKLGLETDPKL------G 367 Query 368 HGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGY 427 HGKL+EELWE VG L APTFV+DFPV+T+PLTRQHRS PGV EKWDLY+RG ELATGY Sbjct 368 HGKLVEELWEHLVGDHLHAPTFVRDFPVETSPLTRQHRSTPGVAEKWDLYVRGFELATGY 427 Query 428 SELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLT 487 SEL DPVV+RER QAR A+GD EAM +DEDFL +LEYGMPP G GMGIDRLLM++T Sbjct 428 SELVDPVVERERLEAQARLGASGDVEAMPVDEDFLRSLEYGMPPSGGVGMGIDRLLMAIT 487 Query 488 GLSIRETVLFPIVRP 502 GL IRET+LFP+VRP Sbjct 488 GLGIRETILFPLVRP 502 >gi|336324760|ref|YP_004604726.1| lysyl-tRNA synthetase [Corynebacterium resistens DSM 45100] gi|336100742|gb|AEI08562.1| lysyl-tRNA synthetase [Corynebacterium resistens DSM 45100] Length=535 Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/528 (65%), Positives = 407/528 (78%), Gaps = 31/528 (5%) Query 5 DTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPID--------- 55 ++A+DLPEQ RIRRDKR R+L G+D YPV VPRTH+LAEVRA LP + Sbjct 11 ESAQDLPEQARIRRDKRTRILESGKDAYPVEVPRTHSLAEVRARWEVLPKEGDEGEAPGV 70 Query 56 ------------TATEDIVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAA 103 T+++VGVAGRV+F RN+GKL FATLQDGDGT LQVM+SL +VG+ A Sbjct 71 ERKEGVTYLQSGEETQEVVGVAGRVMFVRNTGKLAFATLQDGDGTTLQVMLSLAEVGEEA 130 Query 104 LDAWKADVDLGDIVYVHGAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQ 163 L+ WKA VDLGD+V+V G +ISSRRGELSV+A W + AKSLRPLPVAHKEMSE++R+R Sbjct 131 LNDWKALVDLGDMVFVEGRIISSRRGELSVMAQRWFMTAKSLRPLPVAHKEMSEDTRIRH 190 Query 164 RYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNA 223 RY DLI+R +AR A RI V+RA+R AL+RRGFLE+ETP+LQTL GGAAARPF THSNA Sbjct 191 RYTDLIMREQARKNAMTRIKVMRALRNALERRGFLELETPMLQTLHGGAAARPFITHSNA 250 Query 224 LDIDLYLRIAPELFLKRCIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDD 283 LDIDLYLRIAPELFLKR +VGG D+VFE+NR FRNEG DS+HSPEF+MLETYQ YG Y+ Sbjct 251 LDIDLYLRIAPELFLKRAVVGGLDRVFEVNRNFRNEGVDSSHSPEFAMLETYQAYGDYNT 310 Query 284 SAVVTRELIQEVADEAIGTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGE------EIT 337 +A TRE+IQEVA E GT ++ L DG+ YD+ GEW I+MYPSL+ AL + E+T Sbjct 311 AATATREIIQEVAIEVFGTTKVTLVDGTEYDLGGEWPEIKMYPSLNEALQKKHPGQPEVT 370 Query 338 PQTTVDRLRGIADSLGLEKDPAIHDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQT 397 +TV+ L+ +A +GLE + G+GHGKL+EELWE L P FV+DFPV+T Sbjct 371 IDSTVEELKELAKVVGLE----VTAKGGWGHGKLVEELWEHLCEDQLDGPIFVRDFPVET 426 Query 398 TPLTRQHRSIPGVTEKWDLYLRGIELATGYSELSDPVVQRERFADQARAAAAGDDEAMVL 457 +PL RQHRS PGVTEKWDLY+RG ELATGYSEL DPV+QRERF DQAR AA GDDEAMVL Sbjct 427 SPLVRQHRSEPGVTEKWDLYVRGFELATGYSELIDPVIQRERFEDQARLAAGGDDEAMVL 486 Query 458 DEDFLAALEYGMPPCTGTGMGIDRLLMSLTGLSIRETVLFPIVRPHSN 505 DEDFLAA+E GMPP GTGMGIDRLLM+LTGL IRET+LFP+V+P + Sbjct 487 DEDFLAAMEQGMPPTAGTGMGIDRLLMALTGLGIRETILFPLVKPERD 534 >gi|340793461|ref|YP_004758924.1| lysyl-tRNA synthetase [Corynebacterium variabile DSM 44702] gi|340533371|gb|AEK35851.1| lysyl-tRNA synthetase [Corynebacterium variabile DSM 44702] Length=540 Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/525 (65%), Positives = 403/525 (77%), Gaps = 32/525 (6%) Query 7 AEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTA--------- 57 A DLPEQ +IRR+KRARLLA+G+D YPV V RT TL+E+ AA+ LP D Sbjct 18 AADLPEQLKIRREKRARLLAEGKDAYPVVVDRTRTLSEILAAYAVLPKDEEEAAAVERVE 77 Query 58 ----------TEDIVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAW 107 T D VGVAGRVIF RN+GKL FA LQ+GDGTQ+Q M+SL +VG+ AL +W Sbjct 78 GVTYLAPGEETTDEVGVAGRVIFVRNTGKLAFARLQEGDGTQMQAMLSLAEVGEDALASW 137 Query 108 KADVDLGDIVYVHGAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVD 167 K DVDLGDIV+VHG V++S+RGELSV+AD W +A+KSLRPLPVAHKEMSE++R+R RY D Sbjct 138 KTDVDLGDIVFVHGRVVASKRGELSVMADSWSMASKSLRPLPVAHKEMSEDTRIRHRYTD 197 Query 168 LIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDID 227 LI+R +AR A RI V+RA+R AL+RRGFLEVETP+LQTL GGAAARPF THSNALDID Sbjct 198 LIMREQARTNAMTRIKVMRALRNALERRGFLEVETPMLQTLHGGAAARPFETHSNALDID 257 Query 228 LYLRIAPELFLKRCIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVV 287 LYLRIAPEL+LKRC+VGG DKVFE+NR FRNEG DS+HSPEF+MLETYQ YGTYD A + Sbjct 258 LYLRIAPELYLKRCVVGGIDKVFEVNRNFRNEGVDSSHSPEFAMLETYQAYGTYDTGAQL 317 Query 288 TRELIQEVADEAIGTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGE---------EITP 338 ++IQE+A E G+ + L DG+ YD GEW ++MYPSL+ ALG E+T Sbjct 318 IHDIIQEIAVEVFGSTTVTLVDGTGYDFGGEWRVMEMYPSLNEALGRKFPEQTAVAEVTI 377 Query 339 QTTVDRLRGIADSLGLEKDPAIHDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTT 398 +TV+ L+ +A+ +GL P G+GHGKL+EE+WE L P FV+DFPV+T+ Sbjct 378 DSTVEELKALAEDIGLVVPP----KGGWGHGKLVEEIWEYLCEDQLYGPVFVRDFPVETS 433 Query 399 PLTRQHRSIPGVTEKWDLYLRGIELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLD 458 PLTRQHRS PGV EKWDLY+RG ELATGYSEL DPV+QRERF DQAR AA GDDEAMVLD Sbjct 434 PLTRQHRSKPGVAEKWDLYVRGFELATGYSELVDPVIQRERFEDQARLAADGDDEAMVLD 493 Query 459 EDFLAALEYGMPPCTGTGMGIDRLLMSLTGLSIRETVLFPIVRPH 503 EDFLAA+E GMPP +G GMGIDRLLM+LTGL IRETVLFP+V+P Sbjct 494 EDFLAAMEQGMPPTSGNGMGIDRLLMALTGLGIRETVLFPMVKPE 538 >gi|152964545|ref|YP_001360329.1| lysyl-tRNA synthetase [Kineococcus radiotolerans SRS30216] gi|189082961|sp|A6W5H6.1|SYK_KINRD RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|151359062|gb|ABS02065.1| lysyl-tRNA synthetase [Kineococcus radiotolerans SRS30216] Length=500 Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/495 (67%), Positives = 391/495 (79%), Gaps = 5/495 (1%) Query 8 EDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGR 67 ED+PEQ R+RR+KR R+LA G + YPV+VPRT +LA++R + L T D VGV GR Sbjct 10 EDVPEQVRVRREKRDRILAAGGEAYPVSVPRTDSLADLRERYAHLEAGEETTDQVGVTGR 69 Query 68 VIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSR 127 V+F R +GKL FATLQ+GDGT+LQVM+S D VG+ AL AWK+DVDLGDIV+VHG VISSR Sbjct 70 VVFLRGTGKLAFATLQEGDGTRLQVMVSRDGVGEDALAAWKSDVDLGDIVFVHGNVISSR 129 Query 128 RGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRA 187 RGELSVLAD WR+A+KSLRPLPV HKE+SEE+RVRQRYVDLIVR AR R R VVRA Sbjct 130 RGELSVLADSWRMASKSLRPLPVLHKELSEETRVRQRYVDLIVREAARTNVRARSNVVRA 189 Query 188 IRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVGGFD 247 +R L+ RGFLEVETP+LQTL GGA+ARPF T SNA D +LYLRIAPELFLKRC+VGG + Sbjct 190 LRRTLEDRGFLEVETPMLQTLHGGASARPFVTRSNAFDTELYLRIAPELFLKRCVVGGIE 249 Query 248 KVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPL 307 +VFE+NR FRNEGADSTHSPEF+MLETYQ +G YD +TR L+Q A EA GT+ + L Sbjct 250 RVFEINRNFRNEGADSTHSPEFAMLETYQAWGDYDSIGELTRALVQNAATEAFGTQLVTL 309 Query 308 PDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFG 367 DGS YD+ GEW +I MYPSLS +LGEEITP+T + L GIA+ LG+ D + Sbjct 310 ADGSEYDLGGEWTSISMYPSLSASLGEEITPETPREHLIGIAERLGISVDTV-----RWT 364 Query 368 HGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGY 427 HGKL+EELWE + SL +PTFV+DFPV+T+PL R HR +PGV EKWDLY+RG ELATGY Sbjct 365 HGKLVEELWEHRIADSLHSPTFVRDFPVETSPLVRGHRELPGVVEKWDLYVRGFELATGY 424 Query 428 SELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLT 487 SEL DPVVQRERF +QAR A GDDEAM +DEDFL A E+GMPP G GMGIDRLLM+LT Sbjct 425 SELVDPVVQRERFVEQARLADLGDDEAMRIDEDFLRAQEHGMPPTGGMGMGIDRLLMALT 484 Query 488 GLSIRETVLFPIVRP 502 GL IRET+ FP+V+P Sbjct 485 GLGIRETITFPLVKP 499 >gi|296392865|ref|YP_003657749.1| lysyl-tRNA synthetase [Segniliparus rotundus DSM 44985] gi|296180012|gb|ADG96918.1| lysyl-tRNA synthetase [Segniliparus rotundus DSM 44985] Length=503 Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/497 (67%), Positives = 397/497 (80%), Gaps = 4/497 (0%) Query 9 DLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGRV 68 DLPEQ RIRR+KR R+LA+G +PYPV +P TH LA++R D+ +T +V VAGRV Sbjct 10 DLPEQLRIRREKRDRVLARGEEPYPVELPVTHGLAQIREEFADIETGASTGVVVAVAGRV 69 Query 69 IFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRR 128 IF R++GKL FATLQ GDG +LQ M+SL VG+ L WK+DVDLGDIV+V G V+SS+R Sbjct 70 IFQRDAGKLLFATLQAGDGARLQAMVSLAGVGEEPLALWKSDVDLGDIVFVRGEVVSSKR 129 Query 129 GELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAI 188 GELSVLAD W+ AAK+LRPLPVAHKE+SEE++VRQRY+DLI+RPEAR+VAR R+AV+R + Sbjct 130 GELSVLADSWQFAAKALRPLPVAHKELSEEAQVRQRYLDLIMRPEARSVARTRVAVLREM 189 Query 189 RTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVGGFDK 248 R AL+RRGFLEVETP+LQT+ GGA+ARPF HSNALDID YLRIAPELFLKRC+VGG D+ Sbjct 190 RCALERRGFLEVETPILQTIQGGASARPFIAHSNALDIDFYLRIAPELFLKRCLVGGLDR 249 Query 249 VFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLP 308 VFE+NR FRNEG D+THSPEF+MLE Y+ YGTYD A +TREL+QEVA G+ +L L Sbjct 250 VFEINRNFRNEGIDATHSPEFTMLEAYEAYGTYDTVAALTRELVQEVAHAVFGSTELVLA 309 Query 309 DGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGH 368 DGSVYD+ G+WA ++MYPSLS ALG E+ PQT V RLR +A GL ++ GH Sbjct 310 DGSVYDVGGDWAVLEMYPSLSDALGTEVDPQTRVGRLRELALKAGLAEEKI----NSLGH 365 Query 369 GKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYS 428 GKL+EELWE VG L APTFV+ FP +T+PLTRQHRSI GV EKWDLY+RG ELATGYS Sbjct 366 GKLVEELWEHLVGDHLRAPTFVRHFPAETSPLTRQHRSIDGVVEKWDLYVRGFELATGYS 425 Query 429 ELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTG 488 EL DPVVQRERF QA ++GD EAM LDEDFLAA+E+GMPP G G+G+DRL+ + TG Sbjct 426 ELVDPVVQRERFQAQALLRSSGDGEAMPLDEDFLAAMEHGMPPAGGLGLGVDRLMTAFTG 485 Query 489 LSIRETVLFPIVRPHSN 505 L IR+TVLFPI RP+S+ Sbjct 486 LGIRDTVLFPITRPNSS 502 >gi|334338089|ref|YP_004543241.1| Lysyl-tRNA synthetase [Isoptericola variabilis 225] gi|334108457|gb|AEG45347.1| Lysyl-tRNA synthetase [Isoptericola variabilis 225] Length=511 Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/498 (66%), Positives = 394/498 (80%), Gaps = 5/498 (1%) Query 5 DTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGV 64 + +DLPEQ R+RR+KR RLLA+G +PYPV+VP THT+A+VR + L T+D+ GV Sbjct 17 NAVDDLPEQLRVRREKRERLLARGVEPYPVSVPVTHTIAQVREGYGHLAAGEETDDVAGV 76 Query 65 AGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVI 124 AGRV+F RN+GKLCF TLQDG+G +LQ M+S VG+ +L +KADVDLGD ++VHG + Sbjct 77 AGRVVFLRNTGKLCFVTLQDGEGNRLQAMLSQAVVGEESLSDFKADVDLGDHLFVHGRIG 136 Query 125 SSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAV 184 +SRRGELS+ AD W++AAK+LRPLPV HK++SEE+RVRQRYVDLI RP AR + RLR V Sbjct 137 ASRRGELSIFADAWQMAAKALRPLPVLHKDLSEEARVRQRYVDLIARPAAREMVRLRSGV 196 Query 185 VRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVG 244 VR++R RRGFLE+ETP+LQT+A GAAARPF+TH NA DIDL+LRIAPELFLK+ +VG Sbjct 197 VRSLRDNFHRRGFLEIETPMLQTVASGAAARPFSTHMNAYDIDLFLRIAPELFLKKAVVG 256 Query 245 GFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQ 304 G +KVFE+NR FRNEGADSTHSPEF+MLE Y+ YG Y+ +T++L+Q A E +GT Sbjct 257 GVEKVFEINRNFRNEGADSTHSPEFAMLEAYEAYGDYNSIGALTQDLVQTAAKEVLGTTV 316 Query 305 LPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNR 364 + LPDG YD+ GEWA I MY SLS ALGEEITP T+V+ L +A+ L DP + Sbjct 317 VTLPDGEEYDLGGEWAQITMYGSLSEALGEEITPDTSVEHLLSLAEKAELSLDP-----K 371 Query 365 GFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELA 424 HGKL+EELWE VG +L APTFV+DFPV+T+PL R HRSIPGV EKWDLY+RG ELA Sbjct 372 KANHGKLVEELWEHHVGDTLHAPTFVRDFPVETSPLVRAHRSIPGVVEKWDLYVRGFELA 431 Query 425 TGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLM 484 TGYSEL DPVVQRERFA QAR AAAGDDEAM LDEDFL A+E+ MPP G GMGIDRLLM Sbjct 432 TGYSELVDPVVQRERFAAQARLAAAGDDEAMALDEDFLVAMEHAMPPSGGMGMGIDRLLM 491 Query 485 SLTGLSIRETVLFPIVRP 502 +LTGL IRET+LFP+V+P Sbjct 492 ALTGLGIRETILFPLVKP 509 >gi|213965141|ref|ZP_03393339.1| lysyl-tRNA synthetase [Corynebacterium amycolatum SK46] gi|213952255|gb|EEB63639.1| lysyl-tRNA synthetase [Corynebacterium amycolatum SK46] Length=510 Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/501 (65%), Positives = 389/501 (78%), Gaps = 10/501 (1%) Query 10 LPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGRVI 69 +PEQ RIRR+KR RLL G PYPV VPRTH+L +VR L T+D+V V GRV+ Sbjct 14 VPEQLRIRREKRDRLLEAGIQPYPVEVPRTHSLKDVREEWGHLEAGEETQDVVTVIGRVM 73 Query 70 FARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRRG 129 F RN+GKLCFA LQ+GDGT LQ M+S +VG+ AL AWKADVD+GD V + G VISSRRG Sbjct 74 FIRNTGKLCFAALQEGDGTTLQAMLSKAEVGEDALAAWKADVDMGDFVLITGRVISSRRG 133 Query 130 ELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAIR 189 ELSV+A W++A+K+LRPLPV+ ++SE+SRVR RY DLI+R +AR A RI V+R +R Sbjct 134 ELSVMATEWQMASKALRPLPVSFADLSEDSRVRHRYTDLIMREQARTNALTRIKVIRELR 193 Query 190 TALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVGGFDKV 249 AL+RRGFLEVETP+LQTL GGAAARPF THSNALDIDLYLRIAPEL+LKRC+VGG ++V Sbjct 194 HALERRGFLEVETPMLQTLHGGAAARPFVTHSNALDIDLYLRIAPELYLKRCVVGGMERV 253 Query 250 FELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLPD 309 FE+NR FRNEG DS+HSPEF+MLE Y+ +GTYDDSA RE+IQE+ G+ + L D Sbjct 254 FEINRNFRNEGIDSSHSPEFAMLEYYEAFGTYDDSARTVREVIQEICVAVFGSTTVTLAD 313 Query 310 GSVYDIDGEWATIQMYPSLSVALGE------EITPQTTVDRLRGIADSLGLEKDPAIHDN 363 G+ +D GEW I+MYPSL+ AL E+T +TV+ L+ IAD +GLE + + Sbjct 314 GTEFDFGGEWKQIEMYPSLNEALARKFPGQPEVTIDSTVEELKAIADVIGLE----VPEK 369 Query 364 RGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIEL 423 G+GHGKL+EE+WE L P FV+DFPV+T+PLTRQHRS PGVTEKWDLY+RG EL Sbjct 370 GGWGHGKLVEEIWELLCEDQLDGPVFVRDFPVETSPLTRQHRSKPGVTEKWDLYVRGFEL 429 Query 424 ATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLL 483 ATGYSEL DPVVQRERF DQAR AA GDDEAMVLDEDFL A+E GMPP TG GMGIDRLL Sbjct 430 ATGYSELVDPVVQRERFEDQARLAAGGDDEAMVLDEDFLHAMEQGMPPTTGVGMGIDRLL 489 Query 484 MSLTGLSIRETVLFPIVRPHS 504 M+LTGL IRETVLFPIV+P + Sbjct 490 MALTGLGIRETVLFPIVKPEA 510 >gi|317507814|ref|ZP_07965515.1| lysyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974] gi|316253856|gb|EFV13225.1| lysyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974] Length=501 Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/496 (66%), Positives = 398/496 (81%), Gaps = 4/496 (0%) Query 9 DLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGRV 68 DLPEQ RIRR+KR R+LA+G +PYPV + THTLA++R +L +T +V VAGRV Sbjct 10 DLPEQLRIRREKRDRVLARGDEPYPVELAVTHTLAQIREQFAELESGASTGVVVAVAGRV 69 Query 69 IFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSRR 128 IF R++GKL FATLQ GDG++LQ MISL+ +G+ AL WKADVDLGDIV+V G VISS+R Sbjct 70 IFQRDAGKLLFATLQAGDGSRLQAMISLNGIGEEALARWKADVDLGDIVFVRGEVISSKR 129 Query 129 GELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRAI 188 GELSV+A W+ AAK+LRPLPVAHKE+SEE+RVRQRY+DLI+RPEARA+AR R+AV+R + Sbjct 130 GELSVMAQSWQFAAKALRPLPVAHKELSEETRVRQRYLDLIMRPEARAMARTRVAVLREL 189 Query 189 RTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVGGFDK 248 R AL RRGFLEVETP+LQT+ GGA+ARPF THSNALDID YLRIAPELFLKRC+VGG ++ Sbjct 190 REALGRRGFLEVETPILQTIQGGASARPFVTHSNALDIDFYLRIAPELFLKRCLVGGLER 249 Query 249 VFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPLP 308 VFE+NR FRNEG D+THSPEF+MLE Y+ YGTYD AV+TRE++QEVA A G+ ++ L Sbjct 250 VFEINRNFRNEGIDATHSPEFTMLEAYEAYGTYDTMAVLTREVVQEVARGAFGSTEVVLA 309 Query 309 DGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGH 368 DGS YD+ G WA ++MYPSLS A+G +TP+T V LR +A GL ++ + FG Sbjct 310 DGSTYDVGGNWAVLEMYPSLSDAVGVPVTPETEVGELRELAVKAGLPEEKI----KSFGP 365 Query 369 GKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYS 428 GK++EELWE +G L PTFV+ FP +T+PLTRQHRSI GVTEKWDLY+RG ELATGYS Sbjct 366 GKIVEELWEHLIGDHLREPTFVRHFPAETSPLTRQHRSIAGVTEKWDLYVRGFELATGYS 425 Query 429 ELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTG 488 EL DPVVQRERF QA +AGD EAM LDEDFLAA+E+GMPP G G+G+DRLL + TG Sbjct 426 ELVDPVVQRERFQAQALLRSAGDGEAMPLDEDFLAAMEHGMPPAGGIGLGVDRLLTAFTG 485 Query 489 LSIRETVLFPIVRPHS 504 L IR+TVLFP+ RP++ Sbjct 486 LGIRDTVLFPVTRPNA 501 >gi|269796472|ref|YP_003315927.1| lysyl-tRNA synthetase (class II) [Sanguibacter keddieii DSM 10542] gi|269098657|gb|ACZ23093.1| lysyl-tRNA synthetase (class II) [Sanguibacter keddieii DSM 10542] Length=510 Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/500 (66%), Positives = 393/500 (79%), Gaps = 5/500 (1%) Query 4 ADTAEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVG 63 AD DLPEQ R+RR+KR RLL G + YPV VPRTH++AEVRA + L T+D+VG Sbjct 15 ADGENDLPEQLRVRREKRDRLLESGVEAYPVEVPRTHSIAEVRAQYAHLETGEETDDLVG 74 Query 64 VAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAV 123 VAGRV+F RNSGKLCF +LQDG+G +LQ+M+SL VG+ +L A+KADVDLGD ++ HG V Sbjct 75 VAGRVVFLRNSGKLCFVSLQDGEGNRLQIMLSLAVVGEESLAAFKADVDLGDHLFAHGRV 134 Query 124 ISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIA 183 SSRRGELSV AD W+IAAK+LRPLPV H+E+SEE+RVRQRYVDLI RP AR ARLR Sbjct 135 GSSRRGELSVFADSWQIAAKALRPLPVLHRELSEEARVRQRYVDLIARPAAREAARLRAG 194 Query 184 VVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIV 243 VVR++R RG++E+ETP+LQT+ GGAAARPF TH NA DIDL+LRIAPELFLKR +V Sbjct 195 VVRSLRENFHDRGYMEIETPMLQTIHGGAAARPFTTHMNAFDIDLFLRIAPELFLKRAVV 254 Query 244 GGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTR 303 GG ++VFE+NR FRNEGADSTHSPEF+MLE Y+ YG Y+ AV+T+ L+Q+ A + GT Sbjct 255 GGIERVFEINRNFRNEGADSTHSPEFAMLEAYEAYGDYNSMAVLTKNLVQKAALDMFGTT 314 Query 304 QLPLPDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDN 363 + L G Y++ G+WA + MY SLS ALGEEITPQTTV RL +AD++ + DP Sbjct 315 LVTLASGEEYELGGDWAELTMYGSLSEALGEEITPQTTVARLTELADAVEISIDP----- 369 Query 364 RGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIEL 423 + HGKL+EELWE VG SL APTFV+DFPV+T+PLTR HRS+PG EKWDLY+RG EL Sbjct 370 KKVNHGKLVEELWEHHVGNSLYAPTFVRDFPVETSPLTRDHRSVPGQVEKWDLYVRGFEL 429 Query 424 ATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLL 483 AT YSEL DPVVQR+RF QA AAAGDDEAMVLDEDFL A+EY MPP G GMG+DRLL Sbjct 430 ATAYSELVDPVVQRQRFEAQAVLAAAGDDEAMVLDEDFLTAMEYAMPPSGGMGMGLDRLL 489 Query 484 MSLTGLSIRETVLFPIVRPH 503 M+LTGL IRET+LFP+V+P Sbjct 490 MALTGLGIRETILFPLVKPQ 509 >gi|172041369|ref|YP_001801083.1| lysyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109] gi|171852673|emb|CAQ05649.1| lysyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109] Length=515 Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/519 (64%), Positives = 395/519 (77%), Gaps = 32/519 (6%) Query 14 FRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVR------------------AAHPD---- 51 R+RR+KR R+L +GR YPV VPRTH+LAEVR AA P+ Sbjct 1 MRVRREKRERILDEGRQAYPVEVPRTHSLAEVRQQWAVKPKEDDPEAAEKLAALPEGATL 60 Query 52 LPIDTATEDIVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADV 111 L + T+ +VGVAGRV+F RN+GKL FATLQDGDGTQLQVM+S ++G ALD WKA+V Sbjct 61 LDVGEETDSVVGVAGRVMFVRNTGKLAFATLQDGDGTQLQVMLSQAEIGAEALDRWKAEV 120 Query 112 DLGDIVYVHGAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVR 171 DLGDIV+ G VISSRRGELSV+A W +AAK+LRPLPVAHKEMSE++RVR RY DLI+R Sbjct 121 DLGDIVFAKGRVISSRRGELSVMAQEWTMAAKALRPLPVAHKEMSEDARVRHRYTDLIMR 180 Query 172 PEARAVARLRIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLR 231 EAR A RI V+RA+R AL+RRGF E+ETP+LQTL GGAAARPF THSNALDIDLYLR Sbjct 181 EEARKNAMTRIKVMRALRHALERRGFNELETPMLQTLHGGAAARPFVTHSNALDIDLYLR 240 Query 232 IAPELFLKRCIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTREL 291 IAPEL+LKR +VGG D+VFE+NR FRNEG D +HSPEF+MLETYQ YG Y+ +A +TRE+ Sbjct 241 IAPELYLKRAVVGGLDRVFEINRNFRNEGIDRSHSPEFAMLETYQAYGDYNTAATMTREV 300 Query 292 IQEVADEAIGTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGE------EITPQTTVDRL 345 IQEVA+E GT +L + DG+ YD+ GEW I++YPSL+ AL E E+T +TV+ L Sbjct 301 IQEVAEEVFGTTKLTMHDGTEYDLGGEWPVIEVYPSLNKALAEKFPDQPEVTVDSTVEEL 360 Query 346 RGIADSLGLEKDPAIHDNRGFGHGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHR 405 + +A +GLE + + G+GHGKL+EE+WE L P FV ++PV+T+PL RQHR Sbjct 361 KALAKVIGLE----VPKDGGWGHGKLVEEIWEFLCEDQLWGPVFVYNYPVETSPLVRQHR 416 Query 406 SIPGVTEKWDLYLRGIELATGYSELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAAL 465 + GVTEKWDLYLRG ELATGYSEL DPV+QRERF DQAR AA GDDEAMVLDEDFL A+ Sbjct 417 TERGVTEKWDLYLRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMVLDEDFLQAM 476 Query 466 EYGMPPCTGTGMGIDRLLMSLTGLSIRETVLFPIVRPHS 504 E GMPP GTGMG+DRLLM+ TGL IRETVLFP+V+P Sbjct 477 EQGMPPTAGTGMGLDRLLMAFTGLGIRETVLFPLVKPEK 515 >gi|269957752|ref|YP_003327541.1| lysyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] gi|269306433|gb|ACZ31983.1| lysyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] Length=504 Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/497 (64%), Positives = 387/497 (78%), Gaps = 5/497 (1%) Query 8 EDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATEDIVGVAGR 67 +DLPEQ RIRR+KR RL+AQG + YPV VP THT+A+VRA + L T+D+ GVAGR Sbjct 13 DDLPEQLRIRREKRERLIAQGGEAYPVTVPVTHTIAQVRAGYGHLEAGQETDDVAGVAGR 72 Query 68 VIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQAALDAWKADVDLGDIVYVHGAVISSR 127 V+F RN+GKLCF TLQDG G +LQ M+SL VG+ AL A+K+DVDLGD ++VHG + +SR Sbjct 73 VVFLRNTGKLCFVTLQDGAGNRLQAMLSLAVVGEEALAAFKSDVDLGDHLFVHGRIGASR 132 Query 128 RGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVRQRYVDLIVRPEARAVARLRIAVVRA 187 RGELSV AD WR+AAKSLRPLPV HK++SEESRVRQRYVDLI RP AR + RLR VVR+ Sbjct 133 RGELSVFADEWRLAAKSLRPLPVLHKDLSEESRVRQRYVDLIARPAARDMVRLRADVVRS 192 Query 188 IRTALQRRGFLEVETPVLQTLAGGAAARPFATHSNALDIDLYLRIAPELFLKRCIVGGFD 247 +R RR F+EVETP+LQT+A GA ARPF TH NA D++L++RIAPELFLKR +VGG + Sbjct 193 LRENFHRRDFIEVETPMLQTIASGATARPFTTHMNAYDMELFMRIAPELFLKRAVVGGVE 252 Query 248 KVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYDDSAVVTRELIQEVADEAIGTRQLPL 307 +VFE+NR FRNEGADSTHSPEF+MLE Y+ YG Y+ +T+ L+Q A E +GT + L Sbjct 253 RVFEINRNFRNEGADSTHSPEFAMLEAYEAYGDYNTIGALTQNLVQTAAQEVLGTTVITL 312 Query 308 PDGSVYDIDGEWATIQMYPSLSVALGEEITPQTTVDRLRGIADSLGLEKDPAIHDNRGFG 367 PDG YD+ G+WA + MY SLS +LGEEITP+T+V+ L I L LE +++ Sbjct 313 PDGEEYDLGGQWAQLTMYGSLSQSLGEEITPETSVEDLLKIGRRLDLEL-----EHKAVN 367 Query 368 HGKLIEELWERTVGKSLSAPTFVKDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGY 427 HGKL+E LWE VG L+APTFV+DFPV+T+PL R HR +PG EKWDLY+RG ELATGY Sbjct 368 HGKLVETLWEHCVGDHLTAPTFVRDFPVETSPLVRAHREVPGQVEKWDLYVRGFELATGY 427 Query 428 SELSDPVVQRERFADQARAAAAGDDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLT 487 SEL DPV+QRERF QA AAAGDDEAM +DEDFL A+E+ MPP G GMG+DRLLM+LT Sbjct 428 SELVDPVIQRERFEAQALLAAAGDDEAMRIDEDFLVAMEHAMPPTGGMGMGLDRLLMALT 487 Query 488 GLSIRETVLFPIVRPHS 504 GL IRET+LFP+V+P++ Sbjct 488 GLGIRETILFPLVKPNA 504 >gi|260578417|ref|ZP_05846331.1| lysine--tRNA ligase [Corynebacterium jeikeium ATCC 43734] gi|258603439|gb|EEW16702.1| lysine--tRNA ligase [Corynebacterium jeikeium ATCC 43734] Length=535 Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/533 (63%), Positives = 398/533 (75%), Gaps = 36/533 (6%) Query 3 AADT-AEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHP---------DL 52 AA+T A+DLPEQ RIRR+KR R+L G+D YPV VPRTH+LAEVRA + Sbjct 4 AANTPAQDLPEQLRIRREKRQRILESGKDAYPVEVPRTHSLAEVRAKWAVKKTDGEAEEQ 63 Query 53 PIDTA----------TEDIVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQA 102 P++ T+D+V V GR+IF RN+GKLCFATLQDGDGTQLQ M+SL +VG+ Sbjct 64 PVEAEGVTYLAAGDETQDVVSVTGRLIFMRNTGKLCFATLQDGDGTQLQAMLSLAEVGED 123 Query 103 ALDAWKADVDLGDIVYVHGAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVR 162 AL AWKADVDLGD + V G VI+SRRGELSV+A W +AAK+LRPLPVA EM+EE+RVR Sbjct 124 ALAAWKADVDLGDFIGVTGRVIASRRGELSVMASEWVMAAKALRPLPVAFAEMNEETRVR 183 Query 163 QRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSN 222 QRY DLIVR EAR A R+ V+RA+R ++ GF+E+ETP+LQTL GGAAARPF THSN Sbjct 184 QRYNDLIVREEARKNAMTRVKVIRALRDYMEGEGFVEIETPMLQTLHGGAAARPFVTHSN 243 Query 223 ALDIDLYLRIAPELFLKRCIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYD 282 ALDIDLYLRIAPELFLKR +VGG D+VFE+NR FRNEG D +HSPEF+MLETY +G YD Sbjct 244 ALDIDLYLRIAPELFLKRAVVGGIDRVFEINRNFRNEGVDKSHSPEFAMLETYAAWGDYD 303 Query 283 DSAVVTRELIQEVADEAI------GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGE-- 334 D A TRE IQ + D+ GT ++ L DG+ +D GEW I+MYPSL+ AL Sbjct 304 DCARTTRESIQYIVDQLTKGTDLEGTGKVRLADGTEFDFGGEWKEIEMYPSLNEALARKY 363 Query 335 ----EITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGHGKLIEELWERTVGKSLSAPTFV 390 E+T +TV+ L+ IA +GL+ + G+GHGKL+EE+WE L P FV Sbjct 364 PGQPEVTIDSTVEELQKIAKVIGLD----VPAKGGWGHGKLVEEIWEVLCEDQLEGPIFV 419 Query 391 KDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYSELSDPVVQRERFADQARAAAAG 450 ++FPV+T+PLTRQHRS PGVTEKWDLY+RG ELATGYSEL DPV+QRERF DQAR AA G Sbjct 420 RNFPVETSPLTRQHRSKPGVTEKWDLYVRGFELATGYSELVDPVIQRERFEDQARLAANG 479 Query 451 DDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTGLSIRETVLFPIVRPH 503 DDEAM LDEDFLAA+E GMPP GTGMGIDRLLM+LTGL IRETVLFPIV+P Sbjct 480 DDEAMRLDEDFLAAMEQGMPPTAGTGMGIDRLLMALTGLGIRETVLFPIVKPE 532 >gi|68535359|ref|YP_250064.1| lysyl-tRNA synthetase [Corynebacterium jeikeium K411] gi|68262958|emb|CAI36446.1| lysyl-tRNA synthetase [Corynebacterium jeikeium K411] Length=551 Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/535 (63%), Positives = 396/535 (75%), Gaps = 36/535 (6%) Query 3 AADT-AEDLPEQFRIRRDKRARLLAQGRDPYPVAVPRTHTLAEVRAAHPDLPIDTATE-- 59 AA+T A+DLPEQ RIRR+KR R+L G+D YPV VPRTH+LAEVRA D TE Sbjct 20 AANTPAQDLPEQLRIRREKRQRILESGKDAYPVEVPRTHSLAEVRAKWAVKKTDGETEEQ 79 Query 60 -----------------DIVGVAGRVIFARNSGKLCFATLQDGDGTQLQVMISLDKVGQA 102 D+V V GR+IF RN+GKLCFATLQDGDGTQLQ M+SL +VG+ Sbjct 80 PVEAEGVTYLAAGDETQDVVSVTGRLIFMRNTGKLCFATLQDGDGTQLQAMLSLAEVGED 139 Query 103 ALDAWKADVDLGDIVYVHGAVISSRRGELSVLADCWRIAAKSLRPLPVAHKEMSEESRVR 162 AL AWKADVDLGD + V G VI+SRRGELSV+A W +AAK+LRPLPVA EM+EE+RVR Sbjct 140 ALAAWKADVDLGDFIGVTGRVIASRRGELSVMASEWVMAAKALRPLPVAFAEMNEETRVR 199 Query 163 QRYVDLIVRPEARAVARLRIAVVRAIRTALQRRGFLEVETPVLQTLAGGAAARPFATHSN 222 QRY DLIVR EAR A R+ V+RA+R ++ GF+E+ETP+LQTL GGAAARPF THSN Sbjct 200 QRYNDLIVREEARKNAMTRVKVIRALRDYMEGEGFVEIETPMLQTLHGGAAARPFVTHSN 259 Query 223 ALDIDLYLRIAPELFLKRCIVGGFDKVFELNRVFRNEGADSTHSPEFSMLETYQTYGTYD 282 ALDIDLYLRIAPELFLKR +VGG D+VFE+NR FRNEG D +HSPEF+MLETY +G YD Sbjct 260 ALDIDLYLRIAPELFLKRAVVGGIDRVFEINRNFRNEGVDKSHSPEFAMLETYAAWGDYD 319 Query 283 DSAVVTRELIQEVADEAI------GTRQLPLPDGSVYDIDGEWATIQMYPSLSVALGE-- 334 D A TRE IQ + D+ GT ++ L DG+ +D GEW I+MYPSL+ AL Sbjct 320 DCARTTRESIQYIVDQLTKGTDLEGTGKVRLADGTEFDFGGEWKEIEMYPSLNEALARKY 379 Query 335 ----EITPQTTVDRLRGIADSLGLEKDPAIHDNRGFGHGKLIEELWERTVGKSLSAPTFV 390 E+T +TV+ L+ IA +GL+ + G+GHGKL+EE+WE L P FV Sbjct 380 PGQPEVTIDSTVEELKEIAKVIGLD----VPAKGGWGHGKLVEEIWEVLCEDQLEGPIFV 435 Query 391 KDFPVQTTPLTRQHRSIPGVTEKWDLYLRGIELATGYSELSDPVVQRERFADQARAAAAG 450 ++FPV+T+PLTRQHRS PGVTEKWDLY+RG ELATGYSEL DPV+QRERF DQAR AA G Sbjct 436 RNFPVETSPLTRQHRSKPGVTEKWDLYVRGFELATGYSELIDPVIQRERFEDQARLAANG 495 Query 451 DDEAMVLDEDFLAALEYGMPPCTGTGMGIDRLLMSLTGLSIRETVLFPIVRPHSN 505 DDEAM LDEDFLAA+E GMPP GTGMGIDRLLM+LTGL IRETVLFPIV+P + Sbjct 496 DDEAMRLDEDFLAAMEQGMPPTAGTGMGIDRLLMALTGLGIRETVLFPIVKPERD 550 Lambda K H 0.320 0.136 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1092677542156 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40