BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3604c
Length=397
Score E
Sequences producing significant alignments: (Bits) Value
gi|57117132|ref|NP_218121.2| transmembrane protein [Mycobacteriu... 767 0.0
gi|289748118|ref|ZP_06507496.1| conserved alanine, arginine and ... 766 0.0
gi|31794780|ref|NP_857273.1| transmembrane protein [Mycobacteriu... 764 0.0
gi|15843216|ref|NP_338253.1| hypothetical protein MT3709 [Mycoba... 764 0.0
gi|340628569|ref|YP_004747021.1| hypothetical protein MCAN_36161... 750 0.0
gi|297733273|ref|ZP_06962391.1| hypothetical protein MtubKR_1937... 728 0.0
gi|254366158|ref|ZP_04982202.1| conserved transmembrane protein ... 679 0.0
gi|289555866|ref|ZP_06445076.1| conserved alanine, arginine and ... 639 0.0
gi|298527082|ref|ZP_07014491.1| conserved transmembrane protein ... 506 2e-141
gi|289571843|ref|ZP_06452070.1| conserved alanine, arginine and ... 477 1e-132
gi|289445198|ref|ZP_06434942.1| conserved alanine, arginine and ... 477 1e-132
gi|289763782|ref|ZP_06523160.1| conserved transmembrane protein ... 393 3e-107
gi|15827025|ref|NP_301288.1| hypothetical protein ML0228 [Mycoba... 328 7e-88
gi|41406552|ref|NP_959388.1| hypothetical protein MAP0454 [Mycob... 287 2e-75
gi|336458524|gb|EGO37495.1| hypothetical protein MAPs_12340 [Myc... 286 3e-75
gi|342862045|ref|ZP_08718689.1| hypothetical protein MCOL_24260 ... 286 5e-75
gi|254773207|ref|ZP_05214723.1| hypothetical protein MaviaA2_007... 284 2e-74
gi|118619360|ref|YP_907692.1| transmembrane protein rich in alan... 271 2e-70
gi|183985075|ref|YP_001853366.1| transmembrane protein rich in a... 270 3e-70
gi|240172847|ref|ZP_04751506.1| transmembrane protein rich in al... 270 5e-70
gi|118464078|ref|YP_879829.1| hypothetical protein MAV_0549 [Myc... 262 8e-68
gi|254822687|ref|ZP_05227688.1| hypothetical protein MintA_22349... 251 1e-64
gi|296166670|ref|ZP_06849095.1| conserved hypothetical protein [... 243 4e-62
gi|108801727|ref|YP_641924.1| hypothetical protein Mmcs_4764 [My... 215 1e-53
gi|126437714|ref|YP_001073405.1| hypothetical protein Mjls_5150 ... 215 1e-53
gi|315446246|ref|YP_004079125.1| hypothetical protein Mspyr1_474... 195 1e-47
gi|145222014|ref|YP_001132692.1| hypothetical protein Mflv_1422 ... 195 1e-47
gi|169627643|ref|YP_001701292.1| hypothetical protein MAB_0539 [... 193 4e-47
gi|120406314|ref|YP_956143.1| hypothetical protein Mvan_5366 [My... 183 4e-44
gi|118470986|ref|YP_890320.1| hypothetical protein MSMEG_6099 [M... 182 1e-43
gi|333992533|ref|YP_004525147.1| hypothetical protein JDM601_389... 164 3e-38
gi|111021385|ref|YP_704357.1| hypothetical protein RHA1_ro04413 ... 133 5e-29
gi|226363739|ref|YP_002781521.1| hypothetical protein ROP_43290 ... 132 8e-29
gi|312138058|ref|YP_004005394.1| integral membrane protein [Rhod... 125 8e-27
gi|226304120|ref|YP_002764078.1| hypothetical protein RER_06310 ... 118 2e-24
gi|325675041|ref|ZP_08154728.1| hypothetical protein HMPREF0724_... 118 2e-24
gi|333917995|ref|YP_004491576.1| hypothetical protein AS9A_0317 ... 117 5e-24
gi|229494569|ref|ZP_04388332.1| putative conserved transmembrane... 115 9e-24
gi|296392861|ref|YP_003657745.1| hypothetical protein Srot_0427 ... 115 2e-23
gi|302530782|ref|ZP_07283124.1| predicted protein [Streptomyces ... 112 1e-22
gi|343924372|ref|ZP_08763922.1| hypothetical protein GOALK_015_0... 108 2e-21
gi|300790545|ref|YP_003770836.1| hypothetical protein AMED_8741 ... 107 3e-21
gi|262203866|ref|YP_003275074.1| hypothetical protein Gbro_4011 ... 107 3e-21
gi|326384081|ref|ZP_08205764.1| hypothetical protein SCNU_14149 ... 107 4e-21
gi|296138301|ref|YP_003645544.1| hypothetical protein Tpau_0565 ... 96.3 8e-18
gi|54022368|ref|YP_116610.1| hypothetical protein nfa4040 [Nocar... 92.0 1e-16
gi|256374474|ref|YP_003098134.1| hypothetical protein Amir_0319 ... 90.9 3e-16
gi|340532232|gb|AEK47437.1| hypothetical protein RAM_44850 [Amyc... 90.9 3e-16
gi|317507810|ref|ZP_07965511.1| hypothetical protein HMPREF9336_... 84.3 3e-14
gi|237786209|ref|YP_002906914.1| hypothetical protein ckrop_1646... 84.3 3e-14
>gi|57117132|ref|NP_218121.2| transmembrane protein [Mycobacterium tuberculosis H37Rv]
gi|148663468|ref|YP_001284991.1| putative alanine, arginine and proline rich transmembrane protein
[Mycobacterium tuberculosis H37Ra]
gi|148824809|ref|YP_001289563.1| alanine, arginine and proline transmembrane protein [Mycobacterium
tuberculosis F11]
44 more sequence titles
gi|167968204|ref|ZP_02550481.1| conserved alanine, arginine and proline transmembrane protein
[Mycobacterium tuberculosis H37Ra]
gi|253800644|ref|YP_003033645.1| hypothetical protein TBMG_03642 [Mycobacterium tuberculosis KZN
1435]
gi|254233105|ref|ZP_04926431.1| hypothetical protein TBCG_03529 [Mycobacterium tuberculosis C]
gi|254552718|ref|ZP_05143165.1| hypothetical protein Mtube_20100 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|289441034|ref|ZP_06430778.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis T46]
gi|289572258|ref|ZP_06452485.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis K85]
gi|289747440|ref|ZP_06506818.1| hypothetical protein TBBG_00113 [Mycobacterium tuberculosis 02_1987]
gi|289755731|ref|ZP_06515109.1| transmembrane protein [Mycobacterium tuberculosis EAS054]
gi|289759763|ref|ZP_06519141.1| hypothetical protein TBEG_00092 [Mycobacterium tuberculosis T85]
gi|294993722|ref|ZP_06799413.1| hypothetical protein Mtub2_04226 [Mycobacterium tuberculosis
210]
gi|297636279|ref|ZP_06954059.1| hypothetical protein MtubK4_19235 [Mycobacterium tuberculosis
KZN 4207]
gi|306777958|ref|ZP_07416295.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis SUMu001]
gi|306778489|ref|ZP_07416826.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis SUMu002]
gi|306786511|ref|ZP_07424833.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis SUMu003]
gi|306801231|ref|ZP_07437899.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis SUMu008]
gi|306805445|ref|ZP_07442113.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis SUMu007]
gi|306969736|ref|ZP_07482397.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis SUMu009]
gi|307086401|ref|ZP_07495514.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis SUMu012]
gi|313660603|ref|ZP_07817483.1| hypothetical protein MtubKV_19365 [Mycobacterium tuberculosis
KZN V2475]
gi|339633603|ref|YP_004725245.1| hypothetical protein MAF_36170 [Mycobacterium africanum GM041182]
gi|41352813|emb|CAB08940.2| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN RICH IN ALANINE AND
ARGININE AND PROLINE [Mycobacterium tuberculosis H37Rv]
gi|124602898|gb|EAY61173.1| hypothetical protein TBCG_03529 [Mycobacterium tuberculosis C]
gi|148507620|gb|ABQ75429.1| putative conserved alanine, arginine and proline rich transmembrane
protein [Mycobacterium tuberculosis H37Ra]
gi|148723336|gb|ABR07961.1| conserved alanine, arginine and proline transmembrane protein
[Mycobacterium tuberculosis F11]
gi|253322147|gb|ACT26750.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis KZN 1435]
gi|289413953|gb|EFD11193.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis T46]
gi|289536689|gb|EFD41267.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis K85]
gi|289687968|gb|EFD55456.1| hypothetical protein TBBG_00113 [Mycobacterium tuberculosis 02_1987]
gi|289696318|gb|EFD63747.1| transmembrane protein [Mycobacterium tuberculosis EAS054]
gi|289715327|gb|EFD79339.1| hypothetical protein TBEG_00092 [Mycobacterium tuberculosis T85]
gi|308213730|gb|EFO73129.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis SUMu001]
gi|308328483|gb|EFP17334.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis SUMu002]
gi|308328898|gb|EFP17749.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis SUMu003]
gi|308348018|gb|EFP36869.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis SUMu007]
gi|308351959|gb|EFP40810.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis SUMu008]
gi|308352745|gb|EFP41596.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis SUMu009]
gi|308364167|gb|EFP53018.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis SUMu012]
gi|323717712|gb|EGB26912.1| hypothetical protein TMMG_00094 [Mycobacterium tuberculosis CDC1551A]
gi|326905442|gb|EGE52375.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis W-148]
gi|328460375|gb|AEB05798.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis KZN 4207]
gi|339296421|gb|AEJ48532.1| hypothetical protein CCDC5079_3343 [Mycobacterium tuberculosis
CCDC5079]
gi|339300023|gb|AEJ52133.1| hypothetical protein CCDC5180_3296 [Mycobacterium tuberculosis
CCDC5180]
gi|339332959|emb|CCC28686.1| putative conserved transmembrane protein rich in alanine and
arginine and proline [Mycobacterium africanum GM041182]
gi|344221437|gb|AEN02068.1| transmembrane protein [Mycobacterium tuberculosis CTRI-2]
Length=397
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/397 (100%), Positives = 397/397 (100%), Gaps = 0/397 (0%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA
Sbjct 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD
Sbjct 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA 180
EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA
Sbjct 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA 180
Query 181 VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER 240
VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER
Sbjct 181 VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER 240
Query 241 PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL 300
PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL
Sbjct 241 PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL 300
Query 301 AAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDS 360
AAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDS
Sbjct 301 AAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDS 360
Query 361 GGLHARDPLTGGQSVADLMARLQVESTGGGRRRRRGE 397
GGLHARDPLTGGQSVADLMARLQVESTGGGRRRRRGE
Sbjct 361 GGLHARDPLTGGQSVADLMARLQVESTGGGRRRRRGE 397
>gi|289748118|ref|ZP_06507496.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis T92]
gi|289688705|gb|EFD56134.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis T92]
Length=397
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/397 (99%), Positives = 397/397 (100%), Gaps = 0/397 (0%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA
Sbjct 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAA+
Sbjct 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAE 120
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA 180
EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA
Sbjct 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA 180
Query 181 VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER 240
VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER
Sbjct 181 VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER 240
Query 241 PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL 300
PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL
Sbjct 241 PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL 300
Query 301 AAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDS 360
AAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDS
Sbjct 301 AAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDS 360
Query 361 GGLHARDPLTGGQSVADLMARLQVESTGGGRRRRRGE 397
GGLHARDPLTGGQSVADLMARLQVESTGGGRRRRRGE
Sbjct 361 GGLHARDPLTGGQSVADLMARLQVESTGGGRRRRRGE 397
>gi|31794780|ref|NP_857273.1| transmembrane protein [Mycobacterium bovis AF2122/97]
gi|121639523|ref|YP_979747.1| putative transmembrane protein rich in alanine and arginine and
proline [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224992020|ref|YP_002646709.1| putative transmembrane protein rich in alanine and arginine and
proline [Mycobacterium bovis BCG str. Tokyo 172]
gi|31620377|emb|CAD95820.1| PROBABLE CONSERVED TRANSMEMBRANE PROTEIN RICH IN ALANINE AND
ARGININE AND PROLINE [Mycobacterium bovis AF2122/97]
gi|121495171|emb|CAL73657.1| Probable conserved transmembrane protein rich in alanine and
arginine and proline [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224775135|dbj|BAH27941.1| putative transmembrane protein rich in alanine and arginine and
proline [Mycobacterium bovis BCG str. Tokyo 172]
gi|341603544|emb|CCC66225.1| probable conserved transmembrane protein rich in alanine and
arginine and proline [Mycobacterium bovis BCG str. Moreau RDJ]
Length=397
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/397 (99%), Positives = 396/397 (99%), Gaps = 0/397 (0%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA
Sbjct 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD
Sbjct 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA 180
EVAALRAELAALRTSLEILFDADLEHRPALGT EKEARAARALDGESPPADWVSSDRVMA
Sbjct 121 EVAALRAELAALRTSLEILFDADLEHRPALGTGEKEARAARALDGESPPADWVSSDRVMA 180
Query 181 VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER 240
VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER
Sbjct 181 VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER 240
Query 241 PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL 300
PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL
Sbjct 241 PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL 300
Query 301 AAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDS 360
AAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDS
Sbjct 301 AAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDS 360
Query 361 GGLHARDPLTGGQSVADLMARLQVESTGGGRRRRRGE 397
GGLHARDPLTGGQSVADLMARLQVESTGGGRRRRRGE
Sbjct 361 GGLHARDPLTGGQSVADLMARLQVESTGGGRRRRRGE 397
>gi|15843216|ref|NP_338253.1| hypothetical protein MT3709 [Mycobacterium tuberculosis CDC1551]
gi|13883570|gb|AAK48067.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=397
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/397 (99%), Positives = 396/397 (99%), Gaps = 0/397 (0%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVLSRGARVRRGGRR GWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA
Sbjct 1 MTVLSRGARVRRGGRRRGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD
Sbjct 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA 180
EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA
Sbjct 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA 180
Query 181 VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER 240
VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER
Sbjct 181 VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER 240
Query 241 PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL 300
PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL
Sbjct 241 PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL 300
Query 301 AAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDS 360
AAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDS
Sbjct 301 AAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDS 360
Query 361 GGLHARDPLTGGQSVADLMARLQVESTGGGRRRRRGE 397
GGLHARDPLTGGQSVADLMARLQVESTGGGRRRRRGE
Sbjct 361 GGLHARDPLTGGQSVADLMARLQVESTGGGRRRRRGE 397
>gi|340628569|ref|YP_004747021.1| hypothetical protein MCAN_36161 [Mycobacterium canettii CIPT
140010059]
gi|340006759|emb|CCC45947.1| putative conserved transmembrane protein rich in alanine and
arginine and proline [Mycobacterium canettii CIPT 140010059]
Length=397
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/397 (99%), Positives = 391/397 (99%), Gaps = 0/397 (0%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA
Sbjct 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRA AAD
Sbjct 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAQAAD 120
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA 180
EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA
Sbjct 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA 180
Query 181 VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER 240
VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQE
Sbjct 181 VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQEP 240
Query 241 PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL 300
PVWQPVTSHGQWLPA TPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL
Sbjct 241 PVWQPVTSHGQWLPAGTPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL 300
Query 301 AAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDS 360
AAQYGESGRRSRHSAEHRDHD GGSGAGTGERPPSPPMAPPPPAEPT RHRTAD PPDDS
Sbjct 301 AAQYGESGRRSRHSAEHRDHDNGGSGAGTGERPPSPPMAPPPPAEPTPRHRTADAPPDDS 360
Query 361 GGLHARDPLTGGQSVADLMARLQVESTGGGRRRRRGE 397
GGLHARDPLTGGQSVADLMARLQVESTGGGRRRRRGE
Sbjct 361 GGLHARDPLTGGQSVADLMARLQVESTGGGRRRRRGE 397
>gi|297733273|ref|ZP_06962391.1| hypothetical protein MtubKR_19375 [Mycobacterium tuberculosis
KZN R506]
gi|308372594|ref|ZP_07429199.2| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis SUMu004]
gi|308372682|ref|ZP_07429502.2| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis SUMu005]
8 more sequence titles
Length=378
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/378 (99%), Positives = 378/378 (100%), Gaps = 0/378 (0%)
Query 20 VLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGAFVSVLYRRQSDVDQARVRD 79
+LLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGAFVSVLYRRQSDVDQARVRD
Sbjct 1 MLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGAFVSVLYRRQSDVDQARVRD 60
Query 80 LKLVYDLQLDREISARREYELTLESQLRRELASELRAPAADEVAALRAELAALRTSLEIL 139
LKLVYDLQLDREISARREYELTLESQLRRELASELRAPAADEVAALRAELAALRTSLEIL
Sbjct 61 LKLVYDLQLDREISARREYELTLESQLRRELASELRAPAADEVAALRAELAALRTSLEIL 120
Query 140 FDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMAVRGGDGASRTDEASIIDVP 199
FDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMAVRGGDGASRTDEASIIDVP
Sbjct 121 FDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMAVRGGDGASRTDEASIIDVP 180
Query 200 EVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQERPVWQPVTSHGQWLPAETPG 259
EVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQERPVWQPVTSHGQWLPAETPG
Sbjct 181 EVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQERPVWQPVTSHGQWLPAETPG 240
Query 260 SQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVELAAQYGESGRRSRHSAEHRD 319
SQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVELAAQYGESGRRSRHSAEHRD
Sbjct 241 SQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVELAAQYGESGRRSRHSAEHRD 300
Query 320 HDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDSGGLHARDPLTGGQSVADLM 379
HDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDSGGLHARDPLTGGQSVADLM
Sbjct 301 HDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDSGGLHARDPLTGGQSVADLM 360
Query 380 ARLQVESTGGGRRRRRGE 397
ARLQVESTGGGRRRRRGE
Sbjct 361 ARLQVESTGGGRRRRRGE 378
>gi|254366158|ref|ZP_04982202.1| conserved transmembrane protein rich in alanine and arginine
and proline [Mycobacterium tuberculosis str. Haarlem]
gi|134151670|gb|EBA43715.1| conserved transmembrane protein rich in alanine and arginine
and proline [Mycobacterium tuberculosis str. Haarlem]
Length=423
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/351 (99%), Positives = 351/351 (100%), Gaps = 0/351 (0%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA
Sbjct 66 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 125
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD
Sbjct 126 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 185
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA 180
EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA
Sbjct 186 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA 245
Query 181 VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER 240
VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER
Sbjct 246 VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER 305
Query 241 PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL 300
PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL
Sbjct 306 PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL 365
Query 301 AAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHR 351
AAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPPAEPTRRH+
Sbjct 366 AAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHK 416
>gi|289555866|ref|ZP_06445076.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis KZN 605]
gi|289440498|gb|EFD22991.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis KZN 605]
Length=330
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/330 (100%), Positives = 330/330 (100%), Gaps = 0/330 (0%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA
Sbjct 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD
Sbjct 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA 180
EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA
Sbjct 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA 180
Query 181 VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER 240
VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER
Sbjct 181 VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER 240
Query 241 PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL 300
PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL
Sbjct 241 PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL 300
Query 301 AAQYGESGRRSRHSAEHRDHDIGGSGAGTG 330
AAQYGESGRRSRHSAEHRDHDIGGSGAGTG
Sbjct 301 AAQYGESGRRSRHSAEHRDHDIGGSGAGTG 330
>gi|298527082|ref|ZP_07014491.1| conserved transmembrane protein [Mycobacterium tuberculosis 94_M4241A]
gi|298496876|gb|EFI32170.1| conserved transmembrane protein [Mycobacterium tuberculosis 94_M4241A]
Length=259
Score = 506 bits (1304), Expect = 2e-141, Method: Compositional matrix adjust.
Identities = 258/259 (99%), Positives = 259/259 (100%), Gaps = 0/259 (0%)
Query 139 LFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMAVRGGDGASRTDEASIIDV 198
+FDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMAVRGGDGASRTDEASIIDV
Sbjct 1 MFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMAVRGGDGASRTDEASIIDV 60
Query 199 PEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQERPVWQPVTSHGQWLPAETP 258
PEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQERPVWQPVTSHGQWLPAETP
Sbjct 61 PEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQERPVWQPVTSHGQWLPAETP 120
Query 259 GSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVELAAQYGESGRRSRHSAEHR 318
GSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVELAAQYGESGRRSRHSAEHR
Sbjct 121 GSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVELAAQYGESGRRSRHSAEHR 180
Query 319 DHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDSGGLHARDPLTGGQSVADL 378
DHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDSGGLHARDPLTGGQSVADL
Sbjct 181 DHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDSGGLHARDPLTGGQSVADL 240
Query 379 MARLQVESTGGGRRRRRGE 397
MARLQVESTGGGRRRRRGE
Sbjct 241 MARLQVESTGGGRRRRRGE 259
>gi|289571843|ref|ZP_06452070.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis T17]
gi|289545597|gb|EFD49245.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis T17]
Length=397
Score = 477 bits (1228), Expect = 1e-132, Method: Compositional matrix adjust.
Identities = 381/397 (96%), Positives = 387/397 (98%), Gaps = 0/397 (0%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA
Sbjct 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD
Sbjct 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA 180
EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA
Sbjct 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA 180
Query 181 VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER 240
VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER
Sbjct 181 VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER 240
Query 241 PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL 300
PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL
Sbjct 241 PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYNPPAYVEL 300
Query 301 AAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDS 360
AAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPP EPTR+HRTADTPPDDS
Sbjct 301 AAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPPGEPTRQHRTADTPPDDS 360
Query 361 GGLHARDPLTGGQSVADLMARLQVESTGGGRRRRRGE 397
GGLHA +P+T Q V++LM RL+VE TGGGR R R E
Sbjct 361 GGLHAPNPVTDVQYVSELMFRLEVEFTGGGRHRHRAE 397
>gi|289445198|ref|ZP_06434942.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis CPHL_A]
gi|289418156|gb|EFD15357.1| conserved alanine, arginine and proline rich membrane protein
[Mycobacterium tuberculosis CPHL_A]
Length=245
Score = 477 bits (1228), Expect = 1e-132, Method: Compositional matrix adjust.
Identities = 244/245 (99%), Positives = 245/245 (100%), Gaps = 0/245 (0%)
Query 153 VEKEARAARALDGESPPADWVSSDRVMAVRGGDGASRTDEASIIDVPEVGVPPVSGGPRH 212
+EKEARAARALDGESPPADWVSSDRVMAVRGGDGASRTDEASIIDVPEVGVPPVSGGPRH
Sbjct 1 MEKEARAARALDGESPPADWVSSDRVMAVRGGDGASRTDEASIIDVPEVGVPPVSGGPRH 60
Query 213 YEAPPPPQPEPLFEPRHRPPPLPPQQERPVWQPVTSHGQWLPAETPGSQWASVEPETTPA 272
YEAPPPPQPEPLFEPRHRPPPLPPQQERPVWQPVTSHGQWLPAETPGSQWASVEPETTPA
Sbjct 61 YEAPPPPQPEPLFEPRHRPPPLPPQQERPVWQPVTSHGQWLPAETPGSQWASVEPETTPA 120
Query 273 APPPGRRRRARHASPADQAYNPPAYVELAAQYGESGRRSRHSAEHRDHDIGGSGAGTGER 332
APPPGRRRRARHASPADQAYNPPAYVELAAQYGESGRRSRHSAEHRDHDIGGSGAGTGER
Sbjct 121 APPPGRRRRARHASPADQAYNPPAYVELAAQYGESGRRSRHSAEHRDHDIGGSGAGTGER 180
Query 333 PPSPPMAPPPPAEPTRRHRTADTPPDDSGGLHARDPLTGGQSVADLMARLQVESTGGGRR 392
PPSPPMAPPPPAEPTRRHRTADTPPDDSGGLHARDPLTGGQSVADLMARLQVESTGGGRR
Sbjct 181 PPSPPMAPPPPAEPTRRHRTADTPPDDSGGLHARDPLTGGQSVADLMARLQVESTGGGRR 240
Query 393 RRRGE 397
RRRGE
Sbjct 241 RRRGE 245
>gi|289763782|ref|ZP_06523160.1| conserved transmembrane protein rich in alanine and arginine
and proline [Mycobacterium tuberculosis GM 1503]
gi|289711288|gb|EFD75304.1| conserved transmembrane protein rich in alanine and arginine
and proline [Mycobacterium tuberculosis GM 1503]
Length=396
Score = 393 bits (1010), Expect = 3e-107, Method: Compositional matrix adjust.
Identities = 327/402 (82%), Positives = 333/402 (83%), Gaps = 31/402 (7%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA
Sbjct 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD
Sbjct 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA 180
EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA
Sbjct 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA 180
Query 181 VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER 240
VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER
Sbjct 181 VRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQER 240
Query 241 PVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASP----ADQAYNPPA 296
PVWQPVTSHGQWLPAETPG+Q ASVEPETTPA P P AR +P + A
Sbjct 241 PVWQPVTSHGQWLPAETPGNQCASVEPETTPAVPRP-----ARWVAPGLLLSRLGLQSAA 295
Query 297 YVELAAQYGES--GRRSRHSAEHRDHDIGGSGAGTGER---------PPSPPMAPPPPAE 345
YVELAAQY S GR R R + S A R P ++P
Sbjct 296 YVELAAQYVNSVAGRVIR-----RSNATMTSAAPVPRRVSVRRHLQWPRRRLLSPHAGNA 350
Query 346 PTRRHRTADTPPDDSGGLHARDPLTGGQSVADLMARLQVEST 387
P R R DDSGGLHARDPLTGGQSVADLMARLQVEST
Sbjct 351 PRTRRR------DDSGGLHARDPLTGGQSVADLMARLQVEST 386
>gi|15827025|ref|NP_301288.1| hypothetical protein ML0228 [Mycobacterium leprae TN]
gi|221229503|ref|YP_002502919.1| hypothetical protein MLBr_00228 [Mycobacterium leprae Br4923]
gi|3097219|emb|CAA18790.1| putative membrane protein [Mycobacterium leprae]
gi|13092572|emb|CAC29736.1| putative membrane protein [Mycobacterium leprae]
gi|219932610|emb|CAR70321.1| putative membrane protein [Mycobacterium leprae Br4923]
Length=432
Score = 328 bits (842), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 247/423 (59%), Positives = 281/423 (67%), Gaps = 40/423 (9%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVLSRG RVRRGGRRPGWVLLT L+LA+GASSALVFT+RVELLKLAV+LALWAAVAGA
Sbjct 1 MTVLSRGGRVRRGGRRPGWVLLTVSLILAMGASSALVFTNRVELLKLAVILALWAAVAGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSV YRRQSD DQ+RVR+LKLVYDLQLDREISARREYELT+ESQLRRELASELR+ AAD
Sbjct 61 FVSVFYRRQSDADQSRVRNLKLVYDLQLDREISARREYELTVESQLRRELASELRSQAAD 120
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEK-EARAA--------RALDGESPPAD 171
EV ALRAELAALRT+LEILFD DL+HRPAL E +A+AA DG+S P D
Sbjct 121 EVLALRAELAALRTNLEILFDTDLQHRPALAGAEAPQAKAAPPTCAYSNWVRDGQSKPVD 180
Query 172 WVSSDRVMAVRGGDGASRTDEASIIDVPEV------GVPPVSGGPRHYEAPPPPQPEPLF 225
WV S+RV +VR + D+ SIIDVPE G P GG + PP Q + F
Sbjct 181 WVPSNRVTSVRQDRVTNSADDTSIIDVPEEPLLPPRGQAPQQGGVLPHFEDPPSQSDSRF 240
Query 226 EPRHRPPPLPPQQE-----RPVWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRR 280
EPRHRPP P QE WQP + QWLP T S W VE + A P GRRR
Sbjct 241 EPRHRPPRSAPLQELLQPHMKDWQPDAADEQWLPPGTQDSAWTDVESASASVAAPSGRRR 300
Query 281 RARHASPADQAYNPPAYVELAAQYGESGR--RSRHSAEHRDHDIGGSGAGTGERP---PS 335
R+RH+S + A + P E A Q+ SGR RSRHSAE+R + I G A G P P+
Sbjct 301 RSRHSSLDEAAASSPGEAETAQQHSGSGRRARSRHSAEYRAYSIEGITA-KGSTPISQPT 359
Query 336 PP-----------MAPPPPAEPTRRHRTADTPPDDSGGLHARDPLTGGQSVADLMARLQV 384
PP + P P++P RHR+AD D G+ RD GGQSVADLMARL
Sbjct 360 PPAGPAFAEQPPRLVPASPSDPVPRHRSADLLTD---GVKGRDLAAGGQSVADLMARLGA 416
Query 385 EST 387
EST
Sbjct 417 EST 419
>gi|41406552|ref|NP_959388.1| hypothetical protein MAP0454 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394901|gb|AAS02771.1| hypothetical protein MAP_0454 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=462
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 251/461 (55%), Positives = 282/461 (62%), Gaps = 87/461 (18%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVLSRGARVRRGGRRPGWVLLTALLVLA+GASSALVFT+RVELLKLAV+LALWAAVAGA
Sbjct 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAMGASSALVFTNRVELLKLAVILALWAAVAGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSVLYRRQSD DQ+RVRDLKLVYDLQLDREISARREYELT+ESQLRRELASELRA AAD
Sbjct 61 FVSVLYRRQSDADQSRVRDLKLVYDLQLDREISARREYELTVESQLRRELASELRAQAAD 120
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARAL-----DGESP---PADW 172
++A LRAEL+ALRTSLEILFD DL RPALG E E + RA +GE+P P DW
Sbjct 121 DLAELRAELSALRTSLEILFDTDLGQRPALGAFEGEPQPERAYSEWERNGENPRDTPVDW 180
Query 173 VSSDRVMAVRGGDGASRTDEASIIDVPEV-GVPPVSGGPR-------HYEAPPPPQPEPL 224
V SDRV + R DE +IIDVPE +PP P Y+ PP P EP
Sbjct 181 VPSDRVTSAPQEHPPGRHDETAIIDVPEEPLMPPRPQQPAPLRRERPRYQEPPGPT-EPR 239
Query 225 FEPRHRPPPLPPQQERPV--------------------------WQPVTSHGQWLPAETP 258
FEPR++PPP P WQPV + GQWLP +P
Sbjct 240 FEPRYQPPPAAAATPPPPETPPEPPREPQPEPQPEPQPQPQGRDWQPVGAEGQWLPPGSP 299
Query 259 GSQWASVEPETTPAAPPPGRRRRARHASPADQAYN-PPAYVELAAQYGESGR--RSRHSA 315
GS WA + E+T G RRRARH S AD+A++ P Y ESGR RSRHSA
Sbjct 300 GSNWAGADAEST------GGRRRARH-SGADEAWDGMPVEPVPPPPYAESGRRARSRHSA 352
Query 316 EHRDHDIGGSGAGT------------------------------GERPPSPPMAPPPPAE 345
E+RD+ + G+ P P +APPP AE
Sbjct 353 EYRDYGVRNFAPGSEPPAGPAPAPPPPAAATPPPPAAPAPSGPAAGASPPPRLAPPPAAE 412
Query 346 PTRRHRTADTPPDDSGGLHARDPL-TGGQSVADLMARLQVE 385
T RH P D ARD TGGQSVADL+ARLQV+
Sbjct 413 HTPRHGGEPEPADPR---RARDASGTGGQSVADLLARLQVQ 450
>gi|336458524|gb|EGO37495.1| hypothetical protein MAPs_12340 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=453
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 248/452 (55%), Positives = 278/452 (62%), Gaps = 78/452 (17%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVLSRGARVRRGGRRPGWVLLTALLVLA+GASSALVFT+RVELLKLAV+LALWAAVAGA
Sbjct 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAMGASSALVFTNRVELLKLAVILALWAAVAGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSVLYRRQSD DQ+RVRDLKLVYDLQLDREISARREYELT+ESQLRRELASELRA AAD
Sbjct 61 FVSVLYRRQSDADQSRVRDLKLVYDLQLDREISARREYELTVESQLRRELASELRAQAAD 120
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARAL-----DGESP---PADW 172
++A LRAEL+ALRTSLEILFD DL RPALG E E + RA +GE+P P DW
Sbjct 121 DLAELRAELSALRTSLEILFDTDLGQRPALGAFEGEPQPERAYSEWERNGENPRDTPVDW 180
Query 173 VSSDRVMAVRGGDGASRTDEASIIDVPE--------VGVPPVSGGPRHYEAPPPPQPEPL 224
V SDRV + R DE +IIDVPE P Y+ PP P EP
Sbjct 181 VPSDRVTSAPQEHPPGRHDETAIIDVPEEPLMPPRPQQPAPPRRERPRYQEPPGPT-EPR 239
Query 225 FEPRHRPPPLPPQQERPV--------------------------WQPVTSHGQWLPAETP 258
FEPR++PPP P WQPV + QWLP +P
Sbjct 240 FEPRYQPPPAAAATPPPPETPPEPPREPQPEPQPEPQPQPQGRDWQPVGAERQWLPPGSP 299
Query 259 GSQWASVEPETTPAAPPPGRRRRARHASPADQAYN-PPAYVELAAQYGESGR--RSRHSA 315
GS WA + E+T G RRRARH S AD+A++ P Y ESGR RSRHSA
Sbjct 300 GSNWAGADAEST------GGRRRARH-SGADEAWDGMPVEPVPPPPYAESGRRARSRHSA 352
Query 316 EHRDHDIGGSGAGT---------------------GERPPSPPMAPPPPAEPTRRHRTAD 354
E+RD+ + G+ P P +APPP AE T RH
Sbjct 353 EYRDYGVRNFAPGSEPPAGPAPAPPPPAPAPSGPAAGASPPPRLAPPPAAEHTPRHGGEP 412
Query 355 TPPDDSGGLHARDPL-TGGQSVADLMARLQVE 385
P D ARD TGGQSVADL+ARLQV+
Sbjct 413 EPADPR---RARDASGTGGQSVADLLARLQVQ 441
>gi|342862045|ref|ZP_08718689.1| hypothetical protein MCOL_24260 [Mycobacterium colombiense CECT
3035]
gi|342130585|gb|EGT83894.1| hypothetical protein MCOL_24260 [Mycobacterium colombiense CECT
3035]
Length=414
Score = 286 bits (732), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 226/400 (57%), Positives = 252/400 (63%), Gaps = 78/400 (19%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVLSRGARVRRGGRRPGWVLLTALLVLA+GASSALVFT+RVELLKLAV+LALWAAVAGA
Sbjct 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAMGASSALVFTNRVELLKLAVILALWAAVAGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSVLYRRQSD DQ+RVRDLKLVYDLQLDREISARREYELT+ESQLRRELASELRA AAD
Sbjct 61 FVSVLYRRQSDADQSRVRDLKLVYDLQLDREISARREYELTVESQLRRELASELRAQAAD 120
Query 121 EVAALRAELAALRTSLEILFDADLEHRPAL-GTVEKEARAARAL-----DGESP---PAD 171
++A LRAEL+ALRTSLEILFD DL HRPAL GT E E + RA +GE+P P D
Sbjct 121 DLAELRAELSALRTSLEILFDTDLAHRPALGGTPEAEPQPERAYSEWDRNGENPRDTPVD 180
Query 172 WVSSDRVMAVRGGDGASRTDEASIIDVPE-----------------------VGVPPVSG 208
WV SDRV +V D A R D+A IIDVPE P +
Sbjct 181 WVPSDRVTSV-PPDNAGRADDA-IIDVPEEPLIPPRQQPPPRRERVRHQYEPAADPAYAE 238
Query 209 GPRHYEAPPPPQ-------PEPLFEPRHRPPPLP-------------------------- 235
P + E P Q EP FEPRH+PPP P
Sbjct 239 EPSYAEEPSYAQEPSYSGPAEPRFEPRHQPPPAPAAQFQPEPQPEPAPRPEPAPEPEPQR 298
Query 236 -PQQERP--VWQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAY 292
PQ + P WQP + GQWLP PGS WA + T G RRRARH S D+A+
Sbjct 299 QPQAQWPGQGWQPAAAEGQWLPPGAPGSNWAGADAPTDST----GGRRRARH-SGVDEAW 353
Query 293 NP-PAYVELAAQYGESGR--RSRHSAEHRDHDIGGSGAGT 329
+ P A YG+SGR RSRHSAE+RD+ + G
Sbjct 354 DGLPVEPVPPAPYGDSGRRARSRHSAEYRDYGVRNFSPGN 393
>gi|254773207|ref|ZP_05214723.1| hypothetical protein MaviaA2_00796 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=368
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 219/374 (59%), Positives = 246/374 (66%), Gaps = 53/374 (14%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVLSRGARVRRGGRRPGWVLLTALLVLA+GASSALVFT+RVELLKLAV+LALWAAVAGA
Sbjct 3 MTVLSRGARVRRGGRRPGWVLLTALLVLAMGASSALVFTNRVELLKLAVILALWAAVAGA 62
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSVLYRRQSD DQ+RVRDLKLVYDLQLDREISARREYELT+ESQLRRELASELRA AAD
Sbjct 63 FVSVLYRRQSDADQSRVRDLKLVYDLQLDREISARREYELTVESQLRRELASELRAQAAD 122
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARAL-----DGESP---PADW 172
++A LRAEL+ALRTSLEILFD DL RPALG E E + RA +GE+P P DW
Sbjct 123 DLAELRAELSALRTSLEILFDTDLGQRPALGAFEGEPQPERAYSEWERNGENPRDTPVDW 182
Query 173 VSSDRVMAVRGGDGASRTDEASIIDVPE--------VGVPPVSGGPRHYEAPPPPQPEPL 224
V SDRV + R DE +IIDVPE P Y+ PP P EP
Sbjct 183 VPSDRVTSAPQEHPPGRHDETAIIDVPEEPLMPPRPQQPAPPRRERPRYQEPPGP-AEPR 241
Query 225 FEPRHRPPPLPPQQERPV--------------------------WQPVTSHGQWLPAETP 258
FEPR++PPP P WQPV + GQWLP +P
Sbjct 242 FEPRYQPPPAAAATPPPPEMPPEPPREPQPEPQPEPQPQPQGRDWQPVGAEGQWLPPGSP 301
Query 259 GSQWASVEPETTPAAPPPGRRRRARHASPADQAYN-PPAYVELAAQYGESGR--RSRHSA 315
GS WA + E+T G RRRARH S AD+A++ P Y ESGR RSRHSA
Sbjct 302 GSNWAGADAEST------GGRRRARH-SGADEAWDGMPVEPVPPPPYAESGRRARSRHSA 354
Query 316 EHRDHDIGGSGAGT 329
E+RD+ + G+
Sbjct 355 EYRDYGVRNFAPGS 368
>gi|118619360|ref|YP_907692.1| transmembrane protein rich in alanine, arginine and proline [Mycobacterium
ulcerans Agy99]
gi|118571470|gb|ABL06221.1| conserved transmembrane protein rich in alanine, arginine and
proline [Mycobacterium ulcerans Agy99]
Length=450
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 232/441 (53%), Positives = 267/441 (61%), Gaps = 59/441 (13%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVLSRGARVRRGGRRPGWVLLT LLVLAIGASSALVFT+RVELLKLAV+LALWAAVAGA
Sbjct 1 MTVLSRGARVRRGGRRPGWVLLTTLLVLAIGASSALVFTNRVELLKLAVVLALWAAVAGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSVLYRRQ++ DQAR RD+KLVYDLQLDREISARREYEL +ESQLRRELA+ELR AAD
Sbjct 61 FVSVLYRRQAEADQARARDMKLVYDLQLDREISARREYELAVESQLRRELAAELRGAAAD 120
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARAL-----DGESPPADWVSS 175
EVAALRAELA+LRTSL ILFDAD+E RPAL TV++E+R ARA+ +GESP DW+ S
Sbjct 121 EVAALRAELASLRTSLGILFDADVEQRPALETVDRESRTARAVADRLQNGESPATDWLPS 180
Query 176 DRVMAVRGGDGASRTDEASIIDVPEVGVPPVSG--------------------------- 208
DR+ R + +R +EA IIDVPEVGVPP+
Sbjct 181 DRIAMARRDENLNRAEEA-IIDVPEVGVPPLDERDVQPGRGPFLQPPPPAPPGPEHPAEW 239
Query 209 -GPRHYEAPPPPQPEPLFEPRHRPPPLPPQQERPVWQPVTSHGQWLPAETPGSQWASVEP 267
GP AP P R P P P E P+W+PV + GQWLP PGS W V
Sbjct 240 VGPPQEAAPVQPDLHYEPHRRPPPAPPVPNAEPPLWRPVAADGQWLPPGAPGSHW--VAE 297
Query 268 ETTPAAPPPGRRRRARHASPADQAYNPPAYVELAAQYGESGRRSRHSAEHRDHDIG---- 323
E A R R A D + E +YG RSRHS ++RD+ +G
Sbjct 298 EAAGAETQDRSSGRRRRARHYDSDEDQGDIGEFDREYGGRRSRSRHSTDYRDYGVGRLGA 357
Query 324 -------------------GSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDSGGLH 364
P +P +APPP + RHR + D G H
Sbjct 358 GPPPGPGPAQPPPMASAAPPWPGPQPAEPAAPRLAPPPAPDLASRHRRPEEERPDVAGSH 417
Query 365 ARDPLTGGQSVADLMARLQVE 385
D +GGQSVADLMARLQV+
Sbjct 418 DSDSQSGGQSVADLMARLQVQ 438
>gi|183985075|ref|YP_001853366.1| transmembrane protein rich in alanine, arginine and proline [Mycobacterium
marinum M]
gi|183178401|gb|ACC43511.1| conserved transmembrane protein rich in alanine, arginine and
proline [Mycobacterium marinum M]
Length=450
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 236/441 (54%), Positives = 274/441 (63%), Gaps = 59/441 (13%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVLSRGARVRRGGRRPGWVLLT LLVLAIGASSALVFT+RVELLKLAV+LALWAAVAGA
Sbjct 1 MTVLSRGARVRRGGRRPGWVLLTTLLVLAIGASSALVFTNRVELLKLAVVLALWAAVAGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSVLYRRQ++ DQAR RD+KLVYDLQLDREISARREYEL +ESQLRRELA+ELR AAD
Sbjct 61 FVSVLYRRQAEADQARARDMKLVYDLQLDREISARREYELAVESQLRRELAAELRGAAAD 120
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARAL-----DGESPPADWVSS 175
EVAALRAELA+LRTSL ILFDADLE RPAL TV++E+R ARA+ +GESP DW+ S
Sbjct 121 EVAALRAELASLRTSLGILFDADLEQRPALETVDRESRTARAVADRLQNGESPATDWLPS 180
Query 176 DRVMAVRGGDGASRTDEASIIDVPEVGVPPVS-------GGPR---------------HY 213
DR+ R + +R +EA IIDVPEVGVPP+ GGP +
Sbjct 181 DRIAMARRDENLNRAEEA-IIDVPEVGVPPLDERDVQPGGGPFLQPPPPAPPGPEHPAEW 239
Query 214 EAPP----PPQPEPLFEPRHRPPPLPPQQERPV--WQPVTSHGQWLPAETPGSQWASVEP 267
PP P QP+ +EP RPPP PP W+PV + GQWLP PGS W + E
Sbjct 240 VGPPQEAAPVQPDLHYEPHRRPPPAPPVPNAEPSPWRPVAADGQWLPPGAPGSHWVAEEA 299
Query 268 ETTPAAPPPGRRRRARHASPADQAYNPPAYVELAAQYGESGRRSRHSAEHRDHDIG---- 323
RRR +D+ E +YG RSRHS ++RD+ +G
Sbjct 300 AGAETQDRSSGRRRRARHYGSDEGQGDIG--EFDREYGGRRSRSRHSTDYRDYGVGRLGA 357
Query 324 -------------------GSGAGTGERPPSPPMAPPPPAEPTRRHRTADTPPDDSGGLH 364
P +P +APPP + RHR + D G H
Sbjct 358 GPPPGPGPAQPPPMAPAAPPWPGPQPAEPAAPRLAPPPAPDLASRHRRPEEERPDVAGSH 417
Query 365 ARDPLTGGQSVADLMARLQVE 385
D +GGQSVADLMARLQV+
Sbjct 418 DSDSQSGGQSVADLMARLQVQ 438
>gi|240172847|ref|ZP_04751506.1| transmembrane protein rich in alanine, arginine and proline [Mycobacterium
kansasii ATCC 12478]
Length=454
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 251/445 (57%), Positives = 281/445 (64%), Gaps = 63/445 (14%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVLSRGARVRRGGRRPGWVLLT LLVLAI ASSALVFT+RVELLKLAV+LALWAAVAGA
Sbjct 1 MTVLSRGARVRRGGRRPGWVLLTTLLVLAIAASSALVFTNRVELLKLAVILALWAAVAGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSVLYRRQ+D +QAR RDLKLVYDLQLDREISARREYELT+ES LRRELA+ELRA AAD
Sbjct 61 FVSVLYRRQADAEQARARDLKLVYDLQLDREISARREYELTVESHLRRELAAELRAAAAD 120
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEK----EARAARAL-----DGESPPAD 171
EVAALRAEL ALRTSLEILFD D EHRPAL ++K EAR +RA+ +G P AD
Sbjct 121 EVAALRAELTALRTSLEILFDTDFEHRPALEPMDKTGATEARRSRAVADRVQNGRGPSAD 180
Query 172 WVSSDRVMAVRGGDGASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPR--- 228
WVS DRV VR G+ +R +EA IIDVPEVG+PP P PP EP
Sbjct 181 WVSIDRVAVVRPGEAVNRAEEA-IIDVPEVGMPPYDDRDVSPAGPLPPSAEPAGTKHSAE 239
Query 229 -----HRPPPLPP----------------QQERPVWQPVTSHGQWLPAETPGSQWASVEP 267
+ P PP Q E W+PV + GQWLP PGS WA EP
Sbjct 240 RVGLPYETAPAPPGPRDEPRHRPPPAPPPQPEPSSWEPVAADGQWLPPGAPGSHWAPGEP 299
Query 268 ETTPAAPPPGRRRRARHASP-ADQAYNPPAYVELAAQYGESGRRSRHSAEHRDHDIGGSG 326
P A P GRRRR RH P DQ +VE+ YG RSRHS E+RDH +G G
Sbjct 300 AAAPTAQPAGRRRRYRHTRPEEDQGDISLGHVEVPGDYGGRRSRSRHSTEYRDHGVGSLG 359
Query 327 AGT--------------------------GERPPSPPMAPPPPAEPTRRHRTADTPPDDS 360
A + PP P +A PPP EP RHR+ + P+ +
Sbjct 360 AASRADGPSPVVAPPPSAVPPPPTPVPERPTAPPPPRLAAPPPPEPAARHRSPE--PEPA 417
Query 361 GGLHARDPLTGGQSVADLMARLQVE 385
G H D TGGQSVADL+ARLQV+
Sbjct 418 VGAHGSDAQTGGQSVADLLARLQVQ 442
>gi|118464078|ref|YP_879829.1| hypothetical protein MAV_0549 [Mycobacterium avium 104]
gi|118165365|gb|ABK66262.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=421
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 210/420 (50%), Positives = 239/420 (57%), Gaps = 87/420 (20%)
Query 42 VELLKLAVLLALWAAVAGAFVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELT 101
+ELLKLAV+LALWAAVAGAFVSVLYRRQSD DQ+RVRDLKLVYDLQLDREISARREYELT
Sbjct 1 MELLKLAVILALWAAVAGAFVSVLYRRQSDADQSRVRDLKLVYDLQLDREISARREYELT 60
Query 102 LESQLRRELASELRAPAADEVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAAR 161
+ESQLRRELASELRA AAD++A LRAEL+ALRTSLEILFD DL RPALG E E + R
Sbjct 61 VESQLRRELASELRAQAADDLAELRAELSALRTSLEILFDTDLGQRPALGAFEGEPQPER 120
Query 162 AL-----DGESP---PADWVSSDRVMAVRGGDGASRTDEASIIDVPE--------VGVPP 205
A +GE+P P DWV SDRV + R DE +IIDVPE P
Sbjct 121 AYSEWERNGENPRDTPVDWVPSDRVTSAPQEHPPGRHDETAIIDVPEEPLMPPRPQQPAP 180
Query 206 VSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQERPV----------------------- 242
Y+ PP P EP FEPR++PPP P
Sbjct 181 PRRERPRYQEPPGPT-EPRFEPRYQPPPAAAATPPPPETPPDPPREPQPEPQPEPQPQPQ 239
Query 243 ---WQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRARHASPADQAYN-PPAYV 298
WQPV + GQWLP +PGS WA + E+T G RRRARH S AD+A++ P
Sbjct 240 GRDWQPVGAEGQWLPPGSPGSNWAGADAEST------GGRRRARH-SGADEAWDGMPVEP 292
Query 299 ELAAQYGESGR--RSRHSAEHRDHDIGGSGAGT--------------------------- 329
Y ESGR RSRHSAE+RD+ + G+
Sbjct 293 VPPPPYAESGRRARSRHSAEYRDYGVRNFAPGSEPPAGPAPAPPPPAAATPPPPAAPAPS 352
Query 330 ---GERPPSPPMAPPPPAEPTRRHRTADTPPDDSGGLHARDPL-TGGQSVADLMARLQVE 385
PP P +APPP AE T RH P D ARD TGGQSVADL+ARLQV+
Sbjct 353 GPAAGAPPPPRLAPPPAAEHTPRHGGEPEPADPR---RARDASGTGGQSVADLLARLQVQ 409
>gi|254822687|ref|ZP_05227688.1| hypothetical protein MintA_22349 [Mycobacterium intracellulare
ATCC 13950]
Length=382
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 167/208 (81%), Positives = 179/208 (87%), Gaps = 8/208 (3%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFT+RVELLKLAV+LALWAAVAGA
Sbjct 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTNRVELLKLAVILALWAAVAGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSVLYRRQSD DQARVRDLKLVYDLQLDREISARREYELT+ESQLRRELASELRA AAD
Sbjct 61 FVSVLYRRQSDADQARVRDLKLVYDLQLDREISARREYELTVESQLRRELASELRAQAAD 120
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARAL-----DGESP---PADW 172
++A LRAEL+ALRTSLEILFD DL HRPALGTVE E + RA +GE+P P DW
Sbjct 121 DLAELRAELSALRTSLEILFDTDLAHRPALGTVESEPQPERAYSEWDRNGETPRDNPVDW 180
Query 173 VSSDRVMAVRGGDGASRTDEASIIDVPE 200
V SDRV +V + R DE +IIDVPE
Sbjct 181 VPSDRVTSVPQDNPRGRADETAIIDVPE 208
>gi|296166670|ref|ZP_06849095.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897935|gb|EFG77516.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=235
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 164/208 (79%), Positives = 177/208 (86%), Gaps = 8/208 (3%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVLSRGARVRRGGRRPGWVLLTALLVLA+GASSALVFT+RVELLKLAV+LALWAAVAGA
Sbjct 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAMGASSALVFTNRVELLKLAVILALWAAVAGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSVLYRRQSD DQ+RVRDLKLVYDLQLDREISARREYELT+ESQLRRELASELRA AAD
Sbjct 61 FVSVLYRRQSDADQSRVRDLKLVYDLQLDREISARREYELTVESQLRRELASELRAQAAD 120
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARAL-----DGESP---PADW 172
++A LRAEL+ALRTSLEILFD DL RPAL T E E RA +GE+P P DW
Sbjct 121 DLAELRAELSALRTSLEILFDTDLAQRPALETPEAEPAPERAYSEWDRNGETPRDAPYDW 180
Query 173 VSSDRVMAVRGGDGASRTDEASIIDVPE 200
VSSDRV +V +SR DE +IIDVPE
Sbjct 181 VSSDRVTSVPQDTPSSRADETAIIDVPE 208
>gi|108801727|ref|YP_641924.1| hypothetical protein Mmcs_4764 [Mycobacterium sp. MCS]
gi|119870878|ref|YP_940830.1| hypothetical protein Mkms_4850 [Mycobacterium sp. KMS]
gi|108772146|gb|ABG10868.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119696967|gb|ABL94040.1| conserved hypothetical protein [Mycobacterium sp. KMS]
Length=446
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 146/203 (72%), Positives = 162/203 (80%), Gaps = 4/203 (1%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVL RG R RRG RRPGW+LLT LLVLAI ASSALVFT+RVELLKLAV+LALWAAVA A
Sbjct 10 MTVLPRGPRARRGNRRPGWMLLTVLLVLAIVASSALVFTNRVELLKLAVILALWAAVAAA 69
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSV+YRRQSD DQA+ RDLKLVYDLQLDREISARREYELT+E+QLRRELA+EL+A AAD
Sbjct 70 FVSVIYRRQSDHDQAKARDLKLVYDLQLDREISARREYELTVETQLRRELANELQAQAAD 129
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRV-M 179
EVAALRAELAALRT+LEILFDADL HRPAL RA ++ VSS R+
Sbjct 130 EVAALRAELAALRTNLEILFDADLAHRPALEHDRTTVRAYSDWAPDNETTGRVSSSRLDE 189
Query 180 AVRGGD---GASRTDEASIIDVP 199
+R D SRT+E+ IIDVP
Sbjct 190 MLRDADIDESESRTEESPIIDVP 212
>gi|126437714|ref|YP_001073405.1| hypothetical protein Mjls_5150 [Mycobacterium sp. JLS]
gi|126237514|gb|ABO00915.1| hypothetical protein Mjls_5150 [Mycobacterium sp. JLS]
Length=446
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 144/203 (71%), Positives = 161/203 (80%), Gaps = 4/203 (1%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTVL RG R RRG RRPGW+LLT LLVLAI ASSALVFT+RVELLKLAV+LALWAAVA A
Sbjct 10 MTVLPRGPRARRGNRRPGWMLLTVLLVLAIVASSALVFTNRVELLKLAVILALWAAVAAA 69
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
FVSV+YRRQSD DQA+ RDLKLVYDLQLDREISARREYELT+E+QLRRELA+EL+A AAD
Sbjct 70 FVSVIYRRQSDHDQAKARDLKLVYDLQLDREISARREYELTVETQLRRELANELQAQAAD 129
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMA 180
EVAALRAELAALRT+LEILFDADL HRPAL RA ++ VSS R+
Sbjct 130 EVAALRAELAALRTNLEILFDADLAHRPALEHDRTTVRAYSDWAPDNETTGRVSSSRLDE 189
Query 181 V----RGGDGASRTDEASIIDVP 199
+ + SRT+E+ IIDVP
Sbjct 190 MLRDAEVDESESRTEESPIIDVP 212
>gi|315446246|ref|YP_004079125.1| hypothetical protein Mspyr1_47490 [Mycobacterium sp. Spyr1]
gi|315264549|gb|ADU01291.1| hypothetical protein Mspyr1_47490 [Mycobacterium sp. Spyr1]
Length=385
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/185 (66%), Positives = 140/185 (76%), Gaps = 10/185 (5%)
Query 22 LTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGAFVSVLYRRQSDVDQARVRDLK 81
+T LLVLAI ASSALVFT RVELL+LAV+LALWAAV AFVSV+YRRQSD DQA+VRDLK
Sbjct 1 MTVLLVLAIAASSALVFTSRVELLRLAVILALWAAVVAAFVSVIYRRQSDSDQAKVRDLK 60
Query 82 LVYDLQLDREISARREYELTLESQLRRELASELRAPAADEVAALRAELAALRTSLEILFD 141
LVYDLQL+REISARREYEL++ES LRRELASEL+A ++DEVA+LRAELAALR +LE LFD
Sbjct 61 LVYDLQLEREISARREYELSVESHLRRELASELQAQSSDEVASLRAELAALRANLEYLFD 120
Query 142 ADLEHRPALGTVEKEARAARA-LDGESPPADWVSSDRVMAVRGGDGASRTDEASIIDVPE 200
ADL HRPAL T R + +D E D V+A A T+E+ IIDVP
Sbjct 121 ADLSHRPALETERTAGRVTSSRIDTE---------DDVVAAAEEPDAPETEESPIIDVPA 171
Query 201 VGVPP 205
PP
Sbjct 172 EPHPP 176
>gi|145222014|ref|YP_001132692.1| hypothetical protein Mflv_1422 [Mycobacterium gilvum PYR-GCK]
gi|145214500|gb|ABP43904.1| hypothetical protein Mflv_1422 [Mycobacterium gilvum PYR-GCK]
Length=380
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/185 (66%), Positives = 140/185 (76%), Gaps = 10/185 (5%)
Query 22 LTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGAFVSVLYRRQSDVDQARVRDLK 81
+T LLVLAI ASSALVFT RVELL+LAV+LALWAAV AFVSV+YRRQSD DQA+VRDLK
Sbjct 1 MTVLLVLAIAASSALVFTSRVELLRLAVILALWAAVVAAFVSVIYRRQSDSDQAKVRDLK 60
Query 82 LVYDLQLDREISARREYELTLESQLRRELASELRAPAADEVAALRAELAALRTSLEILFD 141
LVYDLQL+REISARREYEL++ES LRRELASEL+A ++DEVA+LRAELAALR +LE LFD
Sbjct 61 LVYDLQLEREISARREYELSVESHLRRELASELQAQSSDEVASLRAELAALRANLEYLFD 120
Query 142 ADLEHRPALGTVEKEARAARA-LDGESPPADWVSSDRVMAVRGGDGASRTDEASIIDVPE 200
ADL HRPAL T R + +D E D V+A A T+E+ IIDVP
Sbjct 121 ADLSHRPALETERTAGRVTSSRIDTE---------DDVVAAAEEPDAPETEESPIIDVPA 171
Query 201 VGVPP 205
PP
Sbjct 172 EPHPP 176
>gi|169627643|ref|YP_001701292.1| hypothetical protein MAB_0539 [Mycobacterium abscessus ATCC 19977]
gi|169239610|emb|CAM60638.1| Conserved hypothetical transmembrane protein [Mycobacterium abscessus]
Length=493
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/217 (57%), Positives = 147/217 (68%), Gaps = 20/217 (9%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MT+ +R A+ RRG RRPGW LLTALLVLAIG+ ALVFTD+ L++ +LLALWAAV +
Sbjct 1 MTMPTRAAKPRRGSRRPGWALLTALLVLAIGSGIALVFTDKAIYLRVGLLLALWAAVIAS 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
F ++ YRRQSD DQA+VRD KLVYDLQL+REISARREYELT+ES+LR++LA E+ A AAD
Sbjct 61 FAALTYRRQSDTDQAKVRDQKLVYDLQLEREISARREYELTVESRLRQQLAGEIEAQAAD 120
Query 121 EVAALRAELAALRTSLEILFDADLEHRPALGT----------------VEKEARAARALD 164
E+A LRAELAALRT+LEILF+ DL RPA+ V + AA A
Sbjct 121 EIATLRAELAALRTNLEILFNTDLSDRPAIEHDPIRALGPWPGAEPQPVPTTSTAAFAHS 180
Query 165 GESP-PADWVSSDRVMAVRGGDGASRTDEASIIDVPE 200
P PA +D V D SRT E IIDV E
Sbjct 181 VREPQPA---VADEYQDVTAVDEDSRTSEYPIIDVAE 214
>gi|120406314|ref|YP_956143.1| hypothetical protein Mvan_5366 [Mycobacterium vanbaalenii PYR-1]
gi|119959132|gb|ABM16137.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=396
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 130/194 (68%), Positives = 144/194 (75%), Gaps = 19/194 (9%)
Query 17 PGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGAFVSVLYRRQSDVDQAR 76
PGW+L+T LLVLAI ASSALVFT+RVELLKLAV+LALWAAV AFVSV+YRRQSD DQA+
Sbjct 17 PGWILMTVLLVLAIAASSALVFTNRVELLKLAVILALWAAVVAAFVSVIYRRQSDADQAK 76
Query 77 VRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAADEVAALRAELAALRTSL 136
VRDLKLVYDLQLDREISARREYEL +E+ LRRELASELRA +ADEVAALRAELAALR +L
Sbjct 77 VRDLKLVYDLQLDREISARREYELAVETHLRRELASELRAQSADEVAALRAELAALRANL 136
Query 137 EILFDADLEHRPALGTVEKEARAARALDGESPPADWVSSDRVMAVRGGDGAS-----RTD 191
E LFD DL HRPA +E E A R VSS R+ A +TD
Sbjct 137 EFLFDTDLSHRPA---IETERTAGR-----------VSSSRIDTQEDFRAAEEPYAPKTD 182
Query 192 EASIIDVPEVGVPP 205
E+ IIDVP PP
Sbjct 183 ESPIIDVPAEPHPP 196
>gi|118470986|ref|YP_890320.1| hypothetical protein MSMEG_6099 [Mycobacterium smegmatis str.
MC2 155]
gi|118172273|gb|ABK73169.1| probable conserved transmembrane protein rich in alanine [Mycobacterium
smegmatis str. MC2 155]
Length=516
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/181 (71%), Positives = 141/181 (78%), Gaps = 4/181 (2%)
Query 25 LLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGAFVSVLYRRQSDVDQARVRDLKLVY 84
LLVLAI ASSALVFT+RVELLKLAV+LALWAAV AFVSV+YRRQSD+DQA+ RDLKLVY
Sbjct 2 LLVLAILASSALVFTNRVELLKLAVILALWAAVVAAFVSVIYRRQSDLDQAKARDLKLVY 61
Query 85 DLQLDREISARREYELTLESQLRRELASELRAPAADEVAALRAELAALRTSLEILFDADL 144
DLQLDREISARREYELT+E+QLRRELASELRA AADEVAALRAELAALR +LEILFDADL
Sbjct 62 DLQLDREISARREYELTVETQLRRELASELRAQAADEVAALRAELAALRANLEILFDADL 121
Query 145 EHRPALGTVEKEARAARALDGESPPADWVSSDRVMAVRGGDGASRTDEASIIDVPEVGVP 204
HRPAL T AR A + V + + R + RT+E+ IIDVP P
Sbjct 122 AHRPALETDRAAARPAGRVHASRLDVPDVETTDIRDYR----SERTEESPIIDVPAEPHP 177
Query 205 P 205
P
Sbjct 178 P 178
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/28 (54%), Positives = 20/28 (72%), Gaps = 1/28 (3%)
Query 243 WQPVTSHGQWLPAETPGSQWAS-VEPET 269
WQP + GQW+PA PGS WA+ V+P+
Sbjct 340 WQPAPAEGQWIPAGAPGSNWAAPVQPQN 367
>gi|333992533|ref|YP_004525147.1| hypothetical protein JDM601_3893 [Mycobacterium sp. JDM601]
gi|333488501|gb|AEF37893.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=461
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/204 (64%), Positives = 145/204 (72%), Gaps = 21/204 (10%)
Query 37 VFTDRVELLKLAVLLALWAAVAGAFVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARR 96
+FT RVELLKLAV++ALWAAVA AFVSV+YRRQSDVDQAR RDLKLVYDLQLDREISARR
Sbjct 1 MFTSRVELLKLAVIVALWAAVAAAFVSVIYRRQSDVDQARARDLKLVYDLQLDREISARR 60
Query 97 EYELTLESQLRRELASELRAPAADEVAALRAELAALRTSLEILFDADLEHRPALGTVEKE 156
EYELT+ESQLRRELASELRA AADEVAALRAELAALRT+LEILFD+DL HRPAL T
Sbjct 61 EYELTVESQLRRELASELRAQAADEVAALRAELAALRTNLEILFDSDLSHRPALETDSAA 120
Query 157 ARAARALDGESPPADWVSS----------DRVMAVRGGDGASRTDEASIIDVPEVGVPPV 206
RA +DW S A D ++T E+ IIDVPEVG+P
Sbjct 121 RTTIRAY------SDWARSGGESDGARATPAAAAYYPEDPVTQTTESPIIDVPEVGIP-- 172
Query 207 SGG---PRHYEAPPPPQPEPLFEP 227
+GG P ++ PPQP +P
Sbjct 173 TGGIPTPAAHQTYQPPQPSQTSQP 196
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/165 (33%), Positives = 72/165 (44%), Gaps = 30/165 (18%)
Query 243 WQPVTSHGQWLPAETPGSQWASVEPETTPAAPPPGRRRRA--RHASPADQAYNPPAYVEL 300
W+PV + G+WLP +PGS W++ ET P A GR A RHA A P E
Sbjct 301 WKPVGAEGEWLPPGSPGSNWSA---ETPPTAADSGRHGAADPRHAGEDAVAAAPERSAEA 357
Query 301 AAQYG-------------ESGRRSRHSAEHRDHDIGGSG---AGTGERPPSPPMAPPPPA 344
+++G R+RH E R G+ +P S P + P
Sbjct 358 PSRHGRHAGPGTLADGPVNGAERARHDGEGRRRARSRHSAEPVGSHAQPESAPGSAP--- 414
Query 345 EPTRRHRTADTPPDDSGGLHARDPLTGGQSVADLMARLQVESTGG 389
+ RH T P ++ P TGGQSVA+L+ARLQ T G
Sbjct 415 GRSARHSTGAEPGTEAA------PNTGGQSVAELLARLQATPTEG 453
>gi|111021385|ref|YP_704357.1| hypothetical protein RHA1_ro04413 [Rhodococcus jostii RHA1]
gi|110820915|gb|ABG96199.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=337
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/144 (51%), Positives = 101/144 (71%), Gaps = 5/144 (3%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MT R RR R +++ LL LA+ AS L+F+D V+LL++ ++ ALWAA GA
Sbjct 14 MTNPGRLKSARRNRRSASQMIVAGLLALAVIASLFLIFSDSVQLLRVGLVAALWAATVGA 73
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
YRR+S +D+A+V DL+ VY+LQL+REISARREYELT+E ++R SE+RA A+
Sbjct 74 IAMTKYRRESALDKAKVNDLQTVYELQLEREISARREYELTVEKRVR----SEVRAD-AE 128
Query 121 EVAALRAELAALRTSLEILFDADL 144
E+AALRAEL++LR +LE LFD +
Sbjct 129 ELAALRAELSSLRKNLEALFDGAM 152
>gi|226363739|ref|YP_002781521.1| hypothetical protein ROP_43290 [Rhodococcus opacus B4]
gi|226242228|dbj|BAH52576.1| hypothetical protein [Rhodococcus opacus B4]
Length=327
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/141 (52%), Positives = 100/141 (71%), Gaps = 5/141 (3%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MT R RR R +++ LL LA+ AS L+F+D V+LL++ ++ ALWAA GA
Sbjct 1 MTNPGRLKSARRNRRSASQMIVAGLLALAVIASLFLIFSDSVQLLRVGLVAALWAATVGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
YRR+S +D+A+V DL+ VY+LQL+REISARREYELT+E ++R SE+RA A+
Sbjct 61 IAMTKYRRESALDKAKVSDLQTVYELQLEREISARREYELTVEKRVR----SEVRAD-AE 115
Query 121 EVAALRAELAALRTSLEILFD 141
E+AALRAEL++LR +LE LFD
Sbjct 116 ELAALRAELSSLRKNLEALFD 136
>gi|312138058|ref|YP_004005394.1| integral membrane protein [Rhodococcus equi 103S]
gi|311887397|emb|CBH46709.1| putative integral membrane protein [Rhodococcus equi 103S]
Length=326
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/151 (51%), Positives = 108/151 (72%), Gaps = 6/151 (3%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTV R +VRR R +++ L+VLA+ AS L+F++ V+LL++ +++ALWAA GA
Sbjct 1 MTVPGRAKQVRRNRRSASQMIVAGLVVLAVVASLLLIFSESVQLLRVGLVVALWAATLGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
YRR+S +D+A+VRDL+ VY+LQL+REI+ARREYEL +E ++R EL +E A+
Sbjct 61 IAMTKYRRESALDKAKVRDLQKVYELQLEREITARREYELGVEVRVRGELGAE-----AE 115
Query 121 EVAALRAELAALRTSLEILFDADL-EHRPAL 150
+AALR ELAALR +LE+LFD L E R AL
Sbjct 116 TIAALREELAALRKNLEVLFDGRLPEDRVAL 146
>gi|226304120|ref|YP_002764078.1| hypothetical protein RER_06310 [Rhodococcus erythropolis PR4]
gi|226183235|dbj|BAH31339.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=361
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/144 (49%), Positives = 101/144 (71%), Gaps = 5/144 (3%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MT R RR R +++ ALL LA+ AS L+F++ V+LL++ +++ALWAA GA
Sbjct 1 MTNSGRSKSARRSKRSASQMIIAALLALAVIASLFLIFSNSVQLLRVGLVVALWAATLGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
YRR+S +D+A+V DL+ VY+LQL+REISARREYEL++E ++RRE+ ++ A+
Sbjct 61 IAMTKYRRESALDKAKVADLQTVYELQLEREISARREYELSVEGRVRREVTAD-----AE 115
Query 121 EVAALRAELAALRTSLEILFDADL 144
E+A LRAEL ALR +LE LF+ L
Sbjct 116 ELAGLRAELVALRRNLEALFEGGL 139
>gi|325675041|ref|ZP_08154728.1| hypothetical protein HMPREF0724_12510 [Rhodococcus equi ATCC
33707]
gi|325554627|gb|EGD24302.1| hypothetical protein HMPREF0724_12510 [Rhodococcus equi ATCC
33707]
Length=303
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/116 (55%), Positives = 88/116 (76%), Gaps = 6/116 (5%)
Query 36 LVFTDRVELLKLAVLLALWAAVAGAFVSVLYRRQSDVDQARVRDLKLVYDLQLDREISAR 95
L+F++ V+LL++ +++ALWAA GA YRR+S +D+A+VRDL+ VY+LQL+REI+AR
Sbjct 17 LIFSESVQLLRVGLVVALWAATLGAIAMTKYRRESALDKAKVRDLQKVYELQLEREITAR 76
Query 96 REYELTLESQLRRELASELRAPAADEVAALRAELAALRTSLEILFDADL-EHRPAL 150
REYEL +E ++R EL +E A+ +AALR ELAALR +LE+LFD L E R AL
Sbjct 77 REYELGVEVRVRGELGAE-----AETIAALREELAALRKNLEVLFDGRLPEDRVAL 127
>gi|333917995|ref|YP_004491576.1| hypothetical protein AS9A_0317 [Amycolicicoccus subflavus DQS3-9A1]
gi|333480216|gb|AEF38776.1| hypothetical protein AS9A_0317 [Amycolicicoccus subflavus DQS3-9A1]
Length=228
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/138 (46%), Positives = 97/138 (71%), Gaps = 0/138 (0%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGA 60
MTV + RR ++ L+ AL +LAI AS LV ++ VE L++ ++ ALWAA GA
Sbjct 1 MTVQGQPRVRRRRRQKSNSALIVALFLLAIVASIFLVASNSVETLRIGIVAALWAAFLGA 60
Query 61 FVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAAD 120
YR++++ D+A+VRDL++VY++QL RE++ARR +ELTLES++RREL +E+R+ +
Sbjct 61 LAVTKYRKEAEADRAKVRDLRMVYEMQLSREVAARRRHELTLESRIRRELDAEVRSDTSQ 120
Query 121 EVAALRAELAALRTSLEI 138
++AA+ EL+ALR LE
Sbjct 121 QLAAVHRELSALRGHLEF 138
>gi|229494569|ref|ZP_04388332.1| putative conserved transmembrane protein rich in alanine [Rhodococcus
erythropolis SK121]
gi|229318931|gb|EEN84789.1| putative conserved transmembrane protein rich in alanine [Rhodococcus
erythropolis SK121]
Length=354
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/109 (53%), Positives = 84/109 (78%), Gaps = 5/109 (4%)
Query 36 LVFTDRVELLKLAVLLALWAAVAGAFVSVLYRRQSDVDQARVRDLKLVYDLQLDREISAR 95
L+F++ V+LL++ +++ALWAA GA YRR+S +D+A+V DL+ VY+LQL+REISAR
Sbjct 17 LIFSNSVQLLRVGLVVALWAATLGAIAMTKYRRESALDKAKVADLQTVYELQLEREISAR 76
Query 96 REYELTLESQLRRELASELRAPAADEVAALRAELAALRTSLEILFDADL 144
REYEL++E ++RRE+ ++ A+E+A LRAEL ALR +LE LF+ L
Sbjct 77 REYELSVEGRVRREVTAD-----AEELAGLRAELVALRRNLEALFEGGL 120
>gi|296392861|ref|YP_003657745.1| hypothetical protein Srot_0427 [Segniliparus rotundus DSM 44985]
gi|296180008|gb|ADG96914.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985]
Length=452
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/155 (43%), Positives = 97/155 (63%), Gaps = 9/155 (5%)
Query 11 RRGGRRPGWVLLTA---LLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGAFVSVLYR 67
RR R G L A V A+GAS A+V+T L++ ++ ALWAA+ AF++ R
Sbjct 9 RRKASRKGATLSVAYALCFVFAVGASVAVVYTGNDMLMRFGLVFALWAALGWAFIADQSR 68
Query 68 RQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAADEVAALRA 127
R++++ A+ D KL+YDLQL+REI+AR YEL+LE +LRR+L +E + +A L+
Sbjct 69 RKAELVSAKASDYKLIYDLQLEREIAARHHYELSLEGELRRQLTAEADSATHSALAELQQ 128
Query 128 ELAALRTSLEILFDADLEH-RPALGTVEKEARAAR 161
++A LR L+ L D DLE+ +PAL +ARA R
Sbjct 129 QVALLRGQLQELLDQDLEYDQPAL-----KARATR 158
>gi|302530782|ref|ZP_07283124.1| predicted protein [Streptomyces sp. AA4]
gi|302439677|gb|EFL11493.1| predicted protein [Streptomyces sp. AA4]
Length=626
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/131 (46%), Positives = 90/131 (69%), Gaps = 4/131 (3%)
Query 14 GRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGAFVSVLYRRQSDVD 73
GRRPG L L+LA+GA+ ALV +D + L+L ++ ALWAA+ GAF++V R+ +
Sbjct 10 GRRPGRPWLVVGLLLAVGATLALVLSDDLRYLRLGIVAALWAALIGAFLAVRARKNAAHS 69
Query 74 QARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAADEVAALRAELAALR 133
+ V + + VY+L+L+REI+ARREYEL LE++ R ++ R +E+ ALRAE+AALR
Sbjct 70 EDAVAEAQAVYELELEREIAARREYELELETEAREAAQAQSR----EELDALRAEVAALR 125
Query 134 TSLEILFDADL 144
SL+ LF ++
Sbjct 126 ESLQSLFGGEV 136
>gi|343924372|ref|ZP_08763922.1| hypothetical protein GOALK_015_00180 [Gordonia alkanivorans NBRC
16433]
gi|343765704|dbj|GAA10848.1| hypothetical protein GOALK_015_00180 [Gordonia alkanivorans NBRC
16433]
Length=389
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/132 (47%), Positives = 94/132 (72%), Gaps = 7/132 (5%)
Query 36 LVFTDRVELL-KLAVLLALWAAVAGAFVSVLYRRQSDVDQARVRDLKLVYDLQLDREISA 94
+VFTDR+ +L LAV+ ALWAAV GA + +RRQ++ +A+ RDL+LVY+LQL+REI+A
Sbjct 37 MVFTDRLSILGSLAVIAALWAAVIGAILVTKFRRQAESAEAKSRDLRLVYELQLEREIAA 96
Query 95 RREYELTLESQLRRELASELRAPAADEVAALRAELAALRTSLEILFDADL-EHRPALGTV 153
RR+YEL +E+ +R+E+ +E + +E++ L+A++ ALR+SLE+L L + R AL +
Sbjct 97 RRQYELDVETTIRKEITAE----SNEELSELKAQVLALRSSLEMLLGEPLPDQRAALSS- 151
Query 154 EKEARAARALDG 165
EK A L G
Sbjct 152 EKMRELASGLSG 163
>gi|300790545|ref|YP_003770836.1| hypothetical protein AMED_8741 [Amycolatopsis mediterranei U32]
gi|299800059|gb|ADJ50434.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length=808
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/131 (46%), Positives = 88/131 (68%), Gaps = 4/131 (3%)
Query 14 GRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGAFVSVLYRRQSDVD 73
GR G L VLAIGA+ ALV +D + L+L ++ ALWAA+ GAF++V YR+ +
Sbjct 10 GRLLGRPWLVVGFVLAIGATLALVLSDDLRYLRLGIVAALWAALIGAFLAVKYRKSAAQS 69
Query 74 QARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAADEVAALRAELAALR 133
+ V + + VY+L+L+REI+ARREYEL +E++ R S+ R +E+ ALRAE++ALR
Sbjct 70 EDAVAEAQAVYELELEREIAARREYELEMEAENRTAADSKGR----EELEALRAEVSALR 125
Query 134 TSLEILFDADL 144
SL+ LF ++
Sbjct 126 DSLQSLFGGEV 136
>gi|262203866|ref|YP_003275074.1| hypothetical protein Gbro_4011 [Gordonia bronchialis DSM 43247]
gi|262087213|gb|ACY23181.1| hypothetical protein Gbro_4011 [Gordonia bronchialis DSM 43247]
Length=456
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/141 (49%), Positives = 99/141 (71%), Gaps = 5/141 (3%)
Query 1 MTVLSRGARVRRGGRRPGWVLLTALLVLAIGASSALVFTDRVELL-KLAVLLALWAAVAG 59
T R A RR GR LL L+VLA+ AS +VFTD + + LAV+ ALWAAV G
Sbjct 2 TTSNGRSADSRRSGRSVSQWLLGLLIVLALAASILMVFTDSLTITGSLAVIAALWAAVIG 61
Query 60 AFVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAA 119
A + +RRQ++ +A+ RDL+LVY+LQL+REI+ARR+YEL +E+ +R+E+++E A
Sbjct 62 AILVTKFRRQAESAEAKSRDLRLVYELQLEREIAARRQYELDVETTIRKEVSAE----AN 117
Query 120 DEVAALRAELAALRTSLEILF 140
+E+A L+A++ ALR+SLE+L
Sbjct 118 EELAELKAQVLALRSSLELLI 138
>gi|326384081|ref|ZP_08205764.1| hypothetical protein SCNU_14149 [Gordonia neofelifaecis NRRL
B-59395]
gi|326197241|gb|EGD54432.1| hypothetical protein SCNU_14149 [Gordonia neofelifaecis NRRL
B-59395]
Length=323
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/136 (48%), Positives = 91/136 (67%), Gaps = 6/136 (4%)
Query 18 GWVLLTALLVLAIGASSALVFTDRVEL-LKLAVLLALWAAVAGAFVSVLYRRQSDVDQAR 76
G L+ +VLAI AS ++F + + LAV+ ALWAAV GA + YRRQ+DV ++R
Sbjct 41 GQWLIGLFVVLAIVASLLMIFGNDFSVPATLAVIAALWAAVIGAVLVTKYRRQADVAESR 100
Query 77 VRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAADEVAALRAELAALRTSL 136
RDL+LVY+LQL+REI+ARR+YE +ES +R+E+ASE E+ L+A++ ALR SL
Sbjct 101 SRDLRLVYELQLEREIAARRQYESDVESAIRQEVASESNV----ELEELKAQVLALRASL 156
Query 137 EILFDADL-EHRPALG 151
E L L + R A+G
Sbjct 157 EQLLGTPLPDMRAAIG 172
>gi|296138301|ref|YP_003645544.1| hypothetical protein Tpau_0565 [Tsukamurella paurometabola DSM
20162]
gi|296026435|gb|ADG77205.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=381
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 128/419 (31%), Positives = 178/419 (43%), Gaps = 81/419 (19%)
Query 11 RRGGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGAFVSVLYRRQS 70
RR G +L A++VLA+ + +F+D LA++L +W V AF+ + R
Sbjct 12 RRSNAGAGQWMLGAVIVLAVAGTGMWIFSDDKRWGLLALILLVWGLVIAAFL--IARNAR 69
Query 71 DVDQARVRD--LKLVYDLQLDREISARREYELTLESQLRRELASELRAPAADEVAALRAE 128
D+ A ++ LK VY+LQL+REISARREYEL LE LR SELR + +E+ AL+AE
Sbjct 70 DIRSAESKESGLKAVYELQLEREISARREYELQLEHDLR----SELRHESNEELTALKAE 125
Query 129 LAALRTSLEILFDADLEHRPALGTVEKEARAA---RALDGESPPADWVSSDRVMAVRGGD 185
+ ALR +LE L D LG E AA RA+D + + + DR A +
Sbjct 126 VLALRANLEELLGRD------LGPSYTELYAAAEQRAIDAQRAKSVFEDDDRFRAQQDFA 179
Query 186 GASRTDEASIIDVPEVGVPPVSGGPRHYEAPPPPQPEPLFEPRHRPPPLPPQQERPVWQP 245
G VP PPV +Y A P F P E+PV P
Sbjct 180 G-----------VP----PPVPDVDSYYGAASAVNDVPDF---------PAAAEQPVDAP 215
Query 246 VTSHGQWLPAE-TPGSQWASVEPETTPAAPPPGRRRRARHASPADQAY-----NPPAYVE 299
+ P E TP + + +V +PAA PP A P D + +V
Sbjct 216 SAPN---RPQEDTPTAVFEAVVDPQSPAAAPP------VDAEPVDVEHIDHIDGDEPFVP 266
Query 300 LAAQYGESGRRSRHSAEHRDHDIGGSGAGTGERPPSPPMAPPPPAEPTRRHRT------- 352
LA Q SG R D + P AP PA + H
Sbjct 267 LAPQ---SGYRPPFPPRRFTPDAAQQQPPQFAQYAPPERAPQQPAPADQVHSIPTVPPFP 323
Query 353 ----------ADTPPDDSGGLHARDPLTG----GQSVADLMARLQVESTGGGRRRRRGE 397
+T P+D +H +D G G +VA+L+AR+ ++ G RRR+ E
Sbjct 324 AAEPTPAAPLQETRPEDD-DVHEQDSTRGQHSSGSTVAELIARMNADTERSGGRRRKPE 381
>gi|54022368|ref|YP_116610.1| hypothetical protein nfa4040 [Nocardia farcinica IFM 10152]
gi|54013876|dbj|BAD55246.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=548
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/134 (48%), Positives = 95/134 (71%), Gaps = 6/134 (4%)
Query 18 GWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGAFVSVLYRRQSDVDQARV 77
G + L++L + AS L+F++ V ++++ ++ ALWAA GA + YR+ + VD+A+V
Sbjct 18 GRFFIGTLILLGLVASVFLIFSNSVHMIRVGMVAALWAAAIGAMAATKYRKDAAVDKAKV 77
Query 78 RDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAADEVAALRAELAALRTSLE 137
RDL+ VY+LQL+REI+ARREYEL +E+++R E+ ++ E+AALRAEL+ LR SL+
Sbjct 78 RDLQTVYELQLEREITARREYELGVEARVREEVGADAA-----ELAALRAELSVLRQSLQ 132
Query 138 ILFDADL-EHRPAL 150
LFD DL RPAL
Sbjct 133 RLFDGDLPMDRPAL 146
>gi|256374474|ref|YP_003098134.1| hypothetical protein Amir_0319 [Actinosynnema mirum DSM 43827]
gi|255918777|gb|ACU34288.1| hypothetical protein Amir_0319 [Actinosynnema mirum DSM 43827]
Length=556
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/163 (40%), Positives = 95/163 (59%), Gaps = 10/163 (6%)
Query 39 TDRVELLKLAVLLALWAAVAGAFVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARREY 98
+D L+LAV+ ALWAA+ GAF++ YRRQ + V DL+ VY+L+L+RE++ARRE+
Sbjct 41 SDNARWLRLAVVSALWAALVGAFLAARYRRQVADREDEVADLQNVYELELEREVAARREF 100
Query 99 ELTLESQLRRELASELRAPAADEVAALRAELAALRTSLEILFDAD-LEHRPALGTVEKEA 157
EL LE++ R+ + A D++ ALR EL ALR +LE L + L R AL EA
Sbjct 101 ELELETEAHRKAQED----AKDDLDALRGELRALRENLEALLGGEVLVERVAL---RAEA 153
Query 158 RAARALDGES--PPADWVSSDRVMAVRGGDGASRTDEASIIDV 198
R+L +S + VS+ V A + D+ S++D+
Sbjct 154 TRMRSLGDQSRLDQSRLVSAMNEHRVITSGKAKKDDQPSVVDL 196
>gi|340532232|gb|AEK47437.1| hypothetical protein RAM_44850 [Amycolatopsis mediterranei S699]
Length=776
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/108 (43%), Positives = 75/108 (70%), Gaps = 4/108 (3%)
Query 37 VFTDRVELLKLAVLLALWAAVAGAFVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARR 96
+ +D + L+L ++ ALWAA+ GAF++V YR+ + + V + + VY+L+L+REI+ARR
Sbjct 1 MLSDDLRYLRLGIVAALWAALIGAFLAVKYRKSAAQSEDAVAEAQAVYELELEREIAARR 60
Query 97 EYELTLESQLRRELASELRAPAADEVAALRAELAALRTSLEILFDADL 144
EYEL +E++ R S+ R +E+ ALRAE++ALR SL+ LF ++
Sbjct 61 EYELEMEAENRTAADSKGR----EELEALRAEVSALRDSLQSLFGGEV 104
>gi|317507810|ref|ZP_07965511.1| hypothetical protein HMPREF9336_01883 [Segniliparus rugosus ATCC
BAA-974]
gi|316253852|gb|EFV13221.1| hypothetical protein HMPREF9336_01883 [Segniliparus rugosus ATCC
BAA-974]
Length=487
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/126 (42%), Positives = 82/126 (66%), Gaps = 6/126 (4%)
Query 37 VFTDRVELLKLAVLLALWAAVAGAFVSVLYRRQSDVDQARVRDLKLVYDLQLDREISARR 96
++T ++ + ALWAA+ AF++ RR++++ A+ D KL+YDLQL+REI+AR
Sbjct 27 IYTGNETWMRFGFVAALWAALGWAFIADQSRRKAELVSAKASDYKLIYDLQLEREIAARH 86
Query 97 EYELTLESQLRRELASELRAPAADEVAALRAELAALRTSLEILFDADLEH-RPALGTVEK 155
YEL+LE++LRR+L +E + +A L+ ++A LR L+ L D DLE+ +PAL
Sbjct 87 HYELSLENELRRQLTAENDSTTHSILAELQQQVAVLRGQLQELLDQDLEYDQPAL----- 141
Query 156 EARAAR 161
+ARA R
Sbjct 142 KARATR 147
>gi|237786209|ref|YP_002906914.1| hypothetical protein ckrop_1646 [Corynebacterium kroppenstedtii
DSM 44385]
gi|237759121|gb|ACR18371.1| hypothetical protein ckrop_1646 [Corynebacterium kroppenstedtii
DSM 44385]
Length=570
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/164 (33%), Positives = 82/164 (50%), Gaps = 10/164 (6%)
Query 13 GGRRPGWVLLTALLVLAIGASSALVFTDRVELLKLAVLLALWAAVAGAFVSVLYRRQSDV 72
G + + + +LV A+ A+ ++FTD K+AVL ALWAA+ G R+Q D
Sbjct 38 GSGKFSFAAIVVMLVFAVVATILMLFTDSETWTKIAVLCALWAAIVGCIAVARLRKQVDN 97
Query 73 DQARVRDLKLVYDLQLDREISARREYELTLESQLRRELASELRAPAADEVAALRAELAAL 132
Q +L+ ++ +L+RE++ RE EL LE L + + AD +RAEL L
Sbjct 98 QQRDTDNLERLHQAELERELATHREQELILEQNYYDSLQEQEQNTLAD----IRAELTVL 153
Query 133 RTSLEILFDADLE-HRPALGTVEKEARAARALDGESPPADWVSS 175
R +L + DL+ R AL +A A R L+ E D S+
Sbjct 154 RENLSAMMGTDLDTERTAL-----KAEAQRILELERDSKDSSST 192
Lambda K H
0.315 0.133 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 779602889160
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40