BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3605c Length=158 Score E Sequences producing significant alignments: (Bits) Value gi|15610741|ref|NP_218122.1| hypothetical protein Rv3605c [Mycob... 307 3e-82 gi|298527083|ref|ZP_07014492.1| conserved secreted protein [Myco... 305 2e-81 gi|15843217|ref|NP_338254.1| hypothetical protein MT3710 [Mycoba... 305 2e-81 gi|254822686|ref|ZP_05227687.1| putative secreted protein [Mycob... 261 3e-68 gi|240172848|ref|ZP_04751507.1| putative secreted protein [Mycob... 246 5e-64 gi|289571844|ref|ZP_06452071.1| conserved secreted protein [Myco... 239 1e-61 gi|41406551|ref|NP_959387.1| hypothetical protein MAP0453 [Mycob... 231 3e-59 gi|118463545|ref|YP_879827.1| hypothetical protein MAV_0548 [Myc... 229 9e-59 gi|296166671|ref|ZP_06849096.1| conserved hypothetical protein [... 224 3e-57 gi|15827024|ref|NP_301287.1| hypothetical protein ML0227 [Mycoba... 223 9e-57 gi|342862044|ref|ZP_08718688.1| hypothetical protein MCOL_24255 ... 222 1e-56 gi|183985076|ref|YP_001853367.1| hypothetical protein MMAR_5108 ... 204 4e-51 gi|118619361|ref|YP_907693.1| hypothetical protein MUL_4187 [Myc... 202 1e-50 gi|120406315|ref|YP_956144.1| hypothetical protein Mvan_5367 [My... 197 3e-49 gi|145222013|ref|YP_001132691.1| hypothetical protein Mflv_1421 ... 186 9e-46 gi|315446247|ref|YP_004079126.1| hypothetical protein Mspyr1_475... 186 1e-45 gi|108801728|ref|YP_641925.1| hypothetical protein Mmcs_4765 [My... 184 3e-45 gi|126437715|ref|YP_001073406.1| hypothetical protein Mjls_5151 ... 184 4e-45 gi|118473258|ref|YP_890321.1| hypothetical protein MSMEG_6100 [M... 174 4e-42 gi|333992534|ref|YP_004525148.1| hypothetical protein JDM601_389... 170 6e-41 gi|169627642|ref|YP_001701291.1| hypothetical protein MAB_0538 [... 162 1e-38 gi|333917994|ref|YP_004491575.1| hypothetical protein AS9A_0316 ... 110 5e-23 gi|343924373|ref|ZP_08763923.1| hypothetical protein GOALK_015_0... 107 7e-22 gi|111021384|ref|YP_704356.1| hypothetical protein RHA1_ro04412 ... 105 2e-21 gi|296138300|ref|YP_003645543.1| hypothetical protein Tpau_0564 ... 103 9e-21 gi|226363738|ref|YP_002781520.1| hypothetical protein ROP_43280 ... 103 1e-20 gi|229494125|ref|ZP_04387888.1| conserved hypothetical protein [... 101 5e-20 gi|226304119|ref|YP_002764077.1| hypothetical protein RER_06300 ... 101 5e-20 gi|312138057|ref|YP_004005393.1| integral membrane protein [Rhod... 97.1 8e-19 gi|325675042|ref|ZP_08154729.1| hypothetical protein HMPREF0724_... 97.1 9e-19 gi|326384082|ref|ZP_08205765.1| hypothetical protein SCNU_14154 ... 95.1 3e-18 gi|331699838|ref|YP_004336077.1| hypothetical protein Psed_6122 ... 94.4 5e-18 gi|302530783|ref|ZP_07283125.1| hypothetical protein SSMG_07165 ... 93.2 1e-17 gi|262203867|ref|YP_003275075.1| hypothetical protein Gbro_4012 ... 92.8 2e-17 gi|257057510|ref|YP_003135342.1| hypothetical protein Svir_35590... 87.8 5e-16 gi|300790546|ref|YP_003770837.1| hypothetical protein AMED_8742 ... 84.3 5e-15 gi|54022367|ref|YP_116609.1| hypothetical protein nfa4030 [Nocar... 80.9 5e-14 gi|225022117|ref|ZP_03711309.1| hypothetical protein CORMATOL_02... 80.5 8e-14 gi|38234560|ref|NP_940327.1| hypothetical protein DIP1996 [Coryn... 79.7 1e-13 gi|256374473|ref|YP_003098133.1| hypothetical protein Amir_0318 ... 79.0 2e-13 gi|117927418|ref|YP_871969.1| hypothetical protein Acel_0209 [Ac... 77.4 7e-13 gi|237786210|ref|YP_002906915.1| hypothetical protein ckrop_1647... 76.3 1e-12 gi|25029093|ref|NP_739147.1| hypothetical protein CE2537 [Coryne... 76.3 2e-12 gi|134097015|ref|YP_001102676.1| hypothetical protein SACE_0402 ... 70.9 6e-11 gi|86743079|ref|YP_483479.1| hypothetical protein Francci3_4404 ... 68.6 3e-10 gi|227505946|ref|ZP_03935995.1| conserved hypothetical protein [... 67.4 7e-10 gi|227834061|ref|YP_002835768.1| hypothetical protein cauri_2239... 66.2 2e-09 gi|306836922|ref|ZP_07469875.1| conserved hypothetical protein [... 65.9 2e-09 gi|19553885|ref|NP_601887.1| hypothetical protein NCgl2598 [Cory... 65.9 2e-09 gi|227502062|ref|ZP_03932111.1| conserved hypothetical protein [... 65.9 2e-09 >gi|15610741|ref|NP_218122.1| hypothetical protein Rv3605c [Mycobacterium tuberculosis H37Rv] gi|31794781|ref|NP_857274.1| hypothetical protein Mb3635c [Mycobacterium bovis AF2122/97] gi|121639524|ref|YP_979748.1| putative secreted protein [Mycobacterium bovis BCG str. Pasteur 1173P2] 73 more sequence titles Length=158 Score = 307 bits (787), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 158/158 (100%), Positives = 158/158 (100%), Gaps = 0/158 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI Sbjct 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT Sbjct 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGAES 158 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGAES Sbjct 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGAES 158 >gi|298527083|ref|ZP_07014492.1| conserved secreted protein [Mycobacterium tuberculosis 94_M4241A] gi|298496877|gb|EFI32171.1| conserved secreted protein [Mycobacterium tuberculosis 94_M4241A] Length=158 Score = 305 bits (781), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 157/158 (99%), Positives = 157/158 (99%), Gaps = 0/158 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI Sbjct 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT Sbjct 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGAES 158 GTVVAAGSALALVVAALW QHCCKSPQDPTEHADGAES Sbjct 121 GTVVAAGSALALVVAALWRQHCCKSPQDPTEHADGAES 158 >gi|15843217|ref|NP_338254.1| hypothetical protein MT3710 [Mycobacterium tuberculosis CDC1551] gi|13883572|gb|AAK48068.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|323717713|gb|EGB26913.1| secreted protein [Mycobacterium tuberculosis CDC1551A] Length=158 Score = 305 bits (781), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 157/158 (99%), Positives = 157/158 (99%), Gaps = 0/158 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI Sbjct 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 SDGEIGDGPGW HPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT Sbjct 61 SDGEIGDGPGWRHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGAES 158 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGAES Sbjct 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGAES 158 >gi|254822686|ref|ZP_05227687.1| putative secreted protein [Mycobacterium intracellulare ATCC 13950] Length=158 Score = 261 bits (667), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 134/158 (85%), Positives = 142/158 (90%), Gaps = 0/158 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 MGPTRKRDLTAAVVGAA +GYLLV LYRWFPPITV TGLSLLAVA+ EALWARYVR KI Sbjct 1 MGPTRKRDLTAAVVGAAVLGYLLVNGLYRWFPPITVLTGLSLLAVAIGEALWARYVRAKI 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 +DGEIG G G LHPL VARSLMVAKASAWVGAL+ GWW+G+L YFLPRRSWLRAAAEDTT Sbjct 61 ADGEIGPGRGRLHPLAVARSLMVAKASAWVGALMLGWWVGLLVYFLPRRSWLRAAAEDTT 120 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGAES 158 GTVVAA SALALVVAALWLQHCCKSP DPTE +GAE+ Sbjct 121 GTVVAAISALALVVAALWLQHCCKSPYDPTERGEGAET 158 >gi|240172848|ref|ZP_04751507.1| putative secreted protein [Mycobacterium kansasii ATCC 12478] Length=158 Score = 246 bits (629), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 132/158 (84%), Positives = 137/158 (87%), Gaps = 0/158 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 MGPTRKRDL AAV+ AA VGY LV L+RWFP ITVWTGLSLL VA+AEALWARYVR KI Sbjct 1 MGPTRKRDLMAAVIAAAVVGYPLVIALFRWFPQITVWTGLSLLGVAIAEALWARYVRTKI 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 DGEIGDGPG LHPL VARSLMVAKASAWVGALV GWWIGVL Y LPRRSW R A EDTT Sbjct 61 GDGEIGDGPGRLHPLAVARSLMVAKASAWVGALVLGWWIGVLVYLLPRRSWQRVAVEDTT 120 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGAES 158 GTVVAAGSALALVVAALWLQHCCKSP DPTE +GAE+ Sbjct 121 GTVVAAGSALALVVAALWLQHCCKSPPDPTEGGEGAET 158 >gi|289571844|ref|ZP_06452071.1| conserved secreted protein [Mycobacterium tuberculosis T17] gi|289545598|gb|EFD49246.1| conserved secreted protein [Mycobacterium tuberculosis T17] Length=123 Score = 239 bits (610), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 122/123 (99%), Positives = 123/123 (100%), Gaps = 0/123 (0%) Query 36 VWTGLSLLAVAVAEALWARYVRVKISDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVT 95 +WTGLSLLAVAVAEALWARYVRVKISDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVT Sbjct 1 MWTGLSLLAVAVAEALWARYVRVKISDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVT 60 Query 96 GWWIGVLAYFLPRRSWLRAAAEDTTGTVVAAGSALALVVAALWLQHCCKSPQDPTEHADG 155 GWWIGVLAYFLPRRSWLRAAAEDTTGTVVAAGSALALVVAALWLQHCCKSPQDPTEHADG Sbjct 61 GWWIGVLAYFLPRRSWLRAAAEDTTGTVVAAGSALALVVAALWLQHCCKSPQDPTEHADG 120 Query 156 AES 158 AES Sbjct 121 AES 123 >gi|41406551|ref|NP_959387.1| hypothetical protein MAP0453 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394900|gb|AAS02770.1| hypothetical protein MAP_0453 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336458523|gb|EGO37494.1| Protein of unknown function (DUF3180) [Mycobacterium avium subsp. paratuberculosis S397] Length=158 Score = 231 bits (589), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 138/158 (88%), Positives = 143/158 (91%), Gaps = 0/158 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 MGPTRKRDLTAAVVGAA VGYLLV LYRWFPPITVWTGLSLLAVAV EALWARYVR KI Sbjct 1 MGPTRKRDLTAAVVGAAVVGYLLVQGLYRWFPPITVWTGLSLLAVAVIEALWARYVRTKI 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 +DGEIG GPGWLHPL VARSLMVAKASAWVGALV GWWIGVL YFLPRRSWLRAAAEDT+ Sbjct 61 NDGEIGSGPGWLHPLAVARSLMVAKASAWVGALVLGWWIGVLVYFLPRRSWLRAAAEDTS 120 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGAES 158 G VVAA SALAL+VAALWLQHCCKSP D EH +GAE+ Sbjct 121 GAVVAAVSALALLVAALWLQHCCKSPPDSGEHGEGAET 158 >gi|118463545|ref|YP_879827.1| hypothetical protein MAV_0548 [Mycobacterium avium 104] gi|254773206|ref|ZP_05214722.1| hypothetical protein MaviaA2_00791 [Mycobacterium avium subsp. avium ATCC 25291] gi|118164832|gb|ABK65729.1| conserved hypothetical protein [Mycobacterium avium 104] Length=158 Score = 229 bits (585), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 136/158 (87%), Positives = 143/158 (91%), Gaps = 0/158 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 MGPTRKRDLTAAVVGAA VGYLLV LYRWFPPITVWTGLSLLAVAV EALWARYVR KI Sbjct 1 MGPTRKRDLTAAVVGAAVVGYLLVQGLYRWFPPITVWTGLSLLAVAVIEALWARYVRTKI 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 +DGEIG GPGWLHPL VARSLMVAKASAWVGAL+ GWWIGVL YFLPRRSWLRAA+EDT+ Sbjct 61 NDGEIGSGPGWLHPLAVARSLMVAKASAWVGALMLGWWIGVLVYFLPRRSWLRAASEDTS 120 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGAES 158 G VVAA SALAL+VAALWLQHCCKSP D EH +GAE+ Sbjct 121 GAVVAAVSALALLVAALWLQHCCKSPPDSGEHGEGAET 158 >gi|296166671|ref|ZP_06849096.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897936|gb|EFG77517.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=158 Score = 224 bits (571), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 133/158 (85%), Positives = 141/158 (90%), Gaps = 0/158 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 MGPTRKRDLT AVVGAA VGY LV LYRWFPPITVWTGLSLLAVAVAE LWARYVR KI Sbjct 1 MGPTRKRDLTVAVVGAAVVGYSLVTGLYRWFPPITVWTGLSLLAVAVAEGLWARYVRTKI 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 +DGEIG GPGWLHPL VAR+LMVAKASAWVGAL+ G+W GVL YFLPRRSWLRAAAEDT+ Sbjct 61 NDGEIGVGPGWLHPLAVARTLMVAKASAWVGALMLGFWAGVLVYFLPRRSWLRAAAEDTS 120 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGAES 158 G VVAA SALAL+VAALWLQHCCKSP D TEH +GAE+ Sbjct 121 GAVVAAVSALALLVAALWLQHCCKSPPDQTEHGEGAEN 158 >gi|15827024|ref|NP_301287.1| hypothetical protein ML0227 [Mycobacterium leprae TN] gi|221229502|ref|YP_002502918.1| hypothetical protein MLBr_00227 [Mycobacterium leprae Br4923] gi|3097220|emb|CAA18791.1| hypothetical protein MLCB2548.04c [Mycobacterium leprae] gi|13092571|emb|CAC29735.1| putative membrane protein [Mycobacterium leprae] gi|219932609|emb|CAR70320.1| putative membrane protein [Mycobacterium leprae Br4923] Length=158 Score = 223 bits (567), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 135/158 (86%), Positives = 144/158 (92%), Gaps = 0/158 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 MGPTRKRDLTAA++GAA VGYLLV VLYRWFPPITVWTGLSLLAVA+ EALWARYVR KI Sbjct 1 MGPTRKRDLTAAMIGAAVVGYLLVLVLYRWFPPITVWTGLSLLAVAIPEALWARYVRTKI 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 SDGEIGDGPGWLHPL VA SLMVAKASAWVGALV GWW+GVL YFLPR WLR A +DT+ Sbjct 61 SDGEIGDGPGWLHPLAVAHSLMVAKASAWVGALVLGWWVGVLVYFLPRWPWLRVADKDTS 120 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGAES 158 GTVVAA SALAL+VAALWLQHCCKSPQDPTEH +GAE+ Sbjct 121 GTVVAALSALALLVAALWLQHCCKSPQDPTEHGEGAEN 158 >gi|342862044|ref|ZP_08718688.1| hypothetical protein MCOL_24255 [Mycobacterium colombiense CECT 3035] gi|342130584|gb|EGT83893.1| hypothetical protein MCOL_24255 [Mycobacterium colombiense CECT 3035] Length=158 Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 129/158 (82%), Positives = 142/158 (90%), Gaps = 0/158 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 MGPTRKRDLTAAVV AA VGYLLV LYRWFPPITVWTGLSLLAVA+ EALWARYVR +I Sbjct 1 MGPTRKRDLTAAVVAAAIVGYLLVKGLYRWFPPITVWTGLSLLAVAIVEALWARYVRARI 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 S GEIG GPGWLHPL VARSL+VAKASAWVGA++ GWW+G+L YFLPR+SWLRAAAEDT+ Sbjct 61 SAGEIGSGPGWLHPLAVARSLIVAKASAWVGAVMLGWWVGILVYFLPRKSWLRAAAEDTS 120 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGAES 158 G VVAA SALAL++AALWLQHCCKSP D TEH +GAE+ Sbjct 121 GAVVAAVSALALLIAALWLQHCCKSPPDSTEHGEGAET 158 >gi|183985076|ref|YP_001853367.1| hypothetical protein MMAR_5108 [Mycobacterium marinum M] gi|183178402|gb|ACC43512.1| conserved membrane protein [Mycobacterium marinum M] Length=158 Score = 204 bits (519), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 122/157 (78%), Positives = 134/157 (86%), Gaps = 0/157 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 MGPTR+RDL AA +GAA GY +V VL+R FPP+TVWTGLSLL VA+AEALWAR+VR KI Sbjct 1 MGPTRRRDLAAAAIGAAVAGYPMVLVLFRSFPPLTVWTGLSLLGVAIAEALWARFVRAKI 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 +DGEIGDG G LHPL VARSLMVAKASAWVGALV GWWI VL Y LPRRSWLR AAED T Sbjct 61 NDGEIGDGSGQLHPLAVARSLMVAKASAWVGALVLGWWIAVLVYLLPRRSWLRVAAEDMT 120 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGAE 157 G +VAA SALAL+VAALWLQHCCKSPQ+P E +GAE Sbjct 121 GALVAAASALALIVAALWLQHCCKSPQEPPERGEGAE 157 >gi|118619361|ref|YP_907693.1| hypothetical protein MUL_4187 [Mycobacterium ulcerans Agy99] gi|118571471|gb|ABL06222.1| conserved membrane protein [Mycobacterium ulcerans Agy99] Length=158 Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 121/157 (78%), Positives = 134/157 (86%), Gaps = 0/157 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 MGPTR+RDL AA +GAA GY +V VL+R FPP+TVWTGLSLL VA+AEALWAR+VR KI Sbjct 1 MGPTRRRDLAAAAIGAAVAGYPMVLVLFRSFPPLTVWTGLSLLGVAIAEALWARFVRAKI 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 +DGEIGDG G LHPL VARSLMVAKASAWVGALV GWWI VL Y LPRRSWLR AAED T Sbjct 61 NDGEIGDGSGQLHPLAVARSLMVAKASAWVGALVLGWWIAVLVYLLPRRSWLRVAAEDMT 120 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGAE 157 G +VAA SALAL+VAALWLQ+CCKSPQ+P E +GAE Sbjct 121 GALVAAASALALIVAALWLQNCCKSPQEPPERGEGAE 157 >gi|120406315|ref|YP_956144.1| hypothetical protein Mvan_5367 [Mycobacterium vanbaalenii PYR-1] gi|119959133|gb|ABM16138.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=158 Score = 197 bits (502), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 103/156 (67%), Positives = 120/156 (77%), Gaps = 0/156 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 MGPTR RDL AA A GYLLV V YRWFPPI VWTG+SLL VA A WA YVR +I Sbjct 1 MGPTRTRDLAAAATVTAIAGYLLVHVAYRWFPPIDVWTGVSLLGVAAAVGGWAFYVRARI 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 DG+IG G G LHPL VARS+++AKASAW+G++V GWW+ V+ Y LPRR+ LR AAEDT Sbjct 61 RDGQIGVGQGRLHPLAVARSVVIAKASAWMGSVVFGWWLAVVVYLLPRRATLRVAAEDTP 120 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGA 156 G VVA ALALVVAA+WLQHCC+SP+D +E+AD A Sbjct 121 GAVVAGLCALALVVAAMWLQHCCRSPEDQSENADAA 156 >gi|145222013|ref|YP_001132691.1| hypothetical protein Mflv_1421 [Mycobacterium gilvum PYR-GCK] gi|145214499|gb|ABP43903.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=158 Score = 186 bits (472), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 103/156 (67%), Positives = 119/156 (77%), Gaps = 0/156 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 MG TRKRDL AAV AA GYLL+ V+YR FPPITVWTG+SLL VAVA A WA VR +I Sbjct 1 MGLTRKRDLAAAVAAAAIAGYLLMYVVYRVFPPITVWTGMSLLGVAVALAGWAFLVRARI 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 DG IG G G LHPL VARS+++AKASAW+G++V GWW+ V+ Y LPRR+ LR AAEDT Sbjct 61 RDGRIGVGAGRLHPLAVARSVVIAKASAWMGSVVLGWWLAVVIYLLPRRASLRVAAEDTA 120 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGA 156 G V+AA ALALV+AALWLQ+CC SP D AD A Sbjct 121 GAVIAALCALALVIAALWLQYCCTSPDDSAPEADPA 156 >gi|315446247|ref|YP_004079126.1| hypothetical protein Mspyr1_47500 [Mycobacterium sp. Spyr1] gi|315264550|gb|ADU01292.1| hypothetical protein Mspyr1_47500 [Mycobacterium sp. Spyr1] Length=158 Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 104/156 (67%), Positives = 118/156 (76%), Gaps = 0/156 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 MG TRKRDL AAV AA GYLL+ V+YR FPPITVWTG+SLL VAVA A WA VR +I Sbjct 1 MGLTRKRDLAAAVAAAAIAGYLLMYVVYRVFPPITVWTGMSLLGVAVALAGWAFLVRARI 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 DG IG G G LHPL VARS+++AKASAW+G++V GWW+ V+ Y LPRR LR AAEDT Sbjct 61 RDGRIGVGAGRLHPLAVARSVVIAKASAWMGSVVLGWWLAVVIYLLPRRGSLRVAAEDTA 120 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGA 156 G V+AA ALALVVAALWLQ+CC SP D AD A Sbjct 121 GAVIAALCALALVVAALWLQYCCTSPDDSAPEADPA 156 >gi|108801728|ref|YP_641925.1| hypothetical protein Mmcs_4765 [Mycobacterium sp. MCS] gi|119870879|ref|YP_940831.1| hypothetical protein Mkms_4851 [Mycobacterium sp. KMS] gi|108772147|gb|ABG10869.1| putative conserved secreted protein [Mycobacterium sp. MCS] gi|119696968|gb|ABL94041.1| putative conserved secreted protein [Mycobacterium sp. KMS] Length=159 Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 99/145 (69%), Positives = 111/145 (77%), Gaps = 1/145 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLY-RWFPPITVWTGLSLLAVAVAEALWARYVRVK 59 MGPTRKRDL AAV+ A VGYL + Y R+FPPI++WTGLSLL VAVA A W VR K Sbjct 1 MGPTRKRDLAAAVLIAGIVGYLAALLAYPRYFPPISLWTGLSLLGVAVAIAAWGVNVRNK 60 Query 60 ISDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDT 119 I DGEIGDGPG LHPL VARS+++AKASAWVGA V GWW GVL LP+R LRAA ED Sbjct 61 IRDGEIGDGPGRLHPLAVARSVVIAKASAWVGAPVLGWWAGVLVQILPQRGALRAAGEDV 120 Query 120 TGTVVAAGSALALVVAALWLQHCCK 144 G V+AA SALAL +A LWLQ+CCK Sbjct 121 PGVVIAAASALALTIAGLWLQNCCK 145 >gi|126437715|ref|YP_001073406.1| hypothetical protein Mjls_5151 [Mycobacterium sp. JLS] gi|126237515|gb|ABO00916.1| putative conserved secreted protein [Mycobacterium sp. JLS] Length=159 Score = 184 bits (467), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 99/145 (69%), Positives = 111/145 (77%), Gaps = 1/145 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLY-RWFPPITVWTGLSLLAVAVAEALWARYVRVK 59 MGPTRKRDL AAV+ A VGYL + Y R+FPPI++WTGLSLL VAVA A W VR K Sbjct 1 MGPTRKRDLAAAVLIAGIVGYLAALLAYPRYFPPISLWTGLSLLGVAVAIAAWGVNVRNK 60 Query 60 ISDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDT 119 I DGEIGDGPG LHPL VARS+++AKASAWVGA V GWW GVL LP+R LRAA ED Sbjct 61 IRDGEIGDGPGRLHPLAVARSVVIAKASAWVGAPVLGWWAGVLVQVLPQRGALRAAGEDV 120 Query 120 TGTVVAAGSALALVVAALWLQHCCK 144 G V+AA SALAL +A LWLQ+CCK Sbjct 121 PGVVIAAASALALTIAGLWLQNCCK 145 >gi|118473258|ref|YP_890321.1| hypothetical protein MSMEG_6100 [Mycobacterium smegmatis str. MC2 155] gi|118174545|gb|ABK75441.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=158 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 106/154 (69%), Positives = 119/154 (78%), Gaps = 0/154 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 MGPTRKRDL A V AA + YLL+ LYRWFPPITVWTGLSLL VA EA W YVR KI Sbjct 1 MGPTRKRDLVGAAVAAALLSYLLIHALYRWFPPITVWTGLSLLGVAAFEAGWGFYVRAKI 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 +DG+IG G G L PL VARS+++AKASAWVGALV GWW+GVL Y LPRR+ +R A EDT Sbjct 61 NDGQIGVGAGRLDPLTVARSVVIAKASAWVGALVAGWWVGVLVYLLPRRTTIRVAGEDTP 120 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHAD 154 G VVAA ALAL +A LWLQHCCKSP++P E D Sbjct 121 GVVVAALCALALAIAGLWLQHCCKSPEEPPEDGD 154 >gi|333992534|ref|YP_004525148.1| hypothetical protein JDM601_3894 [Mycobacterium sp. JDM601] gi|333488502|gb|AEF37894.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=149 Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 98/142 (70%), Positives = 115/142 (81%), Gaps = 0/142 (0%) Query 13 VVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKISDGEIGDGPGWL 72 +V AA + YL V +LYRWFPPIT WTG+SLL A+AEA W RYVR KI DG+IG GPGWL Sbjct 1 MVAAAVLSYLAVPLLYRWFPPITAWTGVSLLVAAIAEAAWGRYVREKIDDGQIGVGPGWL 60 Query 73 HPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTTGTVVAAGSALAL 132 HPL VAR+++VAKASAW+GALV G+W+GVL Y LPRR+ L AAEDT G VVAA SALAL Sbjct 61 HPLAVARTVVVAKASAWMGALVLGFWLGVLGYLLPRRAALHVAAEDTGGAVVAAVSALAL 120 Query 133 VVAALWLQHCCKSPQDPTEHAD 154 ++AALWLQ+CCKSPQDP + Sbjct 121 LIAALWLQNCCKSPQDPGQSGQ 142 >gi|169627642|ref|YP_001701291.1| hypothetical protein MAB_0538 [Mycobacterium abscessus ATCC 19977] gi|169239609|emb|CAM60637.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=155 Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 90/149 (61%), Positives = 106/149 (72%), Gaps = 0/149 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 MG TR RDL A V A Y V+ Y PPI + G+SLL +AVAEA WA YVR ++ Sbjct 1 MGTTRFRDLLVAGVVTAIFCYFFVSAAYGSLPPIPLLAGVSLLVLAVAEAGWAFYVRNRV 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 +DG+IG G G L L VARS++VAKASAW+G L+TGWW+ +L Y LPRR+ L AAA DT Sbjct 61 NDGQIGVGAGRLPALAVARSVVVAKASAWLGTLMTGWWMAMLVYILPRRAHLAAAAADTL 120 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDP 149 G V+A G ALALVVA LWLQHCCKSP DP Sbjct 121 GVVIATGCALALVVAGLWLQHCCKSPPDP 149 >gi|333917994|ref|YP_004491575.1| hypothetical protein AS9A_0316 [Amycolicicoccus subflavus DQS3-9A1] gi|333480215|gb|AEF38775.1| hypothetical protein AS9A_0316 [Amycolicicoccus subflavus DQS3-9A1] Length=166 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 63/152 (42%), Positives = 84/152 (56%), Gaps = 0/152 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 M TR RDL + A +LL Y PPI + G SL +AVAE + +R +I Sbjct 1 MNATRVRDLAVIGIVALIASWLLAEAFYGSLPPIRLLVGASLYPIAVAEVAFGFAIRNRI 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 + +G G LHP+ +AR++ +AKASA VGA G W G+L P R+ +RAA ED Sbjct 61 ASHRVGMARGQLHPITIARAVALAKASALVGAASAGVWAGLLLVIAPDRAIVRAAMEDLP 120 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEH 152 G V ALAL AALWL+ CC++P D + Sbjct 121 GVTVGFLGALALTGAALWLEQCCRTPDDEEDE 152 >gi|343924373|ref|ZP_08763923.1| hypothetical protein GOALK_015_00190 [Gordonia alkanivorans NBRC 16433] gi|343765705|dbj|GAA10849.1| hypothetical protein GOALK_015_00190 [Gordonia alkanivorans NBRC 16433] Length=171 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 59/154 (39%), Positives = 89/154 (58%), Gaps = 1/154 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 +GPTR RDL A ++LV Y FPP+ + G+ L +A E + A VR ++ Sbjct 18 LGPTRLRDLVVIAAVTAIAAWILVRYNYNDFPPLPLLAGIVLYVLAALEVVIAFVVRSRV 77 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 ++G G LHPL AR L +AKASA +GA+ G W G+L + L +++ + AA +D Sbjct 78 ESRDVGRARGQLHPLTAARVLALAKASAILGAIAVGVWTGLLVFLLGQQN-VTAADQDRP 136 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHAD 154 G +V + LV AA+WL++CC++P+DP D Sbjct 137 GAIVGLIGGVLLVCAAMWLEYCCRAPEDPPAVGD 170 >gi|111021384|ref|YP_704356.1| hypothetical protein RHA1_ro04412 [Rhodococcus jostii RHA1] gi|110820914|gb|ABG96198.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=163 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 77/152 (51%), Positives = 96/152 (64%), Gaps = 0/152 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 M PTR DL A A ++LV V Y FPPI V+ G SL VA+ E + A VR ++ Sbjct 9 MKPTRIWDLLFLAALAVAATWILVRVFYGSFPPIPVYAGASLYPVALIEVVLAFMVRSRV 68 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 S+ ++GDGP LHP+ AR +AKASA VGA G W G L Y LP+RS LRAA DT Sbjct 69 SNHQVGDGPRQLHPITAARVAALAKASALVGAATAGVWGGFLLYLLPQRSVLRAAVSDTP 128 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEH 152 G V +ALALV AALWL+HCC++P DP++ Sbjct 129 GAWVGLVAALALVGAALWLEHCCRTPDDPSDE 160 >gi|296138300|ref|YP_003645543.1| hypothetical protein Tpau_0564 [Tsukamurella paurometabola DSM 20162] gi|296026434|gb|ADG77204.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=156 Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 57/145 (40%), Positives = 87/145 (60%), Gaps = 3/145 (2%) Query 8 DLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKISDGEIGD 67 +L V+G Y+LV L PPI +W G L +A A+ A+ +R +++ G++G Sbjct 8 ELVVIVLGVGLGTYILVKDL---VPPIPIWAGAMLYGIAAADLWIAQLIRSRLAKGQVGM 64 Query 68 GPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTTGTVVAAG 127 GPG LHP+ VAR++ +AKASA++GA+ G++ G LA+ L + S L A D G + Sbjct 65 GPGRLHPIAVARAVALAKASAYLGAVSLGFFGGALAFLLTKGSELTATHADRPGAWIGLV 124 Query 128 SALALVVAALWLQHCCKSPQDPTEH 152 A L+ +ALWL+ CC++P DP E Sbjct 125 GAGLLLASALWLEQCCRTPDDPDEQ 149 >gi|226363738|ref|YP_002781520.1| hypothetical protein ROP_43280 [Rhodococcus opacus B4] gi|226242227|dbj|BAH52575.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=163 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 75/152 (50%), Positives = 97/152 (64%), Gaps = 0/152 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 M PTR DL A A ++LV V Y FPPI V+ G SL VA+ E + A VR ++ Sbjct 9 MKPTRIWDLLFLAALAVAATWILVRVFYGSFPPIPVYAGASLYPVALIEVVLAFMVRSRV 68 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 ++ ++GDGP LHP+ AR +AKASA VGA G W G L Y LP++S LRAAA D+ Sbjct 69 TNHQVGDGPRQLHPITAARVAALAKASALVGAATAGVWGGFLLYLLPQQSVLRAAASDSP 128 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEH 152 G V +ALALV AALWL+HCC++P DP++ Sbjct 129 GAWVGLVAALALVGAALWLEHCCRTPDDPSDE 160 >gi|229494125|ref|ZP_04387888.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229318487|gb|EEN84345.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=162 Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 76/154 (50%), Positives = 103/154 (67%), Gaps = 1/154 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 + PTR +L AA ++L+ V Y PPI V+ G SL VAVAEA++A +R ++ Sbjct 8 LKPTRISELAVLAAVAAVATWILIRVFYGSMPPIPVYAGASLYFVAVAEAVFAFVIRSRV 67 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 + ++GDG LHP+ AR+L +AKASA VG+ G W+GVL Y +P+RS L+AAA DT Sbjct 68 KNRQVGDGLRQLHPITAARALALAKASALVGSATVGVWVGVLVYLIPQRSVLQAAASDTP 127 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQD-PTEHA 153 G V G+A+ALV AALWL+HCCK+P+D P E A Sbjct 128 GAWVGLGAAIALVAAALWLEHCCKTPEDTPDEPA 161 >gi|226304119|ref|YP_002764077.1| hypothetical protein RER_06300 [Rhodococcus erythropolis PR4] gi|226183234|dbj|BAH31338.1| conserved hypothetical membrane protein [Rhodococcus erythropolis PR4] Length=162 Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 76/154 (50%), Positives = 103/154 (67%), Gaps = 1/154 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 + PTR +L AA ++L+ V Y PPI V+ G SL VAVAEA++A +R ++ Sbjct 8 LKPTRISELVVLAAVAAVATWILIRVFYGSMPPIPVYAGASLYFVAVAEAVFAFVIRSRV 67 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 + ++GDG LHP+ AR+L +AKASA VG+ G W+GVL Y +P+RS L+AAA DT Sbjct 68 KNRQVGDGLRQLHPITAARALALAKASALVGSATVGVWVGVLVYLIPQRSVLQAAASDTP 127 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQD-PTEHA 153 G V G+A+ALV AALWL+HCCK+P+D P E A Sbjct 128 GAWVGLGAAIALVAAALWLEHCCKTPEDTPDEPA 161 >gi|312138057|ref|YP_004005393.1| integral membrane protein [Rhodococcus equi 103S] gi|311887396|emb|CBH46708.1| putative integral membrane protein [Rhodococcus equi 103S] Length=156 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 73/154 (48%), Positives = 97/154 (63%), Gaps = 1/154 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 M PTR DL + + AA +LL+ V Y PPI V+ G SL VA+ E + A VR ++ Sbjct 2 MKPTRIWDLLSLSLLAAVATWLLLRVAYGSLPPIPVYAGASLYPVALIETILAFVVRSRV 61 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 + IGDGP LHP+ AR++ +AKASA VGA G W G L + P+RS LRAA D++ Sbjct 62 REHAIGDGPRQLHPITAARAVALAKASALVGAASAGVWAGFLVFLWPQRSHLRAAVSDSS 121 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQD-PTEHA 153 G +V +A+ LV AALWL+HCC++P D P E A Sbjct 122 GVIVGLIAAVLLVAAALWLEHCCRTPDDHPDEPA 155 >gi|325675042|ref|ZP_08154729.1| hypothetical protein HMPREF0724_12511 [Rhodococcus equi ATCC 33707] gi|325554628|gb|EGD24303.1| hypothetical protein HMPREF0724_12511 [Rhodococcus equi ATCC 33707] Length=155 Score = 97.1 bits (240), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 73/154 (48%), Positives = 97/154 (63%), Gaps = 1/154 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 M PTR DL + + AA +LL+ V Y PPI V+ G SL VA+ E + A VR ++ Sbjct 1 MKPTRIWDLLSLSLLAAVATWLLLRVAYGSLPPIPVYAGASLYPVALIETILAFVVRSRV 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 + IGDGP LHP+ AR++ +AKASA VGA G W G L + P+RS LRAA D++ Sbjct 61 REHAIGDGPRQLHPITAARAVALAKASALVGAASAGVWAGFLVFLWPQRSHLRAAVSDSS 120 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQD-PTEHA 153 G +V +A+ LV AALWL+HCC++P D P E A Sbjct 121 GVIVGLIAAVLLVAAALWLEHCCRTPDDHPDEPA 154 >gi|326384082|ref|ZP_08205765.1| hypothetical protein SCNU_14154 [Gordonia neofelifaecis NRRL B-59395] gi|326197242|gb|EGD54433.1| hypothetical protein SCNU_14154 [Gordonia neofelifaecis NRRL B-59395] Length=184 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 66/158 (42%), Positives = 92/158 (59%), Gaps = 3/158 (1%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 +GPTR RDL V A ++L+ Y FP + +G+SL VA E + VR ++ Sbjct 21 LGPTRIRDLMVVAVVVAIALWILIHYNYGAFPSLPWLSGISLYVVAALEVVIGFIVRKRV 80 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 ++ EIG G G LHP+ AR + +AKASA +GA+ G W GVL + L + L AA D Sbjct 81 AEKEIGRGKGQLHPINAARLVALAKASAILGAVAAGGWAGVLVFLL-QNGILEAARADRI 139 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADGAES 158 G +V + L AALWL+HCC++P DP+ AD AE+ Sbjct 140 GAIVGLVGGIVLAAAALWLEHCCRAPDDPS--ADNAET 175 >gi|331699838|ref|YP_004336077.1| hypothetical protein Psed_6122 [Pseudonocardia dioxanivorans CB1190] gi|326954527|gb|AEA28224.1| hypothetical protein Psed_6122 [Pseudonocardia dioxanivorans CB1190] Length=159 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 59/155 (39%), Positives = 81/155 (53%), Gaps = 3/155 (1%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 M PTR RDL A + AA V +LLV Y P + G++L + + E + +R +I Sbjct 1 MTPTRPRDLVIAGLVAAVVAHLLVRFTYSALPTFPLTAGITLAVLGIVEVVAGNLLRARI 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 E G + L AR+++VAKAS+ GA+V G W G+L Y LP + AA D Sbjct 61 ---EHRPGTRPVEALAAARAVIVAKASSLGGAVVAGLWAGLLVYVLPMVGDVVAAGSDAR 117 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHADG 155 V SAL LV LWL+ CC++P DP + G Sbjct 118 AAGVGLVSALVLVAGGLWLERCCRTPDDPRDEEAG 152 >gi|302530783|ref|ZP_07283125.1| hypothetical protein SSMG_07165 [Streptomyces sp. AA4] gi|302439678|gb|EFL11494.1| hypothetical protein SSMG_07165 [Streptomyces sp. AA4] Length=150 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/156 (38%), Positives = 82/156 (53%), Gaps = 7/156 (4%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 M TR RDL A V AV Y+L Y P + + G++ +AVAEA A +R +I Sbjct 1 MHFTRSRDLVVAAVLGLAVVYVLFQAAYGDLPRLPLLAGVTFAVLAVAEAGLALSIRSRI 60 Query 61 SDGEI-GDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDT 119 G + G+ G +AR++ +AKAS+ GA + G W+ Y PRR L AA D+ Sbjct 61 KSGRVHGNAVG------IARAVALAKASSLAGAFLGGGWLAAFLYAFPRRDELVAAVSDS 114 Query 120 TGTVVAAGSALALVVAALWLQHCCKSPQDPTEHADG 155 +V A S+ LV A LWL+HCC++P + G Sbjct 115 KSAIVGAVSSALLVAAGLWLEHCCRTPPEDRRTTTG 150 >gi|262203867|ref|YP_003275075.1| hypothetical protein Gbro_4012 [Gordonia bronchialis DSM 43247] gi|262087214|gb|ACY23182.1| hypothetical protein Gbro_4012 [Gordonia bronchialis DSM 43247] Length=158 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/151 (42%), Positives = 89/151 (59%), Gaps = 3/151 (1%) Query 1 MGPTRKRDLTAAVVGAAAVG-YLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVK 59 MGPTR RDL + G A+ ++LV Y FPP+ + G+ L +A E + A VR + Sbjct 1 MGPTRVRDLL-IIAGVVAIAVWILVRYNYSEFPPLPLLAGVVLYVLAALEVVIAFVVRSR 59 Query 60 ISDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDT 119 ++D ++G G LHPL AR L +AKASA + A+ G W+G+L Y L + L AA D Sbjct 60 VADRDVGAARGQLHPLTAARVLALAKASAILAAIAIGVWVGLLVYLLNQHD-LAAADHDK 118 Query 120 TGTVVAAGSALALVVAALWLQHCCKSPQDPT 150 G ++ + L AALWL++CC++P DPT Sbjct 119 PGAIIGLVGGVLLAGAALWLEYCCRAPDDPT 149 >gi|257057510|ref|YP_003135342.1| hypothetical protein Svir_35590 [Saccharomonospora viridis DSM 43017] gi|256587382|gb|ACU98515.1| hypothetical protein Svir_35590 [Saccharomonospora viridis DSM 43017] Length=155 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 56/152 (37%), Positives = 85/152 (56%), Gaps = 14/152 (9%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRW----FPPITVWTGLSLLAVAVAEALWARYV 56 M TR RDL A VG+ L L+R+ P + G++LL +A E A + Sbjct 1 MHFTRARDLLVA----GLVGFGLTFPLFRFAFGELPSLPTLAGVTLLVLACVELALAFVI 56 Query 57 RVKISDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAA 116 R +I ++ G L +AR++ +AKAS+ +G+L+ G W+G L+Y PR S + AA+ Sbjct 57 RSRIRSHQVVTG------LWIARAVALAKASSLLGSLMAGAWLGALSYLAPRSSEIVAAS 110 Query 117 EDTTGTVVAAGSALALVVAALWLQHCCKSPQD 148 ED +V A AL+ AALWL+HCC++P + Sbjct 111 EDLPAAIVGVCCAAALIGAALWLEHCCRTPGN 142 >gi|300790546|ref|YP_003770837.1| hypothetical protein AMED_8742 [Amycolatopsis mediterranei U32] gi|299800060|gb|ADJ50435.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340532233|gb|AEK47438.1| hypothetical protein RAM_44855 [Amycolatopsis mediterranei S699] Length=153 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 63/148 (43%), Positives = 84/148 (57%), Gaps = 6/148 (4%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 M TR RDL A + +GYLL Y P + + G++ +AV E + A VR +I Sbjct 1 MHFTRPRDLVVAGLLGLGLGYLLFQTAYGSLPQLPLLAGVTFAVLAVIEVVLAFSVRSRI 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 +G + G VARS+ +AKAS+ GA + G W+ LAY PRR L AA DT Sbjct 61 KNGRVVGAIG------VARSVALAKASSLAGAFMAGAWLAALAYLFPRRDELVAAVLDTR 114 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQD 148 VV A S+ ALV AALWL+HCC++P+D Sbjct 115 AAVVGAVSSAALVAAALWLEHCCRTPRD 142 >gi|54022367|ref|YP_116609.1| hypothetical protein nfa4030 [Nocardia farcinica IFM 10152] gi|54013875|dbj|BAD55245.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=157 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 62/152 (41%), Positives = 92/152 (61%), Gaps = 1/152 (0%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 + PT+ DL A V+ AA + + Y PPI+V+ G SL VA E + A +R ++ Sbjct 3 LKPTKALDLVANVLIAALLAWAATRFAYGSLPPISVFAGASLYPVAALEVVLAFVIRARV 62 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 + E+G G LHP+ AR++ +AKAS VG++ G W+G L + P+R L AAA D Sbjct 63 RNEEVGTGRK-LHPITAARAVALAKASVQVGSIAAGIWLGFLCWVFPQRGTLTAAAADAP 121 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEH 152 G +V + +ALV AALWL++CC++P DPT+ Sbjct 122 GAIVGLSAGVALVAAALWLEYCCRAPDDPTDE 153 >gi|225022117|ref|ZP_03711309.1| hypothetical protein CORMATOL_02150 [Corynebacterium matruchotii ATCC 33806] gi|305680427|ref|ZP_07403235.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] gi|224945050|gb|EEG26259.1| hypothetical protein CORMATOL_02150 [Corynebacterium matruchotii ATCC 33806] gi|305659958|gb|EFM49457.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] Length=155 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 4/150 (2%) Query 5 RKRDLTAAV-VGAAAVGYLLVAV--LYRWFPPITVWTGLSLLAVAVAEALWARYVRVKIS 61 + +TA V VG L+A+ LY + + GL+LL +AV + A V+ +I Sbjct 2 KTTSITALVGVGGFCAAATLIAIQNLYNVMSTVPISVGLTLLIMAVLCCMLAWRVKGQIK 61 Query 62 DGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTTG 121 D IG L P VA L++ K SAW GA+ +G ++G+ Y +PR L AAA D G Sbjct 62 DNRIGFDRSQLEPTRVATFLIIGKTSAWTGAIFSGIYVGMGVYVIPRMGDLVAAANDAPG 121 Query 122 TVVAAGSALALVVAALWLQHCCKSPQDPTE 151 + AA + L A LWL+ C +P PT+ Sbjct 122 VITAAIGGVVLCAAGLWLERACAAPP-PTD 150 >gi|38234560|ref|NP_940327.1| hypothetical protein DIP1996 [Corynebacterium diphtheriae NCTC 13129] gi|38200823|emb|CAE50527.1| Putative membrane protein [Corynebacterium diphtheriae] Length=155 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/141 (40%), Positives = 71/141 (51%), Gaps = 0/141 (0%) Query 9 LTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKISDGEIGDG 68 L A V AA LLVA Y + V L L A+A+ L A VR +I D +IG Sbjct 9 LIALGVFVAAASLLLVARFYGSMSSVPVSVALMLWAMAILCVLLAVRVRGRIRDEKIGQD 68 Query 69 PGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTTGTVVAAGS 128 L+P+ A L+V K SAW GAL G + G+ Y + + S L AAA+DT V AA Sbjct 69 RSQLNPVTAAEFLIVGKTSAWTGALFGGAYTGMACYVVAKYSELAAAAQDTPVVVAAALG 128 Query 129 ALALVVAALWLQHCCKSPQDP 149 + + A WL+ CC P P Sbjct 129 GVGMSAAGYWLEKCCTVPPPP 149 >gi|256374473|ref|YP_003098133.1| hypothetical protein Amir_0318 [Actinosynnema mirum DSM 43827] gi|255918776|gb|ACU34287.1| hypothetical protein Amir_0318 [Actinosynnema mirum DSM 43827] Length=150 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/150 (38%), Positives = 82/150 (55%), Gaps = 3/150 (2%) Query 4 TRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKISDG 63 T+ RDL AA +G+AA+ +LL+ + Y PP+ GL LL +A + A +R +I Sbjct 4 TKGRDLLAAGLGSAALVFLLLKLSYSGLPPLPRLAGLVLLVIAAIDLGLAVSLRARILRK 63 Query 64 EIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTTGTV 123 G + PL AR++ +AKAS+ +GA++ G W VL + P R AA D T V Sbjct 64 P---GAEPVQPLTAARAVALAKASSVLGAIMAGAWGAVLLHVAPARGRFPAADNDLTSAV 120 Query 124 VAAGSALALVVAALWLQHCCKSPQDPTEHA 153 V A AL + LWL+ CC++P +P A Sbjct 121 VGLVCAAALTASGLWLERCCRTPDEPERRA 150 >gi|117927418|ref|YP_871969.1| hypothetical protein Acel_0209 [Acidothermus cellulolyticus 11B] gi|117647881|gb|ABK51983.1| conserved hypothetical protein [Acidothermus cellulolyticus 11B] Length=156 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 56/154 (37%), Positives = 87/154 (57%), Gaps = 10/154 (6%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 M PTR L + AA + LV +Y P ++++ ++L +A+AE +A VR +I Sbjct 1 MKPTRVPILVGLAIVVAAATWALVGRIYDSLPTLSLYAPIALGVLALAEVAFAISVRRRI 60 Query 61 SDGEIGDGPGW-LHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFL--PRRSWLRAAAE 117 PG+ + P+ V+R +++AKASA+ GA++ G + G L Y L P R L A Sbjct 61 RHPT----PGYRIDPIFVSRLVVLAKASAYTGAILAGVYAGFLGYTLTAPGRGQLSA--- 113 Query 118 DTTGTVVAAGSALALVVAALWLQHCCKSPQDPTE 151 D + +AAG ALVVAAL+L++ C+ P+ P E Sbjct 114 DARTSAIAAGLNAALVVAALFLENGCRVPRPPDE 147 >gi|237786210|ref|YP_002906915.1| hypothetical protein ckrop_1647 [Corynebacterium kroppenstedtii DSM 44385] gi|237759122|gb|ACR18372.1| putative membrane protein [Corynebacterium kroppenstedtii DSM 44385] Length=162 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 44/148 (30%), Positives = 74/148 (50%), Gaps = 2/148 (1%) Query 10 TAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKISDGEIGDGP 69 TA +VG A ++L+ Y P + + L+ +AV + +R +I+D E+G Sbjct 12 TALIVGFGA--FMLIWRFYGSIPGFNLTLPVILIVLAVICTIAGFIIRKRIADNEVGQDR 69 Query 70 GWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTTGTVVAAGSA 129 +HPL +AR ++ ++AW G++ G + G+ Y S L AA EDT VV +A Sbjct 70 SQIHPLTIARCFVMGTSTAWFGSICAGSYAGIALYLWINYSRLIAAREDTPAVVVGLIAA 129 Query 130 LALVVAALWLQHCCKSPQDPTEHADGAE 157 + + + LWL+ CC +P E + Sbjct 130 ILVAASGLWLERCCGAPPPNDEDTQSSN 157 >gi|25029093|ref|NP_739147.1| hypothetical protein CE2537 [Corynebacterium efficiens YS-314] gi|259505910|ref|ZP_05748812.1| membrane protein [Corynebacterium efficiens YS-314] gi|23494380|dbj|BAC19347.1| hypothetical protein [Corynebacterium efficiens YS-314] gi|259166514|gb|EEW51068.1| membrane protein [Corynebacterium efficiens YS-314] Length=155 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 46/130 (36%), Positives = 72/130 (56%), Gaps = 0/130 (0%) Query 17 AAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKISDGEIGDGPGWLHPLV 76 AAV +L Y I V +SL +AV VR ++ +G IG ++PL Sbjct 17 AAVSAILTWRFYGSMSTIPVAISISLWVMAVICVFAGFKVRGRMEEGLIGQDRSQMNPLT 76 Query 77 VARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTTGTVVAAGSALALVVAA 136 +A+ ++V +A AW GA+V G ++G+ +Y +PR L AA+ED G + +A +AL VA Sbjct 77 IAQLMLVGRAGAWTGAIVGGIYVGISSYVIPRVGDLIAASEDLPGALASALGGIALAVAG 136 Query 137 LWLQHCCKSP 146 L+L+ C+ P Sbjct 137 LYLERSCEVP 146 >gi|134097015|ref|YP_001102676.1| hypothetical protein SACE_0402 [Saccharopolyspora erythraea NRRL 2338] gi|291006239|ref|ZP_06564212.1| hypothetical protein SeryN2_17113 [Saccharopolyspora erythraea NRRL 2338] gi|133909638|emb|CAL99750.1| hypothetical protein SACE_0402 [Saccharopolyspora erythraea NRRL 2338] Length=154 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 49/130 (38%), Positives = 78/130 (60%), Gaps = 3/130 (2%) Query 28 YRWFPPITVWTGLSLLAVAVAEALWARYVRVKISDGEIGDGPGWLHPLVVARSLMVAKAS 87 Y P + + G +LL +A+ + ++A +R ++ + G P + PL AR++ +AKAS Sbjct 28 YGVLPQLPTFAGATLLLIALIDVVFALTMRPRLKR-KPGTEP--VDPLTAARAVALAKAS 84 Query 88 AWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTTGTVVAAGSALALVVAALWLQHCCKSPQ 147 + GA++ G W+G+LAY LP R ++AA DT V+ SA ALV A LWL+HC ++P Sbjct 85 SLAGAIMGGVWVGLLAYLLPERGTVQAAGADTVAAVIGLVSAAALVAAGLWLEHCLRNPD 144 Query 148 DPTEHADGAE 157 +P E D + Sbjct 145 EPEEPLDDED 154 >gi|86743079|ref|YP_483479.1| hypothetical protein Francci3_4404 [Frankia sp. CcI3] gi|86569941|gb|ABD13750.1| conserved hypothetical protein [Frankia sp. CcI3] Length=145 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/144 (35%), Positives = 70/144 (49%), Gaps = 3/144 (2%) Query 1 MGPTRKRDLTAAVVGAAAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKI 60 M PTR RDL A V +GYLL+ YR P + +S+L + E A R ++ Sbjct 1 MRPTRARDLIAVAVAFGVLGYLLLWWAYRSIPTLPRTASVSVLMIGAIELQVASLTRRRL 60 Query 61 SDGEIGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 +G G P + PL VAR +AKAS+ VGA + G W GV Y +PR A D Sbjct 61 -EGRPGTRP--ILPLTVARLAALAKASSVVGAALAGIWAGVFGYTMPRTGEFPTAGGDAL 117 Query 121 GTVVAAGSALALVVAALWLQHCCK 144 + +A+ L+ L L+ C+ Sbjct 118 TAGLGLAAAMVLLTGGLILERVCR 141 >gi|227505946|ref|ZP_03935995.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] gi|227197468|gb|EEI77516.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] Length=154 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 49/133 (37%), Positives = 67/133 (51%), Gaps = 1/133 (0%) Query 17 AAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKISDGE-IGDGPGWLHPL 75 AA +L Y I +SL A+A+ A VR D IG L+PL Sbjct 17 AAAAAILTTRFYGSMLAIPATVSISLWAMALVCAFLTWKVRSAKEDEHGIGLDKSQLNPL 76 Query 76 VVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTTGTVVAAGSALALVVA 135 +A+ L+V KASAW GA+V G + G+L Y PR L AA+ D G + +A +AL VA Sbjct 77 TIAQFLLVGKASAWTGAIVGGAYAGMLVYVFPRAGELVAASSDLAGVLTSALGGVALSVA 136 Query 136 ALWLQHCCKSPQD 148 + L+ C+ P D Sbjct 137 GVVLERHCEVPPD 149 >gi|227834061|ref|YP_002835768.1| hypothetical protein cauri_2239 [Corynebacterium aurimucosum ATCC 700975] gi|262183453|ref|ZP_06042874.1| hypothetical protein CaurA7_05624 [Corynebacterium aurimucosum ATCC 700975] gi|227455077|gb|ACP33830.1| putative membrane protein [Corynebacterium aurimucosum ATCC 700975] Length=157 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/154 (36%), Positives = 76/154 (50%), Gaps = 6/154 (3%) Query 6 KRDLTAAVVGAA----AVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKIS 61 KR A+VG A A +L Y I +SL A+AV + VR + Sbjct 2 KRTSIGALVGVALFVAAAAAILTTRFYGSMLAIPATVSISLWAMAVVCGVLTLKVRNAKN 61 Query 62 DGE-IGDGPGWLHPLVVARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTT 120 D IG L+P+ +A+ L+V KASAW GA+V G + G+ Y +PR L AAA D Sbjct 62 DEHGIGLDNSQLNPMTIAQFLLVGKASAWTGAIVGGAYAGIAVYVVPRAGELVAAAGDLA 121 Query 121 GTVVAAGSALALVVAALWLQHCCKSPQDPTEHAD 154 G V +A A+ VA + L+ C+ P PT+ A Sbjct 122 GVVSSALGGAAMCVAGVVLERHCEVPP-PTDAAQ 154 >gi|306836922|ref|ZP_07469875.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] gi|304567193|gb|EFM42805.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] Length=157 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/117 (35%), Positives = 62/117 (53%), Gaps = 1/117 (0%) Query 33 PITVWTGLSLLAVAVAEALWARYVRVKISDGEIGDGPGWLHPLVVARSLMVAKASAWVGA 92 P+TV L L+ V W + + D IG L+P+ +A+ ++V KASAW GA Sbjct 35 PVTVSATLWLMVVVCLGLTW-KVDKATDEDHGIGLDNSQLNPMTIAQFMLVGKASAWTGA 93 Query 93 LVTGWWIGVLAYFLPRRSWLRAAAEDTTGTVVAAGSALALVVAALWLQHCCKSPQDP 149 +V G + GV Y +P L AA++D G + +A +A+ A L L+ C++P P Sbjct 94 IVGGLYAGVAVYVIPNAGTLVAASDDLVGVLASAIGGVAMSAAGLRLERHCETPPPP 150 >gi|19553885|ref|NP_601887.1| hypothetical protein NCgl2598 [Corynebacterium glutamicum ATCC 13032] gi|145296687|ref|YP_001139508.1| hypothetical protein cgR_2592 [Corynebacterium glutamicum R] gi|21325463|dbj|BAC00085.1| Hypothetical membrane protein [Corynebacterium glutamicum ATCC 13032] gi|140846607|dbj|BAF55606.1| hypothetical protein [Corynebacterium glutamicum R] gi|344046246|gb|EGV41912.1| hypothetical protein CgS9114_00805 [Corynebacterium glutamicum S9114] Length=155 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/137 (29%), Positives = 69/137 (51%), Gaps = 0/137 (0%) Query 17 AAVGYLLVAVLYRWFPPITVWTGLSLLAVAVAEALWARYVRVKISDGEIGDGPGWLHPLV 76 AAV +L Y I++ ++ +AV V+ ++ +G IG ++P+ Sbjct 17 AAVSAILTWRFYGSMTSISITVSITFWLLAVVCGFAGVKVQGRLDEGLIGQDKSQMNPVT 76 Query 77 VARSLMVAKASAWVGALVTGWWIGVLAYFLPRRSWLRAAAEDTTGTVVAAGSALALVVAA 136 +A M+ +A AW GA+ G ++G+ +Y +PR L AA+ D G + A +AL A Sbjct 77 IAYLAMLGRACAWGGAIFGGVYVGIGSYVIPRAGELSAASNDLPGVIACALGGIALSAAG 136 Query 137 LWLQHCCKSPQDPTEHA 153 L+L+ C++P + A Sbjct 137 LYLERSCEAPPPQSGEA 153 >gi|227502062|ref|ZP_03932111.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49725] gi|227077217|gb|EEI15180.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49725] Length=157 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/117 (35%), Positives = 62/117 (53%), Gaps = 1/117 (0%) Query 33 PITVWTGLSLLAVAVAEALWARYVRVKISDGEIGDGPGWLHPLVVARSLMVAKASAWVGA 92 P+TV L L+ V W + + D IG L+P+ +A+ ++V KASAW GA Sbjct 35 PVTVSATLWLMVVVCLGLTW-KVDKATDEDHGIGLDNSQLNPMTIAQFMLVGKASAWTGA 93 Query 93 LVTGWWIGVLAYFLPRRSWLRAAAEDTTGTVVAAGSALALVVAALWLQHCCKSPQDP 149 +V G + GV Y +P L AA++D G + +A +A+ A L L+ C++P P Sbjct 94 IVGGLYAGVAVYVIPNAGTLVAASDDLAGVLASAIGGVAMSAAGLRLERHCETPPPP 150 Lambda K H 0.322 0.134 0.443 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 128907826664 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40