BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3616c
Length=392
Score E
Sequences producing significant alignments: (Bits) Value
gi|67975065|gb|AAY84560.1| Rv3616c [Integrating expression vecto... 776 0.0
gi|15610752|ref|NP_218133.1| hypothetical protein Rv3616c [Mycob... 776 0.0
gi|15843226|ref|NP_338263.1| hypothetical protein MT3718 [Mycoba... 773 0.0
gi|306778499|ref|ZP_07416836.1| conserved alanine and glycine ri... 773 0.0
gi|121639535|ref|YP_979759.1| hypothetical protein BCG_3680c [My... 773 0.0
gi|31794792|ref|NP_857285.1| hypothetical protein Mb3646c [Mycob... 771 0.0
gi|289571853|ref|ZP_06452080.1| conserved alanine and glycine ri... 768 0.0
gi|341603556|emb|CCC66237.1| conserved hypothetical alanine and ... 692 0.0
gi|15827124|ref|NP_301387.1| hypothetical protein ML0405 [Mycoba... 389 4e-106
gi|289441046|ref|ZP_06430790.1| conserved hypothetical protein [... 384 2e-104
gi|240173316|ref|ZP_04751974.1| ESX-1 secretion-associated prote... 378 1e-102
gi|294995473|ref|ZP_06801164.1| hypothetical protein Mtub2_13415... 365 7e-99
gi|183984137|ref|YP_001852428.1| ESX-1 secretion-associated prot... 355 5e-96
gi|183985410|ref|YP_001853701.1| hypothetical protein MMAR_5439 ... 123 4e-26
gi|2222689|emb|CAB09940.1| hypothetical protein MLCL383.01 [Myco... 121 2e-25
gi|289445466|ref|ZP_06435210.1| conserved hypothetical protein [... 117 3e-24
gi|15611000|ref|NP_218381.1| hypothetical protein Rv3864 [Mycoba... 117 4e-24
gi|167967462|ref|ZP_02549739.1| hypothetical protein MtubH3_0526... 117 5e-24
gi|240171816|ref|ZP_04750475.1| hypothetical protein MkanA1_2105... 116 6e-24
gi|148825072|ref|YP_001289826.1| hypothetical protein TBFG_13899... 116 8e-24
gi|308406274|ref|ZP_07669561.1| hypothetical protein TMLG_00359 ... 115 2e-23
gi|31795038|ref|NP_857531.1| hypothetical protein Mb3894 [Mycoba... 114 3e-23
gi|240169790|ref|ZP_04748449.1| hypothetical alanine and glycine... 109 1e-21
gi|289748397|ref|ZP_06507775.1| conserved hypothetical protein [... 108 1e-21
gi|339296669|gb|AEJ48780.1| hypothetical protein CCDC5079_3591 [... 107 3e-21
gi|240168343|ref|ZP_04747002.1| hypothetical protein MkanA1_0346... 105 9e-21
gi|240172060|ref|ZP_04750719.1| hypothetical protein MkanA1_2228... 101 3e-19
gi|240170262|ref|ZP_04748921.1| hypothetical protein MkanA1_1319... 80.1 6e-13
gi|183985393|ref|YP_001853684.1| hypothetical protein MMAR_5422 ... 73.2 7e-11
gi|240170266|ref|ZP_04748925.1| hypothetical protein MkanA1_1321... 69.3 1e-09
gi|240170271|ref|ZP_04748930.1| hypothetical protein MkanA1_1324... 66.6 7e-09
gi|240169622|ref|ZP_04748281.1| hypothetical protein MkanA1_0993... 66.6 7e-09
gi|183985400|ref|YP_001853691.1| hypothetical protein MMAR_5429 ... 65.1 2e-08
gi|183985395|ref|YP_001853686.1| hypothetical protein MMAR_5424 ... 65.1 2e-08
gi|183985387|ref|YP_001853678.1| hypothetical protein MMAR_5416 ... 61.6 2e-07
gi|183984585|ref|YP_001852876.1| hypothetical protein MMAR_4618 ... 61.6 2e-07
gi|183981348|ref|YP_001849639.1| hypothetical protein MMAR_1325 ... 58.5 2e-06
gi|118470001|ref|YP_889339.1| hypothetical protein MSMEG_5089 [M... 57.4 4e-06
gi|118618035|ref|YP_906367.1| hypothetical protein MUL_2554 [Myc... 57.4 4e-06
gi|183985402|ref|YP_001853693.1| hypothetical protein MMAR_5431 ... 56.6 7e-06
gi|183985394|ref|YP_001853685.1| hypothetical protein MMAR_5423 ... 56.2 9e-06
gi|183985401|ref|YP_001853692.1| hypothetical protein MMAR_5430 ... 55.5 2e-05
gi|183985392|ref|YP_001853683.1| hypothetical protein MMAR_5421 ... 53.5 6e-05
gi|183985386|ref|YP_001853677.1| hypothetical protein MMAR_5415 ... 53.5 6e-05
gi|183985399|ref|YP_001853690.1| hypothetical protein MMAR_5428 ... 53.1 8e-05
gi|240170265|ref|ZP_04748924.1| hypothetical protein MkanA1_1321... 51.2 3e-04
gi|183985398|ref|YP_001853689.1| hypothetical protein MMAR_5427 ... 51.2 3e-04
gi|118469229|ref|YP_884473.1| hypothetical protein MSMEG_0055 [M... 49.7 0.001
gi|145220762|ref|YP_001131440.1| hypothetical protein Mflv_0157 ... 49.7 0.001
gi|118620053|ref|YP_908385.1| hypothetical protein MUL_5045 [Myc... 49.3 0.001
>gi|67975065|gb|AAY84560.1| Rv3616c [Integrating expression vector pALE4]
gi|68160255|gb|AAY86710.1| Rv3616c-hismyc [Integrating expression vector pALE2]
Length=412
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/392 (100%), Positives = 392/392 (100%), Gaps = 0/392 (0%)
Query 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA
Sbjct 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
Query 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT
Sbjct 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
Query 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD
Sbjct 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
Query 181 IISDVADIIKGTLGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT 240
IISDVADIIKGTLGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT
Sbjct 181 IISDVADIIKGTLGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT 240
Query 241 GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA 300
GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA
Sbjct 241 GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA 300
Query 301 STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY 360
STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY
Sbjct 301 STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY 360
Query 361 SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV 392
SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV
Sbjct 361 SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV 392
>gi|15610752|ref|NP_218133.1| hypothetical protein Rv3616c [Mycobacterium tuberculosis H37Rv]
gi|148663479|ref|YP_001285002.1| hypothetical protein MRA_3652 [Mycobacterium tuberculosis H37Ra]
gi|167968215|ref|ZP_02550492.1| conserved hypothetical alanine and glycine rich protein [Mycobacterium
tuberculosis H37Ra]
12 more sequence titles
Length=392
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/392 (100%), Positives = 392/392 (100%), Gaps = 0/392 (0%)
Query 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA
Sbjct 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
Query 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT
Sbjct 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
Query 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD
Sbjct 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
Query 181 IISDVADIIKGTLGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT 240
IISDVADIIKGTLGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT
Sbjct 181 IISDVADIIKGTLGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT 240
Query 241 GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA 300
GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA
Sbjct 241 GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA 300
Query 301 STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY 360
STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY
Sbjct 301 STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY 360
Query 361 SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV 392
SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV
Sbjct 361 SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV 392
>gi|15843226|ref|NP_338263.1| hypothetical protein MT3718 [Mycobacterium tuberculosis CDC1551]
gi|148824820|ref|YP_001289574.1| hypothetical protein TBFG_13647 [Mycobacterium tuberculosis F11]
gi|253800654|ref|YP_003033655.1| hypothetical protein TBMG_03653 [Mycobacterium tuberculosis KZN
1435]
39 more sequence titles
Length=392
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/392 (99%), Positives = 391/392 (99%), Gaps = 0/392 (0%)
Query 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA
Sbjct 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
Query 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT
Sbjct 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
Query 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD
Sbjct 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
Query 181 IISDVADIIKGTLGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT 240
IISDVADIIKG LGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT
Sbjct 181 IISDVADIIKGILGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT 240
Query 241 GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA 300
GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA
Sbjct 241 GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA 300
Query 301 STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY 360
STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY
Sbjct 301 STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY 360
Query 361 SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV 392
SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV
Sbjct 361 SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV 392
>gi|306778499|ref|ZP_07416836.1| conserved alanine and glycine rich protein [Mycobacterium tuberculosis
SUMu002]
gi|306786520|ref|ZP_07424842.1| conserved alanine and glycine rich protein [Mycobacterium tuberculosis
SUMu003]
gi|306790887|ref|ZP_07429209.1| conserved alanine and glycine rich protein [Mycobacterium tuberculosis
SUMu004]
13 more sequence titles
Length=392
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/392 (99%), Positives = 390/392 (99%), Gaps = 0/392 (0%)
Query 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA
Sbjct 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
Query 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT
Sbjct 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
Query 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
YIPVVGH LSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD
Sbjct 121 YIPVVGHVLSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
Query 181 IISDVADIIKGTLGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT 240
IISDVADIIKG LGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT
Sbjct 181 IISDVADIIKGILGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT 240
Query 241 GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA 300
GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA
Sbjct 241 GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA 300
Query 301 STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY 360
STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY
Sbjct 301 STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY 360
Query 361 SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV 392
SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV
Sbjct 361 SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV 392
>gi|121639535|ref|YP_979759.1| hypothetical protein BCG_3680c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224992032|ref|YP_002646721.1| hypothetical alanine and glycine rich protein [Mycobacterium
bovis BCG str. Tokyo 172]
gi|121495183|emb|CAL73669.1| Conserved hypothetical alanine and glycine rich protein [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|224775147|dbj|BAH27953.1| hypothetical alanine and glycine rich protein [Mycobacterium
bovis BCG str. Tokyo 172]
Length=392
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/392 (99%), Positives = 390/392 (99%), Gaps = 0/392 (0%)
Query 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
MSR FIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA
Sbjct 1 MSRVFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
Query 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT
Sbjct 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
Query 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD
Sbjct 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
Query 181 IISDVADIIKGTLGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT 240
IISDVADIIKG LGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT
Sbjct 181 IISDVADIIKGILGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT 240
Query 241 GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA 300
GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA
Sbjct 241 GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA 300
Query 301 STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY 360
STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY
Sbjct 301 STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY 360
Query 361 SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV 392
SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV
Sbjct 361 SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV 392
>gi|31794792|ref|NP_857285.1| hypothetical protein Mb3646c [Mycobacterium bovis AF2122/97]
gi|31620389|emb|CAD95832.1| CONSERVED HYPOTHETICAL ALANINE AND GLYCINE RICH PROTEIN [Mycobacterium
bovis AF2122/97]
Length=392
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/392 (99%), Positives = 390/392 (99%), Gaps = 0/392 (0%)
Query 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA
Sbjct 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
Query 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT
Sbjct 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
Query 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
YIPVVGHALSAAFQAPFCAGAMAVVGGALAYL VKTLINATQLLKLLAKLAELVAAAIAD
Sbjct 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLAVKTLINATQLLKLLAKLAELVAAAIAD 180
Query 181 IISDVADIIKGTLGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT 240
IISDVADIIKG LGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT
Sbjct 181 IISDVADIIKGILGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT 240
Query 241 GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA 300
GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA
Sbjct 241 GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA 300
Query 301 STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY 360
STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY
Sbjct 301 STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY 360
Query 361 SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV 392
SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV
Sbjct 361 SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV 392
>gi|289571853|ref|ZP_06452080.1| conserved alanine and glycine rich protein [Mycobacterium tuberculosis
T17]
gi|289545607|gb|EFD49255.1| conserved alanine and glycine rich protein [Mycobacterium tuberculosis
T17]
Length=392
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/392 (99%), Positives = 390/392 (99%), Gaps = 0/392 (0%)
Query 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA
Sbjct 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
Query 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT
Sbjct 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
Query 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
YIPVVGHALSAAFQAPF AGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD
Sbjct 121 YIPVVGHALSAAFQAPFGAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
Query 181 IISDVADIIKGTLGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT 240
IISDVADIIKG LGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT
Sbjct 181 IISDVADIIKGILGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT 240
Query 241 GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA 300
GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA
Sbjct 241 GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA 300
Query 301 STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY 360
STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY
Sbjct 301 STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKY 360
Query 361 SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV 392
SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV
Sbjct 361 SEGAAAGTEDAERAPVEADAGGGQKVLVRNVV 392
>gi|341603556|emb|CCC66237.1| conserved hypothetical alanine and glycine rich protein [Mycobacterium
bovis BCG str. Moreau RDJ]
Length=401
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/358 (98%), Positives = 349/358 (98%), Gaps = 0/358 (0%)
Query 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
MSR FIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA
Sbjct 1 MSRVFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
Query 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT
Sbjct 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
Query 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD
Sbjct 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
Query 181 IISDVADIIKGTLGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT 240
IISDVADIIKG LGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT
Sbjct 181 IISDVADIIKGILGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT 240
Query 241 GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA 300
GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA
Sbjct 241 GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA 300
Query 301 STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTK 358
STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHP G KG +
Sbjct 301 STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPLRGRRKGRRRR 358
>gi|15827124|ref|NP_301387.1| hypothetical protein ML0405 [Mycobacterium leprae TN]
gi|221229602|ref|YP_002503018.1| hypothetical protein MLBr_00405 [Mycobacterium leprae Br4923]
gi|466935|gb|AAC43223.1| B1620_C2_213 [Mycobacterium leprae]
gi|13092672|emb|CAC29913.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219932709|emb|CAR70498.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=394
Score = 389 bits (999), Expect = 4e-106, Method: Compositional matrix adjust.
Identities = 245/394 (63%), Positives = 300/394 (77%), Gaps = 2/394 (0%)
Query 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
MS AFIIDPT+ AI+ + LLGIG+PN GG+LYSSL +FEKALE LAAAFPGDGWLGSAA
Sbjct 1 MSGAFIIDPTLKAIEAWHALLGIGVPNDGGVLYSSLSFFEKALEHLAAAFPGDGWLGSAA 60
Query 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
DKYAG+NR V+ FQELA+LD++LI LIH+QAN+VQTTR IL+GAKK L FVRPVA+DL
Sbjct 61 DKYAGQNRKRVDIFQELAELDKELIELIHNQANSVQTTRGILDGAKKALLFVRPVAIDLN 120
Query 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
YIP+VG +SA+ QA CA AMA V G LAYL+V+T I+ + + LLA+LA L+A+A+AD
Sbjct 121 YIPLVGSVMSASIQAQACAAAMAAVSGGLAYLLVQTAIHTAKFVALLARLAHLLASAVAD 180
Query 181 IISDVADIIKGTLGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT 240
++SD IIKG + +W FI AL GLK++ +K+ W GLFS WS L SFF G+PGL+
Sbjct 181 VVSDGVAIIKGIVDHLWHFIAGALTGLKDIVEKIIHWFFGLFSHWWSRLHSFFGGIPGLS 240
Query 241 GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA 300
GATSGLSQVTGLFG GL+ SSGL +SL S+ +LP+LAG+G G G G LP LAQ+HAA
Sbjct 241 GATSGLSQVTGLFGVPGLAGSSGLLSGESLLSTENLPSLAGVGAGLGLGSLPQLAQLHAA 300
Query 301 STRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSS--GASKGTTTK 358
STRQ R +A + EQ GGQ + VSAQGSQGMGG GMGGM P+S K
Sbjct 301 STRQGTRSQAGVSAELSTEQFGGQQEPVSAQGSQGMGGSQGMGGMTPASTKSKKDERKKK 360
Query 359 KYSEGAAAGTEDAERAPVEADAGGGQKVLVRNVV 392
KYSEGAAAGT+DAERAP+E +GGG++ L ++VV
Sbjct 361 KYSEGAAAGTDDAERAPIEVQSGGGKRALAQHVV 394
>gi|289441046|ref|ZP_06430790.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289413965|gb|EFD11205.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length=218
Score = 384 bits (985), Expect = 2e-104, Method: Compositional matrix adjust.
Identities = 193/195 (99%), Positives = 193/195 (99%), Gaps = 0/195 (0%)
Query 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA
Sbjct 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
Query 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT
Sbjct 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
Query 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
YIPVVGHALSAAFQAPF AGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD
Sbjct 121 YIPVVGHALSAAFQAPFGAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
Query 181 IISDVADIIKGTLGE 195
IISDVADIIKG LGE
Sbjct 181 IISDVADIIKGILGE 195
>gi|240173316|ref|ZP_04751974.1| ESX-1 secretion-associated protein A, EspA [Mycobacterium kansasii
ATCC 12478]
Length=390
Score = 378 bits (970), Expect = 1e-102, Method: Compositional matrix adjust.
Identities = 233/397 (59%), Positives = 288/397 (73%), Gaps = 12/397 (3%)
Query 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
MSRAFIIDPTI IDG+Y LLGIG+P+ GGI+ S+L +F KAL++L +AFPGD W GSAA
Sbjct 1 MSRAFIIDPTIGFIDGMYVLLGIGVPDDGGIINSALSFFAKALDDLGSAFPGDSWQGSAA 60
Query 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
+ YAGKN++ +NFFQ+LA+LDR+L LI DQANAV+ TRD+L G +KGLEFVRPVAVDLT
Sbjct 61 ENYAGKNKDQLNFFQQLAELDRELQQLIADQANAVEKTRDVLAGVRKGLEFVRPVAVDLT 120
Query 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
YIP+VG A+SA+FQAP CA MAVVGGALAYL V+TLI+ QLL LLAKLA L+A+ + D
Sbjct 121 YIPLVGWAMSASFQAPICAAGMAVVGGALAYLTVETLIHTAQLLGLLAKLASLLASVVVD 180
Query 181 IISDVADIIKGTLGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT 240
I+SDV DII L +VW+FITN + L+ L L W L S+ S LESFF GVPGL
Sbjct 181 IVSDVVDIIDDILVDVWDFITNPIGFLENLLGDLAQWAYALLSKWGSTLESFFMGVPGLA 240
Query 241 GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGI-----GGGSGFGGLPSLA 295
G + GLSQ+TG F + S S+GLA DSLA A LP L G+ G +G GGL ++A
Sbjct 241 GMSGGLSQLTGFFSSPTASGSAGLASLDSLA-GAGLPGLPGVGAGLGGLPNGLGGLTNVA 299
Query 296 QVHAASTRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGT 355
Q+ +A+ RQ +RP D +EQ+G Q Q +AQ GP G+GGMHP++G++KG
Sbjct 300 QLRSAADRQDVRPHDDASAKPLSEQLGAQQQSPAAQ------GPQGLGGMHPAAGSAKGA 353
Query 356 TTKKYSEGAAAGTEDAERAPVEADAGGGQKVLVRNVV 392
KKY+EGAAAGT+ ERAPVEA GGGQ V R VV
Sbjct 354 PGKKYAEGAAAGTDGEERAPVEAGVGGGQLVSARRVV 390
>gi|294995473|ref|ZP_06801164.1| hypothetical protein Mtub2_13415 [Mycobacterium tuberculosis
210]
Length=181
Score = 365 bits (937), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 181/181 (100%), Positives = 181/181 (100%), Gaps = 0/181 (0%)
Query 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA
Sbjct 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
Query 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT
Sbjct 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
Query 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD
Sbjct 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
Query 181 I 181
I
Sbjct 181 I 181
>gi|183984137|ref|YP_001852428.1| ESX-1 secretion-associated protein A, EspA [Mycobacterium marinum
M]
gi|183177463|gb|ACC42573.1| ESX-1 secretion-associated protein A, EspA [Mycobacterium marinum
M]
Length=389
Score = 355 bits (912), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 249/384 (65%), Positives = 302/384 (79%), Gaps = 9/384 (2%)
Query 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
MSRAFIIDPTISAI+GL+ LLGIG+P GGI+ S+L +F KAL++L +AFPGDGWLGSAA
Sbjct 1 MSRAFIIDPTISAINGLHALLGIGLPEDGGIIDSALSFFGKALDDLGSAFPGDGWLGSAA 60
Query 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
D Y+GKNR HVNFF+ELA+LDR+L LI DQA+AV+TTR+ILE AKKGLEFVRPVAVDLT
Sbjct 61 DHYSGKNRKHVNFFKELAELDRELQKLIADQASAVKTTREILEDAKKGLEFVRPVAVDLT 120
Query 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
YIP+VG A+SAAFQAP CA AMAVVGGALAYLVVKTLIN+ +L+ LLA+LA+L+A A+AD
Sbjct 121 YIPIVGWAMSAAFQAPVCAAAMAVVGGALAYLVVKTLINSMKLVSLLAQLAKLLAEAVAD 180
Query 181 IISDVADIIKGTLGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLT 240
++SDV DIIKG L EVWEF+T+ LK+L +KL W + L S+ S L+SFF G+PGL+
Sbjct 181 VVSDVVDIIKGILEEVWEFLTHPFEFLKDLLNKLVSWASSLLSQWGSKLQSFFGGIPGLS 240
Query 241 GATSGLSQVTGLF---GAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQV 297
G GLSQ+T F GAAG + S G A + SL SSA LP G+GGGSGFG +P++AQ+
Sbjct 241 GMGGGLSQLTSFFSSAGAAGSAGSVGAADSASLVSSAGLPGGLGLGGGSGFGSMPNVAQL 300
Query 298 HAASTRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTT 357
+A+TRQ R ++GP ++E VG +Q SAQG Q GMGGMHP+S SKG T+
Sbjct 301 RSAATRQDPRLTSEGPTRVSSEPVGEHAQAASAQGGQ------GMGGMHPASAGSKGATS 354
Query 358 KKYSEGAAAGTEDAERAPVEADAG 381
KKYSEGAAAGTEDAERAPVE G
Sbjct 355 KKYSEGAAAGTEDAERAPVEVGVG 378
>gi|183985410|ref|YP_001853701.1| hypothetical protein MMAR_5439 [Mycobacterium marinum M]
gi|183178736|gb|ACC43846.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=418
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 124/399 (32%), Positives = 176/399 (45%), Gaps = 43/399 (10%)
Query 20 LLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELAD 79
LLG GIP+ G I + F+ +++ A PG WLG AAD Y +N + + D
Sbjct 22 LLGEGIPDPGDIFNTGSTLFKGIADKMGLAIPGTNWLGQAADAYLNQNIAQELRAKVMGD 81
Query 80 LDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCA 139
+D +LI +QA V TRD+L KK ++ V V L +P++G S P
Sbjct 82 VDYLTGNLISNQAEYVSNTRDVLRAMKKMIDGVYKVCKGLEKVPILGWLWSWELALPMSG 141
Query 140 GAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIADIISDVADIIKGTLGEVW-- 197
AMA VGGAL YL + TL+N T L LL +L E++ A++ +I + I G + ++W
Sbjct 142 IAMATVGGALLYLTIMTLMNLTNLKGLLGRLVEML-ASLPSLIGGLLPNIPGIIDDLWPP 200
Query 198 EFITNALNGLKEL-------WDK---LTGW---VTGL------FSRGWSNLESFFAGVPG 238
+ + GL + W + W + GL + G ++ F +PG
Sbjct 201 KLPDLPIPGLPNIPGLPDFTWPPKIDIPDWNLPIPGLPGFEFPPTSGIPGIDFPFPNIPG 260
Query 239 LTGATS--GLSQVTGLF-GAAGL-SASSGLAHADSLASSASLPALAGIGGGSGFGGLPSL 294
L S GL + LF G GL SG+ +L + L AL G GF GLPSL
Sbjct 261 LPSFPSLPGLPSIPDLFPGLPGLGDLFSGIGKWGTLPTWTDLAALPDFLG--GFAGLPSL 318
Query 295 AQVHAASTRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQG-MGGPVGMGGMHPSSGASK 353
+ + Q VG+ +G LVSA G G +G G SS AS+
Sbjct 319 SFSNLLGFAQLPN------VGSLTATMGQLQHLVSAAGGPGQLGSMAGQQASMISSQASQ 372
Query 354 GTTTKKYSEGAAAGTED--------AERAPVEADAGGGQ 384
G ED AERAP++A + GQ
Sbjct 373 GGQQATLVSDKKEDDEDGAAAGSAGAERAPIDAGSNTGQ 411
>gi|2222689|emb|CAB09940.1| hypothetical protein MLCL383.01 [Mycobacterium leprae]
Length=164
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/164 (61%), Positives = 120/164 (74%), Gaps = 2/164 (1%)
Query 231 SFFAGVPGLTGATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGG 290
SFF G+PGL+GATSGLSQVTGLFG GL+ SSGL +SL S+ +LP+LAG+G G G G
Sbjct 1 SFFGGIPGLSGATSGLSQVTGLFGVPGLAGSSGLLSGESLLSTENLPSLAGVGAGLGLGS 60
Query 291 LPSLAQVHAASTRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSS- 349
LP LAQ+HAASTRQ R +A + EQ GGQ + VSAQGSQGMGG GMGGM P+S
Sbjct 61 LPQLAQLHAASTRQGTRSQAGVSAELSTEQFGGQQEPVSAQGSQGMGGSQGMGGMTPAST 120
Query 350 -GASKGTTTKKYSEGAAAGTEDAERAPVEADAGGGQKVLVRNVV 392
KKYSEGAAAGT+DAERAP+E +GGG++ L ++VV
Sbjct 121 KSKKDERKKKKYSEGAAAGTDDAERAPIEVQSGGGKRALAQHVV 164
>gi|289445466|ref|ZP_06435210.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289418424|gb|EFD15625.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=391
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/285 (34%), Positives = 132/285 (47%), Gaps = 25/285 (8%)
Query 20 LLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELAD 79
LLG GIP+ G I + F++ +++ A PG W+G AA+ Y +N Q + D
Sbjct 21 LLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD 80
Query 80 LDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCA 139
LD+ ++I +QA V TRD+L KK ++ V V L IP++GH S P
Sbjct 81 LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSG 140
Query 140 GAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIADI----ISDVADIIKGTLGE 195
AMAVVGGAL YL + TL+NAT L +L +L E++ + + DII G
Sbjct 141 IAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFPGLPGLPSLPDIIDG---- 196
Query 196 VW--EFITNALNGLKELWDKLTGWVTGLFSRGWSNLE--SFFAGVPGLTGATSGLSQVTG 251
+W + + GL + + GL W F +PG A GL +
Sbjct 197 LWPPKLPDIPIPGLPD--------IPGLPDFKWPPTPGSPLFPAIPGFP-ALPGLPSIPN 247
Query 252 LF-GAAGL-SASSGLAHADSLASSASLPALAGIGGGSGFGGLPSL 294
LF G GL G+ L + L AL G GF GLPSL
Sbjct 248 LFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLG--GFAGLPSL 290
>gi|15611000|ref|NP_218381.1| hypothetical protein Rv3864 [Mycobacterium tuberculosis H37Rv]
gi|15843496|ref|NP_338533.1| hypothetical protein MT3978 [Mycobacterium tuberculosis CDC1551]
gi|148663731|ref|YP_001285254.1| hypothetical protein MRA_3903 [Mycobacterium tuberculosis H37Ra]
37 more sequence titles
Length=402
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 125/410 (31%), Positives = 173/410 (43%), Gaps = 79/410 (19%)
Query 20 LLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELAD 79
LLG GIP+ G I + F++ +++ A PG W+G AA+ Y +N Q + D
Sbjct 21 LLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD 80
Query 80 LDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCA 139
LD+ ++I +QA V TRD+L KK ++ V V L IP++GH S P
Sbjct 81 LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSG 140
Query 140 GAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIADI----ISDVADIIKGTLGE 195
AMAVVGGAL YL + TL+NAT L +L +L E++ + + DII G
Sbjct 141 IAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFPGLPGLPSLPDIIDG---- 196
Query 196 VW--EFITNALNGLKEL-------WDKLTGWVTGLFSRGWSNLESF--------FAGVPG 238
+W + + GL ++ W G S + +L SF F +PG
Sbjct 197 LWPPKLPDIPIPGLPDIPGLPDFKWPPTPG------SPLFPDLPSFPGFPGFPEFPAIPG 250
Query 239 LTGATSGLSQVTGLF-GAAGL-SASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQ 296
A GL + LF G GL G+ L + L AL G GF GLPSL
Sbjct 251 FP-ALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLG--GFAGLPSLGF 307
Query 297 VHAASTRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGT- 355
+ S A P VG +G QLV+A G PS AS G+
Sbjct 308 GNLLSF--ASLPT----VGQVTATMGQLQQLVAAGGG-------------PSQLASMGSQ 348
Query 356 --------------------TTKKYSEGAAAGTEDAERAPVEADAGGGQK 385
+ KK E G +AERAP++A Q+
Sbjct 349 QAQLISSQAQQGGQQHATLVSDKKEDE---EGVAEAERAPIDAGTAASQR 395
>gi|167967462|ref|ZP_02549739.1| hypothetical protein MtubH3_05262 [Mycobacterium tuberculosis
H37Ra]
gi|254548868|ref|ZP_05139315.1| hypothetical protein Mtube_00115 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|297733544|ref|ZP_06962662.1| hypothetical protein MtubKR_20735 [Mycobacterium tuberculosis
KZN R506]
gi|313660875|ref|ZP_07817755.1| hypothetical protein MtubKV_20730 [Mycobacterium tuberculosis
KZN V2475]
Length=382
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 122/410 (30%), Positives = 171/410 (42%), Gaps = 79/410 (19%)
Query 20 LLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELAD 79
+LG GIP+ G I + F++ +++ A PG W+G AA+ Y +N Q + D
Sbjct 1 MLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD 60
Query 80 LDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCA 139
LD+ ++I +QA V TRD+L KK ++ V V L IP++GH S P
Sbjct 61 LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSG 120
Query 140 GAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIADI----ISDVADIIKGTLGE 195
AMAVVGGAL YL + TL+NAT L +L +L E++ + + DII G
Sbjct 121 IAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFPGLPGLPSLPDIIDG---- 176
Query 196 VW--EFITNALNGLKEL-------WDKLTGWVTGLFSRGWSNLESF--------FAGVPG 238
+W + + GL ++ W G S + +L SF F +PG
Sbjct 177 LWPPKLPDIPIPGLPDIPGLPDFKWPPTPG------SPLFPDLPSFPGFPGFPEFPAIPG 230
Query 239 LTGATSGLSQVTGLF-GAAGL-SASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQ 296
A GL + LF G GL G+ L + L AL G GF GLPSL
Sbjct 231 FP-ALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLG--GFAGLPSLGF 287
Query 297 VHAASTRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGT- 355
+ S VG +G QLV+A G PS AS G+
Sbjct 288 GNLLSFASLPT------VGQVTATMGQLQQLVAAGGG-------------PSQLASMGSQ 328
Query 356 --------------------TTKKYSEGAAAGTEDAERAPVEADAGGGQK 385
+ KK E G +AERAP++A Q+
Sbjct 329 QAQLISSQAQQGGQQHATLVSDKKEDE---EGVAEAERAPIDAGTAASQR 375
>gi|240171816|ref|ZP_04750475.1| hypothetical protein MkanA1_21050 [Mycobacterium kansasii ATCC
12478]
Length=426
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 107/314 (35%), Positives = 148/314 (48%), Gaps = 33/314 (10%)
Query 1 MSRAFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAA 60
MS+ IID TI I+ + LLG GIP G I SS F + + + PGD W G+AA
Sbjct 1 MSKTAIIDNTIDVIEAMDLLLGEGIPISGAIFDSSSSRFRSIAHQQSNSEPGDNWTGTAA 60
Query 61 DKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLT 120
DKY KN Q +AD+D +LI D+A AV RD LE L+ +P A DL
Sbjct 61 DKYIQKNLFLQACEQIMADVDYITGTLITDEAQAVIKARDSLEHQIHHLDKQKPTARDLW 120
Query 121 YIPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIAD 180
IP++G +S FQ C AM V ALA L + T+ N L+ LAK+A L++ D
Sbjct 121 DIPLIGPIISRTFQISVCDSAMTSVETALAQLTLTTMENTIALVDELAKIAVLLSELPID 180
Query 181 IISD-VADIIKGTLGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGL 239
I+ D +AD+ E++ A+ L EL +++ V + R L +
Sbjct 181 IVKDWLADL---------EYLVAAI--LSEL-NRIIFAVEQVLQR--VTLAVVDELKHAI 226
Query 240 TGATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQV-H 298
A GL V + AD L+ LP+L + +G GL SLA++ H
Sbjct 227 ADAIHGLKCVVDVL-------------ADELSRIPVLPSLTEMATMTGISGLGSLARIAH 273
Query 299 AASTRQALRPRADG 312
A T P +DG
Sbjct 274 IAGT----APISDG 283
>gi|148825072|ref|YP_001289826.1| hypothetical protein TBFG_13899 [Mycobacterium tuberculosis F11]
gi|253800914|ref|YP_003033916.1| hypothetical protein TBMG_03912 [Mycobacterium tuberculosis KZN
1435]
gi|289556133|ref|ZP_06445343.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
8 more sequence titles
Length=402
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 124/410 (31%), Positives = 173/410 (43%), Gaps = 79/410 (19%)
Query 20 LLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELAD 79
+LG GIP+ G I + F++ +++ A PG W+G AA+ Y +N Q + D
Sbjct 21 VLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD 80
Query 80 LDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCA 139
LD+ ++I +QA V TRD+L KK ++ V V L IP++GH S P
Sbjct 81 LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSG 140
Query 140 GAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIADI----ISDVADIIKGTLGE 195
AMAVVGGAL YL + TL+NAT L +L +L E++ + + DII G
Sbjct 141 IAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFPGLPGLPSLPDIIDG---- 196
Query 196 VW--EFITNALNGLKEL-------WDKLTGWVTGLFSRGWSNLESF--------FAGVPG 238
+W + + GL ++ W G S + +L SF F +PG
Sbjct 197 LWPPKLPDIPIPGLPDIPGLPDFKWPPTPG------SPLFPDLPSFPGFPGFPEFPAIPG 250
Query 239 LTGATSGLSQVTGLF-GAAGL-SASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQ 296
A GL + LF G GL G+ L + L AL G GF GLPSL
Sbjct 251 FP-ALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLG--GFAGLPSLGF 307
Query 297 VHAASTRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGT- 355
+ S A P VG +G QLV+A G PS AS G+
Sbjct 308 GNLLSF--ASLPT----VGQVTATMGQLQQLVAAGGG-------------PSQLASMGSQ 348
Query 356 --------------------TTKKYSEGAAAGTEDAERAPVEADAGGGQK 385
+ KK E G +AERAP++A Q+
Sbjct 349 QAQLISSQAQQGGQQHATLVSDKKEDE---EGVAEAERAPIDAGTAASQR 395
>gi|308406274|ref|ZP_07669561.1| hypothetical protein TMLG_00359 [Mycobacterium tuberculosis SUMu012]
gi|308363927|gb|EFP52778.1| hypothetical protein TMLG_00359 [Mycobacterium tuberculosis SUMu012]
Length=351
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/346 (33%), Positives = 154/346 (45%), Gaps = 42/346 (12%)
Query 10 TISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRN 69
T + I G LLG GIP+ G I + F++ +++ A PG W+G AA+ Y +N
Sbjct 11 TSNFIWGQLLLLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIA 70
Query 70 HVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHAL 129
Q + DLD+ ++I +QA V TRD+L KK ++ V V L IP++GH
Sbjct 71 QQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLW 130
Query 130 SAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIADI----ISDV 185
S P AMAVVGGAL YL + TL+NAT L +L +L E++ + +
Sbjct 131 SWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFPGLPGLPSL 190
Query 186 ADIIKGTLGEVW--EFITNALNGLKEL-------WDKLTGWVTGLFSRGWSNLESF---- 232
DII G +W + + GL ++ W G + LF +L SF
Sbjct 191 PDIIDG----LWPPKLPDIPIPGLPDIPGLPDFKWPPTPG--SPLF----PDLPSFPGFP 240
Query 233 ----FAGVPGLTGATSGLSQVTGLF-GAAGL-SASSGLAHADSLASSASLPALAGIGGGS 286
F +PG A GL + LF G GL G+ L + L AL G
Sbjct 241 GFPEFPAIPGFP-ALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLG-- 297
Query 287 GFGGLPSLAQVHAASTRQALRPRADGPVGAAAEQVGGQSQLVSAQG 332
GF GLPSL + S VG +G QLV+A G
Sbjct 298 GFAGLPSLGFGNLLSFASLPT------VGQVTATMGQLQQLVAAGG 337
>gi|31795038|ref|NP_857531.1| hypothetical protein Mb3894 [Mycobacterium bovis AF2122/97]
gi|121639782|ref|YP_980006.1| hypothetical protein BCG_3927 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224992277|ref|YP_002646967.1| hypothetical protein JTY_3929 [Mycobacterium bovis BCG str. Tokyo
172]
16 more sequence titles
Length=418
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 136/300 (46%), Gaps = 37/300 (12%)
Query 20 LLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELAD 79
LLG GIP+ G I + F++ +++ A PG W+G AA+ Y +N Q + D
Sbjct 21 LLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD 80
Query 80 LDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCA 139
LD+ ++I +QA V TRD+L KK ++ V V L IP++GH S P
Sbjct 81 LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSG 140
Query 140 GAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIADI----ISDVADIIKGTLGE 195
AMAVVGGAL YL + TL+NAT L +L +L E++ + + DII G
Sbjct 141 IAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTTLPKFPGLPGLPSLPDIIDG---- 196
Query 196 VW--EFITNALNGLKEL-------WDKLTGWVTGLFSRGWSNLESF--FAGVPGLTGATS 244
+W + + GL ++ W G S + +L SF F G P L G
Sbjct 197 LWPPKLPDIPIPGLPDIPGLPDFKWPPTPG------SPLFPDLPSFPGFPGFPSLPG--- 247
Query 245 GLSQVTGLFGAAGLSASSGLAHADSLASSASL-PALAGIG----GGSGFGGLPSLAQVHA 299
GL G A G L S +L P L G+G G G LP+ ++ A
Sbjct 248 ----FPGLPGFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELAA 303
>gi|240169790|ref|ZP_04748449.1| hypothetical alanine and glycine rich protein [Mycobacterium
kansasii ATCC 12478]
Length=393
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/326 (30%), Positives = 161/326 (50%), Gaps = 39/326 (11%)
Query 6 IIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAG 65
I++ TIS I+ LY LG+G P G + +S F +A+E A+A D W+G+AA+KY+
Sbjct 6 ILNSTISFIESLYMTLGVGTPVTGEVFDTSSSTFREAIETQASAVLSDNWVGTAAEKYSE 65
Query 66 KNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVV 125
K++ + Q +AD+D +L+ DQA AV+ R L+ LE +P A L Y +V
Sbjct 66 KSKTLQDAEQIMADVDYITGTLVSDQAEAVEKARKTLKKWINFLEDCKPYAKAL-YNAIV 124
Query 126 GHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIADIISDV 185
S FQA A AM VG AL L++ T NA +L++ + ++ EL+ +D D+
Sbjct 125 TIPDSYVFQAAVSAVAMTAVGIALLELLLTTFENAEKLVERIEEIVELLVQLPSDFTEDL 184
Query 186 ADIIKGTL----GEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFF-------- 233
A +++G L E+ + +++ ++ ++ ++ V S S L+S
Sbjct 185 AALLEGLLSGMESEISDLVSDVVSDVESEVSQIVSEVKSEVSEVVSALKSEISDLSLSDL 244
Query 234 -----------------------AGVPGLTGATSGLSQVTGLFGAAGLSASSGLAHADSL 270
+G+ L+G+T LS +T L G++ LS S+ L+ +
Sbjct 245 SLSDLSSLSDLSAFSSLSSLMSVSGLTSLSGST-ALSDLTSLPGSSALSGSTALSDVAAS 303
Query 271 ASSASLPALAGIGGGSGFGGLPSLAQ 296
+ SA P L + +G+ GLP+ Q
Sbjct 304 SGSAISPGL--LTRFAGYTGLPASGQ 327
>gi|289748397|ref|ZP_06507775.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289688984|gb|EFD56413.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=174
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/154 (40%), Positives = 86/154 (56%), Gaps = 0/154 (0%)
Query 20 LLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELAD 79
LLG GIP+ G I + F++ +++ A PG W+G AA+ Y +N Q + D
Sbjct 21 LLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD 80
Query 80 LDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCA 139
LD+ ++I +QA V TRD+L KK ++ V V L IP++GH S P
Sbjct 81 LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSG 140
Query 140 GAMAVVGGALAYLVVKTLINATQLLKLLAKLAEL 173
AMAVVGGAL YL + TL+NAT L +L +L E+
Sbjct 141 IAMAVVGGALLYLTIMTLMNATNLRGILGRLIEM 174
>gi|339296669|gb|AEJ48780.1| hypothetical protein CCDC5079_3591 [Mycobacterium tuberculosis
CCDC5079]
Length=287
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/157 (39%), Positives = 87/157 (56%), Gaps = 0/157 (0%)
Query 20 LLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELAD 79
LLG GIP+ G I + F++ +++ A PG W+G AA+ Y +N Q + D
Sbjct 21 LLGEGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVMGD 80
Query 80 LDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCA 139
LD+ ++I +QA V TRD+L KK ++ V V L IP++GH S P
Sbjct 81 LDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSG 140
Query 140 GAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAA 176
AMAVVGGAL YL + TL+NAT L +L +L E++
Sbjct 141 IAMAVVGGALLYLTIMTLMNATNLRGILGRLIEMLTT 177
>gi|240168343|ref|ZP_04747002.1| hypothetical protein MkanA1_03462 [Mycobacterium kansasii ATCC
12478]
Length=434
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 123/418 (30%), Positives = 172/418 (42%), Gaps = 69/418 (16%)
Query 20 LLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELAD 79
LLG GIP+ G + S F++ +++ A PG W+G AAD Y +N + + D
Sbjct 20 LLGEGIPDPGDVFNSGATLFKQISDKIGLAIPGTNWIGQAADAYLNQNIAQQLRAKVMGD 79
Query 80 LDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCA 139
+D ++I +QA V TRD+L KK ++ V V L +P++G S P
Sbjct 80 IDSLTGNMISNQAKYVSNTRDVLRAMKKMIDGVYKVCKGLEKVPLLGWLWSWELALPMSG 139
Query 140 GAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVA----------AAIADII-----SD 184
AMA VGGAL YL + TL+N T L LL +L E++ +I DII
Sbjct 140 IAMATVGGALLYLTIMTLMNVTNLKGLLGRLIEMLTTLPKFPGLPLPSIPDIIDGLWPPK 199
Query 185 VADI-------IKGTLGEVWEFITN------ALNGLKEL-WDKLTGWVTGLFSRGWSNLE 230
+ DI I G W + + GL E W + GL G NL
Sbjct 200 LPDIPIPGLPNIPGLPDFKWPPVPGIPDFNLPIPGLPEFEWPS----IPGLPDFGLPNLP 255
Query 231 SFFAGVPGLTGAT-------SGLSQVTGLFGAAGLSA----SSGLAHADSLASSASLPAL 279
G+P G GL + LF GL + G+ + L + L AL
Sbjct 256 G-LPGLPSFPGLPIPGFPNLPGLPSIPNLF--PGLPSLGDLIPGIGNLGKLPTWTELAAL 312
Query 280 AGIGGGSGFGGLPSLAQVHAASTRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGP 339
G GF GLPSL+ S Q V + +G LV+A G G G
Sbjct 313 PDFLG--GFAGLPSLSFSDLMSFAQLPN------VSSLTATMGQLQHLVAAGGGPGQLG- 363
Query 340 VGMGGMHPSSGASKG------------TTTKKYSEGAAAGTEDAERAPVEADAGGGQK 385
M G +S+ + ++ E AA AERAP++A A GGQ+
Sbjct 364 -SMAGQQAQMISSQAQQGGQQQQATLVSDKREEDEEGAAAGAGAERAPIDAGAAGGQQ 420
>gi|240172060|ref|ZP_04750719.1| hypothetical protein MkanA1_22280 [Mycobacterium kansasii ATCC
12478]
Length=394
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/399 (28%), Positives = 167/399 (42%), Gaps = 46/399 (11%)
Query 21 LGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELADL 80
+G G+P+ G I + + +++ A PG W+G++A Y+ +N + ++D+
Sbjct 1 MGSGVPDPGDIFTTGSSLLRQVSDKMELAIPGANWIGASAAAYSSQNLAQQLRTKAMSDI 60
Query 81 DRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCAG 140
D+ +L+ +QA ++ R +L + VR L +P+VG LS A P C
Sbjct 61 DKLAGNLVSNQARHIRDARKVLSAMITMVNGVRKACKKLEKVPLVGKGLSLALAVPPCGT 120
Query 141 AMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAA--AIADI----ISDVADII-KGTL 193
AM+VVGGAL YL + T+ N L LL +L E++ A A + I + +I L
Sbjct 121 AMSVVGGALLYLTLTTMNNVMNLKGLLGRLIEMLTALPKFAGLPKLPIPGLPEIAWPPKL 180
Query 194 GEVWEFITNALNGLKEL-WDKLTG------WVTGLFSRGWSNLESF-----------FAG 235
E+ ++ GL E W G + GL W ++ F G
Sbjct 181 PEIPIPGLPSIPGLPEFNWPPTPGAPDFTLPIPGLPEFQWPSMPGFPQFNWPRPGFPIPG 240
Query 236 VPGLTGATSGLSQVTGLFGAAGLSASSG-LAHADSLASSASLPA-LAGIGGGS------- 286
PGL G + GL G L + G L + ASLP LAG G
Sbjct 241 FPGLPGLPTIPDVFPGLPGLDDLLSGVGILGRLPTWVEVASLPEFLAGFAGLPSLDFGEL 300
Query 287 -GFGGLPSLAQVHAASTRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGM 345
F LP++ Q+ + A A G G Q+ ++S+ Q G P G+ G+
Sbjct 301 LSFAQLPAVGQLTETMNQLAQLASAGGHSSNIVNMAGQQTPMISSLARQS-GPPQGILGV 359
Query 346 HPSSGASKGTTTKKYSEGAAAGTEDAERAPVEADAGGGQ 384
T + AAAG ERAP++ + G Q
Sbjct 360 D---------TDNEVRTDAAAGAT-VERAPIDTASDGTQ 388
>gi|240170262|ref|ZP_04748921.1| hypothetical protein MkanA1_13198 [Mycobacterium kansasii ATCC
12478]
Length=434
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 104/388 (27%), Positives = 163/388 (43%), Gaps = 33/388 (8%)
Query 16 GLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQ 75
G+ LG G P+ G S F++ ++AA P GW GSAA Y+ +N +
Sbjct 56 GVLPWLGDGSPDGGDRFAGSRAMFDRVSGQIAALVPDGGWQGSAAQAYSTRNLAQSQHTK 115
Query 76 ELADLDRQLISLIHDQANAVQTTRDIL--EGAKKGLEFVRPVAVDLTYIPVVGHALSAAF 133
+ DLD Q+ L+ +QA AV+ R ++ E G F + + T P G LS
Sbjct 116 MMRDLDYQIGQLVSNQAEAVERVRSVVITEMVAIGCTFAFCIYCEATMGP-AGKILSRRT 174
Query 134 QAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVA--AAIADIISDVADI--I 189
CA A+AVV G L L ++T NA++ + KL E++ A++ +S D+ +
Sbjct 175 ATVICAFALAVVVGFLIDLAIRTSRNASKARAMTQKLTEMLTRLPALSRPMSGSPDMAFL 234
Query 190 KGTLGEVWEFITNALNGLKELWDKL--TGWVTGLFSR-------GWSNLESFFAGVPGLT 240
+ + + GL ++ L T V+ +F+ G NL + G P
Sbjct 235 PSYSPSEYHTLPPTIAGLLDVNAPLPQTTDVSLVFADLPGAPEFGVPNLPA--PGFPDFG 292
Query 241 GATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALA---GIGGGSGFGGLPSLAQV 297
+ +TG+ +S GL + +LP A G LP++AQ
Sbjct 293 APHMPIPHLTGMPTLPDVS-PDGLPMVPTNNDLVALPGFADALATPPSRGLAKLPAMAQA 351
Query 298 HAASTR-QALRPRADGPVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTT 356
A ++ L A G +G A G Q+Q++S+ QG H + + T
Sbjct 352 TAPPSQLTGLSGAASG-LGQLANTAGQQAQMISSLAQQG-------AQQH--ATRTGHAT 401
Query 357 TKKYSEGAAAGTEDAERAPVEADAGGGQ 384
+ GAAA T A R PV+ G Q
Sbjct 402 QDDDTVGAAADTTTAGRVPVDTATGSSQ 429
>gi|183985393|ref|YP_001853684.1| hypothetical protein MMAR_5422 [Mycobacterium marinum M]
gi|183178719|gb|ACC43829.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=414
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 106/382 (28%), Positives = 156/382 (41%), Gaps = 51/382 (13%)
Query 10 TISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRN 69
T+ A+ G LG G+P+ G L S F++A +++A P GW G+AA Y +N+
Sbjct 60 TLGALGGALAWLGNGLPDVGDALARSGAMFDRAGAQISALGPDAGWQGTAAAAYVAQNQA 119
Query 70 HVNFFQELADLDRQLISLIHDQANAVQTTRD--ILEGAKKGLEFVRPVAVDLTYIPVVGH 127
+ADLDR L+ QA+ V+T RD ILE + F V +L G
Sbjct 120 QSQHAGLMADLDRLAAELVSSQAHGVETARDVVILEILVVMILFGACVVFELEG--PAGQ 177
Query 128 ALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIADIISDVAD 187
LS P C A+AV G L L V+T A+ L + +L +VAA + D
Sbjct 178 LLSFKIAIPICGAALAVAAGFLIDLAVRTSGKASSLQAVTQRLTAMVAA-----LPRWCD 232
Query 188 IIKGTLGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLTGATSGLS 247
II G EV + G + G T + + A +PG +
Sbjct 233 IIPGA-PEVALPQPHCPAGFDVADETARGPHT-------PDPRAALADLPGSPEFNAPSV 284
Query 248 QVTGL--FGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAASTRQA 305
G FGA L LA +LP L+G+ LP+L Q+ + +
Sbjct 285 AAPGFPDFGAPHLPIP-------QLAGMPALPDLSGV-----LANLPTLRQLSSLT---- 328
Query 306 LRPRADGPVGAA---AEQVGGQSQLVSAQGSQGMGGPVGMG-----GMHPSSGASKGTTT 357
GP A A +Q++S+ QG + G + ++G T
Sbjct 329 ------GPTSAISQLANTATQHAQMISSLAQQGAQQHATLADRLTTGHDDDTPDTEGATA 382
Query 358 KKYSEGAAAGTEDAERAPVEAD 379
+EGA A T ERAP++A+
Sbjct 383 D--TEGATADTTVGERAPIDAE 402
>gi|240170266|ref|ZP_04748925.1| hypothetical protein MkanA1_13218 [Mycobacterium kansasii ATCC
12478]
Length=427
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/344 (26%), Positives = 136/344 (40%), Gaps = 33/344 (9%)
Query 10 TISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRN 69
TI + GL LLG G P+ G L +S F +AA P DGW G AA Y+ +N
Sbjct 52 TIRGLSGLQPLLGDGSPDPGDRLAASGPMFADVSARIAALIPDDGWQGLAAQSYSAQNLA 111
Query 70 HVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGL--EFVRPVAVDLTYIPVVGH 127
+ + DLDR+ L+ QA A+Q ++ + + F + ++T P G
Sbjct 112 QSQRAKMMGDLDRRTGELVSAQAEAIQRVYYVVVAERLAVAGTFAFCIYYEVTGGP-AGQ 170
Query 128 ALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVA--AAIADIISDV 185
LS C A+ V+ G L L + T NA L KL +++ ++D I +
Sbjct 171 ILSFQVAVAVCTVAIIVLSGFLIDLWITTSQNAIDLQAATQKLTDMLTMLPTLSDTIPGL 230
Query 186 ADIIKGTLGEVWEF----ITNALNGLKELWD----------KLTGWVTGLFSRGWSNLES 231
D EF + + L E D L + L S G+ + +
Sbjct 231 PDGALPPSHTRPEFDAARLLDFTGPLPETPDISLAFADLPGSLEFNLPTLPSPGFPDFGA 290
Query 232 FFAGVPGLTGATSGLSQVTGLFGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGL 291
+P LTG + G + GL + A+ P +G GL
Sbjct 291 PHLPIPQLTGMPTLPDPFCG---------ADGLPRVPTANELAASPDFSG-----ALAGL 336
Query 292 PSLAQVHAASTRQALRPRADGPVGAAAEQVGGQSQLVSAQGSQG 335
P +AQ+ A +R P A G + G Q+Q++S+ QG
Sbjct 337 PIMAQLTAPFSRLTGLPGAAGGLSQLTNTAGQQAQMISSLTQQG 380
>gi|240170271|ref|ZP_04748930.1| hypothetical protein MkanA1_13243 [Mycobacterium kansasii ATCC
12478]
Length=360
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 105/364 (29%), Positives = 155/364 (43%), Gaps = 54/364 (14%)
Query 45 ELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEG 104
++AA P GW GSAA Y N + +A LDR LI QA V T R I+
Sbjct 8 QIAALVPDSGWQGSAAQAYVAHNHAQSQHAKTMAALDRLTGDLIAAQARTVLTARRIVIV 67
Query 105 AKKGLEFVRPVAVDLTYI--PVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQ 162
A + + L + P G S C A+AV+ GA+ L+V T NA +
Sbjct 68 AAGVVAATGLCCLALETLGGP-AGQGQSLILAKVVCGIALAVLAGAVVNLIVTTFQNAGK 126
Query 163 LLKLLAKLAELVAAAIADIISDVADIIKGTLGEVWEFITNA-----------LNGLKELW 211
+ L ++LA++V + +++D I G+ G +A L + L
Sbjct 127 VQALTSELADIVTR-----LPELSDPIPGSPGAFSPRSGSASGFNATDHSGSLTLARVLD 181
Query 212 DKLTGWVTGLFSRGWSNL--ESFFA------------GVPGLTGAT-SGLSQVTGLFGAA 256
D +T T ++L F+ G P LT T +G+ V +F
Sbjct 182 DTVTLPETPDVCLALADLPGSPEFSVPDLAGPGFPDFGAPDLTTPTLTGMPSVPDVF--- 238
Query 257 GLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAASTRQALRPRADGPVGA 316
GL + SA+LP ++G G G LP++AQ+ A+ AL G GA
Sbjct 239 ----PGGLPAIPTADESAALPDVSGARAGLGPANLPTIAQL--AAPLSALS----GLSGA 288
Query 317 AAEQVGGQSQL--VSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKYSEGAAAGTEDAERA 374
GG SQL ++AQ +Q + P++ A + T + GAAAGT A+RA
Sbjct 289 ----TGGLSQLSNLAAQQAQMISSLAQQSAQQPATLADQ-VTQNDDTVGAAAGTPTAQRA 343
Query 375 PVEA 378
PV+A
Sbjct 344 PVDA 347
>gi|240169622|ref|ZP_04748281.1| hypothetical protein MkanA1_09932 [Mycobacterium kansasii ATCC
12478]
Length=379
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 110/391 (29%), Positives = 162/391 (42%), Gaps = 40/391 (10%)
Query 21 LGIGIPNQGGILYSSLEYFEKALEELAAAF-PGDGWLGSAADKYAGKNRNHVNFFQELAD 79
LG G P++G L S F + + +AA P GW GSAA Y+ +N Q +A+
Sbjct 5 LGAGFPDRGDGLASGASMFSEVGDRIAALHAPDGGWQGSAARAYSVQNLAQSRRVQVMAE 64
Query 80 LDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHA----------- 128
LDR ++ QA V R ++ G +G V A+ ++ +
Sbjct 65 LDRLAADMVSAQAQVVGNNR-LVTGVAQGA--VGATALYCLHLEQAAYVGLAAGNIAAAL 121
Query 129 ----LSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAA--AIADII 182
LS C A+A VGG L L V+T NAT+LL + + +++AA +++D +
Sbjct 122 AGLRLSRTVALGVCGLALATVGGFLIDLAVRTSRNATELLVVTRRATDVLAALPSLSDPV 181
Query 183 SDVADIIKGTLGEVWEFITNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGLTGA 242
VAD+ F AL + VT G + FA +PG
Sbjct 182 PGVADVDIPRSDSPAGFDVPALTLPPSVASSPD--VTAPLP-GTPDAVGVFADLPGSPEF 238
Query 243 TSGLSQVTGL--FGAAGLSASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAA 300
+ S + G FGA + LA L+ + A G+ P++ Q+ AA
Sbjct 239 SGPTSPIPGFPDFGAPDMPIPV-LAGLPDLSGGVAGLAGLGLANPPAVTKPPAMDQLRAA 297
Query 301 STRQALRPRADGPVGAAAEQVGGQSQL--VSAQGSQGMGGPVGMGGMHPSSGASKGTTTK 358
+R G GAA GG SQL V Q +Q M + G+ P + + T
Sbjct 298 LSRLT------GLSGAA----GGPSQLAGVDDQRAQ-MISLLAQQGVQPGASPADHVTND 346
Query 359 KYSEGAAAGTEDAERAPVEADAGGGQKVLVR 389
S GAA+G A RAPV+A G Q+ R
Sbjct 347 DASAGAASGPTGAWRAPVDAATGPPQQPQQR 377
>gi|183985400|ref|YP_001853691.1| hypothetical protein MMAR_5429 [Mycobacterium marinum M]
gi|183178726|gb|ACC43836.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=385
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/161 (33%), Positives = 71/161 (45%), Gaps = 0/161 (0%)
Query 16 GLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQ 75
GL LG P+QG L SS F+ + ++AA P GW GSAA Y +N
Sbjct 49 GLLAWLGHEFPDQGDRLDSSGSMFDGVIAQIAALGPDGGWQGSAARAYGARNLAQSQHTG 108
Query 76 ELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQA 135
+ADLDR L+ QA+ V R L + + V + L G +S
Sbjct 109 LMADLDRLAAELVSAQADDVHKVRSTLWALVAIVSVLLVVCIGLELQGPEGQLVSFYSAL 168
Query 136 PFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAA 176
P C A+ V AL +L V T NA+ + +L +VAA
Sbjct 169 PICGTALFVAAVALTFLAVTTSRNASAVQAATQRLTAMVAA 209
>gi|183985395|ref|YP_001853686.1| hypothetical protein MMAR_5424 [Mycobacterium marinum M]
gi|183178721|gb|ACC43831.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=346
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/201 (31%), Positives = 90/201 (45%), Gaps = 25/201 (12%)
Query 13 AIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVN 72
++ G++ LG+G P++G L S F++ +AA P D W G AA Y +NR
Sbjct 35 SLTGIWLALGLGSPDRGAALVHSGSIFDEVSGRIAALVPEDRWQGLAAQAYTSQNRAQSQ 94
Query 73 FFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAA 132
Q +ADLDR L+ QA+A+ R+IL L+ +R +A TY+ + L
Sbjct 95 RTQLVADLDRLAADLVAAQADAIAAIREIL------LDEIRIIAC--TYVICLNCEL--- 143
Query 133 FQAP------------FCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAA--AI 178
F P C AM VV + YLVV + NA L L ++AA +
Sbjct 144 FMGPQGQLWSFRIATIVCDLAMIVVACCITYLVVTSYQNARSLQAATQSLTGMLAALPML 203
Query 179 ADIISDVADIIKGTLGEVWEF 199
+D + D+ L EF
Sbjct 204 SDPPAGRPDVAFPPLSSPLEF 224
>gi|183985387|ref|YP_001853678.1| hypothetical protein MMAR_5416 [Mycobacterium marinum M]
gi|183178713|gb|ACC43823.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=361
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/182 (30%), Positives = 81/182 (45%), Gaps = 6/182 (3%)
Query 4 AFIIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKY 63
+ I D T G+ LLG G+P+ G S F++ ++AA PG GW G AA Y
Sbjct 42 SVICDATEYVCVGVRFLLGDGLPDPGDRYAGSGSMFDEVSAQVAALVPGGGWRGCAAQAY 101
Query 64 AGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIP 123
A ++ + + DLDR L+ Q++AV R ++ A+ + + + L
Sbjct 102 AAQSLAQSARAKMMGDLDRHTRDLVAAQSDAVTRVRSVVITAEVFVACLGVCCLALETQG 161
Query 124 VVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINA------TQLLKLLAKLAELVAAA 177
G A+S C+ A+A + G L L V T NA TQ L + +A A
Sbjct 162 PTGQAVSFFLALDLCSVALAALIGGLISLAVTTSRNASGMQDTTQCLTTMMTSLPTLAPA 221
Query 178 IA 179
+A
Sbjct 222 VA 223
>gi|183984585|ref|YP_001852876.1| hypothetical protein MMAR_4618 [Mycobacterium marinum M]
gi|183177911|gb|ACC43021.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=417
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/168 (31%), Positives = 78/168 (47%), Gaps = 3/168 (1%)
Query 10 TISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRN 69
T+ + L LG G P+ G L +S F++ ++AA P DGW G AA Y +N
Sbjct 82 TMRLMTALELSLGDGTPDNGDRLAASGAKFDELSAQIAALGPDDGWQGLAAQAYLAQNLA 141
Query 70 HVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGL--EFVRPVAVDLTYIPVVGH 127
+ + DLD + L+ QA A++ RD+L + L F + +L P G
Sbjct 142 QSQRVKLMGDLDHETSQLVSAQAKAIERVRDVLIVERIALIGTFALCLWYELMDGP-EGQ 200
Query 128 ALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELVA 175
ALS CA A+ V+ G L L T + ++L KL +++A
Sbjct 201 ALSMEVAIAACAVALIVLSGFLVDLCNTTSQDHSELHSATQKLTDMLA 248
>gi|183981348|ref|YP_001849639.1| hypothetical protein MMAR_1325 [Mycobacterium marinum M]
gi|183174674|gb|ACC39784.1| conserved hypothetical membrane protein [Mycobacterium marinum
M]
Length=432
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/165 (30%), Positives = 78/165 (48%), Gaps = 0/165 (0%)
Query 10 TISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRN 69
TI+ ++ L L+G G P +G L F KA +L +A P + W GSA+ YA +N
Sbjct 89 TINIVEVLETLMGFGPPAEGDELLVGSTQFAKAQAQLGSALPDNSWQGSASYAYASQNTA 148
Query 70 HVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHAL 129
N Q LA+LD + +L+ DQA V R + K L V + L + G A+
Sbjct 149 LQNRGQALAELDVKFAALVKDQAEWVTHGRLGIAILKNLLLAAFAVEMALMFAVPAGPAM 208
Query 130 SAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELV 174
+ +F +A+ G L+ ++ ++ N+ + L A +L
Sbjct 209 ARSFGFTVSGLGIAIAMGLLSTVLTYSVENSKKADVLTANYQDLT 253
>gi|118470001|ref|YP_889339.1| hypothetical protein MSMEG_5089 [Mycobacterium smegmatis str.
MC2 155]
gi|118171288|gb|ABK72184.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=752
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/109 (34%), Positives = 55/109 (51%), Gaps = 12/109 (11%)
Query 11 ISAIDGLY-------DLLGIGIPNQGGIL--YSSLEYFEKALEELAAAFPGDGWLGSAAD 61
+ A+DG Y + G G P G SL + ++E AA P D W GS A+
Sbjct 1 MGALDGFYSTWNKARETFGQGAPTDGSQFDQSRSLTQMKASVE---AAAPDDRWQGSGAN 57
Query 62 KYAGKNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLE 110
YA N+ H +Q+LADLD+++ + + + AN V R L+ AK +E
Sbjct 58 AYAAANKEHAQVYQKLADLDQKMAAEVKNAANVVSAGRTNLDNAKSWVE 106
>gi|118618035|ref|YP_906367.1| hypothetical protein MUL_2554 [Mycobacterium ulcerans Agy99]
gi|118570145|gb|ABL04896.1| conserved hypothetical membrane protein [Mycobacterium ulcerans
Agy99]
Length=432
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/84 (39%), Positives = 46/84 (55%), Gaps = 0/84 (0%)
Query 10 TISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRN 69
TI+ ++ L L+G G P +G L F KA +L +A P + W GSA+ YA +N
Sbjct 89 TINIVEVLETLMGFGPPAEGDELLVGSTQFAKAQAQLGSALPDNSWQGSASYAYASQNTA 148
Query 70 HVNFFQELADLDRQLISLIHDQAN 93
N Q LA+LD + +L+ DQA
Sbjct 149 LQNRGQALAELDVKFAALVKDQAE 172
>gi|183985402|ref|YP_001853693.1| hypothetical protein MMAR_5431 [Mycobacterium marinum M]
gi|183178728|gb|ACC43838.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=401
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/216 (27%), Positives = 85/216 (40%), Gaps = 16/216 (7%)
Query 25 IPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELADLDRQL 84
+P++G L S F+ ++A P GW G+AA Y KN +ADLDR
Sbjct 75 VPSRGESLDRSGSMFDGVSTQIATLDPDGGWRGNAARAYGAKNLAQSQHTTLIADLDRLT 134
Query 85 ISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCAGAMAV 144
L+ QA+AV+ RD+L + + V + L G LS P C A+
Sbjct 135 GELVSSQADAVKRARDLLSAEIWIVLVLLVVCIGLELHGPEGQILSFHIAIPICTMAVFT 194
Query 145 VGGALAYLVVKTLINATQLLKLLAKLAELVAAAI--ADIISDVADIIKGTLGEVWEFITN 202
AL L T NA+ + +L + AA AD + + + + EF
Sbjct 195 AATALGVLAATTSQNASAVQAATQRLTAMAAALTTGADTVPSSPKMTFPPIHSLSEF--- 251
Query 203 ALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPG 238
L E TG +L+S A +PG
Sbjct 252 ---DLTE--------ATGPTPPQLPDLQSTLAELPG 276
>gi|183985394|ref|YP_001853685.1| hypothetical protein MMAR_5423 [Mycobacterium marinum M]
gi|183178720|gb|ACC43830.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=401
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/156 (29%), Positives = 68/156 (44%), Gaps = 0/156 (0%)
Query 21 LGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELADL 80
LG G P + L + F ++A P GW GSAA Y +NR +++L
Sbjct 83 LGYGFPERAEGLAGTGSRFGAVSAQIAGLGPEAGWQGSAARAYGAQNRAQSERATLMSNL 142
Query 81 DRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCAG 140
DR + L+ QA VQ R ++ G + + + + + +GH +S A C
Sbjct 143 DRHIADLVTAQAEDVQAVRSVVTGEMVAVAGLCALCLYCESLGPLGHEVSLAIALTACGV 202
Query 141 AMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAA 176
+A+ G L L V T NA L KL ++AA
Sbjct 203 LLAITIGFLIDLAVTTSRNAGDLRAAEQKLTAMLAA 238
>gi|183985401|ref|YP_001853692.1| hypothetical protein MMAR_5430 [Mycobacterium marinum M]
gi|183178727|gb|ACC43837.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=397
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 94/375 (26%), Positives = 137/375 (37%), Gaps = 39/375 (10%)
Query 21 LGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELADL 80
LG P+QGG L F+ ++AA P GW GSAA Y +ADL
Sbjct 50 LGHASPDQGGCLVKGAAMFDDLGAQIAALVPDSGWQGSAARSYGAHTLAQSRHSTLMADL 109
Query 81 DRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCAG 140
DR L+ QA+ V+ R L A + + + + G LS F C
Sbjct 110 DRLAAELVSSQADDVKQARTALWAAIGFVSVYLLICLGIELQGPEGQLLSFNFAVVVCGA 169
Query 141 AMAVVGGALAYLVVKTLINATQLLKLLAKLAELVAAAIADIISDVADIIKGTLGEVWEFI 200
+ + L L KT A+ L +L+++VA ++ +D+I G+ E
Sbjct 170 VLGISALVLHDLAKKTSRRASSLQTTTQRLSDMVAG-----LATRSDMIPGSP----EMS 220
Query 201 TNALNGLKELWDKLTGWVTGLFSRGWSNLESFFAGVPGL------TGATSGLSQVTGLFG 254
+ L E LT + +L+S FA +PG T A +GL FG
Sbjct 221 LPPAHSLSEF--HLTD-SSAASPPHLPDLDSAFADLPGAPEFHLPTAAGAGLPD----FG 273
Query 255 AAGL--SASSGLAHADSLASSASLPALAGIGGGSGFGGLPSLAQVHAASTRQALRPRADG 312
A L A SGL L S GLP++ Q+ A ++
Sbjct 274 APQLPIPALSGLPTLPDPTDPTDL--------SSMLAGLPTITQLPAILSQLNNLAGPTS 325
Query 313 PVGAAAEQVGGQSQLVSAQGSQGMGGPVGMGGMHPSSGASKGTTTKKYSEGAAAGTEDAE 372
V A +Q++S QG H + T ++ A A T E
Sbjct 326 AVSQLANTATQHAQMISTLAQQG-------AHPHTTLTDHHTTDETPDTDAATAATSSGE 378
Query 373 RAPVEADAGGGQKVL 387
RAP++ Q L
Sbjct 379 RAPLDTTTHPTQHRL 393
>gi|183985392|ref|YP_001853683.1| hypothetical protein MMAR_5421 [Mycobacterium marinum M]
gi|183178718|gb|ACC43828.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=411
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/93 (37%), Positives = 46/93 (50%), Gaps = 0/93 (0%)
Query 10 TISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRN 69
T S + G LG G P++G L S F+ ++A PG W GSAA Y +N
Sbjct 63 TESLLGGALAWLGNGFPDRGDGLVCSASMFDGVGAQIATLIPGGSWRGSAAQAYLVQNLA 122
Query 70 HVNFFQELADLDRQLISLIHDQANAVQTTRDIL 102
+ADLDR L+ QA+AV+T R +L
Sbjct 123 QSRHATLMADLDRLAADLVSSQADAVKTARGVL 155
>gi|183985386|ref|YP_001853677.1| hypothetical protein MMAR_5415 [Mycobacterium marinum M]
gi|183178712|gb|ACC43822.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=417
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/157 (37%), Positives = 75/157 (48%), Gaps = 6/157 (3%)
Query 21 LGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELADL 80
LG+G P+ G L SS F+ A ++A PG GW G+AA YA N + + DL
Sbjct 93 LGLGFPDSGDDLLSSASMFDGARSQIADLVPGGGWRGAAAQAYAANNLAQSQRAKLIGDL 152
Query 81 DRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHA---LSAAFQAPF 137
DR L+ QA+AV+T R I+ GA+ + V Y +G A LS
Sbjct 153 DRLTAGLVSAQADAVKTARWIV-GAE--MAVVGGTGACCLYWETLGPAGQVLSLQVALTV 209
Query 138 CAGAMAVVGGALAYLVVKTLINATQLLKLLAKLAELV 174
CA A+A G L L+ T NA+ L L LAE V
Sbjct 210 CAIALATALGFLFALLSTTSRNASGLHLLTKALAETV 246
>gi|183985399|ref|YP_001853690.1| hypothetical protein MMAR_5428 [Mycobacterium marinum M]
gi|183178725|gb|ACC43835.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=329
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/151 (30%), Positives = 70/151 (47%), Gaps = 2/151 (1%)
Query 26 PNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELADLDRQLI 85
P +G +L SS F+ ++AA P GW GSAA Y +N +ADLDR
Sbjct 18 PFRGDVLDSSGSMFDGVSTQIAALGPDGGWQGSAARAYGARNLAQSQHTILMADLDRLAA 77
Query 86 SLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAFQAPFCAGAMAVV 145
L+ QA V+ RD + + V V + L G +S + A F A + ++
Sbjct 78 ELVSAQAEHVKFARDFMRIEIGIVSVVLVVCIGLESRGPDGQEVS-FYIASFVAAIVLLI 136
Query 146 GGALAY-LVVKTLINATQLLKLLAKLAELVA 175
G + Y L KT ++A+ + + +L +VA
Sbjct 137 AGVVMYDLAEKTWLSASDMQAVAQRLTAMVA 167
>gi|240170265|ref|ZP_04748924.1| hypothetical protein MkanA1_13213 [Mycobacterium kansasii ATCC
12478]
Length=460
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/90 (37%), Positives = 44/90 (49%), Gaps = 0/90 (0%)
Query 10 TISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRN 69
T A+ G+ LG G P+ G L +S F+ ++AA P GW G AA Y G+N
Sbjct 84 TWCALGGMLGWLGDGSPDAGDRLVASGSVFDDVSAQIAALIPDGGWQGLAAQAYVGQNLA 143
Query 70 HVNFFQELADLDRQLISLIHDQANAVQTTR 99
+ + DLDR L+ QA AV TR
Sbjct 144 QSQRAKMMGDLDRLAGGLVSAQAPAVSDTR 173
>gi|183985398|ref|YP_001853689.1| hypothetical protein MMAR_5427 [Mycobacterium marinum M]
gi|183178724|gb|ACC43834.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=330
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/76 (40%), Positives = 39/76 (52%), Gaps = 0/76 (0%)
Query 25 IPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNFFQELADLDRQL 84
P+QG L+SS F+ +LAA P GW G+AA Y +N +ADLDR
Sbjct 18 FPDQGDGLHSSGSVFDGVSAQLAALGPDGGWRGNAAQAYGARNLAQSQHTILMADLDRGA 77
Query 85 ISLIHDQANAVQTTRD 100
L+ QA AV+ RD
Sbjct 78 AELVLSQAEAVKKVRD 93
>gi|118469229|ref|YP_884473.1| hypothetical protein MSMEG_0055 [Mycobacterium smegmatis str.
MC2 155]
gi|118170516|gb|ABK71412.1| hypothetical protein MSMEG_0055 [Mycobacterium smegmatis str.
MC2 155]
Length=525
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/156 (24%), Positives = 64/156 (42%), Gaps = 0/156 (0%)
Query 14 IDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHVNF 73
I G+ G+G P G ++ A L +A+P W +A+D Y +N V
Sbjct 86 ITGMKLTTGVGDPENGRRFGEGADHMSAAGRTLDSAYPTSDWDSAASDAYLSQNNGQVTR 145
Query 74 FQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTYIPVVGHALSAAF 133
+ L D+ + +++ +A + TTR++L+ L + V + IP VG A A
Sbjct 146 AEALVHADQVVAAVLSREAEQIATTREVLDSEADWLGDMSLVTMATGLIPYVGRAAQTAA 205
Query 134 QAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAK 169
+ A+ + K NA ++ + K
Sbjct 206 EIAMVTKAVGASTDQFMMMRDKADENAAEVRDAIGK 241
>gi|145220762|ref|YP_001131440.1| hypothetical protein Mflv_0157 [Mycobacterium gilvum PYR-GCK]
gi|145213248|gb|ABP42652.1| hypothetical protein Mflv_0157 [Mycobacterium gilvum PYR-GCK]
Length=353
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/97 (29%), Positives = 43/97 (45%), Gaps = 0/97 (0%)
Query 6 IIDPTISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAG 65
II+ + + + LG G P G F +A +EL A P W G A+D Y
Sbjct 66 IINAGLMTLTAASNTLGFGRPEDGERFTDGARQFSEANDELQQAVPPPDWQGDASDAYGL 125
Query 66 KNRNHVNFFQELADLDRQLISLIHDQANAVQTTRDIL 102
+N +A D Q+ ++ ++A VQ TRD +
Sbjct 126 RNTEQQQRAGSMATFDGQIQEVLAEEAGQVQDTRDFV 162
>gi|118620053|ref|YP_908385.1| hypothetical protein MUL_5045 [Mycobacterium ulcerans Agy99]
gi|118572163|gb|ABL06914.1| conserved hypothetical transmembrane protein [Mycobacterium ulcerans
Agy99]
Length=298
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (35%), Positives = 47/93 (51%), Gaps = 0/93 (0%)
Query 10 TISAIDGLYDLLGIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRN 69
T++ + ++ LG P QG L SS F+ ++AA P GW G+AA Y +N
Sbjct 76 TLTILGVMWGWLGDESPEQGDRLASSGSLFDDVGAQVAALGPDGGWRGNAAQAYWVQNLA 135
Query 70 HVNFFQELADLDRQLISLIHDQANAVQTTRDIL 102
+ADLDR L+ QA+AV+ R+ L
Sbjct 136 QSRHATLMADLDRLTAGLVSSQADAVKQARERL 168
Lambda K H
0.316 0.134 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 771196383050
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40