BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3621c
Length=413
Score E
Sequences producing significant alignments: (Bits) Value
gi|15843233|ref|NP_338270.1| PPE family protein [Mycobacterium t... 791 0.0
gi|254233119|ref|ZP_04926445.1| PPE family protein [Mycobacteriu... 790 0.0
gi|289571857|ref|ZP_06452084.1| PPE family protein [Mycobacteriu... 790 0.0
gi|289555880|ref|ZP_06445090.1| PPE family protein [Mycobacteriu... 788 0.0
gi|307086416|ref|ZP_07495529.1| PPE family protein [Mycobacteriu... 781 0.0
gi|183985089|ref|YP_001853380.1| PPE family protein [Mycobacteri... 484 8e-135
gi|240172417|ref|ZP_04751076.1| PPE family protein [Mycobacteriu... 433 3e-119
gi|289748134|ref|ZP_06507512.1| PPE family protein [Mycobacteriu... 357 2e-96
gi|296166685|ref|ZP_06849110.1| PPE family protein [Mycobacteriu... 309 7e-82
gi|254773196|ref|ZP_05214712.1| PPE family protein [Mycobacteriu... 296 5e-78
gi|183985085|ref|YP_001853376.1| PPE family protein, PPE65 [Myco... 294 2e-77
gi|118466000|ref|YP_879815.1| PPE family protein [Mycobacterium ... 293 4e-77
gi|118619369|ref|YP_907701.1| PPE family protein [Mycobacterium ... 285 7e-75
gi|41406540|ref|NP_959376.1| hypothetical protein MAP0442 [Mycob... 281 2e-73
gi|183980225|ref|YP_001848516.1| PPE family protein, PPE51_2 [My... 251 1e-64
gi|183981862|ref|YP_001850153.1| PPE family protein [Mycobacteri... 235 1e-59
gi|240172861|ref|ZP_04751520.1| PPE family protein, PPE31 [Mycob... 216 7e-54
gi|296167733|ref|ZP_06849950.1| PPE family protein [Mycobacteriu... 214 2e-53
gi|342861307|ref|ZP_08717955.1| PPE family protein [Mycobacteriu... 209 5e-52
gi|240171463|ref|ZP_04750122.1| PPE family protein [Mycobacteriu... 209 6e-52
gi|118617919|ref|YP_906251.1| PPE family protein [Mycobacterium ... 206 4e-51
gi|183981528|ref|YP_001849819.1| PPE family protein, PPE51 [Myco... 206 4e-51
gi|296170357|ref|ZP_06851948.1| PPE family protein [Mycobacteriu... 206 5e-51
gi|167967397|ref|ZP_02549674.1| PPE family protein [Mycobacteriu... 206 7e-51
gi|294996719|ref|ZP_06802410.1| PPE family protein [Mycobacteriu... 206 8e-51
gi|308372058|ref|ZP_07427232.2| putative PPE family protein [Myc... 206 8e-51
gi|183982688|ref|YP_001850979.1| PPE family protein, PPE31_1 [My... 205 1e-50
gi|307084423|ref|ZP_07493536.1| putative PPE family protein [Myc... 204 2e-50
gi|31792997|ref|NP_855490.1| PPE family protein [Mycobacterium b... 202 6e-50
gi|57116921|ref|YP_177844.1| PPE family protein [Mycobacterium t... 202 7e-50
gi|183982690|ref|YP_001850981.1| PPE family protein, PPE31 [Myco... 202 1e-49
gi|306782177|ref|ZP_07420514.1| PPE family protein [Mycobacteriu... 201 1e-49
gi|15843090|ref|NP_338127.1| PPE family protein [Mycobacterium t... 197 2e-48
gi|240169314|ref|ZP_04747973.1| PPE family protein [Mycobacteriu... 196 6e-48
gi|212595976|gb|ACJ35541.1| PPE16 [Mycobacterium avium subsp. av... 194 2e-47
gi|118466099|ref|YP_881935.1| PPE family protein [Mycobacterium ... 194 3e-47
gi|57116920|ref|YP_177653.1| PPE family protein [Mycobacterium t... 194 3e-47
gi|148661613|ref|YP_001283136.1| PPE family protein [Mycobacteri... 193 4e-47
gi|336457435|gb|EGO36444.1| PPE-repeat containing protein [Mycob... 193 4e-47
gi|254821012|ref|ZP_05226013.1| PPE family protein, PPE31 [Mycob... 189 6e-46
gi|342861296|ref|ZP_08717944.1| PPE family protein [Mycobacteriu... 189 9e-46
gi|340627882|ref|YP_004746334.1| PPE family protein [Mycobacteri... 188 1e-45
gi|289447421|ref|ZP_06437165.1| PPE family protein [Mycobacteriu... 187 3e-45
gi|289761957|ref|ZP_06521335.1| predicted protein [Mycobacterium... 187 3e-45
gi|15841277|ref|NP_336314.1| PPE family protein [Mycobacterium t... 187 3e-45
gi|118618458|ref|YP_906790.1| PPE family protein [Mycobacterium ... 187 4e-45
gi|326903411|gb|EGE50344.1| LOW QUALITY PROTEIN: PPE family prot... 187 4e-45
gi|296164838|ref|ZP_06847396.1| PPE family protein [Mycobacteriu... 186 8e-45
gi|31792996|ref|NP_855489.1| PPE family protein [Mycobacterium b... 186 8e-45
gi|341601736|emb|CCC64409.1| PPE family protein [Mycobacterium b... 185 1e-44
>gi|15843233|ref|NP_338270.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|57117135|ref|YP_177998.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148663484|ref|YP_001285007.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
59 more sequence titles
Length=413
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/413 (100%), Positives = 413/413 (100%), Gaps = 0/413 (0%)
Query 1 MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG 60
MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG
Sbjct 1 MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG 60
Query 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA
Sbjct 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
Query 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGL 180
LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGL
Sbjct 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGL 180
Query 181 ASQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGS 240
ASQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGS
Sbjct 181 ASQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGS 240
Query 241 GLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWASE 300
GLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWASE
Sbjct 241 GLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWASE 300
Query 301 GAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPAASPAVLAA 360
GAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPAASPAVLAA
Sbjct 301 GAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPAASPAVLAA 360
Query 361 SNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPPAGG 413
SNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPPAGG
Sbjct 361 SNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPPAGG 413
>gi|254233119|ref|ZP_04926445.1| PPE family protein [Mycobacterium tuberculosis C]
gi|124602912|gb|EAY61187.1| PPE family protein [Mycobacterium tuberculosis C]
Length=413
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/413 (99%), Positives = 412/413 (99%), Gaps = 0/413 (0%)
Query 1 MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG 60
MLDFAQLPPEVNSALMYAGPGSGPMLA AAAWEALAAELQTTASTYDALITGLADGPWQG
Sbjct 1 MLDFAQLPPEVNSALMYAGPGSGPMLAGAAAWEALAAELQTTASTYDALITGLADGPWQG 60
Query 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA
Sbjct 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
Query 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGL 180
LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGL
Sbjct 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGL 180
Query 181 ASQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGS 240
ASQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGS
Sbjct 181 ASQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGS 240
Query 241 GLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWASE 300
GLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWASE
Sbjct 241 GLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWASE 300
Query 301 GAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPAASPAVLAA 360
GAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPAASPAVLAA
Sbjct 301 GAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPAASPAVLAA 360
Query 361 SNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPPAGG 413
SNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPPAGG
Sbjct 361 SNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPPAGG 413
>gi|289571857|ref|ZP_06452084.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289545611|gb|EFD49259.1| PPE family protein [Mycobacterium tuberculosis T17]
Length=413
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/413 (99%), Positives = 412/413 (99%), Gaps = 0/413 (0%)
Query 1 MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG 60
MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG
Sbjct 1 MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG 60
Query 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA
Sbjct 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
Query 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGL 180
LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGL
Sbjct 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGL 180
Query 181 ASQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGS 240
ASQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGS
Sbjct 181 ASQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGS 240
Query 241 GLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWASE 300
GLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWASE
Sbjct 241 GLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWASE 300
Query 301 GAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPAASPAVLAA 360
GAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPAASP VLAA
Sbjct 301 GAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPAASPTVLAA 360
Query 361 SNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPPAGG 413
SNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPPAGG
Sbjct 361 SNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPPAGG 413
>gi|289555880|ref|ZP_06445090.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|289440512|gb|EFD23005.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
Length=412
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/412 (99%), Positives = 412/412 (100%), Gaps = 0/412 (0%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+DFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS
Sbjct 1 MDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL
Sbjct 61 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA
Sbjct 121 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 180
Query 182 SQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGSG 241
SQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGSG
Sbjct 181 SQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGSG 240
Query 242 LIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWASEG 301
LIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWASEG
Sbjct 241 LIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWASEG 300
Query 302 AKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPAASPAVLAAS 361
AKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPAASPAVLAAS
Sbjct 301 AKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPAASPAVLAAS 360
Query 362 NGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPPAGG 413
NGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPPAGG
Sbjct 361 NGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPPAGG 412
>gi|307086416|ref|ZP_07495529.1| PPE family protein [Mycobacterium tuberculosis SUMu012]
gi|308364148|gb|EFP52999.1| PPE family protein [Mycobacterium tuberculosis SUMu012]
Length=413
Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/413 (99%), Positives = 410/413 (99%), Gaps = 0/413 (0%)
Query 1 MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG 60
MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG
Sbjct 1 MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG 60
Query 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA
Sbjct 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
Query 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGL 180
LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGL
Sbjct 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGL 180
Query 181 ASQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGS 240
ASQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGS
Sbjct 181 ASQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGS 240
Query 241 GLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWASE 300
GLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWASE
Sbjct 241 GLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWASE 300
Query 301 GAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPAASPAVLAA 360
GAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGL+ VWTATTPAASPAVLAA
Sbjct 301 GAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLEGSGVWTATTPAASPAVLAA 360
Query 361 SNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPPAGG 413
SNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPPAGG
Sbjct 361 SNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPPAGG 413
>gi|183985089|ref|YP_001853380.1| PPE family protein [Mycobacterium marinum M]
gi|183178415|gb|ACC43525.1| PPE family protein [Mycobacterium marinum M]
Length=413
Score = 484 bits (1247), Expect = 8e-135, Method: Compositional matrix adjust.
Identities = 305/415 (74%), Positives = 344/415 (83%), Gaps = 4/415 (0%)
Query 1 MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG 60
MLDFAQLPPEVNSALMY+GPGSGPML AAAAW+ LAAELQ TASTYDAL+T L DGPWQG
Sbjct 1 MLDFAQLPPEVNSALMYSGPGSGPMLTAAAAWDVLAAELQATASTYDALVTELTDGPWQG 60
Query 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
SAA+MVAAA PQV WLR+TA AEQAGSQAVAAA AYEAAF ATVPPP IAANRALLMA
Sbjct 61 PSAANMVAAAMPQVEWLRNTAALAEQAGSQAVAAAGAYEAAFVATVPPPVIAANRALLMA 120
Query 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGL 180
L+ATNFLGQNT AIAATEAQY EMWAQDAAAMYGYAG+SAAA QL+PF+PAAQT++ AGL
Sbjct 121 LMATNFLGQNTGAIAATEAQYGEMWAQDAAAMYGYAGSSAAAAQLAPFDPAAQTVSAAGL 180
Query 181 ASQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGS 240
A+QAA+VGQA++GA ++QAL +IPKAL L+GI +NEPPWLTDL A+GLTGH W+S+G
Sbjct 181 ANQAAAVGQALNGAVDSQALAEIPKALSQLAGI-SNEPPWLTDLTGAIGLTGHAWNSNGD 239
Query 241 GLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWASE 300
G+IVGG LGD VQGVTGSAE+DA V MDTF KWVSPARL VTQFKDY GLAHDLPK+A E
Sbjct 240 GIIVGGALGDIVQGVTGSAEVDAGVFMDTFSKWVSPARLAVTQFKDYVGLAHDLPKFAQE 299
Query 301 GAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPAASPAVLAA 360
GAKAA EAAK LPA +P++P GL G+ GAVG+AASV GL VP W + AA+ +
Sbjct 300 GAKAAAEAAKELPAVLPSLPGVGLGGITGAVGKAASVTGLSVPTSWMNSVGAAANPAIVT 359
Query 361 SNGLGAAAAAEGSTHAFGGMPLM-GSGAGRAF-NNFAAPRYGFKPTVIAQPPAGG 413
N LGAAAA + A GG+PLM SG GR +FAAPRYGFKPT++ PPAGG
Sbjct 360 VNSLGAAAAEP-AQAAVGGVPLMPASGVGRGMAAHFAAPRYGFKPTMVVHPPAGG 413
>gi|240172417|ref|ZP_04751076.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=412
Score = 433 bits (1113), Expect = 3e-119, Method: Compositional matrix adjust.
Identities = 298/415 (72%), Positives = 347/415 (84%), Gaps = 6/415 (1%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+DFAQLPPE+NSALMY+GPGSGPMLAAAAAW+ALAAELQ+TAS+YDAL+T L DGPWQG
Sbjct 1 MDFAQLPPEINSALMYSGPGSGPMLAAAAAWDALAAELQSTASSYDALVTALTDGPWQGP 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
SAASMVAAA PQVAWLRSTA QAEQAG QAVAAA+AYEAAF ATVPP E+AANRAL+MAL
Sbjct 61 SAASMVAAAMPQVAWLRSTAAQAEQAGGQAVAAATAYEAAFMATVPPAEVAANRALMMAL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASA AT L+PF+PA T+N AG+
Sbjct 121 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAQATTLTPFSPALPTVNLAGVV 180
Query 182 SQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGSG 241
+QA +V QAVS +A AQ +T I +L ++G+ TNE PWL++ ALGL GHTW+S+G G
Sbjct 181 AQANAVAQAVSTSAPAQGMTQITNSLLQMAGL-TNEAPWLSNPLAALGLVGHTWNSNGDG 239
Query 242 LIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWASEG 301
++V G+ GD V+G+TGSA +D S+ MD F +WVSPARL+VTQ KDYFGLAHDLPKWASEG
Sbjct 240 IVVAGLFGDVVEGLTGSATVDGSLPMDVFNRWVSPARLVVTQMKDYFGLAHDLPKWASEG 299
Query 302 AKAAGEAAKALPAAVP-AIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPAASPAVLAA 360
A++A +AAK A+P A+PSAGL G+AGAVG+AASVGGL VPA W T A+P ++
Sbjct 300 AESAAKAAKGAIEALPAALPSAGLGGIAGAVGKAASVGGLSVPASWANTVGPANP-IVTI 358
Query 361 SNGLGAAAAAEGSTHAFGGMPLM-GSGAGRAF-NNFAAPRYGFKPTVIAQPPAGG 413
SN LGAAAAAE + AFGGMP+M GSG GR +FAAPRYGFKPTV+ QPPAGG
Sbjct 359 SN-LGAAAAAEPAASAFGGMPVMPGSGVGRGMAAHFAAPRYGFKPTVVPQPPAGG 412
>gi|289748134|ref|ZP_06507512.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289688721|gb|EFD56150.1| PPE family protein [Mycobacterium tuberculosis T92]
Length=184
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 183/184 (99%), Positives = 184/184 (100%), Gaps = 0/184 (0%)
Query 230 LTGHTWSSDGSGLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFG 289
+TGHTWSSDGSGLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFG
Sbjct 1 MTGHTWSSDGSGLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFG 60
Query 290 LAHDLPKWASEGAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTAT 349
LAHDLPKWASEGAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTAT
Sbjct 61 LAHDLPKWASEGAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTAT 120
Query 350 TPAASPAVLAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQP 409
TPAASPAVLAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQP
Sbjct 121 TPAASPAVLAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQP 180
Query 410 PAGG 413
PAGG
Sbjct 181 PAGG 184
>gi|296166685|ref|ZP_06849110.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897950|gb|EFG77531.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=405
Score = 309 bits (791), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 244/422 (58%), Positives = 285/422 (68%), Gaps = 26/422 (6%)
Query 1 MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG 60
MLDF LPPE+NSALMY+GPGSGPMLAAAA+WEALAA+L TAS Y +++TGL DGPW G
Sbjct 1 MLDFGLLPPEINSALMYSGPGSGPMLAAAASWEALAADLANTASGYLSVVTGLTDGPWLG 60
Query 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
+A SM AATPQ+AWL TAGQAE A +QA AAASAYEAAF ATVPPP IAANR LLM
Sbjct 61 GAALSMAGAATPQIAWLNGTAGQAEHAAAQAAAAASAYEAAFAATVPPPVIAANRVLLME 120
Query 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGL 180
LLATNFLGQNT AIAATE QY EMWAQDAAAMYGYA SAAA L PF+PAA NPAG+
Sbjct 121 LLATNFLGQNTPAIAATETQYLEMWAQDAAAMYGYAAESAAAATLPPFDPAAPATNPAGV 180
Query 181 ASQAASVGQAVSGAA-----NAQALTD-IPKALFGLSGIFTNEPPWLTDLGKALGLTGHT 234
A+Q +V QAV+ +A ALTD +P L GL+G P+ G + G T
Sbjct 181 AAQEVAVAQAVASSAAAETQELSALTDAMPGTLAGLAGPQAAANPF----GNL--VNGGT 234
Query 235 WSSDGSGLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDL 294
DG G G ++ +TGS+ L +D F +WV P+RL +T F+D GL+H +
Sbjct 235 LELDGMG-------GALLESLTGSSTLHPGTPIDMFKEWVGPSRLFITIFRDLEGLSHSM 287
Query 295 --PKWASEGAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPA 352
A A AA A ALPA A+ SAGLSG AGAVG+A +VG L VP W A
Sbjct 288 APKAAAQAVAGAAKAAGSALPA---ALSSAGLSGPAGAVGKAVTVGALSVPQAW-ANVAP 343
Query 353 ASPAVLAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFN-NFAAPRYGFKPTVIAQPPA 411
A+ A NGL A+AA E +THA GG+P++GSG GR + NFAAPRYGFKP VI PPA
Sbjct 344 AATPAAATLNGLAASAAVEPATHAVGGVPMVGSGLGRGMSANFAAPRYGFKPAVIPHPPA 403
Query 412 GG 413
GG
Sbjct 404 GG 405
>gi|254773196|ref|ZP_05214712.1| PPE family protein [Mycobacterium avium subsp. avium ATCC 25291]
gi|212595880|gb|ACJ35530.1| PPE3 [Mycobacterium avium subsp. avium]
Length=421
Score = 296 bits (758), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 234/422 (56%), Positives = 284/422 (68%), Gaps = 17/422 (4%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
LDFAQLPPE+NS LMY+GPG+GP+LAAAAAW LAAEL++ A+++ + ITG+ D WQG
Sbjct 7 LDFAQLPPEINSGLMYSGPGAGPLLAAAAAWNGLAAELRSAAASFGSAITGVGDAGWQGP 66
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
+A+SM+AAA PQ+AWL TAG+AE A QA+AA SAYE AF TVPPP IAANRALL+ L
Sbjct 67 AASSMLAAAAPQLAWLSGTAGRAELAAGQALAAVSAYETAFAETVPPPVIAANRALLLQL 126
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
LATNFLGQNT AIA EAQY EMWAQDAAAMYGYA ASAAA+ L PF PA +PAGLA
Sbjct 127 LATNFLGQNTPAIADVEAQYGEMWAQDAAAMYGYALASAAASTLPPFEPAKPATDPAGLA 186
Query 182 SQAASVGQAVSGAA--NAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDG 239
QAA+ QA A AQ L P+++ L+ N PP + G +LG G + + +G
Sbjct 187 RQAAATAQAAGTGAGDRAQGLGAAPQSMSTLAAGTNNPPP--ANPGFSLG--GISLNPEG 242
Query 240 SGLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDL---PK 296
GL++GG LGD ++G+TGS LDAS D F + +SP RL T FKD G+A + K
Sbjct 243 DGLVIGGPLGDLLEGLTGSQTLDASTPFDAFIRLISPTRLFTTSFKDIQGIAQGMMPAAK 302
Query 297 WASEGAKAAGEAAKALPAAVP---AIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPAA 353
A EG A EA LPAAVP L + G+VG+AAS+GGL VPA W + P
Sbjct 303 SAGEGVAKAAEA--VLPAAVPGAGLGSLGSLGSIGGSVGKAASIGGLSVPASWASAAP-T 359
Query 354 SPAVLAASNGLGAAAAAEGSTHAFGGMPLM--GSGAGRAFNNFAAPRYGFKPTVIAQPPA 411
P+V A NG A AAE + A GG+P+M G+ A +F PRYGFKPTVIAQPPA
Sbjct 360 PPSVAVALNGATTAGAAEHAASAVGGVPMMPAGAAGRGAGAHFVVPRYGFKPTVIAQPPA 419
Query 412 GG 413
GG
Sbjct 420 GG 421
>gi|183985085|ref|YP_001853376.1| PPE family protein, PPE65 [Mycobacterium marinum M]
gi|183178411|gb|ACC43521.1| PPE family protein, PPE65 [Mycobacterium marinum M]
Length=418
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 219/421 (53%), Positives = 276/421 (66%), Gaps = 11/421 (2%)
Query 1 MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG 60
MLDFA LPPEVNS LMY+GPGSG MLAAAAAW+AL AELQ TA++Y +L++GL GPW G
Sbjct 1 MLDFALLPPEVNSTLMYSGPGSGSMLAAAAAWQALGAELQCTANSYRSLLSGLVSGPWSG 60
Query 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
+AA+M AAA P +AWL +TA QAEQ G QA AAASAYEAAF VPP +AANRA+L
Sbjct 61 PAAAAMSAAAAPHLAWLSATAAQAEQVGRQAAAAASAYEAAFAGMVPPAVVAANRAMLAT 120
Query 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGL 180
L+ATN GQNT AIA EA+YAEMWAQDA AMY YA +AAA L+ F P G
Sbjct 121 LVATNLFGQNTPAIAVVEAEYAEMWAQDANAMYQYAATAAAAADLTSFVPPRPATTANGP 180
Query 181 ASQAASVGQAVSG--AANAQAL----TDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHT 234
A+QAA+VG+A A +AQ+L +P AL GLS P L + +ALGL G
Sbjct 181 AAQAAAVGRATGDLLAGDAQSLQQLVEQLPNALRGLSEAALV--PSLERILRALGLIGWK 238
Query 235 WSSDGSGLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDL 294
W+ +G G+++ G LG + G+TGS+ LDAS +T+ + VSP RL T KD GL+H L
Sbjct 239 WTPNGDGIVLSGALGALIAGLTGSSTLDASTLSNTYIRLVSPFRLTTTALKDIDGLSHSL 298
Query 295 PKWASEGAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPA-A 353
A+ + A +A +ALP A+P +P +G+S G +G+AA +GGL VP W ++ P
Sbjct 299 FPAAAHAGQEAAKAVEALPQALPKLPLSGVSSGLGGIGRAAQIGGLSVPNAWASSMPGLG 358
Query 354 SPAVLAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAA-PRYGFKPTVIAQPPAG 412
A + S+ AAAAA+ S H FGG+P G+ A R F AA PRYGF P V+ +PPA
Sbjct 359 RVATVPLSSVAAAAAAADPSQHVFGGLPAHGTPA-RGFAASAAPPRYGFHPRVMTRPPAA 417
Query 413 G 413
G
Sbjct 418 G 418
>gi|118466000|ref|YP_879815.1| PPE family protein [Mycobacterium avium 104]
gi|118167287|gb|ABK68184.1| PPE family protein [Mycobacterium avium 104]
Length=421
Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 235/422 (56%), Positives = 287/422 (69%), Gaps = 17/422 (4%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
LDFAQLPPE+NS LMY+GPG+GP+LAAAAAW LAAEL++ A+++ ++ITG+ D WQG
Sbjct 7 LDFAQLPPEINSGLMYSGPGAGPLLAAAAAWNGLAAELRSAAASFGSVITGVGDAGWQGP 66
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
+A+SM+AAA PQ+AWL TAG+AE A QA+AA SAYE AF TVPPP IAANRALL+ L
Sbjct 67 AASSMMAAAAPQLAWLSGTAGRAELAAGQALAAVSAYETAFAETVPPPVIAANRALLLQL 126
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
LATNFLGQNT AIA EAQY EMWAQDAAAMYGYA ASAAA+ L PF PA +PAGLA
Sbjct 127 LATNFLGQNTPAIADVEAQYGEMWAQDAAAMYGYALASAAASTLPPFEPAKPATDPAGLA 186
Query 182 SQAASVGQAVSGAA--NAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDG 239
QAA+ QA A +AQ L P+++ L+ TN PP + G +LG G + + +G
Sbjct 187 RQAAATAQAAGTGAGDSAQGLGAAPQSMSTLAA-GTNNPP-AANPGFSLG--GISLNPEG 242
Query 240 SGLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDL---PK 296
GL++GG LGD ++G+TGS LDAS D F + +SP RL T FKD G+A + K
Sbjct 243 DGLVIGGPLGDLLEGLTGSQTLDASTPFDAFIRLISPTRLFTTSFKDIQGIAQGMMPAAK 302
Query 297 WASEGAKAAGEAAKALPAAVP---AIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPAA 353
A EG A EA LPAAVP L + G+VG+AAS+GGL VPA W + P
Sbjct 303 SAGEGVAKAAEA--VLPAAVPGAGLGSLGSLGSIGGSVGKAASIGGLSVPASWASAAP-T 359
Query 354 SPAVLAASNGLGAAAAAEGSTHAFGGMPLM--GSGAGRAFNNFAAPRYGFKPTVIAQPPA 411
P+V A NG A AAE + A GG+P+M G+ A +F PRYGFKPTVIAQPPA
Sbjct 360 PPSVAVALNGATTAGAAEHAASAVGGVPMMPAGAAGRGAGAHFVVPRYGFKPTVIAQPPA 419
Query 412 GG 413
GG
Sbjct 420 GG 421
>gi|118619369|ref|YP_907701.1| PPE family protein [Mycobacterium ulcerans Agy99]
gi|118571479|gb|ABL06230.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=418
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 216/421 (52%), Positives = 273/421 (65%), Gaps = 11/421 (2%)
Query 1 MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG 60
MLDFA LPP+VNS LMY+GPGSG MLAAAAAW+AL AELQ TA +Y +L++GL GPW G
Sbjct 1 MLDFALLPPKVNSTLMYSGPGSGSMLAAAAAWQALGAELQCTADSYRSLLSGLVSGPWSG 60
Query 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
+AA+M AAA P +AWL +TA QAEQ G QA AAASAYEAAF VPP +AANRA+L
Sbjct 61 PAAAAMSAAAAPHLAWLSATAAQAEQVGRQAAAAASAYEAAFAGMVPPAVVAANRAMLAT 120
Query 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGL 180
L+ATN GQNT AIA EA+YA+MWAQDA AMY YA +AAA L+ F P G
Sbjct 121 LVATNLFGQNTPAIAVVEAEYAKMWAQDANAMYQYAATAAAAADLTSFVPPRPATTANGP 180
Query 181 ASQAASVGQAVSG--AANAQAL----TDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHT 234
A+QAA+VG+A A +AQ+L +P AL GLS P L + +ALGL G
Sbjct 181 AAQAAAVGRATGDLLAGDAQSLQQLVEQLPNALRGLSEAALV--PSLERILRALGLIGWK 238
Query 235 WSSDGSGLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDL 294
W+ +G G+++ G LG + G TGS+ LDAS +T+ + VSP RL T KD GL+H L
Sbjct 239 WTPNGDGIVLSGALGALIAGPTGSSTLDASTLSNTYIRLVSPFRLTTTALKDIDGLSHSL 298
Query 295 PKWASEGAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPA-A 353
A+ + A +A +ALP A+P + +G+S G +G+AA +GGL VP W ++ P
Sbjct 299 FPAAAHAGQEAAKAVEALPQALPKLSLSGVSSGLGGIGRAAQIGGLSVPNAWASSMPGLG 358
Query 354 SPAVLAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAA-PRYGFKPTVIAQPPAG 412
A + S+ AAAAA+ S H FGG+P G+ A R F AA PRYGF P V+ +PPA
Sbjct 359 RVATVPLSSVAAAAAAADPSQHVFGGLPAHGTPA-RGFAASAAPPRYGFHPRVMTRPPAA 417
Query 413 G 413
G
Sbjct 418 G 418
>gi|41406540|ref|NP_959376.1| hypothetical protein MAP0442 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394889|gb|AAS02759.1| hypothetical protein MAP_0442 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=424
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 203/383 (54%), Positives = 250/383 (66%), Gaps = 14/383 (3%)
Query 38 ELQTTASTYDALITGLADGPWQGSSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASA 97
EL++ A+++ ++ITG+ D WQG +A+SM+AAA PQ+AWL TAG+AE A QA+AA SA
Sbjct 49 ELRSAAASFGSVITGVGDAGWQGPAASSMMAAAAPQLAWLSGTAGRAELAAGQALAAVSA 108
Query 98 YEAAFFATVPPPEIAANRALLMALLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAG 157
YE AF TVPPP IAANRALL+ LLATNFLGQNT AIA EAQY EMWAQD AAMYGYA
Sbjct 109 YETAFAETVPPPVIAANRALLLQLLATNFLGQNTPAIADVEAQYGEMWAQDTAAMYGYAL 168
Query 158 ASAAATQLSPFNPAAQTINPAGLASQAASVGQAVSGAA--NAQALTDIPKALFGLSGIFT 215
ASAAA+ L PF PA +PAGLA QAA+ QA A +AQ L P+ + L+
Sbjct 169 ASAAASTLPPFEPAKPATDPAGLARQAAATAQAAGTGAGDSAQGLGAAPQPMSTLAAGTN 228
Query 216 NEPPWLTDLGKALGLTGHTWSSDGSGLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVS 275
N PP + G +LG G + + +G GL++GG LGD ++G+TGS LDAS D F + +S
Sbjct 229 NPPP--ANPGFSLG--GISLNPEGDGLVIGGPLGDLLEGLTGSQTLDASTPFDAFIRLIS 284
Query 276 PARLMVTQFKDYFGLAHDL---PKWASEGAKAAGEAAKALPAAVPAIPSAGLSGVAGAVG 332
P RL T FKD G+A + K A EG A EA LPAAVP L + G+VG
Sbjct 285 PTRLFTTSFKDIQGIAQGMMPAAKSAGEGVAKAAEA--VLPAAVPGAGLGSLGSIGGSVG 342
Query 333 QAASVGGLKVPAVWTATTPAASPAVLAASNGLGAAAAAEGSTHAFGGMPLM--GSGAGRA 390
+AAS+GGL VPA W + P P+V A NG AAE + A GG+P+M G+ A
Sbjct 343 KAASIGGLSVPASWASAAP-TPPSVAVALNGATTTGAAEHAASAVGGVPMMPAGAAGRGA 401
Query 391 FNNFAAPRYGFKPTVIAQPPAGG 413
+F PRYGFKPTVIAQPPAGG
Sbjct 402 GAHFVVPRYGFKPTVIAQPPAGG 424
>gi|183980225|ref|YP_001848516.1| PPE family protein, PPE51_2 [Mycobacterium marinum M]
gi|183173551|gb|ACC38661.1| PPE family protein, PPE51_2 [Mycobacterium marinum M]
Length=381
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 179/416 (44%), Positives = 231/416 (56%), Gaps = 39/416 (9%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+DFA LPPEVNS LMY GPG+G +LAAA +W+ LA EL TTA TY+++++GL W G
Sbjct 1 MDFAMLPPEVNSGLMYTGPGAGSLLAAANSWDELAIELGTTAQTYESVLSGLTSMYWAGP 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
++ SM A A P V WL STA Q +Q +Q AAA A+E A+ TVPPP I ANR LM+L
Sbjct 61 ASESMAAKAAPYVWWLHSTAEQTQQTATQCRAAAMAFEQAYAMTVPPPVILANRMQLMSL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATNF GQNTAAIAA EAQYAEMW QDAAAMYGYA ++A A QL PF+ QT NPAGL+
Sbjct 121 VATNFFGQNTAAIAALEAQYAEMWEQDAAAMYGYATSAAMAAQLVPFSSPQQTTNPAGLS 180
Query 182 SQAASVGQAVSGAANAQALTD----IPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSS 237
+Q+A+V QA + AA A L+D + K L L+G F N P D G+
Sbjct 181 AQSAAVNQADATAAAANPLSDLIALVQKGLAALAGAFPNLLP--DDFSILDGIF------ 232
Query 238 DGSGLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKW 297
+G GV D + G ++++ M G A + P
Sbjct 233 --AGYATVGVSQDCESIIAGIIGAESNLGM--------------------LGAASENPAE 270
Query 298 ASEGAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPAASPAV 357
+ G G + P+ A+ +G V +VG+A S+G L VPA W A PA
Sbjct 271 LAPGDIGIGSVLSSAPSVGGAV--SGPGAVLVSVGRAGSIGQLSVPASWAA--PATRQVA 326
Query 358 LAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPPAGG 413
+S GL E + H GMP M G+ ++ PRYG + TV+A PPA G
Sbjct 327 ALSSAGLTTIPGTEEAAHGIPGMPGMPVGSSSRASSV-VPRYGVRLTVMAHPPAAG 381
>gi|183981862|ref|YP_001850153.1| PPE family protein [Mycobacterium marinum M]
gi|183175188|gb|ACC40298.1| PPE family protein [Mycobacterium marinum M]
Length=418
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 196/429 (46%), Positives = 243/429 (57%), Gaps = 28/429 (6%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+D+A LPPEVNSA MY GPGSGPMLAAA AW+ L+ EL + A+ Y + + + GPW+G
Sbjct 1 MDYAALPPEVNSARMYTGPGSGPMLAAALAWDGLSTELSSAAADYSSALAAMTSGPWRGP 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
++ SM +AA P +AW+ TA QA QA QA AAA AYEAAF TVPPP IAANRALL +L
Sbjct 61 ASTSMASAAAPYIAWMAGTATQALQASLQAKAAAGAYEAAFAVTVPPPMIAANRALLASL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPF-NPAAQTINPAGL 180
+ATN LGQNT AIAA EA Y EMWAQDAAAMYGYA A AT+L+PF +P T AGL
Sbjct 121 VATNLLGQNTPAIAAAEATYGEMWAQDAAAMYGYAACCATATRLTPFADPPPTTSPEAGL 180
Query 181 ASQAASVGQAVSGAANAQALTDIPKALFGL-----SGIFTNE--------PPWLTDLGKA 227
+QAA+ A S A+ +Q ++ +P AL GL SG+ E P L +
Sbjct 181 IAQAATTSSAQSQASLSQVMSMVPTALQGLASPSASGVTITEVAGALGLGAPQLDGIQSW 240
Query 228 LGLTGHTWSSDGSGLIVGGVLGDFVQGVTGSAELDASVAMDT--FGK-WVSPARLMVTQF 284
LGL G ++ SGL+ F G GS A A+ T G + +P T
Sbjct 241 LGLQGIDLTTP-SGLLA------FFNGTDGSPLGTAVNAITTNAIGSGFYTPGNFFGT-M 292
Query 285 KDYFGLAHDLPKWASEGAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPA 344
D+FGL+ A+E A A + A + V+ VG AAS+G L VP
Sbjct 293 CDFFGLSSFSAMDAAEDAAIAASSGLGGAAPGLGGFGGLGTAVSAGVGNAASIGSLSVPP 352
Query 345 VWTATTPAASPAVLAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPT 404
W AT+P + S GA A G GG+PL G G GR F+ PRYGFKPT
Sbjct 353 TWAATSPVGAAVATLPSVAAGAPLTAHGPASMLGGLPLSGFG-GRGFSE--VPRYGFKPT 409
Query 405 VIAQPPAGG 413
V+ PPA G
Sbjct 410 VVMHPPAAG 418
>gi|240172861|ref|ZP_04751520.1| PPE family protein, PPE31 [Mycobacterium kansasii ATCC 12478]
Length=401
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 148/240 (62%), Positives = 175/240 (73%), Gaps = 8/240 (3%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
LDFA LPPE+NSA MY+GPGSGPMLAAA+AW++LAAEL+ TA +Y +++ L W G
Sbjct 5 LDFAMLPPEINSARMYSGPGSGPMLAAASAWKSLAAELRATALSYHSVLAALTGEEWYGP 64
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
++ASM AAA P VAWL +TA QAEQ QA AAA AYEAAF ATVPPP IAANRA LMAL
Sbjct 65 ASASMAAAAAPYVAWLNTTAVQAEQTAVQAEAAAGAYEAAFGATVPPPVIAANRAQLMAL 124
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATN LGQNT AIAATEAQY EMWAQDA AMYGYAG+SAAATQLSPF Q NP+GLA
Sbjct 125 IATNILGQNTPAIAATEAQYTEMWAQDAMAMYGYAGSSAAATQLSPFVEPQQATNPSGLA 184
Query 182 SQAASVGQAVSGAANAQA------LTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTW 235
+QAA+V +A + +A Q+ ++ +P AL GLSG N WL + L +G W
Sbjct 185 AQAAAVTEASANSAGNQSSTLSGLISMVPSALQGLSG--PNSTSWLQVIWDLLTGSGPAW 242
>gi|296167733|ref|ZP_06849950.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897076|gb|EFG76691.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=406
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 183/439 (42%), Positives = 230/439 (53%), Gaps = 59/439 (13%)
Query 1 MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG 60
M+DF PPE NSA MY GPG + AAA+AW LAAEL +TA YD +IT L+ W G
Sbjct 1 MIDFGAAPPEYNSARMYTGPGPEALTAAASAWNGLAAELNSTALGYDKVITALSGEEWLG 60
Query 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
++ASM A P VAW+R+TA QAEQ +Q AAA+AYE A ATVPPP +AANRA
Sbjct 61 PASASMAQAVAPYVAWMRTTAAQAEQTANQMHAAATAYETALAATVPPPLVAANRAQTAQ 120
Query 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGL 180
LLATN LG NT AIA EAQY EMWAQDA+ MY YAG SAAAT+++PF A Q NP+
Sbjct 121 LLATNVLGLNTPAIAQLEAQYGEMWAQDASTMYSYAGQSAAATKVAPFTAAPQIANPSAQ 180
Query 181 ASQAASVGQAV--SGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSD 238
A+Q +V A S A++ Q++ LS ++ P L L T S+
Sbjct 181 ATQGTAVANATGNSAASSTQSV---------LSHAVSSTPNTLQALAAPAATQSSTTSAP 231
Query 239 GSG---LIVGGV-----LGDFVQGVTGSAEL--------DASVAMDTFGKWVSPARLMVT 282
S L+ G LG FV G + L SV M FG
Sbjct 232 FSEIWYLLTGQTTLPTSLGSFVNGYNPFSALWYNTEGLPYFSVGMGNFG----------V 281
Query 283 QFKDYFGLAHDLPKWASEGAKAAGEAAKALP----AAVPAIPSAGLSGVAGAVGQAASVG 338
Q GL + A A KALP A + A A+G AASVG
Sbjct 282 QIAKTTGLLNG-----------AAPAVKALPGLGGLGGLLGGGATAAHPAAALGNAASVG 330
Query 339 G-LKVPAVWTATTPAASPA-VLAASNGLGAAAAAEGSTHAFGGM--PLMGSGAGRAFNNF 394
G L VP W+A A++PA VL + + +AA +T A G + + +GAG +
Sbjct 331 GRLSVPVSWSA---ASTPAPVLGQAIPVSTVSAAPDATAAPGNLLGGMPLAGAGAGGHAG 387
Query 395 AAPRYGFKPTVIAQPPAGG 413
P+YGF+PTV+A+PP GG
Sbjct 388 VGPKYGFRPTVMARPPFGG 406
>gi|342861307|ref|ZP_08717955.1| PPE family protein [Mycobacterium colombiense CECT 3035]
gi|342131207|gb|EGT84488.1| PPE family protein [Mycobacterium colombiense CECT 3035]
Length=417
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 176/439 (41%), Positives = 227/439 (52%), Gaps = 49/439 (11%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+DF LPPE+NS MYAGPGSGPM+AAAAAW+ L AEL + AS Y ++I+ L PW G
Sbjct 1 MDFGALPPEINSGRMYAGPGSGPMMAAAAAWDGLGAELSSAASGYTSVISELTHAPWVGP 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
+++SM++A TP V+WL A QAE+ QA AAA+A+EAAF TVPPP IAANR LL L
Sbjct 61 ASSSMLSAVTPYVSWLSVLAAQAEETAGQARAAAAAFEAAFAMTVPPPVIAANRVLLANL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATNFLGQNT AIAATEAQY EMWAQDAAAMYGYAG+SA A++L P T P +
Sbjct 121 VATNFLGQNTPAIAATEAQYMEMWAQDAAAMYGYAGSSAVASELPPLTSPPNTTTPEADS 180
Query 182 SQ-----------AASVGQAVSGAANAQALT---------DIPKALFGLSGIFTNEPPWL 221
Q A + Q S A QAL+ G FT WL
Sbjct 181 DQAAAVAKAVAEPAGNTAQTTSQLATPQALSAGATQAVTQASTTTTATQPGPFT----WL 236
Query 222 TDLGKALGLTGHTWSSDGSGLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMV 281
+L +G ++ + G+ G ++ TG A S + +F W S A+ +
Sbjct 237 QNLINGFLTSGLPTPTNNYAGLNTGMYGTLLKQTTGLAYF--STGITSF--WSSIAQQLT 292
Query 282 TQFKDYFGLA----HDLPKWASEGAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASV 337
A P++AS G G + V+ VGQA V
Sbjct 293 FGPGGTTAGAGGAWFPTPQFASLGLGNLGGVGH-------------VGAVSAGVGQAGRV 339
Query 338 GGLKVPAVWTATTPAASPAVLAASNGLGAAAAAEGSTHAFG---GMPLMGSGAGRAFNNF 394
G L VP W T + SPA L+ AAA ++ A G GMP+ GS R
Sbjct 340 GMLSVPQHWATLTSSVSPAALSEEATPIQAAAGGANSPANGLLRGMPV-GSIGRRGAAAG 398
Query 395 AAPRYGFKPTVIAQPPAGG 413
+YGF+ +V+ +PP+ G
Sbjct 399 YVNKYGFRYSVLTRPPSAG 417
>gi|240171463|ref|ZP_04750122.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=408
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 199/428 (47%), Positives = 250/428 (59%), Gaps = 36/428 (8%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+D+A LPPEVNSA MY GPG GP+LAAA AW++L+ EL + A Y ++TG+ GPW+G
Sbjct 1 MDYAALPPEVNSARMYTGPGCGPILAAALAWDSLSGELSSAAKEYSIVVTGMTSGPWRGP 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
++++M AA P +AWL +TA QA QA QA AAA+AYEAAF TVPP EIAANRA L +L
Sbjct 61 ASSAMAAAVGPYIAWLATTASQAFQAAGQAKAAAAAYEAAFAMTVPPAEIAANRAQLASL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTIN-PAGL 180
+ATN LGQNT AIAATEA Y +MWAQDAAAMYGYA +SAAA+QL+PF A T + AG
Sbjct 121 VATNLLGQNTPAIAATEALYGQMWAQDAAAMYGYAASSAAASQLAPFADAPMTASGDAGA 180
Query 181 ASQAASVGQAVSGAANAQALTDIPKALFGL---SGIFTNEPPWLTDLGKAL----GLTGH 233
QAAS S A +Q + +P L GL +G T L LG + GL+G
Sbjct 181 LVQAASATSTASQGALSQVMQTVPATLQGLASPTGASTAGADLLGLLGSGMEDWIGLSGA 240
Query 234 TWSSDGSGLIVGGVLGDFVQGVTGSAELDASVAMDTFGK----WVSPARLMVTQFKDYFG 289
SS G+L F+ G GS L +++ F + +P + T D G
Sbjct 241 DLSSP------AGILA-FLSGTDGS-PLGVALSSVYFNALSSGFYTPGNFLGT-LADAVG 291
Query 290 LAHDLPKWASEGAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTAT 349
L + A +AA AA+A + + A V+ VG AA++G L VP WTAT
Sbjct 292 L-----QGAEAVEEAAAGAAEAAASELGAATGGVGGAVSAGVGNAATIGPLSVPPAWTAT 346
Query 350 TPAASPAVLAASNGLGAAAAAEGSTHA----FGGMPLMGSGAGRAFNNFAAPRYGFKPTV 405
+ + A SN AAA A G T A GGMPL G GA R F APRYGF+PTV
Sbjct 347 SSLGAAASALPSN---AAATAPGITGATPSMLGGMPLSGLGA-RGFAE--APRYGFRPTV 400
Query 406 IAQPPAGG 413
+ PPA G
Sbjct 401 MVHPPAAG 408
>gi|118617919|ref|YP_906251.1| PPE family protein [Mycobacterium ulcerans Agy99]
gi|118570029|gb|ABL04780.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=382
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 184/417 (45%), Positives = 233/417 (56%), Gaps = 40/417 (9%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+DF+ LPPEVNSA MY GPGSG +LAAAA+W+ALAAEL TTA T +++TGL D W+G
Sbjct 1 MDFSLLPPEVNSARMYTGPGSGSLLAAAASWDALAAELGTTAETCGSILTGLTDLSWRGP 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
++ SM A+A P V WL TA Q +QA QA AA A+E A+ TVPPP +AANRA L+ L
Sbjct 61 ASESMAASAAPCVGWLYRTAEQTQQAAIQARTAALAFEQAYAMTVPPPLVAANRAQLLVL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATNF GQNT+AIAA EAQYAEMWAQDAAAMYGYA SAAA L+PF+ Q +PAGLA
Sbjct 121 IATNFFGQNTSAIAANEAQYAEMWAQDAAAMYGYATTSAAAGMLTPFSSPNQATSPAGLA 180
Query 182 SQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGSG 241
+Q+ +V QA + AA +T + +L G P L D L +++ G
Sbjct 181 AQSTAVTQANATAAATDPITQLVSSLTQSLGAIQAIPSILPDDFTILDGVFSAYATVG-- 238
Query 242 LIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWASEG 301
V + F GV G A + G +PA + + FGL + A
Sbjct 239 --VTQDIESFCAGVIG-----AENNLGLIGSSENPAEVTPSD----FGLGSLISSTAPAS 287
Query 302 AKAAGEAAKALPAAVPAIPSAGL-SGVAGAVGQAASVGGLKVPAVWTA----TTPAASPA 356
A + G GL S VA +VG++ S+G L VP W+A A SP+
Sbjct 288 AASGG----------------GLGSAVAASVGRSGSIGQLSVPPSWSAPSARMVSALSPS 331
Query 357 VLAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPPAGG 413
L G AAAA + F GM + A RA PRYG + TV+A PPA G
Sbjct 332 GLTTIPGTEEAAAA--GSPGFPGM--VAPPATRASGVL--PRYGVRLTVMAHPPAAG 382
>gi|183981528|ref|YP_001849819.1| PPE family protein, PPE51 [Mycobacterium marinum M]
gi|183174854|gb|ACC39964.1| PPE family protein, PPE51 [Mycobacterium marinum M]
Length=382
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 184/417 (45%), Positives = 233/417 (56%), Gaps = 40/417 (9%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+DF+ LPPEVNSA MY GPGSG +LAAAA+W+ALAAEL TTA T +++TGL D W+G
Sbjct 1 MDFSLLPPEVNSARMYTGPGSGSLLAAAASWDALAAELGTTAETCGSILTGLTDLSWRGP 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
++ SM A+A P V WL TA Q +QA QA AA A+E A+ TVPPP +AANRA L+ L
Sbjct 61 ASESMAASAAPYVGWLYRTAEQTQQAAIQARTAALAFEQAYAMTVPPPLVAANRAQLLVL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATNF GQNT+AIAA EAQYAEMWAQDAAAMYGYA SAAA L+PF+ Q +PAGLA
Sbjct 121 IATNFFGQNTSAIAANEAQYAEMWAQDAAAMYGYATTSAAAGMLTPFSSPNQATSPAGLA 180
Query 182 SQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGSG 241
+Q+ +V QA + AA +T + +L G P L D L +++ G
Sbjct 181 AQSTAVTQANATAAATDPITQLVSSLTQSLGAIQAIPSILPDDFTILDGVFSAYATVG-- 238
Query 242 LIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWASEG 301
V + F GV G A + G +PA + + FGL + A
Sbjct 239 --VTQDIESFCAGVIG-----AENNLGLIGSSENPAEVTPSD----FGLGSLISSTAPAS 287
Query 302 AKAAGEAAKALPAAVPAIPSAGL-SGVAGAVGQAASVGGLKVPAVWTA----TTPAASPA 356
A + G GL S VA +VG++ S+G L VP W+A A SP+
Sbjct 288 AASGG----------------GLGSAVAASVGRSGSIGQLSVPPSWSAPSARMVSALSPS 331
Query 357 VLAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPPAGG 413
L G AAAA + F GM + A RA PRYG + TV+A PPA G
Sbjct 332 GLTTIPGTEEAAAA--GSPGFPGM--VAPPATRASGVL--PRYGVRLTVMAHPPAAG 382
>gi|296170357|ref|ZP_06851948.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895080|gb|EFG74799.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=459
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 181/391 (47%), Positives = 222/391 (57%), Gaps = 55/391 (14%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+D+ LPPE+NSA MYAGPGSG ML AAAAW+ LA EL++ A++Y A+I+GL W G
Sbjct 1 MDYGVLPPEINSARMYAGPGSGSMLTAAAAWDELATELRSIAASYSAVISGLTTA-WLGP 59
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
S+ M AAA P AWL +TA QAEQ+GSQA AAA+AYEAAF ATVPPP I NRA L +L
Sbjct 60 SSTRMAAAAAPYAAWLNATAAQAEQSGSQARAAAAAYEAAFAATVPPPVIETNRAELESL 119
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATN GQNTAAIAA EA+YA MWAQDAAAMYGYAG SAAA ++PF+P AQ NPAG A
Sbjct 120 IATNTFGQNTAAIAANEARYARMWAQDAAAMYGYAGQSAAAAAVTPFDPPAQNTNPAGTA 179
Query 182 SQAASVGQAV--SGAANAQA----LTD-IPKALFGLSGIFTNEPPWLTDLGKALGLTGHT 234
Q A+V Q V S N+QA LT P AL L+ PP + L L +
Sbjct 180 GQTAAVSQVVGTSAGTNSQAALSHLTSATPSALRSLAAPAAVNPPSASSLASFLSSLNSS 239
Query 235 WSSDGSGLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDL 294
+ + G+ EL K V PA ++ GL
Sbjct 240 PLAK----------------LAGNVEL--------IPKAVLPANDVL--ISTIMGLV--- 270
Query 295 PKWASEGAKAAGEAAKALPAAVPAIPSAGL--------SGVAGAVGQAASVGGLKVPAVW 346
GA+ G+ A+ AA P + +AGL S V+ VGQA VGGL VP W
Sbjct 271 -----IGARHLGDLTVAVKAATPGL-AAGLGYAAPALGSTVSATVGQAGLVGGLAVPPSW 324
Query 347 TATTPAASP--AVLA--ASNGLGAAAAAEGS 373
TPA AVL+ + + + AA +EGS
Sbjct 325 AVATPAIRTVAAVLSGTSESAVAAATVSEGS 355
>gi|167967397|ref|ZP_02549674.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|253799148|ref|YP_003032149.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|254231990|ref|ZP_04925317.1| PPE family protein [Mycobacterium tuberculosis C]
24 more sequence titles
Length=410
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 122/178 (69%), Positives = 140/178 (79%), Gaps = 0/178 (0%)
Query 1 MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG 60
MLDF LPPE+NS MYAGPGSGP+LAAAAAW+ALAAEL + A++Y + I GL PW G
Sbjct 1 MLDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMG 60
Query 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
S+ +M AA P VAW+ TAGQAEQAG+QA AA YE AF ATVPPP I ANRALLM+
Sbjct 61 PSSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMS 120
Query 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPA 178
L+ATN GQNT AIAATEA YAEMWAQDAAAMYGYAG+SA A+QL+PF+ QT NP+
Sbjct 121 LVATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPS 178
>gi|294996719|ref|ZP_06802410.1| PPE family protein [Mycobacterium tuberculosis 210]
gi|13377907|gb|AAK20893.1| Rv1808-like protein [Mycobacterium microti]
gi|13377909|gb|AAK20894.1| Rv1808-like protein [Mycobacterium microti]
gi|339294744|gb|AEJ46855.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339298372|gb|AEJ50482.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length=410
Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 122/178 (69%), Positives = 140/178 (79%), Gaps = 0/178 (0%)
Query 1 MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG 60
MLDF LPPE+NS MYAGPGSGP+LAAAAAW+ALAAEL + A++Y + I GL PW G
Sbjct 1 MLDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMG 60
Query 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
S+ +M AA P VAW+ TAGQAEQAG+QA AA YE AF ATVPPP I ANRALLM+
Sbjct 61 PSSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMS 120
Query 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPA 178
L+ATN GQNT AIAATEA YAEMWAQDAAAMYGYAG+SA A+QL+PF+ QT NP+
Sbjct 121 LVATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPS 178
>gi|308372058|ref|ZP_07427232.2| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308334577|gb|EFP23428.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
Length=399
Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 122/178 (69%), Positives = 140/178 (79%), Gaps = 0/178 (0%)
Query 1 MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG 60
MLDF LPPE+NS MYAGPGSGP+LAAAAAW+ALAAEL + A++Y + I GL PW G
Sbjct 1 MLDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMG 60
Query 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
S+ +M AA P VAW+ TAGQAEQAG+QA AA YE AF ATVPPP I ANRALLM+
Sbjct 61 PSSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMS 120
Query 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPA 178
L+ATN GQNT AIAATEA YAEMWAQDAAAMYGYAG+SA A+QL+PF+ QT NP+
Sbjct 121 LVATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPS 178
>gi|183982688|ref|YP_001850979.1| PPE family protein, PPE31_1 [Mycobacterium marinum M]
gi|183176014|gb|ACC41124.1| PPE family protein, PPE31_1 [Mycobacterium marinum M]
Length=422
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 180/435 (42%), Positives = 241/435 (56%), Gaps = 36/435 (8%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+DFA LPPE+NS MY+GPGS PMLAA AW+ LAAEL++TA+ Y+ +I L W G
Sbjct 1 MDFAALPPEINSIRMYSGPGSAPMLAAVTAWDGLAAELRSTAAAYETVIAVLTGDGWLGP 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
++ SM AA P +AW+ T QAEQ QA AAA A+EAAF TVPP ++AANR L L
Sbjct 61 ASESMEAAVFPYLAWMNITGMQAEQTARQAAAAAGAFEAAFAMTVPPAQVAANRTQLQTL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATN LGQNT AIAATEA Y EMWAQDAAAMYGYA SAAA+ L+ F AQT +P+GLA
Sbjct 121 VATNLLGQNTPAIAATEAAYGEMWAQDAAAMYGYAVGSAAASTLTQFTQPAQTTDPSGLA 180
Query 182 SQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGSG 241
SQ+A+V QAV T++P+ + + P L L + + GSG
Sbjct 181 SQSAAVTQAVGSTVGNLTQTELPQ-------LMSAVPASLQGLASPAAASPID-AIPGSG 232
Query 242 LIVGGVLGDFVQGVTGSAE---LDASVAMDTF--GKWVSPARL---MVTQFKDYFGLAHD 293
L+ L +F+ G G+ L++S+ ++ F +VSPA + + D +A
Sbjct 233 LL--AALLNFLDGNDGNPYGVFLNSSL-VNGFVSAGYVSPAVVGPAIWAAMADINAVALG 289
Query 294 LPKWASEGAKAAGEAAKA-LPAAVPAIPSA------------GLSGVAGAVGQAASVGGL 340
+ A+ +GE + +PAA PA P + G G++ + QA VG +
Sbjct 290 AQESAAVPPMGSGEGNPSWIPAASPASPESLPVLGEETAATLGTGGISAGMNQAELVGRM 349
Query 341 KVPAVW-TATTPAASPAVLAASNGLGAAAAAEGSTHAFGGMPLMGSGA-GRAFNNFAAPR 398
VP W AT A A G + A + G+P M +G G N APR
Sbjct 350 SVPQSWGVATAVANHAGAAAPGGGWTSTAVVPEAAVGMPGIPGMPAGIYGHNLGN--APR 407
Query 399 YGFKPTVIAQPPAGG 413
YGF+PT++ +PPA G
Sbjct 408 YGFRPTIMGRPPAAG 422
>gi|307084423|ref|ZP_07493536.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012]
gi|308365983|gb|EFP54834.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012]
Length=336
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/178 (69%), Positives = 140/178 (79%), Gaps = 0/178 (0%)
Query 1 MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG 60
MLDF LPPE+NS MYAGPGSGP+LAAAAAW+ALAAEL + A++Y + I GL PW G
Sbjct 1 MLDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMG 60
Query 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
S+ +M AA P VAW+ TAGQAEQAG+QA AA YE AF ATVPPP I ANRALLM+
Sbjct 61 PSSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMS 120
Query 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPA 178
L+ATN GQNT AIAATEA YAEMWAQDAAAMYGYAG+SA A+QL+PF+ QT NP+
Sbjct 121 LVATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPS 178
>gi|31792997|ref|NP_855490.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|121637710|ref|YP_977933.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990194|ref|YP_002644881.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
29 more sequence titles
Length=409
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 120/177 (68%), Positives = 139/177 (79%), Gaps = 0/177 (0%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+DF LPPE+NS MYAGPGSGP+LAAAAAW+ALAAEL + A++Y + I GL PW G
Sbjct 1 MDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
S+ +M AA P VAW+ TAGQAEQAG+QA AA YE AF ATVPPP I ANRALLM+L
Sbjct 61 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPA 178
+ATN GQNT AIAATEA YAEMWAQDAAAMYGYAG+SA A+QL+PF+ QT NP+
Sbjct 121 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPS 177
>gi|57116921|ref|YP_177844.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|148661614|ref|YP_001283137.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148823021|ref|YP_001287775.1| PPE family protein [Mycobacterium tuberculosis F11]
9 more sequence titles
Length=409
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 120/177 (68%), Positives = 139/177 (79%), Gaps = 0/177 (0%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+DF LPPE+NS MYAGPGSGP+LAAAAAW+ALAAEL + A++Y + I GL PW G
Sbjct 1 MDFGALPPEINSGRMYAGPGSGPLLAAAAAWDALAAELYSAAASYGSTIEGLTVAPWMGP 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
S+ +M AA P VAW+ TAGQAEQAG+QA AA YE AF ATVPPP I ANRALLM+L
Sbjct 61 SSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLMSL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPA 178
+ATN GQNT AIAATEA YAEMWAQDAAAMYGYAG+SA A+QL+PF+ QT NP+
Sbjct 121 VATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATASQLAPFSEPPQTTNPS 177
>gi|183982690|ref|YP_001850981.1| PPE family protein, PPE31 [Mycobacterium marinum M]
gi|183176016|gb|ACC41126.1| PPE family protein, PPE31 [Mycobacterium marinum M]
Length=386
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 181/424 (43%), Positives = 226/424 (54%), Gaps = 54/424 (12%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
LDFA LPPE+NSA MY+GPGS PMLAAA+AW+ LAAEL+ T +YD+++ L W G
Sbjct 5 LDFATLPPEINSARMYSGPGSAPMLAAASAWKGLAAELRVTVLSYDSVLRALTGEEWYGP 64
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
++ASM AAA P VAW+ +TA QAE++ QA AAA+AYEAAF ATV P I ANRA LM L
Sbjct 65 ASASMAAAAAPYVAWMSTTAAQAEESAVQAAAAAAAYEAAFSATVAPTVITANRAQLMVL 124
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATN LGQNT AIAA EAQY EMWAQDA AMYGYAG+SAAAT+LS F NPAGL
Sbjct 125 VATNVLGQNTPAIAAVEAQYCEMWAQDAMAMYGYAGSSAAATRLSEFLEPQHNTNPAGLL 184
Query 182 SQAASVGQAVSGAANA-QALTDIPKALFGLSGIFT-----NEPPWLTDLGKALGLTGHTW 235
+Q +++ Q +S N Q L + SG+ + N WL L G + W
Sbjct 185 AQQSTLAQLMSAVPNVLQGLASSNTSASAPSGLLSTLLSGNGQSWLATLWSEFGPNANIW 244
Query 236 SSDGSGLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFG----LA 291
++ S TG ++ P+ MVT F G
Sbjct 245 NTIAS---------------TG---------------FLLPSN-MVTPFLGMLGTAAVAD 273
Query 292 HDLPKWASEGAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTP 351
+ G+ A G A A +V +G A VG+ L VP WT P
Sbjct 274 AAEDALGTTGSGALGGALSAPLGSVGGQAGLAAAGNAAIVGK------LSVPPSWTGAAP 327
Query 352 AASPAVLAASNGLGAAAAAEGSTHAFGGMP--LMGSGAGRAFNNFAAPRYGFKPTVIAQP 409
ASP + LG A GMP G+ AG+ F A P+YGF+PT +A+P
Sbjct 328 LASP----LGSALGGTPMVAPPPTAAAGMPGVPFGNMAGQPFGR-ALPQYGFRPTFVARP 382
Query 410 PAGG 413
PA G
Sbjct 383 PAAG 386
>gi|306782177|ref|ZP_07420514.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|306790362|ref|ZP_07428684.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|306794889|ref|ZP_07433191.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|308325139|gb|EFP13990.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|308333218|gb|EFP22069.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308336675|gb|EFP25526.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
Length=380
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 178/423 (43%), Positives = 229/423 (55%), Gaps = 54/423 (12%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+DFA LPPEVNSA MY GPG+G +LAAA W++LAAEL TTA Y ++++GLA W+G
Sbjct 1 MDFALLPPEVNSARMYTGPGAGSLLAAAGGWDSLAAELATTAEAYGSVLSGLAALHWRGP 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
+A SM A P + WL +TA + +Q QA AAA A+E A+ T+PPP +AANR L+AL
Sbjct 61 AAESMAVTAAPYIGWLYTTAEKTQQTAIQARAAALAFEQAYAMTLPPPVVAANRIQLLAL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATNF GQNTAAIAATEAQYAEMWAQDAAAMYGYA ASAAA L+PF+P QT NPAGL
Sbjct 121 IATNFFGQNTAAIAATEAQYAEMWAQDAAAMYGYATASAAAALLTPFSPPRQTTNPAGLT 180
Query 182 SQAASVGQA-------VSGAANA-QALTD---IPKALFGLSGIFTNEPPWLTDLGKALGL 230
+QAA+V QA + A A QALT IP+ L IF
Sbjct 181 AQAAAVSQATDPLSLLIETATQALQALTIPSFIPEDFTFLDAIF---------------- 224
Query 231 TGHTWSSDGSGLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGL 290
+G GV D V G+ ++++ + G +PA + FG+
Sbjct 225 ---------AGYATVGVTQDVESFVAGTIGAESNLGLLNVGD-ENPAEVT----PGDFGI 270
Query 291 AHDLPKWASEGAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATT 350
+ + G +A A A + S G A ++GQ L VP W A
Sbjct 271 GELVSATSPGGGVSASGAGGAASVGNTVLASVGR---ANSIGQ------LSVPPSWAA-- 319
Query 351 PAASPAVLAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPP 410
P+ P + GL + + H G+P + AGRA PRYG + TV+A PP
Sbjct 320 PSTRPVSALSPAGLTTLPGTDVAEHGMPGVPGVPVAAGRASGVL--PRYGVRLTVMAHPP 377
Query 411 AGG 413
A G
Sbjct 378 AAG 380
>gi|15843090|ref|NP_338127.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|13883435|gb|AAK47941.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
Length=393
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 176/422 (42%), Positives = 234/422 (56%), Gaps = 38/422 (9%)
Query 1 MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG 60
M+DF LPPE+NSA MYAGPGS ++AAA W+++A++L + AS + +++ GL G W G
Sbjct 1 MVDFGALPPEINSARMYAGPGSASLVAAAKMWDSVASDLFSAASAFQSVVWGLTTGSWIG 60
Query 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
SSA MVAAA+P VAW+ TAGQAE +Q AA+AYE A+ TVPPP IA NRA LM
Sbjct 61 SSAGLMVAAASPYVAWMSVTAGQAELTAAQVRVAAAAYETAYGLTVPPPVIAENRAELMI 120
Query 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQ-LSPFNPAAQTINPAG 179
L+ATN LGQNT AIA EA+Y EMWAQDAAAM+GYA A+A AT+ L PF A NP G
Sbjct 121 LIATNLLGQNTPAIAVNEAEYGEMWAQDAAAMFGYAAATATATEALLPFEDAPLITNPGG 180
Query 180 LASQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPW--LTDLGKALGLTGHTWSS 237
L QA +V +A+ AA Q + ++P+AL L+ + P+ L++L KA+ + H
Sbjct 181 LLEQAVAVEEAIDTAAANQLMNNVPQALQQLAQPTKSIWPFDQLSELWKAI--SPHL--- 235
Query 238 DGSGLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKW 297
L + V + L+ V+M G VS A + + K + P
Sbjct 236 --------SPLSNIV------SMLNNHVSMTNSG--VSMASTLHSMLKGFA------PAA 273
Query 298 ASEGAKAAGEAAKALPAAVPAIPSAGL-----SGVAGAVGQAASVGGLKVPAVWTATTPA 352
A AA +A+ + + S+ +GVA +G+AASVG L VP W A A
Sbjct 274 AQAVETAAZNGVQAMSSLGSQLGSSLGSSGLGAGVAANLGRAASVGSLSVPQAWAAANQA 333
Query 353 ASPAVLAASNGLGAAAAAEGSTHAFGGMPLMGS-GAGRAFNNFAAPRYGFKPTVIAQPPA 411
+PA A +AA H GG+PL S AG NN A R + I + PA
Sbjct 334 VTPAARALPLTSLTSAAQTAPGHMLGGLPLGHSVNAGSGINN--ALRVPARAYAIPRTPA 391
Query 412 GG 413
G
Sbjct 392 AG 393
>gi|240169314|ref|ZP_04747973.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=383
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 177/425 (42%), Positives = 222/425 (53%), Gaps = 57/425 (13%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+DF LPPEVNS MYAGPG G + AAA W++LAAEL TA Y ++I GL G W G
Sbjct 1 MDFGALPPEVNSVRMYAGPGPGSLAAAAGMWDSLAAELHATAGHYRSVIAGLTSGRWLGP 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
++ SM +A P VAW A +A + SQAV A YEAAF TVPPP +AANRALL AL
Sbjct 61 ASLSMASALGPYVAWTAGVAARAAETASQAVLAVEGYEAAFAMTVPPPVVAANRALLAAL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATNF GQN+ AIAATEA+Y MWAQDAAAMY YA SA A +L+ + INP GLA
Sbjct 121 VATNFFGQNSTAIAATEAEYGVMWAQDAAAMYEYAANSATACELTLLISPPEVINPVGLA 180
Query 182 SQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGSG 241
Q+ +V A + + Q L+G+ ++ P L L L
Sbjct 181 GQSTAVAHAAAASGAEQ---------LSLAGLVSSVPAMLDGLASPL------------- 218
Query 242 LIVGGVLGDFVQGVTGSAELDASV--AMDTFGKWVSPARLM-----VTQFKDYFGLAHDL 294
+G AE +S+ + T + P+ M + G+A
Sbjct 219 --------------SGLAESSSSLMPTLATVPVYALPSYFMAAATPLYSLSSILGMAQTA 264
Query 295 PKWASEGAKAAGEAAKALPAAVPA----IPSAGLSGVAGAVGQAASVGGLKVPAVWTATT 350
AS A AA AA+ AV + I S G GV G++G AAS+G L VPA WT+
Sbjct 265 QGLASGAAAAAQAAAEGAAGAVSSGAGLIASVG-PGVVGSMGNAASLGPLSVPASWTSVI 323
Query 351 PAASPAVLAA-SNGLGAAAAAEGSTHAFGGMPLMG-SGAGRAFNNFAAPRYGFKPTVIAQ 408
P A+ AA NGL AA AA G P G +G GR+ PRYG PTV+ +
Sbjct 324 PTANMGAAAALPNGLDAANAAP---SLLGAAPRSGLTGPGRSVG----PRYGIVPTVMTR 376
Query 409 PPAGG 413
PPA G
Sbjct 377 PPAAG 381
>gi|212595976|gb|ACJ35541.1| PPE16 [Mycobacterium avium subsp. avium]
Length=392
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 159/354 (45%), Positives = 199/354 (57%), Gaps = 30/354 (8%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+DFA LPPEVNSA MYAGPGSGPMLAAA AW+ LAA L +TA +Y A IT L GPW G
Sbjct 1 MDFAVLPPEVNSARMYAGPGSGPMLAAAMAWDELAATLHSTADSYQAEITALTSGPWVGP 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
SAA+M+AA TP + W+R+T QAE+ + A AAA AYE AF TVPPP + ANR LL L
Sbjct 61 SAAAMIAAITPYLTWMRTTGAQAEETANNARAAAFAYETAFAETVPPPVVTANRTLLAQL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATN LGQNT AIA TEA+YAEMWA+DAAAMYGYAGA+AAAT+L+PF T N
Sbjct 121 VATNILGQNTPAIATTEAEYAEMWARDAAAMYGYAGAAAAATRLTPFTQPDPTTNSGADQ 180
Query 182 SQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGSG 241
SQA S A + + +T P F+ P L +L + G D S
Sbjct 181 SQAVSKAAATAAGSTRNTVTQQP---------FSAVPNMLNNLAVSPNALG-----DPSV 226
Query 242 LIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFK-----DYFGLAHDLPK 296
+ G+ D + + LDA ++ G +P+ + F F +
Sbjct 227 TDLLGLESDLI-----AIFLDAPASVVGMGV-DAPSATIALPFDIAGALTGFHTDDIVSG 280
Query 297 WASEGAKAAGEAAKALPAAVPAI--PSAGLSGVAGA-VGQAASVGGLKVPAVWT 347
WA G + P+ P I P+ G +A A +GQA +VG L VP WT
Sbjct 281 WA--GVQPWPGTGAVPPSPFPVITNPAGGFGTLASAGLGQAKTVGTLSVPPTWT 332
>gi|118466099|ref|YP_881935.1| PPE family protein [Mycobacterium avium 104]
gi|118167386|gb|ABK68283.1| ppe family protein [Mycobacterium avium 104]
Length=461
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 161/358 (45%), Positives = 197/358 (56%), Gaps = 38/358 (10%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+DFA LPPEVNSA MYAGPGSGPMLAAA AW+ LAA L +TA +Y A IT L GPW G
Sbjct 1 MDFAVLPPEVNSARMYAGPGSGPMLAAAMAWDELAATLHSTADSYQAEITALTSGPWVGP 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
SAA+M+AA TP + W+R+T QAE+ + A AAA AYE AF TVPPP + ANR LL L
Sbjct 61 SAAAMIAAITPYLTWMRTTGAQAEETANNARAAAFAYETAFAETVPPPVVTANRTLLAQL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATN LGQNT AIA TEA+YAEMWA+DAAAMYGYAGA+AAAT+L+PF T N
Sbjct 121 VATNILGQNTPAIATTEAEYAEMWARDAAAMYGYAGAAAAATRLTPFTQPDPTTNSGADQ 180
Query 182 SQAASVGQ-----AVSGAANAQALTDIPKALFGLSGIFTNE--PPWLTDLGKALGLTGHT 234
SQA S + Q + +P L L+ + N P +TDL LGL
Sbjct 181 SQAVSKAAATAAGSTRNTVTQQPFSAVPNMLNNLA-VSPNALGDPSVTDL---LGLESDL 236
Query 235 WSS--DGSGLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAH 292
+ D +VG +G T + D + A+ F D
Sbjct 237 IAIFLDAPASVVG--MGVDAPSATIALPFDIAGALTGF------------HTDDIVSGWA 282
Query 293 DLPKWASEGAKAAGEAAKALPAAVPAI--PSAGLSGVAGA-VGQAASVGGLKVPAVWT 347
+ W GA P+ P I P+ G +A A +GQA +VG L VP WT
Sbjct 283 GVQPWPGTGAVP--------PSPFPVITNPAGGFGTLASAGLGQAKTVGTLSVPPTWT 332
>gi|57116920|ref|YP_177653.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|38684069|emb|CAE55432.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=399
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 197/423 (47%), Positives = 252/423 (60%), Gaps = 35/423 (8%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
LDFA LPPE+NSA MY+G GS PMLAAA+AW L+AEL+ +A +Y ++++ L W G
Sbjct 1 LDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
++ASM AAA P VAW+ TA +AEQAG+QA AAA+AYEAAF ATVPPP I ANRA LMAL
Sbjct 61 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEAAAAAYEAAFAATVPPPVIEANRAQLMAL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATN LGQN AIAATEAQYAEMW+QDA AMYGYAGASAAATQL+PF QT N +GLA
Sbjct 121 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATQLTPFTEPVQTTNASGLA 180
Query 182 SQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGSG 241
+Q+A++ A +A AQ T LS + P L L + T T++S SG
Sbjct 181 AQSAAIAHATGASAGAQQTT--------LSQLIAAIPSVLQGLSSS---TAATFASGPSG 229
Query 242 LIVGGVLGDFVQGVTGSAELDASVAM----DTFGKWVSPARLMV--TQFKDYFGLAHDLP 295
L+ G++G +GS+ LD A+ F ++ + L + + GL +
Sbjct 230 LL--GIVG------SGSSWLDKLWALLDPNSNFWNTIASSGLFLPSNTIAPFLGLLGGVA 281
Query 296 KWASE----GAKAAGEAAKALPAAVPAIPSAGLSG-VAGAVGQAASVGGLKVPAVWTATT 350
+ G +G AL A P + GL G VA +G AA+VG L VP WTA
Sbjct 282 AADAAGDVLGEATSGGLGGALVA--PLGSAGGLGGTVAAGLGNAATVGTLSVPPSWTAAA 339
Query 351 PAASPAVLAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPP 410
P ASP + +A G A GMP G+ G+ F A P+YGF+P +A+PP
Sbjct 340 PLASP-LGSALGGTPMVAPPPAVAAGMPGMPF-GTMGGQGFGR-AVPQYGFRPNFVARPP 396
Query 411 AGG 413
A G
Sbjct 397 AAG 399
>gi|148661613|ref|YP_001283136.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|167967398|ref|ZP_02549675.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|307084422|ref|ZP_07493535.1| PPE family protein [Mycobacterium tuberculosis SUMu012]
gi|7478807|pir||H70931 probable PPE protein - Mycobacterium tuberculosis (strain H37RV)
gi|148505765|gb|ABQ73574.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|308365982|gb|EFP54833.1| PPE family protein [Mycobacterium tuberculosis SUMu012]
Length=403
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 197/423 (47%), Positives = 252/423 (60%), Gaps = 35/423 (8%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
LDFA LPPE+NSA MY+G GS PMLAAA+AW L+AEL+ +A +Y ++++ L W G
Sbjct 5 LDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 64
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
++ASM AAA P VAW+ TA +AEQAG+QA AAA+AYEAAF ATVPPP I ANRA LMAL
Sbjct 65 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEAAAAAYEAAFAATVPPPVIEANRAQLMAL 124
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATN LGQN AIAATEAQYAEMW+QDA AMYGYAGASAAATQL+PF QT N +GLA
Sbjct 125 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATQLTPFTEPVQTTNASGLA 184
Query 182 SQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGSG 241
+Q+A++ A +A AQ T LS + P L L + T T++S SG
Sbjct 185 AQSAAIAHATGASAGAQQTT--------LSQLIAAIPSVLQGLSSS---TAATFASGPSG 233
Query 242 LIVGGVLGDFVQGVTGSAELDASVAM----DTFGKWVSPARLMV--TQFKDYFGLAHDLP 295
L+ G++G +GS+ LD A+ F ++ + L + + GL +
Sbjct 234 LL--GIVG------SGSSWLDKLWALLDPNSNFWNTIASSGLFLPSNTIAPFLGLLGGVA 285
Query 296 KWASE----GAKAAGEAAKALPAAVPAIPSAGLSG-VAGAVGQAASVGGLKVPAVWTATT 350
+ G +G AL A P + GL G VA +G AA+VG L VP WTA
Sbjct 286 AADAAGDVLGEATSGGLGGALVA--PLGSAGGLGGTVAAGLGNAATVGTLSVPPSWTAAA 343
Query 351 PAASPAVLAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPP 410
P ASP + +A G A GMP G+ G+ F A P+YGF+P +A+PP
Sbjct 344 PLASP-LGSALGGTPMVAPPPAVAAGMPGMPF-GTMGGQGFGR-AVPQYGFRPNFVARPP 400
Query 411 AGG 413
A G
Sbjct 401 AAG 403
>gi|336457435|gb|EGO36444.1| PPE-repeat containing protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=461
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/203 (61%), Positives = 144/203 (71%), Gaps = 0/203 (0%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+DFA LPPEVNSA MYAGPGSGPMLAAA AW+ LAA L +TA +Y A IT L GPW G
Sbjct 1 MDFAVLPPEVNSARMYAGPGSGPMLAAAMAWDELAATLHSTADSYQAEITALTSGPWVGP 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
SAA+M+AA TP + W+R+T QAE+ + A AAA AYE AF TVPPP + ANR LL L
Sbjct 61 SAAAMIAAITPYLTWMRTTGAQAEETANNARAAAFAYETAFAETVPPPVVTANRTLLAQL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATN LGQNT AIA TEA+YAEMWA+DAAAMYGYAGA+AAAT+L+PF T N
Sbjct 121 VATNILGQNTPAIATTEAEYAEMWARDAAAMYGYAGAAAAATRLTPFTQPDPTTNSGADQ 180
Query 182 SQAASVGQAVSGAANAQALTDIP 204
SQA S A + + +T P
Sbjct 181 SQAVSKAAATAAGSTRNTVTQQP 203
>gi|254821012|ref|ZP_05226013.1| PPE family protein, PPE31 [Mycobacterium intracellulare ATCC
13950]
gi|212596828|gb|ACJ35609.1| PPE48 [Mycobacterium intracellulare ATCC 13950]
Length=389
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 190/429 (45%), Positives = 240/429 (56%), Gaps = 57/429 (13%)
Query 1 MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG 60
+DFA LPPE+NSA MYAGPGSGPML AA+AW LAAEL++ A +Y + ++ L W G
Sbjct 2 FVDFATLPPEINSARMYAGPGSGPMLVAASAWNGLAAELRSAALSYGSALSSLTSEEWHG 61
Query 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
++A+MVAAATP VAW+ +TA QAEQA +QA AAA+AYEAAF ATVPPP IAANRA L
Sbjct 62 PASAAMVAAATPYVAWMSTTATQAEQAATQAEAAAAAYEAAFAATVPPPAIAANRAQLAT 121
Query 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGL 180
L+ATN LGQNT AIAATEAQY EMWAQDAA MYGYAG+SAAAT+L F QT + G
Sbjct 122 LIATNVLGQNTPAIAATEAQYGEMWAQDAATMYGYAGSSAAATRLPMFTDPTQTTSQDGQ 181
Query 181 ASQAASVGQAV-SGAANAQAL-----TDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHT 234
A QAA+V QA + A N QA T +P AL LS + + L L +
Sbjct 182 ARQAAAVAQATGTSAGNQQATVSQLNTAVPNALQTLSSPTESSTGSTSGLSSILDPNSNF 241
Query 235 WSSDGSGLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDL 294
W++ +T + LD + + T V+ + L+ LA
Sbjct 242 WNT-----------------ITSTGALDPAQVVQT----VTSSTLIGASTSALNDLASGA 280
Query 295 PKWASEGAKAAGEAAKALPAAVPAIPSAGLSGVAGA-------VGQAASVGGLKVPAVWT 347
P A G +A++L +GL+GV A +G+A+ VG L VP W
Sbjct 281 PV-----ATGIGTSAQSL---------SGLAGVGNAGASVSAGLGRASLVGPLSVPPSWA 326
Query 348 ATTPAASPAVLAASNGLGAAAAAEGSTHAFGGMPL--MGS-GAGRAFNNFAAPRYGFKPT 404
P ASP + +A G A GMP MG+ G GRA P+YGF+P
Sbjct 327 PPAPVASP-LPSALGGTPMVAPPPAMAAGMPGMPFSPMGNHGLGRAV-----PQYGFRPN 380
Query 405 VIAQPPAGG 413
+ +PPA G
Sbjct 381 FVVRPPAAG 389
>gi|342861296|ref|ZP_08717944.1| PPE family protein [Mycobacterium colombiense CECT 3035]
gi|342131196|gb|EGT84477.1| PPE family protein [Mycobacterium colombiense CECT 3035]
Length=395
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 116/189 (62%), Positives = 139/189 (74%), Gaps = 0/189 (0%)
Query 1 MLDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQG 60
MLDFA LPPE+NSA MY+GPGSGPMLAAAAAW +AAE++ A++Y +++T L+ W G
Sbjct 1 MLDFAALPPEINSARMYSGPGSGPMLAAAAAWNTMAAEMRAAAASYGSVVTELSSEGWLG 60
Query 61 SSAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMA 120
S+ SM+AAA P +AWL TA QAE+ GSQA AAA+AYE+AF TVPP +AANRA L
Sbjct 61 PSSMSMLAAAAPYLAWLDGTATQAEEVGSQAFAAATAYESAFAMTVPPAVVAANRAQLAM 120
Query 121 LLATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGL 180
L+ATN GQNT AIAATEAQYAEMWAQDA AM GYA AS+AA Q +P N G+
Sbjct 121 LVATNIFGQNTPAIAATEAQYAEMWAQDAGAMNGYATASSAAAQFTPLATPQSNTNADGV 180
Query 181 ASQAASVGQ 189
A Q +V Q
Sbjct 181 AGQTNAVAQ 189
>gi|340627882|ref|YP_004746334.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340006072|emb|CCC45244.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=408
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 182/430 (43%), Positives = 231/430 (54%), Gaps = 40/430 (9%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+DF LPPE+NS MYAGPGSGPM+AAAAAW++LAAEL A Y I+ L W G
Sbjct 1 MDFGVLPPEINSGRMYAGPGSGPMMAAAAAWDSLAAELGLAAGGYRLAISELTGAYWVGP 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
+AASMVAA TP VAWL +TAGQAEQAG QA AAA+AYE AF TVPPP + ANRALL+AL
Sbjct 61 AAASMVAAVTPYVAWLSATAGQAEQAGMQARAAAAAYELAFAMTVPPPVVVANRALLVAL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINP-AGL 180
+ATNF GQNT AIAATEAQYAEMWAQDAAAMY YAG++A AT+L+PF PA T +P A
Sbjct 121 VATNFFGQNTPAIAATEAQYAEMWAQDAAAMYTYAGSAAIATELTPFTPAPVTTSPAALA 180
Query 181 ASQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGK-----ALGLT---- 231
AA+V V A A +P+ L LS T+ PW + L + LGLT
Sbjct 181 GQAAATVSSTVPPVATTAA---VPQLLQQLSS--TSLIPWYSALQQWLAENLLGLTPDNR 235
Query 232 -------GHTWSSDGSGLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQF 284
G ++ +G + + G G A S +D++G +
Sbjct 236 MTIVRLLGISYFDEGLLQFEASLAQQAIPGTPGGAGDSGSSVLDSWGPTI---------- 285
Query 285 KDYFGLAHDLPKWASEGAKAAGEAAKALPAAVPAIPSAGLSG-VAGAVGQAASVGGLKVP 343
F P A GA + + P A+ + G V+ A+G+ +S G L VP
Sbjct 286 ---FAGPRASPSVAGGGAVGGVQTPQ--PYWYWALDRESIGGSVSAALGKGSSAGSLSVP 340
Query 344 AVWTATTPAASPAVLAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKP 403
W A A+PA A G P+ + AG++ +YGF+
Sbjct 341 PDWAARARWANPAAWRLPGDDVTALRGTAENALLRGFPM--ASAGQSTGGGFVHKYGFRL 398
Query 404 TVIAQPPAGG 413
V+ +PP G
Sbjct 399 AVMQRPPFAG 408
>gi|289447421|ref|ZP_06437165.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289420379|gb|EFD17580.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length=403
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 198/423 (47%), Positives = 251/423 (60%), Gaps = 35/423 (8%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
LDFA LPPE+NSA MY+G GS PMLAAA+AW L+AEL+ +A +Y ++++ L W G
Sbjct 5 LDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 64
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
++ASM AAA P VAW+ TA +AEQAG+QA AAA+AYEAAF ATVPPP I ANRA LMAL
Sbjct 65 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEAAAAAYEAAFAATVPPPVIEANRAQLMAL 124
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATN LGQN AIAATEAQYAEMW+QDA AMYGYAGASAAATQL+PF QT N +GLA
Sbjct 125 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATQLTPFTEPVQTTNASGLA 184
Query 182 SQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGSG 241
+Q+A++ A +A AQ T LS + P L L + T T +S SG
Sbjct 185 AQSAAIAYATGASAGAQQTT--------LSQLIAAIPSVLQGLSSS---TAATSASGPSG 233
Query 242 LIVGGVLGDFVQGVTGSAELDASVAM----DTFGKWVSPARLMV--TQFKDYFGLAHDLP 295
L+ G+LG +GS+ LD A+ F ++ + L + + GL +
Sbjct 234 LL--GILG------SGSSWLDKLWALLDPNSNFWNTIASSGLFLPSNTIAPFLGLLGGVA 285
Query 296 KWASE----GAKAAGEAAKALPAAVPAIPSAGLSG-VAGAVGQAASVGGLKVPAVWTATT 350
+ G +G AL A P + GL G VA +G AA+VG L VP WTA
Sbjct 286 AADAAGDVLGEATSGGLGGALVA--PLGSAGGLGGTVAAGLGNAATVGTLSVPPSWTAAA 343
Query 351 PAASPAVLAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPP 410
P ASP + +A G A GMP G+ G+ F A P+YGF+P +A+PP
Sbjct 344 PLASP-LGSALGGTPMVAPPPAVAAGMPGMPF-GTMGGQGFGR-AVPQYGFRPNFVARPP 400
Query 411 AGG 413
A G
Sbjct 401 AAG 403
>gi|289761957|ref|ZP_06521335.1| predicted protein [Mycobacterium tuberculosis GM 1503]
gi|289709463|gb|EFD73479.1| predicted protein [Mycobacterium tuberculosis GM 1503]
Length=403
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 197/423 (47%), Positives = 250/423 (60%), Gaps = 35/423 (8%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
LDFA LPPE+NSA MY+G GS PMLAAA+AW L+AEL+ +A +Y ++++ L W G
Sbjct 5 LDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 64
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
++ASM AAA P VAW+ TA +AEQAG+QA AA+AYEAAF ATVPPP I ANRA LMAL
Sbjct 65 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEGAAAAYEAAFAATVPPPVIEANRAQLMAL 124
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATN LGQN AIAATEAQYAEMW+QDA AMYGYAGASAAATQL+PF QT N +GLA
Sbjct 125 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATQLTPFTEPVQTTNASGLA 184
Query 182 SQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGSG 241
+Q+A++ A +A AQ T LS + P L L + T T +S SG
Sbjct 185 AQSAAIAHATGASAGAQQTT--------LSQLIAAIPSVLQGLSSS---TAATSASGPSG 233
Query 242 LIVGGVLGDFVQGVTGSAELDASVAM----DTFGKWVSPARLMV--TQFKDYFGLAHDLP 295
L+ G+LG +GS+ LD A+ F ++ + L + + GL +
Sbjct 234 LL--GILG------SGSSWLDKLWALLDPNSNFWNTIASSGLFLPSNTIAPFLGLLGGVA 285
Query 296 KWASE----GAKAAGEAAKALPAAVPAIPSAGLSG-VAGAVGQAASVGGLKVPAVWTATT 350
+ G +G AL A P + GL G VA +G AA+VG L VP WTA
Sbjct 286 AADAAGDVLGEATSGGLGGALVA--PLGSAGGLGGTVAAGLGNAATVGTLSVPPSWTAAA 343
Query 351 PAASPAVLAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPP 410
P ASP + +A G A GMP G+ G+ F A P+YGF+P +A+PP
Sbjct 344 PLASP-LGSALGGTPMVAPPPAVAAGMPGMPF-GTMGGQGFGR-AVPQYGFRPNFVARPP 400
Query 411 AGG 413
A G
Sbjct 401 AAG 403
>gi|15841277|ref|NP_336314.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|148823020|ref|YP_001287774.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|224990193|ref|YP_002644880.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
49 more sequence titles
Length=403
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 198/423 (47%), Positives = 251/423 (60%), Gaps = 35/423 (8%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
LDFA LPPE+NSA MY+G GS PMLAAA+AW L+AEL+ +A +Y ++++ L W G
Sbjct 5 LDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 64
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
++ASM AAA P VAW+ TA +AEQAG+QA AAA+AYEAAF ATVPPP I ANRA LMAL
Sbjct 65 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEAAAAAYEAAFAATVPPPVIEANRAQLMAL 124
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATN LGQN AIAATEAQYAEMW+QDA AMYGYAGASAAATQL+PF QT N +GLA
Sbjct 125 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATQLTPFTEPVQTTNASGLA 184
Query 182 SQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGSG 241
+Q+A++ A +A AQ T LS + P L L + T T +S SG
Sbjct 185 AQSAAIAHATGASAGAQQTT--------LSQLIAAIPSVLQGLSSS---TAATSASGPSG 233
Query 242 LIVGGVLGDFVQGVTGSAELDASVAM----DTFGKWVSPARLMV--TQFKDYFGLAHDLP 295
L+ G+LG +GS+ LD A+ F ++ + L + + GL +
Sbjct 234 LL--GILG------SGSSWLDKLWALLDPNSNFWNTIASSGLFLPSNTIAPFLGLLGGVA 285
Query 296 KWASE----GAKAAGEAAKALPAAVPAIPSAGLSG-VAGAVGQAASVGGLKVPAVWTATT 350
+ G +G AL A P + GL G VA +G AA+VG L VP WTA
Sbjct 286 AADAAGDVLGEATSGGLGGALVA--PLGSAGGLGGTVAAGLGNAATVGTLSVPPSWTAAA 343
Query 351 PAASPAVLAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPP 410
P ASP + +A G A GMP G+ G+ F A P+YGF+P +A+PP
Sbjct 344 PLASP-LGSALGGTPMVAPPPAVAAGMPGMPF-GTMGGQGFGR-AVPQYGFRPNFVARPP 400
Query 411 AGG 413
A G
Sbjct 401 AAG 403
>gi|118618458|ref|YP_906790.1| PPE family protein [Mycobacterium ulcerans Agy99]
gi|118570568|gb|ABL05319.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=386
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/245 (54%), Positives = 161/245 (66%), Gaps = 6/245 (2%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
LDFA LPPE+NSA MY+GPGS PMLAAA+AW+ LAAEL+ T +YD+++ L W G
Sbjct 5 LDFATLPPEINSARMYSGPGSAPMLAAASAWKGLAAELRVTVLSYDSVLRALTGEEWYGP 64
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
++ASM AAA P VAW+ +TA QAE++ QA AAA+AYEAAF ATV P I ANRA LM L
Sbjct 65 ASASMAAAAAPYVAWMSTTAAQAEESAVQAAAAAAAYEAAFSATVAPTVITANRAQLMVL 124
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATN LGQNT IAA EAQY EMWAQDA AMYGYAG+SAAAT+LS F NPAGL
Sbjct 125 VATNVLGQNTPTIAAVEAQYCEMWAQDAMAMYGYAGSSAAATRLSEFLAPQHNTNPAGLL 184
Query 182 SQAASVGQAVSGAANA-QALTDIPKALFGLSGIFT-----NEPPWLTDLGKALGLTGHTW 235
+Q +++ Q +S N Q L + SG+ + N WL L G + W
Sbjct 185 AQQSTLAQLMSAVPNVLQGLASSNTSASAPSGLLSTLLSGNGQSWLATLWSEFGPNANIW 244
Query 236 SSDGS 240
++ S
Sbjct 245 NTIAS 249
>gi|326903411|gb|EGE50344.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
W-148]
Length=399
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 198/423 (47%), Positives = 251/423 (60%), Gaps = 35/423 (8%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
LDFA LPPE+NSA MY+G GS PMLAAA+AW L+AEL+ +A +Y ++++ L W G
Sbjct 1 LDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
++ASM AAA P VAW+ TA +AEQAG+QA AAA+AYEAAF ATVPPP I ANRA LMAL
Sbjct 61 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEAAAAAYEAAFAATVPPPVIEANRAQLMAL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATN LGQN AIAATEAQYAEMW+QDA AMYGYAGASAAATQL+PF QT N +GLA
Sbjct 121 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATQLTPFTEPVQTTNASGLA 180
Query 182 SQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGSG 241
+Q+A++ A +A AQ T LS + P L L + T T +S SG
Sbjct 181 AQSAAIAHATGASAGAQQTT--------LSQLIAAIPSVLQGLSSS---TAATSASGPSG 229
Query 242 LIVGGVLGDFVQGVTGSAELDASVAM----DTFGKWVSPARLMV--TQFKDYFGLAHDLP 295
L+ G+LG +GS+ LD A+ F ++ + L + + GL +
Sbjct 230 LL--GILG------SGSSWLDKLWALLDPNSNFWNTIASSGLFLPSNTIAPFLGLLGGVA 281
Query 296 KWASE----GAKAAGEAAKALPAAVPAIPSAGLSG-VAGAVGQAASVGGLKVPAVWTATT 350
+ G +G AL A P + GL G VA +G AA+VG L VP WTA
Sbjct 282 AADAAGDVLGEATSGGLGGALVA--PLGSAGGLGGTVAAGLGNAATVGTLSVPPSWTAAA 339
Query 351 PAASPAVLAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPP 410
P ASP + +A G A GMP G+ G+ F A P+YGF+P +A+PP
Sbjct 340 PLASP-LGSALGGTPMVAPPPAVAAGMPGMPF-GTMGGQGFGR-AVPQYGFRPNFVARPP 396
Query 411 AGG 413
A G
Sbjct 397 AAG 399
>gi|296164838|ref|ZP_06847396.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899804|gb|EFG79252.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=453
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 167/392 (43%), Positives = 232/392 (60%), Gaps = 42/392 (10%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+DFA LPPEVNSA MYAG G+G ++ AAAAWE LA EL + A++Y A+++ L GPW+G+
Sbjct 3 VDFAALPPEVNSARMYAGAGAGSLVTAAAAWEKLATELSSAAASYRAIVSELTGGPWEGA 62
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
S+ +M AA P V+W+ +TA QA+Q SQ +AA+AYEAAF ATVPPPEI NRALL +L
Sbjct 63 SSGTMAAAVAPYVSWMNTTAAQAQQTASQLGSAAAAYEAAFAATVPPPEIEVNRALLASL 122
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
++TN LGQNT AIAATEAQY++MWAQDAAAMYGYAGASAAAT+L+PF QT N +G
Sbjct 123 VSTNVLGQNTPAIAATEAQYSQMWAQDAAAMYGYAGASAAATRLTPFAAPQQTTNQSGTT 182
Query 182 SQAASVGQAVS--GAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDG 239
+Q ++V +A++ G+ L++IP L S G + ++ G
Sbjct 183 NQNSAVMKAMATGGSNTTSTLSNIPNMLKQSSA-------------------GSSGTTAG 223
Query 240 SGLIVGGVLGDFVQGVTGSAELDASVAMDTFGKWVSPARLMVTQFKDYFGLAHDLPKWAS 299
SG + + +F + G L + D G ++ A + + L L AS
Sbjct 224 SGGSLVDLFNNFSENTIGYQILSEGLNFDASGALLTLAPPVAAAWNP---LVDSLSAPAS 280
Query 300 EGAKAAGEAAKALPAAVPAIPSAGLSGVAGAVGQAASVGGLKVPAVWTATTPAASPAVLA 359
++ +G + + ++ PA P GV+ +G+AASVG L VP W+ ASP +
Sbjct 281 AASQVSGAGSALVNSSAPAAP-----GVSAGLGEAASVGKLSVPQSWS-----ASPGIRL 330
Query 360 ASNGLGAAAAAEGSTHA-------FGGMPLMG 384
A+ L +A +G A +GGMP MG
Sbjct 331 AATAL-PSAGLDGLPQAGAVAPGFYGGMPPMG 361
>gi|31792996|ref|NP_855489.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|121637709|ref|YP_977932.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|31618587|emb|CAD94539.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|121493356|emb|CAL71827.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
Length=399
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 197/423 (47%), Positives = 251/423 (60%), Gaps = 35/423 (8%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
+DFA LPPE+NSA MY+G GS PMLAAA+AW L+AEL+ +A +Y ++++ L W G
Sbjct 1 MDFATLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 60
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
++ASM AAA P VAW+ TA +AEQAG+QA AAA+AYEAAF ATVPPP I ANRA LMAL
Sbjct 61 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEAAAAAYEAAFAATVPPPVIEANRAQLMAL 120
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATN LGQN AIAATEAQYAEMW+QDA AMYGYAGASAAATQL+PF QT N +GLA
Sbjct 121 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATQLTPFTEPVQTTNASGLA 180
Query 182 SQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGSG 241
+Q+A++ A +A AQ T LS + P L L + T T +S SG
Sbjct 181 AQSAAIAHATGASAGAQQTT--------LSQLIAAIPSVLQGLSSS---TAATSASGPSG 229
Query 242 LIVGGVLGDFVQGVTGSAELDASVAM----DTFGKWVSPARLMV--TQFKDYFGLAHDLP 295
L+ G+LG +GS+ LD A+ F ++ + L + + GL +
Sbjct 230 LL--GILG------SGSSWLDKLWALLDPNSNFWNTIASSGLFLPSNTIAPFLGLLGGVA 281
Query 296 KWASE----GAKAAGEAAKALPAAVPAIPSAGLSG-VAGAVGQAASVGGLKVPAVWTATT 350
+ G +G AL A P + GL G VA +G AA+VG L VP WTA
Sbjct 282 AADAAGDVLGEATSGGLGGALVA--PLGSAGGLGGTVAAGLGNAATVGTLSVPPSWTAAA 339
Query 351 PAASPAVLAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPP 410
P ASP + +A G A GMP G+ G+ F A P+YGF+P +A+PP
Sbjct 340 PLASP-LGSALGGTPMVAPPPAVAAGMPGMPF-GTMGGQGFGR-AVPQYGFRPNFVARPP 396
Query 411 AGG 413
A G
Sbjct 397 AAG 399
>gi|341601736|emb|CCC64409.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=403
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 197/423 (47%), Positives = 250/423 (60%), Gaps = 35/423 (8%)
Query 2 LDFAQLPPEVNSALMYAGPGSGPMLAAAAAWEALAAELQTTASTYDALITGLADGPWQGS 61
LDF LPPE+NSA MY+G GS PMLAAA+AW L+AEL+ +A +Y ++++ L W G
Sbjct 5 LDFMTLPPEINSARMYSGAGSAPMLAAASAWHGLSAELRASALSYSSVLSTLTGEEWHGP 64
Query 62 SAASMVAAATPQVAWLRSTAGQAEQAGSQAVAAASAYEAAFFATVPPPEIAANRALLMAL 121
++ASM AAA P VAW+ TA +AEQAG+QA AAA+AYEAAF ATVPPP I ANRA LMAL
Sbjct 65 ASASMTAAAAPYVAWMSVTAVRAEQAGAQAEAAAAAYEAAFAATVPPPVIEANRAQLMAL 124
Query 122 LATNFLGQNTAAIAATEAQYAEMWAQDAAAMYGYAGASAAATQLSPFNPAAQTINPAGLA 181
+ATN LGQN AIAATEAQYAEMW+QDA AMYGYAGASAAATQL+PF QT N +GLA
Sbjct 125 IATNVLGQNAPAIAATEAQYAEMWSQDAMAMYGYAGASAAATQLTPFTEPVQTTNASGLA 184
Query 182 SQAASVGQAVSGAANAQALTDIPKALFGLSGIFTNEPPWLTDLGKALGLTGHTWSSDGSG 241
+Q+A++ A +A AQ T LS + P L L + T T +S SG
Sbjct 185 AQSAAIAHATGASAGAQQTT--------LSQLIAAIPSVLQGLSSS---TAATSASGPSG 233
Query 242 LIVGGVLGDFVQGVTGSAELDASVAM----DTFGKWVSPARLMV--TQFKDYFGLAHDLP 295
L+ G+LG +GS+ LD A+ F ++ + L + + GL +
Sbjct 234 LL--GILG------SGSSWLDKLWALLDPNSNFWNTIASSGLFLPSNTIAPFLGLLGGVA 285
Query 296 KWASE----GAKAAGEAAKALPAAVPAIPSAGLSG-VAGAVGQAASVGGLKVPAVWTATT 350
+ G +G AL A P + GL G VA +G AA+VG L VP WTA
Sbjct 286 AADAAGDVLGEATSGGLGGALVA--PLGSAGGLGGTVAAGLGNAATVGTLSVPPSWTAAA 343
Query 351 PAASPAVLAASNGLGAAAAAEGSTHAFGGMPLMGSGAGRAFNNFAAPRYGFKPTVIAQPP 410
P ASP + +A G A GMP G+ G+ F A P+YGF+P +A+PP
Sbjct 344 PLASP-LGSALGGTPMVAPPPAVAAGMPGMPF-GTMGGQGFGR-AVPQYGFRPNFVARPP 400
Query 411 AGG 413
A G
Sbjct 401 AAG 403
Lambda K H
0.313 0.126 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 828519148872
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40