BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3622c
Length=99
Score E
Sequences producing significant alignments: (Bits) Value
gi|15843234|ref|NP_338271.1| PE family protein [Mycobacterium tu... 186 1e-45
gi|167968541|ref|ZP_02550818.1| PE family protein [Mycobacterium... 179 9e-44
gi|183985090|ref|YP_001853381.1| PE family protein [Mycobacteriu... 130 5e-29
gi|183985086|ref|YP_001853377.1| PE family protein, PE32 [Mycoba... 125 2e-27
gi|240172418|ref|ZP_04751077.1| PE family protein [Mycobacterium... 125 2e-27
gi|118619370|ref|YP_907702.1| PE family protein [Mycobacterium u... 124 5e-27
gi|296166686|ref|ZP_06849111.1| PE family protein [Mycobacterium... 122 2e-26
gi|15843089|ref|NP_338126.1| PE family protein [Mycobacterium tu... 103 9e-21
gi|31794651|ref|NP_857144.1| PE family protein [Mycobacterium bo... 102 2e-20
gi|296164186|ref|ZP_06846786.1| PE family protein [Mycobacterium... 101 4e-20
gi|183982677|ref|YP_001850968.1| PE family protein, PE19_1 [Myco... 99.4 1e-19
gi|342861310|ref|ZP_08717958.1| hypothetical protein MCOL_20601 ... 99.4 2e-19
gi|118618471|ref|YP_906803.1| PE family protein [Mycobacterium u... 97.8 4e-19
gi|296164779|ref|ZP_06847341.1| PE family protein [Mycobacterium... 97.8 5e-19
gi|296170606|ref|ZP_06852185.1| PE family protein [Mycobacterium... 95.9 2e-18
gi|254820293|ref|ZP_05225294.1| hypothetical protein MintA_10211... 95.9 2e-18
gi|342861305|ref|ZP_08717953.1| hypothetical protein MCOL_20576 ... 95.5 2e-18
gi|254775399|ref|ZP_05216915.1| hypothetical protein MaviaA2_121... 95.1 3e-18
gi|240173303|ref|ZP_04751961.1| PE family protein [Mycobacterium... 94.4 5e-18
gi|333992874|ref|YP_004525488.1| PE-PGRS family protein [Mycobac... 93.6 9e-18
gi|240172414|ref|ZP_04751073.1| PE family protein, PE19_1 [Mycob... 91.7 3e-17
gi|183984754|ref|YP_001853045.1| PE-PGRS family protein [Mycobac... 91.3 4e-17
gi|15841256|ref|NP_336293.1| PE family protein [Mycobacterium tu... 90.5 7e-17
gi|41406539|ref|NP_959375.1| hypothetical protein MAP0441 [Mycob... 90.1 1e-16
gi|333989636|ref|YP_004522250.1| PE family protein PE8 [Mycobact... 89.7 1e-16
gi|240169038|ref|ZP_04747697.1| hypothetical protein MkanA1_0697... 89.7 1e-16
gi|333989643|ref|YP_004522257.1| PE-PGRS family protein [Mycobac... 89.0 2e-16
gi|296165761|ref|ZP_06848275.1| PE family protein [Mycobacterium... 89.0 2e-16
gi|342858923|ref|ZP_08715577.1| PE-PGRS family protein [Mycobact... 89.0 2e-16
gi|254364620|ref|ZP_04980666.1| PE family protein [Mycobacterium... 88.6 3e-16
gi|41407605|ref|NP_960441.1| hypothetical protein MAP1507 [Mycob... 88.6 3e-16
gi|254365420|ref|ZP_04981465.1| PE family protein [Mycobacterium... 88.6 3e-16
gi|183981962|ref|YP_001850253.1| PE family protein [Mycobacteriu... 88.2 3e-16
gi|240170799|ref|ZP_04749458.1| PE-PGRS family protein [Mycobact... 86.7 9e-16
gi|342861297|ref|ZP_08717945.1| hypothetical protein MCOL_20536 ... 86.3 1e-15
gi|183982680|ref|YP_001850971.1| PE family protein, PE19 [Mycoba... 86.3 1e-15
gi|118616216|ref|YP_904548.1| PE-PGRS family protein family prot... 84.7 4e-15
gi|118465345|ref|YP_882101.1| PE family protein [Mycobacterium a... 84.0 8e-15
gi|240173524|ref|ZP_04752182.1| PE family protein, PE19_1 [Mycob... 83.6 9e-15
gi|118618467|ref|YP_906799.1| PE family protein [Mycobacterium u... 83.6 1e-14
gi|254775390|ref|ZP_05216906.1| hypothetical protein MaviaA2_120... 83.2 1e-14
gi|333989638|ref|YP_004522252.1| PE-PGRS family protein [Mycobac... 82.0 3e-14
gi|296165819|ref|ZP_06848318.1| PE family protein [Mycobacterium... 81.6 3e-14
gi|333990542|ref|YP_004523156.1| PE-PGRS family protein [Mycobac... 81.3 5e-14
gi|333989806|ref|YP_004522420.1| PE family protein PE19 [Mycobac... 80.1 9e-14
gi|31792979|ref|NP_855472.1| PE family protein [Mycobacterium bo... 78.6 3e-13
gi|31793944|ref|NP_856437.1| PE family protein [Mycobacterium bo... 78.6 3e-13
gi|15841261|ref|NP_336298.1| PE family protein [Mycobacterium tu... 78.2 3e-13
gi|41407612|ref|NP_960448.1| hypothetical protein MAP1514 [Mycob... 78.2 4e-13
gi|212596260|gb|ACJ35564.1| PE3 [Mycobacterium intracellulare AT... 77.8 5e-13
>gi|15843234|ref|NP_338271.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|57117136|ref|YP_177999.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|148663485|ref|YP_001285008.1| PE family protein [Mycobacterium tuberculosis H37Ra]
67 more sequence titles
Length=99
Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/99 (100%), Positives = 99/99 (100%), Gaps = 0/99 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ
Sbjct 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSYAATEAANAATIA 99
LYQAISAEAMAVQEQLATTLGISAGSYAATEAANAATIA
Sbjct 61 LYQAISAEAMAVQEQLATTLGISAGSYAATEAANAATIA 99
>gi|167968541|ref|ZP_02550818.1| PE family protein [Mycobacterium tuberculosis H37Ra]
Length=96
Score = 179 bits (455), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%)
Query 4 MHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQLYQ 63
MHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQLYQ
Sbjct 1 MHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQLYQ 60
Query 64 AISAEAMAVQEQLATTLGISAGSYAATEAANAATIA 99
AISAEAMAVQEQLATTLGISAGSYAATEAANAATIA
Sbjct 61 AISAEAMAVQEQLATTLGISAGSYAATEAANAATIA 96
>gi|183985090|ref|YP_001853381.1| PE family protein [Mycobacterium marinum M]
gi|183178416|gb|ACC43526.1| PE family protein [Mycobacterium marinum M]
Length=99
Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/87 (81%), Positives = 76/87 (88%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MSIM A+ ++LAATA ELQSIN +AGN A A PTTGVVPAAADLVSLLTASQFAAHAQ
Sbjct 1 MSIMLAQTDVLAATAAELQSINVAVQAGNVAAAVPTTGVVPAAADLVSLLTASQFAAHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
LYQ I A+A+AVQEQLATTLGISAGSY
Sbjct 61 LYQQIGAQAVAVQEQLATTLGISAGSY 87
>gi|183985086|ref|YP_001853377.1| PE family protein, PE32 [Mycobacterium marinum M]
gi|183178412|gb|ACC43522.1| PE family protein, PE32 [Mycobacterium marinum M]
Length=99
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/94 (71%), Positives = 79/94 (85%), Gaps = 0/94 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + A+PE++A A ELQ+IN+ ARAG+ PTTGVVP AADLVS+LTA+QFAAHA+
Sbjct 1 MSHVTAQPEIVAGVALELQAINSAARAGDEVAVAPTTGVVPPAADLVSMLTAAQFAAHAR 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSYAATEAAN 94
+YQAISA+A AVQ+QL T LGISAGSYAATEAAN
Sbjct 61 VYQAISAQAAAVQDQLVTVLGISAGSYAATEAAN 94
>gi|240172418|ref|ZP_04751077.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=99
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/87 (83%), Positives = 79/87 (91%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MSIM A+P+MLAATA ELQSIN RAGNAA AGPTTGV+PAAADLVSLLTA+QFA HAQ
Sbjct 1 MSIMLAQPDMLAATATELQSINFAVRAGNAAAAGPTTGVLPAAADLVSLLTATQFATHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
+YQ ISA+A+AVQEQLATTLGISAGSY
Sbjct 61 MYQQISAQAVAVQEQLATTLGISAGSY 87
>gi|118619370|ref|YP_907702.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118571480|gb|ABL06231.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=99
Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/94 (70%), Positives = 79/94 (85%), Gaps = 0/94 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + A+PE++A A ELQ+IN+ ARAG+ PTTGVVP AADLVS+LTA+QFAAHA+
Sbjct 1 MSHVTAQPEIVAGVALELQAINSAARAGDEVAVAPTTGVVPPAADLVSMLTAAQFAAHAR 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSYAATEAAN 94
+YQAISA+A AVQ++L T LGISAGSYAATEAAN
Sbjct 61 VYQAISAQAAAVQDELVTVLGISAGSYAATEAAN 94
>gi|296166686|ref|ZP_06849111.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897951|gb|EFG77532.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/98 (72%), Positives = 83/98 (85%), Gaps = 0/98 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MSI+ A+P+ML+A AGELQSIN+ +AGNAA AGPTT V PAA+D VS+LTA+QF+AHAQ
Sbjct 1 MSIVIAQPDMLSAAAGELQSINSALQAGNAAAAGPTTAVAPAASDAVSILTATQFSAHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSYAATEAANAATI 98
LYQAISA+A QEQLAT LGI AGSYAATEAAN+ +
Sbjct 61 LYQAISAQAARAQEQLATVLGICAGSYAATEAANSVLV 98
>gi|15843089|ref|NP_338126.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|57117110|ref|YP_177975.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|121639395|ref|YP_979619.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
75 more sequence titles
Length=98
Score = 103 bits (257), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/90 (65%), Positives = 65/90 (73%), Gaps = 0/90 (0%)
Query 6 AEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQLYQAI 65
A+PEMLAA AGEL+S+ A +A NAA A PTTGVVP AAD VSLL A+QF HA YQ
Sbjct 5 AQPEMLAAAAGELRSLGATLKASNAAAAVPTTGVVPPAADEVSLLLATQFRTHAATYQTA 64
Query 66 SAEAMAVQEQLATTLGISAGSYAATEAANA 95
SA+A + EQ TTL SA SYA TEAANA
Sbjct 65 SAKAAVIHEQFVTTLATSASSYADTEAANA 94
>gi|31794651|ref|NP_857144.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|31620248|emb|CAD95691.1| PE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=98
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/90 (64%), Positives = 64/90 (72%), Gaps = 0/90 (0%)
Query 6 AEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQLYQAI 65
A+PEMLAA AGEL+S+ A + NAA A PTTGVVP AAD VSLL A+QF HA YQ
Sbjct 5 AQPEMLAAAAGELRSLGATLKVSNAAAAVPTTGVVPPAADEVSLLLATQFRTHAATYQTA 64
Query 66 SAEAMAVQEQLATTLGISAGSYAATEAANA 95
SA+A + EQ TTL SA SYA TEAANA
Sbjct 65 SAKAAVIHEQFVTTLATSASSYADTEAANA 94
>gi|296164186|ref|ZP_06846786.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295900461|gb|EFG79867.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/85 (65%), Positives = 63/85 (75%), Gaps = 0/85 (0%)
Query 7 EPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQLYQAIS 66
+P+ML A AG LQ I + A NA A PTTGVVPAAAD VS LTA QFAAHAQ+YQA+S
Sbjct 7 DPQMLTAAAGTLQGIGSAMSAENAPAAAPTTGVVPAAADEVSALTALQFAAHAQMYQAVS 66
Query 67 AEAMAVQEQLATTLGISAGSYAATE 91
A+A A+ E A TLG+SA SYA TE
Sbjct 67 AQAAAIHEMFANTLGVSADSYAVTE 91
>gi|183982677|ref|YP_001850968.1| PE family protein, PE19_1 [Mycobacterium marinum M]
gi|183176003|gb|ACC41113.1| PE family protein, PE19_1 [Mycobacterium marinum M]
Length=99
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/87 (63%), Positives = 64/87 (74%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + +PE LAA A LQ I + + NAA A PTTGVVPAAAD VS LTA+QFAAHAQ
Sbjct 1 MSYVTTQPEALAAAASTLQGIGSTLSSQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
+YQA+SA+A A+ E TLGIS+GSY
Sbjct 61 MYQAVSAQASAIHEMFVNTLGISSGSY 87
>gi|342861310|ref|ZP_08717958.1| hypothetical protein MCOL_20601 [Mycobacterium colombiense CECT
3035]
gi|342131210|gb|EGT84491.1| hypothetical protein MCOL_20601 [Mycobacterium colombiense CECT
3035]
Length=99
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/91 (62%), Positives = 66/91 (73%), Gaps = 0/91 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + +PE LAA AG LQ+I + A NAA A PTTGVVPAAAD VS LTA+QFAAH Q
Sbjct 1 MSFVTTQPEALAAAAGNLQTIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHGQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSYAATE 91
+YQA+SA+A A+ E TL S+GSYA TE
Sbjct 61 MYQAVSAQAAAIHEMFVNTLSTSSGSYAVTE 91
>gi|118618471|ref|YP_906803.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118570581|gb|ABL05332.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=99
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/87 (61%), Positives = 63/87 (73%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + +PE LAA A LQ I + + NAA A PTTGVVPAAAD VS LTA+QF AHAQ
Sbjct 1 MSYVTTQPEALAAAASTLQGIGSTLSSQNAAAAAPTTGVVPAAADEVSALTAAQFVAHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
+YQA+SA+A A+ E TLGIS+GSY
Sbjct 61 MYQAVSAQASAIHEMFVNTLGISSGSY 87
>gi|296164779|ref|ZP_06847341.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899880|gb|EFG79324.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99
Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/91 (63%), Positives = 68/91 (75%), Gaps = 0/91 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + +PE L+A AG LQSI + A NAA A PTTGVVPAAAD VS LTA+QFAAHAQ
Sbjct 1 MSFVTTQPEALSAAAGSLQSIGSALNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSYAATE 91
+YQA+SA+A A+ E TL +S+GSYA TE
Sbjct 61 MYQAVSAQAAAIHEMFVNTLSMSSGSYAVTE 91
>gi|296170606|ref|ZP_06852185.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894738|gb|EFG74468.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/87 (63%), Positives = 65/87 (75%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + +PE LAA AG LQ+I + A NAA A PTTGVVPAAAD VS LTA+QFAAHAQ
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
+YQA+SA+A A+ E TL +S+GSY
Sbjct 61 MYQAVSAQAAAIHEAFVNTLSMSSGSY 87
>gi|254820293|ref|ZP_05225294.1| hypothetical protein MintA_10211 [Mycobacterium intracellulare
ATCC 13950]
gi|212596298|gb|ACJ35567.1| PE7 [Mycobacterium intracellulare ATCC 13950]
Length=99
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/87 (63%), Positives = 64/87 (74%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + +PE LAA AG LQ+I + A NAA A PTTGVVPAAAD VS LTA+QFAAHAQ
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
+YQA+SA+A A+ E TL S+GSY
Sbjct 61 MYQAVSAQAQAIHEAFVNTLSTSSGSY 87
>gi|342861305|ref|ZP_08717953.1| hypothetical protein MCOL_20576 [Mycobacterium colombiense CECT
3035]
gi|342131205|gb|EGT84486.1| hypothetical protein MCOL_20576 [Mycobacterium colombiense CECT
3035]
Length=99
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/87 (63%), Positives = 64/87 (74%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + +PE LAA AG LQ+I + A NAA A PTTGVVPAAAD VS LTA+QFAAHAQ
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
+YQA+SA+A A+ E TL S+GSY
Sbjct 61 MYQAVSAQAAAIHEMFVNTLSTSSGSY 87
>gi|254775399|ref|ZP_05216915.1| hypothetical protein MaviaA2_12121 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|212595819|gb|ACJ35525.1| PE7 [Mycobacterium avium subsp. avium]
gi|336457654|gb|EGO36658.1| PE family protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=99
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/87 (63%), Positives = 64/87 (74%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + +PE LAA AG LQ+I + A NAA A PTTGVVPAAAD VS LTA+QFAAHAQ
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
+YQA+SA+A A+ E TL S+GSY
Sbjct 61 MYQAVSAQAAAIHEAFVNTLSTSSGSY 87
>gi|240173303|ref|ZP_04751961.1| PE family protein [Mycobacterium kansasii ATCC 12478]
Length=146
Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/87 (59%), Positives = 62/87 (72%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + +P+ LAA AG+LQ+I A A N A A PTTGV+PAAAD VS+L AS F A+
Sbjct 1 MSFLTTQPDELAAAAGKLQTIGATMEAENVAAAVPTTGVIPAAADEVSMLQASMFTAYGS 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
LYQ ISAEA A+ E L TLG+SAG+Y
Sbjct 61 LYQQISAEAAAMYEMLVNTLGVSAGTY 87
>gi|333992874|ref|YP_004525488.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
gi|333488842|gb|AEF38234.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
Length=95
Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/95 (63%), Positives = 65/95 (69%), Gaps = 0/95 (0%)
Query 4 MHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQLYQ 63
M A PE L ATA EL SI A N A AGPTTGVVPAAAD VS LTA+QFA HAQ+YQ
Sbjct 1 MSALPEELTATAAELSSIGNAVAAQNTAAAGPTTGVVPAAADEVSALTAAQFARHAQMYQ 60
Query 64 AISAEAMAVQEQLATTLGISAGSYAATEAANAATI 98
AIS A V E+ L +A SYAAT+AANA +I
Sbjct 61 AISKRAAVVHERFVIMLQRNAQSYAATDAANAISI 95
>gi|240172414|ref|ZP_04751073.1| PE family protein, PE19_1 [Mycobacterium kansasii ATCC 12478]
Length=281
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/95 (55%), Positives = 63/95 (67%), Gaps = 0/95 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + PEML A G L++I + N A P GV+PAAAD VS++TA+ F A+ Q
Sbjct 1 MSFVITLPEMLMAAVGRLEAIGSAVSTANVTAALPIAGVIPAAADEVSMVTAASFTAYGQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSYAATEAANA 95
LYQAISAEA + EQ LG+SA SYAATEAANA
Sbjct 61 LYQAISAEAHLIHEQFVKALGLSANSYAATEAANA 95
>gi|183984754|ref|YP_001853045.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178080|gb|ACC43190.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=99
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/95 (57%), Positives = 63/95 (67%), Gaps = 0/95 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
M+ + + PE L A A L S+ A AGNAA P TGVVPAAAD VS LTA+ FAAH
Sbjct 1 MAFVTSAPEALTAAALNLHSVGAGMSAGNAAAMAPITGVVPAAADEVSALTAAHFAAHGA 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSYAATEAANA 95
+YQ +SA+A A+ E TTL S GSYA TEAANA
Sbjct 61 MYQTLSAQAQAIHEMFVTTLQASGGSYAETEAANA 95
>gi|15841256|ref|NP_336293.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|31792976|ref|NP_855469.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116910|ref|YP_177834.1| PE family protein [Mycobacterium tuberculosis H37Rv]
60 more sequence titles
Length=99
Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/87 (63%), Positives = 64/87 (74%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + +PE LAA AG LQ I + A NAA A PTTGVVPAAAD VS LTA+QFAAHAQ
Sbjct 1 MSFVTTQPEALAAAAGSLQGIGSALNAQNAAAATPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
+YQA+SA+A A+ E TL +S+GSY
Sbjct 61 IYQAVSAQAAAIHEMFVNTLQMSSGSY 87
>gi|41406539|ref|NP_959375.1| hypothetical protein MAP0441 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394888|gb|AAS02758.1| PE_3 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336460935|gb|EGO39818.1| PE family protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=99
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/87 (53%), Positives = 60/87 (69%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + PE+L A A EL INA N+AV PTT V PAA D+VSL+TA++F+ H
Sbjct 1 MSFLMVRPEILDAAARELHGINAAVLQSNSAVVTPTTAVAPAAGDVVSLVTAARFSRHGL 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
+Q +SA+A +++Q ATTLGISAGSY
Sbjct 61 AFQEVSAQAAQLRDQFATTLGISAGSY 87
>gi|333989636|ref|YP_004522250.1| PE family protein PE8 [Mycobacterium sp. JDM601]
gi|333485604|gb|AEF34996.1| PE family protein PE8 [Mycobacterium sp. JDM601]
Length=273
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/91 (55%), Positives = 61/91 (68%), Gaps = 0/91 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + PE +AATA LQ+I + A N A A PTTG+ PA AD VS+L A+QFAA+ Q
Sbjct 1 MSFVTTHPEAMAATASNLQAIGSAMTAQNTAAAAPTTGIAPAGADEVSVLQATQFAAYGQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSYAATE 91
LYQ ISA+A A+QE TL SA SY +TE
Sbjct 61 LYQQISAQAAAIQEMFVNTLRTSADSYGSTE 91
>gi|240169038|ref|ZP_04747697.1| hypothetical protein MkanA1_06979 [Mycobacterium kansasii ATCC
12478]
Length=99
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/89 (59%), Positives = 62/89 (70%), Gaps = 0/89 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + A+P++LAA A L S+ A AGN+A A PTTGV+P AAD VS L A QFAAHA
Sbjct 1 MSFLTAQPDVLAAAAANLGSVGAALSAGNSAAAAPTTGVLPPAADEVSALVAVQFAAHAA 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSYAA 89
YQA+SA A + +QL TL SAGSYAA
Sbjct 61 TYQAVSARAAGIHDQLVATLAASAGSYAA 89
>gi|333989643|ref|YP_004522257.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
gi|333485611|gb|AEF35003.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
Length=99
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/87 (58%), Positives = 61/87 (71%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + +PE LAA AG LQ+I + A NAA + PTTGVVPAAAD VS LTA+QFA HA
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGSALNAQNAAASAPTTGVVPAAADEVSALTAAQFATHAT 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
LYQ+++A+A A+ E TL SA SY
Sbjct 61 LYQSVAAQAAAIHEMFVATLNGSAESY 87
>gi|296165761|ref|ZP_06848275.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898886|gb|EFG78378.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/94 (60%), Positives = 68/94 (73%), Gaps = 0/94 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + A+PEMLAATA +L+ I + NAA + TTGV+PA AD VS LTA QFAAHAQ
Sbjct 1 MSFVTAQPEMLAATANDLRGIGSALAVQNAAASRSTTGVIPAGADEVSALTAVQFAAHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSYAATEAAN 94
+YQA+SA+A A + TL +SAGSYAATEA N
Sbjct 61 MYQAVSAQAAAAYDLFVRTLAVSAGSYAATEAIN 94
>gi|342858923|ref|ZP_08715577.1| PE-PGRS family protein [Mycobacterium colombiense CECT 3035]
gi|342133164|gb|EGT86367.1| PE-PGRS family protein [Mycobacterium colombiense CECT 3035]
Length=100
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/96 (63%), Positives = 70/96 (73%), Gaps = 0/96 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + P+ L+A A LQSI A GNAA A PTTGVVPAA D VS+LTA+QFAAHA
Sbjct 1 MSFVTVHPDKLSAAASNLQSITAALHVGNAAAAIPTTGVVPAAVDEVSVLTAAQFAAHAA 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSYAATEAANAA 96
+QA++A A+AV E LA TL SAGSY ATEAAN+A
Sbjct 61 RFQALAARALAVHELLAATLAQSAGSYTATEAANSA 96
>gi|254364620|ref|ZP_04980666.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134150134|gb|EBA42179.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
Length=99
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/87 (61%), Positives = 63/87 (73%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
M + +PE LAA AG LQ I + A NAA A PTTGVVPAAAD VS LTA+QFAAHAQ
Sbjct 1 MPFVTTQPEALAAAAGSLQGIGSALNAQNAAAATPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
+YQA+SA+A A+ E TL +S+GSY
Sbjct 61 IYQAVSAQAAAIHEMFVNTLQMSSGSY 87
>gi|41407605|ref|NP_960441.1| hypothetical protein MAP1507 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395958|gb|AAS03824.1| PE_4 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|225698451|gb|ACO07343.1| PE protein [Mycobacterium avium subsp. paratuberculosis]
Length=99
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/87 (60%), Positives = 62/87 (72%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + +PE LAA AG LQ+I A NAA A PTTGVVPAAAD VS LTA+QFAA+AQ
Sbjct 1 MSFVTTQPEALAAAAGNLQAIGWTLSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAYAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
+YQA+SA+A A+ E TL S+ SY
Sbjct 61 MYQAVSAQAAAIHEAFVNTLSTSSVSY 87
>gi|254365420|ref|ZP_04981465.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134150933|gb|EBA42978.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
Length=275
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/97 (56%), Positives = 70/97 (73%), Gaps = 1/97 (1%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTT-GVVPAAADLVSLLTASQFAAHA 59
MS + +PE LAA AG+L++I + A NAA A PTT GV+PAAAD +S+L A F A+
Sbjct 1 MSFLTTQPEELAAAAGKLETIGSAMVAQNAAAAAPTTTGVIPAAADEISVLQAPLFTAYG 60
Query 60 QLYQAISAEAMAVQEQLATTLGISAGSYAATEAANAA 96
LYQ +SAEA AV + TLG+SAG+YAATEAAN++
Sbjct 61 TLYQQVSAEAAAVYDLFVKTLGVSAGTYAATEAANSS 97
>gi|183981962|ref|YP_001850253.1| PE family protein [Mycobacterium marinum M]
gi|183175288|gb|ACC40398.1| PE family protein [Mycobacterium marinum M]
Length=267
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/97 (55%), Positives = 67/97 (70%), Gaps = 1/97 (1%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGN-AAVAGPTTGVVPAAADLVSLLTASQFAAHA 59
MS + +PE LAA AG+L++I A A N AAVA TTGV+PAAAD VS L AS F A+
Sbjct 1 MSFLTTQPEELAAAAGKLETIGATMDAENVAAVAPTTTGVIPAAADEVSALQASLFTAYG 60
Query 60 QLYQAISAEAMAVQEQLATTLGISAGSYAATEAANAA 96
LYQ +SAEA + + TLG+SAG+YAA E AN++
Sbjct 61 TLYQQVSAEAATLYDMFVRTLGVSAGTYAAAETANSS 97
>gi|240170799|ref|ZP_04749458.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=99
Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/90 (62%), Positives = 63/90 (70%), Gaps = 0/90 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + +EPE L + AG LQSI + A NAA P TGVVPAAAD VS LTA+ FAAH
Sbjct 1 MSFVTSEPEALISAAGNLQSIGSAMNASNAAAIAPITGVVPAAADEVSALTAAHFAAHGT 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSYAAT 90
LYQA+SA+A A+ E TTLG S GSYAAT
Sbjct 61 LYQAVSAQAAAIHELFVTTLGASGGSYAAT 90
>gi|342861297|ref|ZP_08717945.1| hypothetical protein MCOL_20536 [Mycobacterium colombiense CECT
3035]
gi|342131197|gb|EGT84478.1| hypothetical protein MCOL_20536 [Mycobacterium colombiense CECT
3035]
Length=99
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/89 (56%), Positives = 60/89 (68%), Gaps = 0/89 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
M+ + A+PE L A L I + A N+A A P TGV PAAAD VSLLTA+QFA H Q
Sbjct 1 MNFVTAQPESLDIAASRLHEIGSALTAQNSATAAPMTGVAPAAADEVSLLTAAQFARHGQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSYAA 89
+QA+SA+A A+ E TTL +SAGSYAA
Sbjct 61 TFQALSAQAAAIHENFVTTLQVSAGSYAA 89
>gi|183982680|ref|YP_001850971.1| PE family protein, PE19 [Mycobacterium marinum M]
gi|183176006|gb|ACC41116.1| PE family protein, PE19 [Mycobacterium marinum M]
Length=99
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/87 (61%), Positives = 61/87 (71%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + +PE LAA A LQ I A NAA A PTTGVVPAAAD VS LTA+QFAAHAQ
Sbjct 1 MSFVTTQPEALAAAAANLQGIGTTMSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
+YQA+SA+A A+ E TL S+GSY
Sbjct 61 MYQAVSAQAAAIHEMFVNTLATSSGSY 87
>gi|118616216|ref|YP_904548.1| PE-PGRS family protein family protein [Mycobacterium ulcerans
Agy99]
gi|118568326|gb|ABL03077.1| PE-PGRS family protein family protein [Mycobacterium ulcerans
Agy99]
Length=99
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/88 (58%), Positives = 57/88 (65%), Gaps = 0/88 (0%)
Query 8 PEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQLYQAISA 67
PE L A A L S+ A AGNAA P TGVVPAAAD VS LTA+ FAAH + Q +SA
Sbjct 8 PEALTAAALNLHSVGAGTSAGNAAAMAPITGVVPAAADEVSALTAAHFAAHGAMCQTLSA 67
Query 68 EAMAVQEQLATTLGISAGSYAATEAANA 95
+A A+ E TTL GSYA TEAANA
Sbjct 68 QAQAIYEMFVTTLQACGGSYAETEAANA 95
>gi|118465345|ref|YP_882101.1| PE family protein [Mycobacterium avium 104]
gi|118166632|gb|ABK67529.1| PE family protein [Mycobacterium avium 104]
gi|212595805|gb|ACJ35524.1| PE6 [Mycobacterium avium subsp. avium]
Length=99
Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/91 (55%), Positives = 58/91 (64%), Gaps = 0/91 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
M + A+PE + A A LQ I A A + P TGVVPAAAD VSLL A++FA H Q
Sbjct 1 MMYVTAQPEAMNAAADRLQQIGTALAAQTGANSAPMTGVVPAAADPVSLLAAARFAQHGQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSYAATE 91
+QA+SAEA AV E TTL SAGSYA TE
Sbjct 61 AFQAVSAEAAAVHEMFVTTLQTSAGSYAGTE 91
>gi|240173524|ref|ZP_04752182.1| PE family protein, PE19_1 [Mycobacterium kansasii ATCC 12478]
Length=99
Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/87 (61%), Positives = 61/87 (71%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + +PE LAA A LQ I A NAA A PTTGVVPAAAD VS LTA+QFAAHAQ
Sbjct 1 MSFVTTQPEALAAAASSLQGIGTTMSAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
+YQA+SA+A A+ E TL S+GSY
Sbjct 61 MYQAVSAQAAAIHEMFVNTLATSSGSY 87
>gi|118618467|ref|YP_906799.1| PE family protein [Mycobacterium ulcerans Agy99]
gi|118570577|gb|ABL05328.1| PE family protein [Mycobacterium ulcerans Agy99]
Length=99
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/87 (59%), Positives = 59/87 (68%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + +PE LAA A LQ I A NAA A PTTGVVPAAAD VS LTA+QFA HAQ
Sbjct 1 MSFVTTQPEALAAAAANLQGIGTTMSAQNAAAAAPTTGVVPAAADEVSALTAAQFAGHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
+YQA+SA+A + E TL S+GSY
Sbjct 61 MYQAVSAQAAVIHEMFVNTLATSSGSY 87
>gi|254775390|ref|ZP_05216906.1| hypothetical protein MaviaA2_12076 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=98
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/86 (57%), Positives = 56/86 (66%), Gaps = 0/86 (0%)
Query 6 AEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQLYQAI 65
A+PE + A A LQ I A A + P TGVVPAAAD VSLL A++FA H Q +QA+
Sbjct 5 AQPEAMNAAADRLQQIGTALAAQTGANSAPMTGVVPAAADPVSLLAAARFAQHGQAFQAV 64
Query 66 SAEAMAVQEQLATTLGISAGSYAATE 91
SAEA AV E TTL SAGSYA TE
Sbjct 65 SAEAAAVHEMFVTTLQTSAGSYAGTE 90
>gi|333989638|ref|YP_004522252.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
gi|333485606|gb|AEF34998.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
Length=99
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/87 (61%), Positives = 60/87 (69%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + A+PE L A AGEL I A A NAA A TTGVVPAAAD VS LTA+QF AHA
Sbjct 1 MSFVSAQPEELTAAAGELTGIGAAMAAQNAAAAAATTGVVPAAADPVSALTAAQFVAHAD 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
LYQ++SA+A A + TTL SAGSY
Sbjct 61 LYQSVSAQANATHQMFVTTLMTSAGSY 87
>gi|296165819|ref|ZP_06848318.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898827|gb|EFG78334.1| PE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=99
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 68/95 (72%), Gaps = 0/95 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
M ++ +P + A A + Q I + AGN A A P TGVVPAAAD VS LTA QFAAHAQ
Sbjct 1 MMLVTTQPAAMTAAADDAQGIGSAMSAGNVAAAAPRTGVVPAAADEVSGLTALQFAAHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSYAATEAANA 95
+YQA+SA+A AV E A+TLG+SA SYA TEAANA
Sbjct 61 IYQAVSAQAAAVHEMFASTLGVSADSYALTEAANA 95
>gi|333990542|ref|YP_004523156.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
gi|333486510|gb|AEF35902.1| PE-PGRS family protein [Mycobacterium sp. JDM601]
Length=99
Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/87 (58%), Positives = 61/87 (71%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS ++ +PE L A AG L +I + A NAA A PTTGVVPAAAD VS LTA+QFAAHA
Sbjct 1 MSFVNTQPEALTAAAGNLAAIGSALSAQNAAAATPTTGVVPAAADEVSALTAAQFAAHAS 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
+YQ+ISA+A A+ + TL SA SY
Sbjct 61 MYQSISAQAEAIHQAFVATLNSSANSY 87
>gi|333989806|ref|YP_004522420.1| PE family protein PE19 [Mycobacterium sp. JDM601]
gi|333485774|gb|AEF35166.1| PE family protein PE19 [Mycobacterium sp. JDM601]
Length=99
Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/91 (55%), Positives = 64/91 (71%), Gaps = 0/91 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS ++ +PE LA+ A EL+ I +V A N A AGPTT + PAAAD VS LTA+ F+AHAQ
Sbjct 1 MSFVNTQPEALASAASELRGIGSVVAAQNMAAAGPTTVLPPAAADEVSALTAALFSAHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSYAATE 91
YQ +SA+A A+ E TL +S+ SYAATE
Sbjct 61 AYQEVSAQAAAIHEAFVRTLALSSESYAATE 91
>gi|31792979|ref|NP_855472.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|57116913|ref|YP_177837.1| PE family protein [Mycobacterium tuberculosis H37Rv]
gi|121637692|ref|YP_977915.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
59 more sequence titles
Length=99
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/87 (60%), Positives = 60/87 (69%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + +PE LAA A LQ I A NAA A PTTGVVPAAAD VS LTA+QFAAHAQ
Sbjct 1 MSFVTTQPEALAAAAANLQGIGTTMNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
+YQ +SA+A A+ E TL S+GSY
Sbjct 61 MYQTVSAQAAAIHEMFVNTLVASSGSY 87
>gi|31793944|ref|NP_856437.1| PE family protein [Mycobacterium bovis AF2122/97]
gi|121638648|ref|YP_978872.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224991140|ref|YP_002645829.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
14 more sequence titles
Length=275
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/90 (56%), Positives = 64/90 (72%), Gaps = 1/90 (1%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTT-GVVPAAADLVSLLTASQFAAHA 59
MS + +PE LAA AG+L++I + A NAA A PTT GV+PAAAD +S+L AS F A+
Sbjct 1 MSFLTTQPEELAAAAGKLETIGSAMVAQNAAAAAPTTTGVIPAAADEISVLQASLFTAYG 60
Query 60 QLYQAISAEAMAVQEQLATTLGISAGSYAA 89
LYQ +SAEA AV + TLG+SAG+YAA
Sbjct 61 TLYQQVSAEAAAVYDLFVKTLGVSAGTYAA 90
>gi|15841261|ref|NP_336298.1| PE family protein [Mycobacterium tuberculosis CDC1551]
gi|148823006|ref|YP_001287760.1| PE family protein [Mycobacterium tuberculosis F11]
gi|253799168|ref|YP_003032169.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
17 more sequence titles
Length=105
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/87 (60%), Positives = 60/87 (69%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + +PE LAA A LQ I A NAA A PTTGVVPAAAD VS LTA+QFAAHAQ
Sbjct 7 MSFVTTQPEALAAAAANLQGIGTTMNAQNAAAAAPTTGVVPAAADEVSALTAAQFAAHAQ 66
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
+YQ +SA+A A+ E TL S+GSY
Sbjct 67 MYQTVSAQAAAIHEMFVNTLVASSGSY 93
>gi|41407612|ref|NP_960448.1| hypothetical protein MAP1514 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395965|gb|AAS03831.1| PE_5 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336457563|gb|EGO36568.1| PE family protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=99
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/89 (54%), Positives = 57/89 (65%), Gaps = 0/89 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
M + A+PE + A A LQ I A A + P TGVVPAAAD VSLL A++FA H Q
Sbjct 1 MMYVTAQPEAMNAAADRLQQIGTALAAQTGANSAPMTGVVPAAADPVSLLAAARFAQHGQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSYAA 89
+QA+SAEA A+ E TTL SAGSYAA
Sbjct 61 AFQAVSAEAAAIHEMFVTTLQTSAGSYAA 89
>gi|212596260|gb|ACJ35564.1| PE3 [Mycobacterium intracellulare ATCC 13950]
Length=99
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/87 (61%), Positives = 66/87 (76%), Gaps = 0/87 (0%)
Query 1 MSIMHAEPEMLAATAGELQSINAVARAGNAAVAGPTTGVVPAAADLVSLLTASQFAAHAQ 60
MS + A PE+L A + EL INA + N+A+A TT V PAAAD VS+LTA++F+ H Q
Sbjct 1 MSFLMARPEILDAASRELHGINAAVQENNSALAVATTAVAPAAADAVSILTAARFSQHGQ 60
Query 61 LYQAISAEAMAVQEQLATTLGISAGSY 87
L+Q ISA+A AV+EQLATTLGISAGSY
Sbjct 61 LFQEISAQAAAVREQLATTLGISAGSY 87
Lambda K H
0.310 0.117 0.297
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129711308684
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40