BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3623
Length=240
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610759|ref|NP_218140.1| lipoprotein LpqG [Mycobacterium tub... 478 4e-133
gi|297636295|ref|ZP_06954075.1| lipoprotein lpqG [Mycobacterium ... 478 4e-133
gi|167968542|ref|ZP_02550819.1| lipoprotein lpqG [Mycobacterium ... 477 5e-133
gi|289445216|ref|ZP_06434960.1| lipoprotein lpqG [Mycobacterium ... 476 1e-132
gi|340628588|ref|YP_004747040.1| putative lipoprotein LPQG [Myco... 445 3e-123
gi|339300037|gb|AEJ52147.1| lipoprotein lpqG [Mycobacterium tube... 376 1e-102
gi|31794793|ref|NP_857286.1| lipoprotein LpqG [Mycobacterium bov... 345 4e-93
gi|240172422|ref|ZP_04751081.1| lipoprotein LpqG [Mycobacterium ... 342 4e-92
gi|342862032|ref|ZP_08718676.1| LpqG [Mycobacterium colombiense ... 323 1e-86
gi|296166687|ref|ZP_06849112.1| LpqG protein [Mycobacterium para... 322 4e-86
gi|254820406|ref|ZP_05225407.1| LpqG [Mycobacterium intracellula... 321 6e-86
gi|183985091|ref|YP_001853382.1| lipoprotein LpqG [Mycobacterium... 318 6e-85
gi|118619372|ref|YP_907704.1| lipoprotein LpqG [Mycobacterium ul... 315 4e-84
gi|41406538|ref|NP_959374.1| LpqG [Mycobacterium avium subsp. pa... 307 1e-81
gi|336460936|gb|EGO39819.1| hypothetical protein MAPs_36020 [Myc... 306 2e-81
gi|254773194|ref|ZP_05214710.1| LpqG [Mycobacterium avium subsp.... 306 2e-81
gi|118467102|ref|YP_879813.1| LpqG protein [Mycobacterium avium ... 306 2e-81
gi|333992544|ref|YP_004525158.1| hypothetical protein JDM601_390... 281 5e-74
gi|118468042|ref|YP_890330.1| LpqG protein [Mycobacterium smegma... 269 3e-70
gi|108801737|ref|YP_641934.1| hypothetical protein Mmcs_4774 [My... 263 2e-68
gi|120406323|ref|YP_956152.1| hypothetical protein Mvan_5375 [My... 251 8e-65
gi|145222006|ref|YP_001132684.1| hypothetical protein Mflv_1414 ... 242 3e-62
gi|315446254|ref|YP_004079133.1| hypothetical protein Mspyr1_475... 238 7e-61
gi|343927701|ref|ZP_08767169.1| hypothetical protein GOALK_097_0... 205 4e-51
gi|169627629|ref|YP_001701278.1| lipoprotein LpqG [Mycobacterium... 195 6e-48
gi|262203549|ref|YP_003274757.1| hypothetical protein Gbro_3679 ... 187 1e-45
gi|226305671|ref|YP_002765631.1| hypothetical protein RER_21840 ... 174 1e-41
gi|229489359|ref|ZP_04383222.1| LpqG protein [Rhodococcus erythr... 174 1e-41
gi|296140463|ref|YP_003647706.1| hypothetical protein Tpau_2769 ... 150 1e-34
gi|325672630|ref|ZP_08152326.1| lipoprotein lpqG [Rhodococcus eq... 130 1e-28
gi|312139480|ref|YP_004006816.1| lipoprotein [Rhodococcus equi 1... 129 3e-28
gi|169627628|ref|YP_001701277.1| lipoprotein LpqG [Mycobacterium... 128 8e-28
gi|159897564|ref|YP_001543811.1| hypothetical protein Haur_1035 ... 114 1e-23
gi|271964176|ref|YP_003338372.1| hypothetical protein Sros_2663 ... 114 1e-23
gi|309791471|ref|ZP_07685976.1| protein of unknown function DUF5... 112 3e-23
gi|326383225|ref|ZP_08204913.1| hypothetical protein SCNU_09824 ... 110 1e-22
gi|328886507|emb|CCA59746.1| conserved hypothetical protein [Str... 110 2e-22
gi|146337527|ref|YP_001202575.1| hypothetical protein BRADO0381 ... 108 5e-22
gi|148251978|ref|YP_001236563.1| hypothetical protein BBta_0370 ... 106 2e-21
gi|90421741|ref|YP_530111.1| hypothetical protein RPC_0217 [Rhod... 106 3e-21
gi|307944292|ref|ZP_07659633.1| 26 kDa periplasmic immunogenic p... 105 8e-21
gi|300088000|ref|YP_003758522.1| hypothetical protein Dehly_0899... 104 9e-21
gi|284033800|ref|YP_003383731.1| hypothetical protein Kfla_5928 ... 104 1e-20
gi|73748881|ref|YP_308120.1| putative periplasmic protein [Dehal... 102 4e-20
gi|75676962|ref|YP_319383.1| hypothetical protein Nwi_2778 [Nitr... 102 7e-20
gi|85714452|ref|ZP_01045440.1| hypothetical protein NB311A_15912... 101 9e-20
gi|115522351|ref|YP_779262.1| hypothetical protein RPE_0323 [Rho... 99.8 3e-19
gi|338972647|ref|ZP_08628019.1| protein of unknown function DUF5... 99.4 4e-19
gi|56696313|ref|YP_166670.1| outer membrane protein, 28Kda [Rueg... 98.2 1e-18
gi|209883423|ref|YP_002287280.1| outer membrane protein [Oligotr... 97.8 1e-18
>gi|15610759|ref|NP_218140.1| lipoprotein LpqG [Mycobacterium tuberculosis H37Rv]
gi|15843235|ref|NP_338272.1| putative lipoprotein [Mycobacterium tuberculosis CDC1551]
gi|148663486|ref|YP_001285009.1| putative lipoprotein LpqG [Mycobacterium tuberculosis H37Ra]
55 more sequence titles
Length=240
Score = 478 bits (1230), Expect = 4e-133, Method: Compositional matrix adjust.
Identities = 240/240 (100%), Positives = 240/240 (100%), Gaps = 0/240 (0%)
Query 1 MIRLVRHSIALVAAGLAAALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQ 60
MIRLVRHSIALVAAGLAAALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQ
Sbjct 1 MIRLVRHSIALVAAGLAAALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQ 60
Query 61 VTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYR 120
VTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYR
Sbjct 61 VTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYR 120
Query 121 ADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNR 180
ADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNR
Sbjct 121 ADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNR 180
Query 181 ADQYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT 240
ADQYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT
Sbjct 181 ADQYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT 240
>gi|297636295|ref|ZP_06954075.1| lipoprotein lpqG [Mycobacterium tuberculosis KZN 4207]
Length=278
Score = 478 bits (1229), Expect = 4e-133, Method: Compositional matrix adjust.
Identities = 240/240 (100%), Positives = 240/240 (100%), Gaps = 0/240 (0%)
Query 1 MIRLVRHSIALVAAGLAAALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQ 60
MIRLVRHSIALVAAGLAAALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQ
Sbjct 39 MIRLVRHSIALVAAGLAAALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQ 98
Query 61 VTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYR 120
VTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYR
Sbjct 99 VTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYR 158
Query 121 ADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNR 180
ADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNR
Sbjct 159 ADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNR 218
Query 181 ADQYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT 240
ADQYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT
Sbjct 219 ADQYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT 278
>gi|167968542|ref|ZP_02550819.1| lipoprotein lpqG [Mycobacterium tuberculosis H37Ra]
gi|253800661|ref|YP_003033662.1| lipoprotein lpqG [Mycobacterium tuberculosis KZN 1435]
gi|294995467|ref|ZP_06801158.1| lipoprotein lpqG [Mycobacterium tuberculosis 210]
gi|297733289|ref|ZP_06962407.1| lipoprotein lpqG [Mycobacterium tuberculosis KZN R506]
gi|253322164|gb|ACT26767.1| lipoprotein lpqG [Mycobacterium tuberculosis KZN 1435]
gi|339296436|gb|AEJ48547.1| lipoprotein lpqG [Mycobacterium tuberculosis CCDC5079]
Length=266
Score = 477 bits (1228), Expect = 5e-133, Method: Compositional matrix adjust.
Identities = 240/240 (100%), Positives = 240/240 (100%), Gaps = 0/240 (0%)
Query 1 MIRLVRHSIALVAAGLAAALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQ 60
MIRLVRHSIALVAAGLAAALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQ
Sbjct 27 MIRLVRHSIALVAAGLAAALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQ 86
Query 61 VTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYR 120
VTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYR
Sbjct 87 VTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYR 146
Query 121 ADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNR 180
ADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNR
Sbjct 147 ADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNR 206
Query 181 ADQYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT 240
ADQYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT
Sbjct 207 ADQYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT 266
>gi|289445216|ref|ZP_06434960.1| lipoprotein lpqG [Mycobacterium tuberculosis CPHL_A]
gi|289418174|gb|EFD15375.1| lipoprotein lpqG [Mycobacterium tuberculosis CPHL_A]
Length=240
Score = 476 bits (1226), Expect = 1e-132, Method: Compositional matrix adjust.
Identities = 239/240 (99%), Positives = 239/240 (99%), Gaps = 0/240 (0%)
Query 1 MIRLVRHSIALVAAGLAAALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQ 60
MIRLVRHSIALVAAGLAA LSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQ
Sbjct 1 MIRLVRHSIALVAAGLAAGLSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQ 60
Query 61 VTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYR 120
VTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYR
Sbjct 61 VTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYR 120
Query 121 ADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNR 180
ADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNR
Sbjct 121 ADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNR 180
Query 181 ADQYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT 240
ADQYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT
Sbjct 181 ADQYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT 240
>gi|340628588|ref|YP_004747040.1| putative lipoprotein LPQG [Mycobacterium canettii CIPT 140010059]
gi|340006778|emb|CCC45966.1| putative conserved lipoprotein LPQG [Mycobacterium canettii CIPT
140010059]
Length=240
Score = 445 bits (1144), Expect = 3e-123, Method: Compositional matrix adjust.
Identities = 235/240 (98%), Positives = 236/240 (99%), Gaps = 0/240 (0%)
Query 1 MIRLVRHSIALVAAGLAAALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQ 60
MIRLVRHSIALVAAGLAAALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQ
Sbjct 1 MIRLVRHSIALVAAGLAAALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQ 60
Query 61 VTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYR 120
TAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTT VTVAPQYSNPEPAGTATIT YR
Sbjct 61 FTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTGVTVAPQYSNPEPAGTATITAYR 120
Query 121 ADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNR 180
ADN IEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNR
Sbjct 121 ADNAIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNR 180
Query 181 ADQYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT 240
A+QYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT
Sbjct 181 AEQYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT 240
>gi|339300037|gb|AEJ52147.1| lipoprotein lpqG [Mycobacterium tuberculosis CCDC5180]
Length=195
Score = 376 bits (966), Expect = 1e-102, Method: Compositional matrix adjust.
Identities = 190/190 (100%), Positives = 190/190 (100%), Gaps = 0/190 (0%)
Query 1 MIRLVRHSIALVAAGLAAALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQ 60
MIRLVRHSIALVAAGLAAALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQ
Sbjct 1 MIRLVRHSIALVAAGLAAALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQ 60
Query 61 VTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYR 120
VTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYR
Sbjct 61 VTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYR 120
Query 121 ADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNR 180
ADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNR
Sbjct 121 ADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNR 180
Query 181 ADQYAQLSGL 190
ADQYAQLSGL
Sbjct 181 ADQYAQLSGL 190
>gi|31794793|ref|NP_857286.1| lipoprotein LpqG [Mycobacterium bovis AF2122/97]
gi|121639536|ref|YP_979760.1| putative lipoprotein lpqG [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224992033|ref|YP_002646722.1| putative lipoprotein [Mycobacterium bovis BCG str. Tokyo 172]
6 more sequence titles
Length=171
Score = 345 bits (884), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 171/171 (100%), Positives = 171/171 (100%), Gaps = 0/171 (0%)
Query 70 MNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKI 129
MNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKI
Sbjct 1 MNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKI 60
Query 130 HPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSG 189
HPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSG
Sbjct 61 HPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSG 120
Query 190 LRLGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT 240
LRLGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT
Sbjct 121 LRLGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT 171
>gi|240172422|ref|ZP_04751081.1| lipoprotein LpqG [Mycobacterium kansasii ATCC 12478]
Length=249
Score = 342 bits (876), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 178/223 (80%), Positives = 194/223 (87%), Gaps = 2/223 (0%)
Query 19 ALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQ 78
+LSGCDSHN+ GA+PRQVTVFGSGQVQGVPDTL ADV I+ TAADVTSAMNQTNDRQQ
Sbjct 26 SLSGCDSHNASPPGANPRQVTVFGSGQVQGVPDTLTADVAIEFTAADVTSAMNQTNDRQQ 85
Query 79 AVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRL 138
AVI+AL+GAG+DRKDIRTT V++ PQYS+ EP GTATIT YRADN IEVKIHPTDAASRL
Sbjct 86 AVINALLGAGVDRKDIRTTEVSLQPQYSSAEPGGTATITSYRADNAIEVKIHPTDAASRL 145
Query 139 LALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISI 198
LAL+V+TGGDATRISSVSYSI DDSQLVKDARARAF DAKNRA QYAQLSGLRLGKV+SI
Sbjct 146 LALIVTTGGDATRISSVSYSIADDSQLVKDARARAFDDAKNRAQQYAQLSGLRLGKVLSI 205
Query 199 SEASGA--APTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWEL 239
SE SG+ PAPPR + VP+EPGQQTV FSVT VWEL
Sbjct 206 SEGSGSTAPTRTAPPAPPRAATPVPIEPGQQTVSFSVTAVWEL 248
>gi|342862032|ref|ZP_08718676.1| LpqG [Mycobacterium colombiense CECT 3035]
gi|342130572|gb|EGT83881.1| LpqG [Mycobacterium colombiense CECT 3035]
Length=246
Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/243 (73%), Positives = 195/243 (81%), Gaps = 12/243 (4%)
Query 3 RLVRHSIALVAAGLAAA-LSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQV 61
+ +R SIA+ AAGLA A +S CD HN GA PRQVTV G+GQVQGVPDTL ADVGI+
Sbjct 9 KFIRPSIAVAAAGLAVAAISACDKHNPPQSGAGPRQVTVVGTGQVQGVPDTLTADVGIEF 68
Query 62 TAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRA 121
TA DVT+AMNQTNDRQQAVI+AL GAG+DRKDI TT VT++P+Y+NP P+GTA IT YRA
Sbjct 69 TAPDVTTAMNQTNDRQQAVINALTGAGVDRKDISTTEVTLSPEYNNPGPSGTAAITAYRA 128
Query 122 DNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRA 181
N I VKIHPTDAASRLLAL+V TGGDATRI SV YSI DDSQLVKDAR+RAF DAK+RA
Sbjct 129 TNGIAVKIHPTDAASRLLALIVGTGGDATRIKSVRYSIADDSQLVKDARSRAFNDAKSRA 188
Query 182 DQYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGL-----SAVPLEPGQQTVGFSVTVV 236
DQYAQLSGLRLG+V+SISEA+G P PP G S VPLEPGQQTV FSVT V
Sbjct 189 DQYAQLSGLRLGRVLSISEATG------NPPPPVGAPRAMPSMVPLEPGQQTVNFSVTAV 242
Query 237 WEL 239
WEL
Sbjct 243 WEL 245
>gi|296166687|ref|ZP_06849112.1| LpqG protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897952|gb|EFG77533.1| LpqG protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=246
Score = 322 bits (824), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 170/222 (77%), Positives = 184/222 (83%), Gaps = 2/222 (0%)
Query 20 LSGCDSHNSG-SLGADPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQ 78
+S CDS S + G +PRQVTVFGSGQVQGVPDTL ADVGI+ TA DVT+AMNQTNDRQQ
Sbjct 26 MSACDSPPSAPAPGVNPRQVTVFGSGQVQGVPDTLTADVGIEFTAPDVTAAMNQTNDRQQ 85
Query 79 AVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRL 138
AVIDAL GAG+DRKDIRTT VT+ PQ+SNP P GTA ITGYRA N I VKIHP DAASR+
Sbjct 86 AVIDALTGAGVDRKDIRTTDVTLQPQFSNPGPNGTAAITGYRATNAITVKIHPPDAASRM 145
Query 139 LALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISI 198
LAL+V TGGDATRI SVSYSI DDSQLVKDARARAF DAKNRA+QYAQL+GLRLGKV+SI
Sbjct 146 LALIVGTGGDATRIKSVSYSIADDSQLVKDARARAFNDAKNRAEQYAQLAGLRLGKVLSI 205
Query 199 SEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT 240
SEA+ PAP SAVPLEPGQQTV FSVT VWELT
Sbjct 206 SEATEPP-APGPPAPRAMPSAVPLEPGQQTVSFSVTAVWELT 246
>gi|254820406|ref|ZP_05225407.1| LpqG [Mycobacterium intracellulare ATCC 13950]
Length=247
Score = 321 bits (822), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 173/237 (73%), Positives = 190/237 (81%), Gaps = 1/237 (0%)
Query 4 LVRHSIALVAAGLAAAL-SGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQVT 62
LVR SIA+ AAGL A S CD + GA+PRQVTV G+GQVQGVPDTL ADVGI+ T
Sbjct 10 LVRRSIAVAAAGLTVAAASACDEPSPSHPGANPRQVTVLGTGQVQGVPDTLTADVGIEFT 69
Query 63 AADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRAD 122
A DVT+AMNQTNDRQQAVI+AL+GAG+D KDI TT VT+APQY+NP P+GTA ITGYRA
Sbjct 70 APDVTTAMNQTNDRQQAVINALLGAGVDHKDISTTEVTLAPQYNNPGPSGTADITGYRAT 129
Query 123 NDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRAD 182
N + VKIHP DAASRLLALVV TGGDATRI SV YSI DDSQLVKDAR RAF DAK RA+
Sbjct 130 NAVAVKIHPPDAASRLLALVVGTGGDATRIRSVRYSIADDSQLVKDARTRAFNDAKGRAE 189
Query 183 QYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWEL 239
QYAQLSGLRLG+V+SISEA+G P P P S VPLEPGQQTV FSVT VWEL
Sbjct 190 QYAQLSGLRLGRVLSISEATGNPPPVGTPTPRAMPSMVPLEPGQQTVNFSVTAVWEL 246
>gi|183985091|ref|YP_001853382.1| lipoprotein LpqG [Mycobacterium marinum M]
gi|183178417|gb|ACC43527.1| conserved hypothetical lipoprotein LpqG [Mycobacterium marinum
M]
Length=248
Score = 318 bits (814), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 161/223 (73%), Positives = 180/223 (81%), Gaps = 1/223 (0%)
Query 19 ALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQ 78
LSGCDSH + + GA+PRQVTVFGSGQVQG+PDTL A VGI+ T+ DVT AM+Q N RQQ
Sbjct 26 CLSGCDSHTAAAPGANPRQVTVFGSGQVQGIPDTLTAQVGIEFTSQDVTGAMSQANARQQ 85
Query 79 AVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRL 138
AVIDAL AG+DRKDIRTT V++ PQY++PEP A I+ YRADN IEVKI P DAASRL
Sbjct 86 AVIDALANAGVDRKDIRTTEVSLQPQYTSPEPGAAAAISSYRADNAIEVKIRPPDAASRL 145
Query 139 LALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISI 198
L L+V+TGGDATRISSVSYSI DDSQLVKDARARAF+DAK+RA QYAQLSGLRLG V+SI
Sbjct 146 LELIVNTGGDATRISSVSYSIEDDSQLVKDARARAFEDAKSRAQQYAQLSGLRLGTVLSI 205
Query 199 SEASGAAPTH-EAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT 240
SE G P+ E P S VPLEPGQQTV FSVT VWELT
Sbjct 206 SEGVGTRPSPGEMNTPAPRTSMVPLEPGQQTVSFSVTAVWELT 248
>gi|118619372|ref|YP_907704.1| lipoprotein LpqG [Mycobacterium ulcerans Agy99]
gi|118571482|gb|ABL06233.1| conserved hypothetical lipoprotein LpqG [Mycobacterium ulcerans
Agy99]
Length=248
Score = 315 bits (806), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/223 (72%), Positives = 179/223 (81%), Gaps = 1/223 (0%)
Query 19 ALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQ 78
LSGCDSH + + GA+PRQVT+FG GQVQG+PDTL A VGI+ T+ DVT AM+Q N RQQ
Sbjct 26 CLSGCDSHTAAAPGANPRQVTMFGCGQVQGIPDTLTAQVGIEFTSQDVTGAMSQANARQQ 85
Query 79 AVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRL 138
AVIDAL AG+DRKDIRTT V++ PQY++PEP A I+ YRADN IEVKI P DAASRL
Sbjct 86 AVIDALANAGVDRKDIRTTEVSLQPQYTSPEPGAAAAISSYRADNAIEVKIRPPDAASRL 145
Query 139 LALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISI 198
L L+V+TGGDATRISSVSYSI DDSQLVKDARARAF+DAK+RA QYAQLSGLRLG V+SI
Sbjct 146 LELIVNTGGDATRISSVSYSIEDDSQLVKDARARAFEDAKSRAQQYAQLSGLRLGTVLSI 205
Query 199 SEASGAAPTH-EAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT 240
SE G P+ E P S VPLEPGQQTV FSVT VWELT
Sbjct 206 SEGVGTRPSPGEMNTPAPRTSMVPLEPGQQTVSFSVTAVWELT 248
>gi|41406538|ref|NP_959374.1| LpqG [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41394887|gb|AAS02757.1| LpqG [Mycobacterium avium subsp. paratuberculosis K-10]
Length=249
Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 162/221 (74%), Positives = 177/221 (81%), Gaps = 2/221 (0%)
Query 21 SGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAV 80
S CD H GA PRQVTV GSGQVQGVPDTL ADVGI+ TA DVT+AMNQTN+RQQAV
Sbjct 28 SACDKHGPPPSGAAPRQVTVVGSGQVQGVPDTLTADVGIEFTAPDVTTAMNQTNERQQAV 87
Query 81 IDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLA 140
I+ALVGAG+D KDI TT V + PQYSNPE G+A ITGYRA N + VKIHP DAASRLLA
Sbjct 88 INALVGAGIDHKDISTTEVALTPQYSNPEAGGSAAITGYRASNAVAVKIHPPDAASRLLA 147
Query 141 LVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISE 200
L+V TGGDATRI SVSYSI DDSQLVKDAR RAF DAK+RA+QYAQLSGL LGKV+SISE
Sbjct 148 LIVGTGGDATRIRSVSYSIADDSQLVKDARTRAFNDAKSRAEQYAQLSGLHLGKVLSISE 207
Query 201 ASG-AAPTHEAPAPPRGLS-AVPLEPGQQTVGFSVTVVWEL 239
A+G A P P PR + AVPLEPGQQTV F+VT WEL
Sbjct 208 ATGNAPPPGGPPPSPRAMPMAVPLEPGQQTVKFTVTASWEL 248
>gi|336460936|gb|EGO39819.1| hypothetical protein MAPs_36020 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=249
Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/221 (73%), Positives = 177/221 (81%), Gaps = 2/221 (0%)
Query 21 SGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAV 80
S CD H GA PRQVTV GSGQVQGVPDTL ADVGI+ TA DVT+AMNQTN+RQQAV
Sbjct 28 SACDKHGPPPSGAAPRQVTVVGSGQVQGVPDTLTADVGIEFTAPDVTTAMNQTNERQQAV 87
Query 81 IDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLA 140
++ALVGAG+D KDI TT V + PQYSNPE G+A ITGYRA N + VKIHP DAASRLLA
Sbjct 88 VNALVGAGIDHKDISTTEVALTPQYSNPEAGGSAAITGYRASNAVAVKIHPPDAASRLLA 147
Query 141 LVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISE 200
L+V TGGDATRI SVSYSI DDSQLVKDAR RAF DAK+RA+QYAQLSGL LGKV+SISE
Sbjct 148 LIVGTGGDATRIRSVSYSIADDSQLVKDARTRAFNDAKSRAEQYAQLSGLHLGKVLSISE 207
Query 201 ASG-AAPTHEAPAPPRGLS-AVPLEPGQQTVGFSVTVVWEL 239
A+G A P P PR + AVPLEPGQQTV F+VT WEL
Sbjct 208 ATGNAPPPGGPPPSPRAMPMAVPLEPGQQTVKFTVTASWEL 248
>gi|254773194|ref|ZP_05214710.1| LpqG [Mycobacterium avium subsp. avium ATCC 25291]
Length=249
Score = 306 bits (783), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/221 (73%), Positives = 177/221 (81%), Gaps = 2/221 (0%)
Query 21 SGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAV 80
S CD H GA PRQVTV GSGQVQGVPDTL ADVGI+ TA DVT+AMN+TN+RQQAV
Sbjct 28 SACDKHGPPPSGAAPRQVTVVGSGQVQGVPDTLTADVGIEFTAPDVTTAMNETNERQQAV 87
Query 81 IDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLA 140
I+ALVGAG+D KDI TT V + PQYSNPE G+A ITGYRA N + VKIHP DAASRLLA
Sbjct 88 INALVGAGIDHKDISTTEVALTPQYSNPEAGGSAAITGYRASNAVAVKIHPPDAASRLLA 147
Query 141 LVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISE 200
L+V TGGDATRI SVSYSI DDSQLVKDAR RAF DAK+RA+QYAQLSGL LGKV+SISE
Sbjct 148 LIVGTGGDATRIRSVSYSIADDSQLVKDARTRAFNDAKSRAEQYAQLSGLHLGKVLSISE 207
Query 201 ASG-AAPTHEAPAPPRGLS-AVPLEPGQQTVGFSVTVVWEL 239
A+G A P P PR + AVPLEPGQQTV F+VT WEL
Sbjct 208 ATGNAPPPGGPPPSPRAMPMAVPLEPGQQTVKFTVTASWEL 248
>gi|118467102|ref|YP_879813.1| LpqG protein [Mycobacterium avium 104]
gi|118168389|gb|ABK69286.1| LpqG protein [Mycobacterium avium 104]
Length=249
Score = 306 bits (783), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/221 (73%), Positives = 177/221 (81%), Gaps = 2/221 (0%)
Query 21 SGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAV 80
S CD H GA PRQVTV GSGQVQGVPDTL ADVGI+ TA DVT+AMNQTN+RQQAV
Sbjct 28 SACDKHGPPPSGAAPRQVTVVGSGQVQGVPDTLTADVGIEFTAPDVTTAMNQTNERQQAV 87
Query 81 IDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLA 140
I+ALVGAG+D KDI TT V + PQYSNPE G+A ITGYRA N + VKIHP DAASRLLA
Sbjct 88 INALVGAGIDHKDISTTEVALTPQYSNPEAGGSAAITGYRASNAVAVKIHPPDAASRLLA 147
Query 141 LVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISE 200
L++ TGGDATRI SVSYSI DDSQLVKDAR RAF DAK+RA+QYAQLSGL LGKV+SISE
Sbjct 148 LILGTGGDATRIRSVSYSIADDSQLVKDARTRAFNDAKSRAEQYAQLSGLHLGKVLSISE 207
Query 201 ASG-AAPTHEAPAPPRGLS-AVPLEPGQQTVGFSVTVVWEL 239
A+G A P P PR + AVPLEPGQQTV F+VT WEL
Sbjct 208 ATGNAPPPGGPPPSPRAMPMAVPLEPGQQTVKFTVTASWEL 248
>gi|333992544|ref|YP_004525158.1| hypothetical protein JDM601_3904 [Mycobacterium sp. JDM601]
gi|333488512|gb|AEF37904.1| lipoprotein LpqG [Mycobacterium sp. JDM601]
Length=248
Score = 281 bits (719), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 149/241 (62%), Positives = 187/241 (78%), Gaps = 7/241 (2%)
Query 5 VRHSIALVAAGLA-AALSGCDSHNSGSLGADP-RQVTVFGSGQVQGVPDTLIADVGIQVT 62
+R S L AGL AAL+GCD+ G+ G +P RQVTV GSG+VQG+PDTL + GI+
Sbjct 10 LRWSTTLALAGLTTAALAGCDAV-PGADGPEPSRQVTVVGSGEVQGIPDTLTTEAGIEFV 68
Query 63 AADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRAD 122
AADVT+AMNQT++RQQAVIDAL+ AG+DRKDI TT+V++ PQY N EP G+A ITGYRA
Sbjct 69 AADVTTAMNQTSERQQAVIDALIDAGVDRKDISTTQVSLQPQYGNAEPGGSANITGYRAG 128
Query 123 NDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRAD 182
N I VK+ ++AS++LA++V GGDATRI +SYSI DDSQLV+DAR RAF DA++RA+
Sbjct 129 NTIRVKVE-RESASQVLAVIVRAGGDATRIHGISYSIEDDSQLVRDARERAFNDARDRAE 187
Query 183 QYAQLSGLRLGKVISISEASGAAPTH---EAPAPPRGLSAVPLEPGQQTVGFSVTVVWEL 239
QYAQLSGL+LG+V+SISE +G P+ EAP P + P+EPGQQTVGFSVT VWEL
Sbjct 188 QYAQLSGLQLGRVLSISEVAGGTPSPTSVEAPMPRAMAAPPPVEPGQQTVGFSVTAVWEL 247
Query 240 T 240
+
Sbjct 248 S 248
>gi|118468042|ref|YP_890330.1| LpqG protein [Mycobacterium smegmatis str. MC2 155]
gi|118169329|gb|ABK70225.1| LpqG protein [Mycobacterium smegmatis str. MC2 155]
Length=243
Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/229 (63%), Positives = 171/229 (75%), Gaps = 6/229 (2%)
Query 14 AGLAA-ALSGCDSHNSGSLGA-DPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMN 71
AGLA A+ GCD+ + G+ DPRQVTV G GQVQGVPDTL +V ++ AADV+SA+N
Sbjct 19 AGLAVLAVGGCDASSGPVAGSGDPRQVTVVGEGQVQGVPDTLTTNVAMEFIAADVSSALN 78
Query 72 QTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHP 131
Q++ RQQAVIDALV AG+DRKDI TT+V+V PQ+ + TITGYRA N I+VKI
Sbjct 79 QSSQRQQAVIDALVAAGIDRKDISTTQVSVQPQFGTD--GASNTITGYRASNTIDVKIRD 136
Query 132 TDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLR 191
D AS+ L L+ TGGDATRI+SV++SI DDS LV+DARA AF DAKNRA QYA LSGL
Sbjct 137 LDTASQTLTLIAETGGDATRINSVAFSIEDDSDLVRDARAEAFNDAKNRAQQYADLSGLS 196
Query 192 LGKVISISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT 240
LG+VISISE SG+ P P P + AVPLEPGQQ V FSVTV+WELT
Sbjct 197 LGEVISISEESGSTPPR--PMPRAAMEAVPLEPGQQAVNFSVTVIWELT 243
>gi|108801737|ref|YP_641934.1| hypothetical protein Mmcs_4774 [Mycobacterium sp. MCS]
gi|119870888|ref|YP_940840.1| hypothetical protein Mkms_4860 [Mycobacterium sp. KMS]
gi|126437724|ref|YP_001073415.1| hypothetical protein Mjls_5160 [Mycobacterium sp. JLS]
gi|108772156|gb|ABG10878.1| protein of unknown function DUF541 [Mycobacterium sp. MCS]
gi|119696977|gb|ABL94050.1| protein of unknown function DUF541 [Mycobacterium sp. KMS]
gi|126237524|gb|ABO00925.1| protein of unknown function DUF541 [Mycobacterium sp. JLS]
Length=241
Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/237 (62%), Positives = 181/237 (77%), Gaps = 14/237 (5%)
Query 9 IALVAAGLA-AALSGCDSHN--SGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQVTAAD 65
+ VAAG+ A ++GCD+ + + S A+ RQVTV GSG+VQG PDTL A V ++ AAD
Sbjct 12 LTFVAAGVTVAGVAGCDATSGPAASGSAETRQVTVVGSGEVQGAPDTLTAGVAMEAIAAD 71
Query 66 VTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDI 125
VT AMNQ+ +RQQAVI+ALV AG+ R+DI TT+V++ PQ+ A I GYRA N I
Sbjct 72 VTGAMNQSGERQQAVINALVDAGIAREDISTTQVSLQPQFG----ADGTDIIGYRASNSI 127
Query 126 EVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYA 185
+VKI AAS+ LAL+VSTGGDATRI+SV+YSI DDSQL++DARARAF+DAKNRA+QYA
Sbjct 128 DVKIRDLSAASQALALIVSTGGDATRINSVNYSIEDDSQLIRDARARAFEDAKNRAEQYA 187
Query 186 QLSGLRLGKVISISEASGAAPTHEAPAP-PRGLS--AVPLEPGQQTVGFSVTVVWEL 239
QLSGL LG V+SISE+ G+ P P P PRG + AVPLEPG+QTVGFSVTV+WEL
Sbjct 188 QLSGLDLGDVVSISESPGSTP----PTPMPRGEAAMAVPLEPGRQTVGFSVTVIWEL 240
>gi|120406323|ref|YP_956152.1| hypothetical protein Mvan_5375 [Mycobacterium vanbaalenii PYR-1]
gi|119959141|gb|ABM16146.1| protein of unknown function DUF541 [Mycobacterium vanbaalenii
PYR-1]
Length=245
Score = 251 bits (640), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 132/220 (60%), Positives = 161/220 (74%), Gaps = 6/220 (2%)
Query 23 CDSHNSGSL--GADPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAV 80
CD+ + SL GAD RQVTV G+GQVQG PDTL + ++ D T+AMNQTN+RQQAV
Sbjct 30 CDAQSGPSLEPGADSRQVTVVGAGQVQGTPDTLTVNASMEFVGPDATAAMNQTNERQQAV 89
Query 81 IDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLA 140
ID LV G+DRKDI TT + PQY+ + + +IT YRA N + V + AS +
Sbjct 90 IDGLVELGIDRKDIATTAADLQPQYN----SDSTSITAYRATNSVNVTLRDLGRASDAIG 145
Query 141 LVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISE 200
L+V+TGG+ATRI+S+SYSI DDSQLV+DARARAF+DAK+RA QYA+LSGL LGKVISISE
Sbjct 146 LIVATGGNATRINSISYSIEDDSQLVRDARARAFEDAKDRAAQYAELSGLNLGKVISISE 205
Query 201 ASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT 240
+ G P AP +AVPLEPGQQTVGFSVTV+WELT
Sbjct 206 SGGPTPPVPMQAPRAMEAAVPLEPGQQTVGFSVTVIWELT 245
>gi|145222006|ref|YP_001132684.1| hypothetical protein Mflv_1414 [Mycobacterium gilvum PYR-GCK]
gi|145214492|gb|ABP43896.1| protein of unknown function DUF541 [Mycobacterium gilvum PYR-GCK]
Length=244
Score = 242 bits (618), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/221 (59%), Positives = 161/221 (73%), Gaps = 5/221 (2%)
Query 21 SGCDSHNSG-SLGADPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQA 79
+ CD+ ++ + G D RQVTV G+G+VQG PDTL + ++ D T+AMNQTN+RQQA
Sbjct 28 TACDARSTAPAPGTDSRQVTVVGAGEVQGTPDTLTVNASMEFLGPDATAAMNQTNERQQA 87
Query 80 VIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLL 139
VID LVG G+DR DI TT + PQY + GTA I YRA N + V I AS +
Sbjct 88 VIDGLVGLGIDRADIATTAADLQPQYGS---NGTA-IAAYRATNTVNVTIRDLAQASDAI 143
Query 140 ALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISIS 199
+LVV+TGGDA RI+S++YSI DDS+LV+DARARAF+DAK+RA QYA+LSGL LGKVISI+
Sbjct 144 SLVVNTGGDAARINSIAYSIEDDSELVRDARARAFEDAKDRAGQYAELSGLSLGKVISIA 203
Query 200 EASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT 240
E+ GA P AP +AVP+EPGQQTVGFSVTVVWELT
Sbjct 204 ESGGAPPPVPMQAPRAMEAAVPMEPGQQTVGFSVTVVWELT 244
>gi|315446254|ref|YP_004079133.1| hypothetical protein Mspyr1_47570 [Mycobacterium sp. Spyr1]
gi|315264557|gb|ADU01299.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=244
Score = 238 bits (606), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 128/221 (58%), Positives = 160/221 (73%), Gaps = 5/221 (2%)
Query 21 SGCDSHNSG-SLGADPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQA 79
+ CD+ ++ + G D RQVTV G+G+VQG PDTL + ++ D T+AMNQT++RQQA
Sbjct 28 TACDARSTAPAPGTDSRQVTVVGAGEVQGTPDTLTVNASMEFLGPDATAAMNQTDERQQA 87
Query 80 VIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLL 139
VID LVG G+DR DI TT + PQY + GTA I YRA N + V I AS +
Sbjct 88 VIDGLVGLGIDRADIATTAADLQPQYGS---NGTA-IAAYRATNTVNVTIRDLAQASDAI 143
Query 140 ALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISIS 199
+LVV+TGGDA RI+S++YSI DDS+LV+DARARAF+DAK+RA QYA+LSGL LGKVISI+
Sbjct 144 SLVVNTGGDAARINSIAYSIEDDSELVRDARARAFEDAKDRAGQYAELSGLSLGKVISIA 203
Query 200 EASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWELT 240
E+ GA P AP +AVP+EPGQQ VGFSVTVVWELT
Sbjct 204 ESGGAPPPVPMQAPRAMEAAVPMEPGQQMVGFSVTVVWELT 244
>gi|343927701|ref|ZP_08767169.1| hypothetical protein GOALK_097_01230 [Gordonia alkanivorans NBRC
16433]
gi|343762342|dbj|GAA14095.1| hypothetical protein GOALK_097_01230 [Gordonia alkanivorans NBRC
16433]
Length=247
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/244 (48%), Positives = 158/244 (65%), Gaps = 16/244 (6%)
Query 4 LVRHSIALVAAGLAAALSGCDSHNSGSLGA--DPRQVTVFGSGQVQGVPDTLIADVGIQV 61
L R + V LA L+ C GS GA R VTV G+GQV G PDTL AD+G++
Sbjct 11 LRRIGVVAVVPALALTLAAC-----GSAGAVDQQRSVTVVGTGQVSGAPDTLRADIGVEA 65
Query 62 TAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRA 121
TA DVT+A+N+T+++ +AV D++V AG++RKD+ T +V+V PQYS+P P G++ I+GY A
Sbjct 66 TAGDVTTALNETSEKVRAVTDSVVDAGVERKDVATQQVSVTPQYSSPAPGGSSQISGYMA 125
Query 122 DNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRA 181
N I V I AS +L+ + GGD TRIS+VS++I DDSQL+K+AR AF DA+ RA
Sbjct 126 TNSIRVTIRDISKASTVLSAAATAGGDNTRISNVSFTIDDDSQLLKEAREAAFDDARGRA 185
Query 182 DQYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGL------SAVPLEPGQQTVGFSVTV 235
+QYA L+ LGKV++I E + E PA P S VP+EPG+Q + F+VTV
Sbjct 186 EQYASLADDSLGKVLTIKETTSG---QEQPASPGTFERDVAASPVPIEPGEQELTFTVTV 242
Query 236 VWEL 239
+ L
Sbjct 243 TFGL 246
>gi|169627629|ref|YP_001701278.1| lipoprotein LpqG [Mycobacterium abscessus ATCC 19977]
gi|169239596|emb|CAM60624.1| Probable conserved lipoprotein LpqG [Mycobacterium abscessus]
Length=249
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 106/224 (48%), Positives = 143/224 (64%), Gaps = 8/224 (3%)
Query 22 GCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAVI 81
GC ++G + R VTV G G+V+G PD L ADVG+ VTA DV+ A++Q N + QAVI
Sbjct 27 GCGDDSTGGPESS-RNVTVVGKGEVKGAPDVLRADVGVSVTAKDVSGALSQANQKAQAVI 85
Query 82 DALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLAL 141
DA+VGAG+ R+D++T +++ P+ + P P G ITGY A N + + + AS +L
Sbjct 86 DAVVGAGVAREDVQTNELSIQPEQTYP-PGGPTRITGYNATNSVRINVRDLKKASEVLDK 144
Query 142 VVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISEA 201
V GGDA R+S VS+ + +D+ L+K AR RAF DAK+RA+QYA LSG LGKV+ I E+
Sbjct 145 AVQAGGDAARLSGVSFDLDNDADLMKGARERAFNDAKSRAEQYAALSGSTLGKVLRIDES 204
Query 202 SGAAPT------HEAPAPPRGLSAVPLEPGQQTVGFSVTVVWEL 239
G+ P AP A PLEPGQQTV F V+V+WEL
Sbjct 205 HGSVPPPPPPMGKRAPMQADASFAPPLEPGQQTVSFQVSVIWEL 248
>gi|262203549|ref|YP_003274757.1| hypothetical protein Gbro_3679 [Gordonia bronchialis DSM 43247]
gi|262086896|gb|ACY22864.1| protein of unknown function DUF541 [Gordonia bronchialis DSM
43247]
Length=237
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/228 (48%), Positives = 146/228 (65%), Gaps = 9/228 (3%)
Query 15 GLAAALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTN 74
G+AA ++GC S + R VTV GSG V G PDTL AD+GI+ T ADV++A+++ N
Sbjct 15 GVAALVTGCGDDASDTA---QRTVTVVGSGTVSGTPDTLRADIGIEATGADVSAALDEAN 71
Query 75 DRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDA 134
R + V DA+ GAG+ R DI+T +VT++PQY++P P ITGY+A N I V I
Sbjct 72 TRVRVVTDAVAGAGVPRTDIQTQQVTLSPQYASPVPGSAGQITGYQATNTIRVIIRDLPK 131
Query 135 ASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGK 194
AS +L V GG+ TRIS+VS++I D+S L+ AR AF DA+ RA+QYA L+ LG+
Sbjct 132 ASGVLKAAVDAGGNNTRISNVSFAIDDNSNLMSRAREAAFTDARTRAEQYATLADDSLGQ 191
Query 195 VISISEASGAAPTHEAPAPPR---GLSAVPLEPGQQTVGFSVTVVWEL 239
VI+I E + E PAP + S VPLEPGQQ + FSVTV + L
Sbjct 192 VITIKETTSG---DEQPAPYQRDVASSPVPLEPGQQRLTFSVTVTYAL 236
>gi|226305671|ref|YP_002765631.1| hypothetical protein RER_21840 [Rhodococcus erythropolis PR4]
gi|226184788|dbj|BAH32892.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=237
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/221 (44%), Positives = 146/221 (67%), Gaps = 6/221 (2%)
Query 20 LSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQA 79
L+ C S ++ + ++VTV GSGQV+G PD L AD+GI+V A DV+ A++++ND+ +
Sbjct 21 LTACGSSDNAA-----KEVTVVGSGQVRGAPDILNADIGIEVVAPDVSGAVSESNDKARQ 75
Query 80 VIDALVGAGLDRKDIRTTRVTVAPQY-SNPEPAGTATITGYRADNDIEVKIHPTDAASRL 138
+IDA+V AG+ +D++T+ ++V PQY ++ P +TGYRA N + + + D AS +
Sbjct 76 MIDAIVAAGVAPEDVQTSDLSVQPQYDASGGPFVGGNVTGYRATNSVRIVVRDLDKASSV 135
Query 139 LALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISI 198
L ++ GG+A R+ +V+++I DDSQL+ DAR RAF+DAKNRA+QYA LSG L V++I
Sbjct 136 LDAGIAAGGNAARLGNVAFAIDDDSQLLADARTRAFEDAKNRAEQYADLSGTSLENVVTI 195
Query 199 SEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWEL 239
+EA + AP +S + L PG Q V F VTV W L
Sbjct 196 TEAHDTSGGQTMRAPDASMSDMVLAPGTQQVSFEVTVTWAL 236
>gi|229489359|ref|ZP_04383222.1| LpqG protein [Rhodococcus erythropolis SK121]
gi|229323456|gb|EEN89214.1| LpqG protein [Rhodococcus erythropolis SK121]
Length=237
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/222 (44%), Positives = 146/222 (66%), Gaps = 6/222 (2%)
Query 19 ALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQ 78
+L+ C S ++ + ++VTV GSGQV+G PD L AD+GI+V A DV+ A+++ ND+ +
Sbjct 20 SLTACGSSDNAA-----KEVTVVGSGQVRGAPDILNADIGIEVVAPDVSGAVSEANDKAR 74
Query 79 AVIDALVGAGLDRKDIRTTRVTVAPQY-SNPEPAGTATITGYRADNDIEVKIHPTDAASR 137
+IDA+V AG+ +D++T+ ++V PQY ++ P +TGYRA N + + + D AS
Sbjct 75 QMIDAIVAAGVAPEDVQTSDLSVQPQYDASGGPFIGGNVTGYRATNSVRIVVRDLDKASS 134
Query 138 LLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVIS 197
+L ++ GG+A R+ +V+++I DDSQL+ DAR RAF+DAKNRA+QYA LSG L V++
Sbjct 135 VLDAGIAAGGNAARLGNVAFAIDDDSQLLADARTRAFEDAKNRAEQYADLSGTSLENVVT 194
Query 198 ISEASGAAPTHEAPAPPRGLSAVPLEPGQQTVGFSVTVVWEL 239
I+EA + AP +S + L PG Q V F VTV W L
Sbjct 195 ITEAHDTSGGQTMRAPDASMSDMVLAPGTQQVSFEVTVTWSL 236
>gi|296140463|ref|YP_003647706.1| hypothetical protein Tpau_2769 [Tsukamurella paurometabola DSM
20162]
gi|296028597|gb|ADG79367.1| protein of unknown function DUF541 [Tsukamurella paurometabola
DSM 20162]
Length=247
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/217 (41%), Positives = 128/217 (59%), Gaps = 11/217 (5%)
Query 29 GSLGADPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAVIDALVGAG 88
G PR++T G+G+ G PD L + +Q A DV+SA+NQ+++ Q VID G
Sbjct 35 GDSNGSPREITAVGTGEASGKPDVLTVKMAVQHQAGDVSSALNQSSEGAQKVIDTAAANG 94
Query 89 LDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLALVVSTGGD 148
+DRKDI T V V+ + + P+ A IT Y A + +K+ D AS+LL + + GG+
Sbjct 95 VDRKDISTANVDVSAR-TGPDQA----ITAYEATQSLTIKVRKLDTASKLLGDLATAGGN 149
Query 149 ATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISEA-SGAAPT 207
TRI+SV + I +D L AR +AF AK RA+QYA+L+G +LG+V ++SE S AP
Sbjct 150 GTRINSVGFDIENDDALKATARDKAFAAAKTRAEQYAKLAGGKLGEVRTVSEVPSARAPG 209
Query 208 HEAPAPPRGLSA-----VPLEPGQQTVGFSVTVVWEL 239
+ P GL VP+E G+Q++ +VTVVW L
Sbjct 210 TRDFSAPGGLQGTAAAPVPIESGEQSLSVTVTVVWSL 246
>gi|325672630|ref|ZP_08152326.1| lipoprotein lpqG [Rhodococcus equi ATCC 33707]
gi|325556507|gb|EGD26173.1| lipoprotein lpqG [Rhodococcus equi ATCC 33707]
Length=255
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/239 (37%), Positives = 136/239 (57%), Gaps = 9/239 (3%)
Query 6 RHSIALVAA-GLAAALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQVTAA 64
+H+IA VAA G AL+GC S S S G P ++ G+G + G PDTL +G+Q AA
Sbjct 20 QHTIATVAAAGFLLALTGCASGQSDSPGTQPTGISSQGTGTITGTPDTLTVVLGVQTQAA 79
Query 65 DVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADND 124
+ +A+ + R A+ID L G+ +DIRT+ ++V P ++ G A I GY+ N
Sbjct 80 EAQAALQDNSQRATALIDTLESKGVAAEDIRTSELSVNPTWA----PGGAGIDGYQVTNQ 135
Query 125 IEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQY 184
+ +H A ++ S GDA R+ S+SI DDS+L +AR+RA Q A+++A Q
Sbjct 136 VTATLHDVSQAGAVIDAAASATGDAVRVQQTSFSISDDSELRAEARSRAVQQAQDQARQM 195
Query 185 AQLSGLRLGKVISISEA---SGAAPTHEAPAPPRGLS-AVPLEPGQQTVGFSVTVVWEL 239
A+ +G+ LG+V SI E + +P+ P L+ AVP++PG Q + +V V +++
Sbjct 196 AEAAGVELGRVRSIVEVPPQAAGSPSPYMRTPDMALADAVPIQPGSQELSVNVAVTYDI 254
>gi|312139480|ref|YP_004006816.1| lipoprotein [Rhodococcus equi 103S]
gi|311888819|emb|CBH48131.1| putative lipoprotein [Rhodococcus equi 103S]
Length=242
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/239 (37%), Positives = 135/239 (57%), Gaps = 9/239 (3%)
Query 6 RHSIALVAA-GLAAALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQVTAA 64
+H+IA VAA G AL+GC S S S P ++ G+G + G PDTL +G+Q AA
Sbjct 7 QHTIATVAAAGFLLALTGCASGQSDSPRTQPTGISSQGTGTITGTPDTLTVVLGVQTQAA 66
Query 65 DVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADND 124
+ +A+ + R A+ID L G+ +DIRT+ ++V P ++ G A I GY+ N
Sbjct 67 EAQAALQDNSQRATALIDTLESKGVAAEDIRTSELSVNPTWA----PGGAGINGYQVTNQ 122
Query 125 IEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQY 184
+ +H A ++ S GDA R+ S+SI DDS+L +AR+RA Q A+++A Q
Sbjct 123 VTATLHDVSQAGAVIDAAASATGDAVRVQQTSFSISDDSELRAEARSRAVQQAQDQARQM 182
Query 185 AQLSGLRLGKVISISEA---SGAAPTHEAPAPPRGLS-AVPLEPGQQTVGFSVTVVWEL 239
A+ +G+ LGKV SI E + +P+ P L+ AVP++PG Q + +V V +++
Sbjct 183 AEAAGVELGKVRSIVEVPPQAAGSPSPYMRTPDMALADAVPIQPGSQELSVNVAVTYDI 241
>gi|169627628|ref|YP_001701277.1| lipoprotein LpqG [Mycobacterium abscessus ATCC 19977]
gi|169239595|emb|CAM60623.1| Probable conserved lipoprotein LpqG [Mycobacterium abscessus]
Length=202
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/204 (40%), Positives = 112/204 (55%), Gaps = 8/204 (3%)
Query 38 VTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTT 97
+TV G G+ G PD +A VG+ V + + M + +AVIDA++ AG+ D+RT
Sbjct 4 ITVVGHGEASGSPDVFMATVGVSVRSRRIAGVMADVKAKARAVIDAVIDAGVAADDVRTA 63
Query 98 RVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSY 157
++V PQ+ ITGY ADN + + + S +L V+ GG+A ++S VS+
Sbjct 64 WMSVHPQFDGNR------ITGYAADNSVRIIVRDLSKVSDVLDKAVTAGGEAAQLSGVSF 117
Query 158 SIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISEASGAAPTHEAP--APPR 215
+ D + L AR RAF DAK RA+QYA L+G LGKV+ I E G A H A R
Sbjct 118 DLQDSTALAALARERAFSDAKTRAEQYAALAGRTLGKVLRIDETGGTASPHPRAEFAMLR 177
Query 216 GLSAVPLEPGQQTVGFSVTVVWEL 239
S P+E GQ V ++TV WEL
Sbjct 178 ASSGPPVEAGQHAVSAAITVAWEL 201
>gi|159897564|ref|YP_001543811.1| hypothetical protein Haur_1035 [Herpetosiphon aurantiacus DSM
785]
gi|159890603|gb|ABX03683.1| protein of unknown function DUF541 [Herpetosiphon aurantiacus
DSM 785]
Length=243
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/207 (35%), Positives = 118/207 (58%), Gaps = 9/207 (4%)
Query 36 RQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIR 95
++++V G G+V+ PD +G+ AAD SA+++ N + A+I+ L AG+ DI+
Sbjct 42 KRISVTGRGEVKVTPDIAYVTIGVNTNAADAKSALSENNTKMNALIEQLKAAGIADADIQ 101
Query 96 TTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLALVVSTGGDATRISSV 155
TT + ++P Y T + GY +N + VK+ +DA LL VV G A IS +
Sbjct 102 TTNLNISPSYD--YSGNTPVLKGYDVNNSVRVKVSVSDAGG-LLDKVVEVG--ANNISGL 156
Query 156 SYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISEASGAAPTHEAPAPPR 215
S+ + D ++ ++ AR A +DA+ RA+QYA +S ++G+V+ ISE S T+ R
Sbjct 157 SFDVADPAKSLEAARQAAIKDAQLRAEQYAAVSNAQVGEVLVISETSTPV-TYPVAYESR 215
Query 216 GLSA---VPLEPGQQTVGFSVTVVWEL 239
++A P++PGQQ+ V V++EL
Sbjct 216 DMAAGAGAPIQPGQQSQVIEVQVIFEL 242
>gi|271964176|ref|YP_003338372.1| hypothetical protein Sros_2663 [Streptosporangium roseum DSM
43021]
gi|270507351|gb|ACZ85629.1| conserved hypothetical protein [Streptosporangium roseum DSM
43021]
Length=243
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/203 (34%), Positives = 114/203 (57%), Gaps = 6/203 (2%)
Query 37 QVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRT 96
Q+TV G G + VPD + + G++V A ++A + +AL+GAG+ KD++T
Sbjct 46 QITVVGEGNLSSVPDVMHLNAGVEVRRASASAAFADARKAAAKLTEALLGAGIAAKDLQT 105
Query 97 TRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVS 156
+++ P Y + + GYRA +E + D+A +++ V + G +A R++ VS
Sbjct 106 NELSLGPVYDD-----YPVVAGYRAAQGVEAVVRDIDSADKVIDAVAAVGEEA-RLNGVS 159
Query 157 YSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISEASGAAPTHEAPAPPRG 216
+ + D ++++ AR AF+DA+ RA+QYA+L+G LG+++SISE P+ A
Sbjct 160 FEVSDTRKVLRAARDAAFEDARARAEQYARLAGDELGRIVSISEEGVTPPSPVAFGGAMM 219
Query 217 LSAVPLEPGQQTVGFSVTVVWEL 239
+ PGQQTV + VV+EL
Sbjct 220 ADKASVSPGQQTVSVHIRVVYEL 242
>gi|309791471|ref|ZP_07685976.1| protein of unknown function DUF541 [Oscillochloris trichoides
DG6]
gi|308226507|gb|EFO80230.1| protein of unknown function DUF541 [Oscillochloris trichoides
DG6]
Length=248
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/207 (35%), Positives = 110/207 (54%), Gaps = 9/207 (4%)
Query 36 RQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIR 95
RQ+TV G+G+V+ PDT +G++ TAA A+ Q + A+I+ + G+ KDI+
Sbjct 47 RQITVIGTGEVRIAPDTATVQIGVETTAATTQEALAQNTAQANAIIEQIKALGIAEKDIQ 106
Query 96 TTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLALVVSTGGDATRISSV 155
T+ + P Y+N +TGY N + V I A LL VV G A RI +
Sbjct 107 TSGFNIYPTYNN----DGRQVTGYTVSNQVSVTIRNLADAGSLLDNVVQAG--ANRIYGI 160
Query 156 SYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISEASGAAPTHEAPAPPR 215
++S+ D + ++ AR A DAK RA+Q A+ +G +G+V+ I+E G+ P P R
Sbjct 161 NFSVADSNSVLSQARDNAIVDAKARAEQMARQAGASIGQVLVITEIVGSGPIVPMPMMER 220
Query 216 GLSA---VPLEPGQQTVGFSVTVVWEL 239
A VP++ G+Q+ V V +EL
Sbjct 221 ANGAGSPVPVQAGEQSYTAQVQVTYEL 247
>gi|326383225|ref|ZP_08204913.1| hypothetical protein SCNU_09824 [Gordonia neofelifaecis NRRL
B-59395]
gi|326197975|gb|EGD55161.1| hypothetical protein SCNU_09824 [Gordonia neofelifaecis NRRL
B-59395]
Length=205
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/211 (41%), Positives = 122/211 (58%), Gaps = 14/211 (6%)
Query 34 DPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAVIDALVGAGLDRKD 93
D R V+V GSG+V VPD + +G+ V ADV++AM++ +AVI A+V AG+ R D
Sbjct 3 DVRTVSVDGSGRVSAVPDVVRVQIGVAVADADVSTAMDRAGVSMRAVIAAVVDAGVARTD 62
Query 94 IRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLALVVSTGGDATRIS 153
+ T++++V PQY + G ITGY N + + DAA +L+ GGD R+
Sbjct 63 LATSQLSVQPQYRRGDDPG---ITGYEVSNMLTATVRELDAAGSVLSAAAGAGGDDLRVH 119
Query 154 SVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISEASGAAPTHEAPAP 213
+S S+ D S + AR AF DA++RA+QYA+L+G LG+ +SISE GA T P
Sbjct 120 GLSLSVADPSGALTAARDAAFADARDRAEQYARLAGASLGRGLSISE--GAPSTSPVPR- 176
Query 214 PRGLSAV-----PLEPGQQTVGFSVTVVWEL 239
L+A P+E G+Q SV VV+EL
Sbjct 177 ---LAAFAGGEPPIEAGEQQFSASVAVVFEL 204
>gi|328886507|emb|CCA59746.1| conserved hypothetical protein [Streptomyces venezuelae ATCC
10712]
Length=256
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/211 (35%), Positives = 110/211 (53%), Gaps = 12/211 (5%)
Query 35 PRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDI 94
P VTV G G+ PD I VG++ + AM N +A++ L G+ +DI
Sbjct 51 PATVTVTGHGRASAAPDLAILSVGVEASRPTAKEAMAAQNTAAEALLAVLHKQGIADRDI 110
Query 95 RTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLALVVSTGGDATRISS 154
RT ++++P Y+ G +TGY+A VKI D +++ V T GDA R++
Sbjct 111 RTDSLSLSPVYTQ-NAQGENKVTGYQAGQSFSVKIRDIDRTGQVIGAVNDTTGDAGRVNG 169
Query 155 VSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISEAS------GAAPTH 208
V + + D S L AR A++DA +A Q+A+LSG LG+++S+SE GAAP
Sbjct 170 VVFDVADPSALRVKAREAAYKDAYEKAAQHARLSGHELGRLVSLSEGESVRPGPGAAPGI 229
Query 209 EAPAPPRGLSAVPLEPGQQTVGFSVTVVWEL 239
A P +VPL PG+ +V+ V+EL
Sbjct 230 AADEP-----SVPLAPGEIEEQVTVSAVFEL 255
>gi|146337527|ref|YP_001202575.1| hypothetical protein BRADO0381 [Bradyrhizobium sp. ORS 278]
gi|146190333|emb|CAL74329.1| conserved hypothetical protein; putative secreted protein [Bradyrhizobium
sp. ORS 278]
Length=237
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/205 (32%), Positives = 111/205 (55%), Gaps = 6/205 (2%)
Query 38 VTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTT 97
+TV G G VQ PD D G+ A A N V+ +L AG+ KD++T+
Sbjct 32 ITVSGEGSVQAPPDLAQIDAGVASDAKTAREAAEANNVAMAKVLQSLKTAGIADKDVQTS 91
Query 98 RVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSY 157
R+++ PQY+ P G +TGYRA N + +K+H + ++ VV+ G A + +V +
Sbjct 92 RLSLQPQYAQNRP-GQPAVTGYRASNRVTIKVHDIAKVANVIDTVVAAG--ANDVGNVFF 148
Query 158 SIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISEASGAAPTHEAP---APP 214
S+ + S+L+ AR +A DA+ +A+ YA+ +G+ LG+ ++I+E P A AP
Sbjct 149 SVAEPSKLLDQAREKAVADARRKAEIYAKAAGVTLGQPLNIAEDGAPTPVFRAKTFAAPM 208
Query 215 RGLSAVPLEPGQQTVGFSVTVVWEL 239
+ P+ G++T+ +V+V W +
Sbjct 209 AAGAPTPVAQGEETLSVTVSVTWAI 233
>gi|148251978|ref|YP_001236563.1| hypothetical protein BBta_0370 [Bradyrhizobium sp. BTAi1]
gi|146404151|gb|ABQ32657.1| putative exported protein of unknown function [Bradyrhizobium
sp. BTAi1]
Length=236
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/204 (33%), Positives = 108/204 (53%), Gaps = 5/204 (2%)
Query 38 VTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTT 97
+TV G V PD D G+ A A N V+ AL AGL KD++T+
Sbjct 32 ITVSGEASVSAPPDLAQIDAGVASDAKTAREAAEANNAAMAKVLQALKTAGLADKDVQTS 91
Query 98 RVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSY 157
R+++ PQY+ P G +TGYRA N + +K+ + ++ VV G A + +V +
Sbjct 92 RLSLQPQYAPNRP-GQTQVTGYRASNRVTIKLREVGKVASVIDTVVGAG--ANDVGNVYF 148
Query 158 SIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISEASGAAPTHEAP--APPR 215
++ + S+L+ DAR +A DA+ +A+ YA+ +G+ LGK +SISE +AP A P
Sbjct 149 TVAEPSKLLDDAREKAVADARRKAEIYAKAAGVTLGKPLSISEDGASAPVFRAKNFGAPM 208
Query 216 GLSAVPLEPGQQTVGFSVTVVWEL 239
+ P+ G++T+ +V V W +
Sbjct 209 AATPTPVAQGEETLSITVNVTWAI 232
>gi|90421741|ref|YP_530111.1| hypothetical protein RPC_0217 [Rhodopseudomonas palustris BisB18]
gi|90103755|gb|ABD85792.1| protein of unknown function DUF541 [Rhodopseudomonas palustris
BisB18]
Length=237
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/210 (33%), Positives = 116/210 (56%), Gaps = 12/210 (5%)
Query 35 PRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDI 94
P V+V G V PD D G+ A A + N V+ AL GAGL+ KD+
Sbjct 30 PPAVSVTGEASVSVPPDLASVDGGVTTEAKTAREASDANNVAMGKVLLALKGAGLEDKDL 89
Query 95 RTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLALVVSTGGDATRISS 154
+T+R+++ PQY+N G + GYRA N I +++ + ++ +VS+G A +
Sbjct 90 QTSRLSLQPQYANQNRPGPNVVVGYRATNRITIRLRDVSKVASVIDTLVSSG--ANEVGG 147
Query 155 VSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISEASGAAPTHEAPAPP 214
+ +++ S+L+ +AR +AF DA+ +A+ YA+ +G+ LG +SISE S AP P P
Sbjct 148 IDFAVAAASKLLDEARDQAFADARRKAEIYARAAGVALGAPLSISEDS--AP---GPMPM 202
Query 215 RGL-----SAVPLEPGQQTVGFSVTVVWEL 239
R + ++ P+ PG++T+ SV+V + +
Sbjct 203 RKMMLDRAASAPVAPGEETLRVSVSVSFAI 232
>gi|307944292|ref|ZP_07659633.1| 26 kDa periplasmic immunogenic protein [Roseibium sp. TrichSKD4]
gi|307772638|gb|EFO31858.1| 26 kDa periplasmic immunogenic protein [Roseibium sp. TrichSKD4]
Length=260
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/214 (31%), Positives = 110/214 (52%), Gaps = 19/214 (8%)
Query 37 QVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRT 96
+T+ G G++ PD + + A++ + +AVID + AG++ KDI+T
Sbjct 52 HITISGEGKISVAPDMAVITTQVVSPGDTAPEALSANSKAMKAVIDEIKSAGIEAKDIKT 111
Query 97 TRVTVAPQYSNPEPAGTA--TITGYRADNDIEVKIHPTDAASRLLALVVSTGGDATRISS 154
+ ++ P+Y + + A I GY N + V + D LL+ VV +G A +I
Sbjct 112 SGFSIYPRYDHSKRAQNKAPKIVGYDVRNGVTVNVRDLDRLGDLLSTVVESG--ANQIGG 169
Query 155 VSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISEASGAAPTHEAPAPP 214
+S+ + D + +AR +A ++A+ +A+ YA+ +G RLG+V+ ISE P P
Sbjct 170 ISFQVSDPESKMDEARKKAVENARKKAEIYAEAAGSRLGEVLQISENGSYTPA------P 223
Query 215 RGL---------SAVPLEPGQQTVGFSVTVVWEL 239
RGL +VP+E G+ T+ SVT+ WEL
Sbjct 224 RGLRMEAMAMAADSVPVEAGENTLQASVTIKWEL 257
>gi|300088000|ref|YP_003758522.1| hypothetical protein Dehly_0899 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527733|gb|ADJ26201.1| protein of unknown function DUF541 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length=244
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/237 (34%), Positives = 124/237 (53%), Gaps = 14/237 (5%)
Query 8 SIALVAAGLAA--ALSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQVTAAD 65
++ + A+G A A+SG DS SG + V G+G+V PDT +G+QV A
Sbjct 16 TVGIFASGCAGTTAVSG-DSQQSG--------IWVSGNGKVSVTPDTANLSLGVQVEAVG 66
Query 66 VTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSNPEPAGTATITGYRADNDI 125
+ A Q D AVI+AL G+ KDI T+ ++P Y + G I GY+ N +
Sbjct 67 LAEANQQAADVMDAVIEALKDNGIAEKDITTSGFNISPVYEYDKETGRNYIRGYQVSNTV 126
Query 126 EVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAKNRADQYA 185
+K+ + ++ V+ GGDA R+S++ +SI D S DAR A DAK +A+Q A
Sbjct 127 NLKVREIENTGAVIDAAVAAGGDAVRVSNIYFSIDDLSPAQDDARELALLDAKAKAEQIA 186
Query 186 QLSGLRLGKVISISEASGAAPTHEAPA---PPRGLSAVPLEPGQQTVGFSVTVVWEL 239
+++G+ LGKV ++E S EAP + S P+ PG+ V +V V++ +
Sbjct 187 RVTGVSLGKVTYVAETSSGGARVEAPGMVNDGKEGSVTPVLPGETDVVVTVQVIYSI 243
>gi|284033800|ref|YP_003383731.1| hypothetical protein Kfla_5928 [Kribbella flavida DSM 17836]
gi|283813093|gb|ADB34932.1| protein of unknown function DUF541 [Kribbella flavida DSM 17836]
Length=216
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/206 (34%), Positives = 108/206 (53%), Gaps = 8/206 (3%)
Query 38 VTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTT 97
+TV G+GQ D L + + A+DV A+ Q +R +AV AL G G+ DI T+
Sbjct 16 ITVTGTGQATAPADLLRLTLSVGQDASDVAIAVAQVAERTEAVTAALHGEGVAAADIYTS 75
Query 98 RVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSY 157
V+V PQY + + + GYRA + + V RLL V+ G++ + + +
Sbjct 76 AVSVHPQYGD-----SMAVAGYRASHSMTVTTRDLTGFGRLLNAAVAAAGNSLGLDFLQF 130
Query 158 SIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISEASGAAPTH--EAPAPPR 215
+ D + LV AR AFQ A+ +ADQ A L+G +G + +++E GA P +A +
Sbjct 131 DVSDKAVLVDQARELAFQQARQKADQLAALTGQSIGSIAAVAETQGAVPLRAMKAESARG 190
Query 216 GLSA-VPLEPGQQTVGFSVTVVWELT 240
G +A + + PG+QTV SV V W +
Sbjct 191 GFAADLAVTPGEQTVDVSVEVRWNWS 216
>gi|73748881|ref|YP_308120.1| putative periplasmic protein [Dehalococcoides sp. CBDB1]
gi|147669642|ref|YP_001214460.1| hypothetical protein DehaBAV1_1002 [Dehalococcoides sp. BAV1]
gi|289432877|ref|YP_003462750.1| hypothetical protein DehalGT_0933 [Dehalococcoides sp. GT]
gi|73660597|emb|CAI83204.1| hypothetical periplasmic protein [Dehalococcoides sp. CBDB1]
gi|146270590|gb|ABQ17582.1| protein of unknown function DUF541 [Dehalococcoides sp. BAV1]
gi|288946597|gb|ADC74294.1| protein of unknown function DUF541 [Dehalococcoides sp. GT]
Length=254
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/245 (32%), Positives = 123/245 (51%), Gaps = 20/245 (8%)
Query 11 LVAAGLAAALSGC------DSHNSGSLGADPRQ----VTVFGSGQVQGVPDTLIADVGIQ 60
L+ LA ++GC ++ N+ S G Q + V GSG+V PD I +G++
Sbjct 13 LLVVSLAGGIAGCASGTTDETDNTDSPGVIWSQQNTGIWVNGSGEVTVSPDVAILTLGVE 72
Query 61 VTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAP--QYSNPEPAGTATITG 118
+ +A Q A+I++L G+ KDI+T+ + P ++++ +TI G
Sbjct 73 SMGVSIDAAQTQAAQAMNAIINSLKANGVLDKDIKTSSYYIYPVTEWTDNR----STIVG 128
Query 119 YRADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAK 178
YR N EVKI +L V GGD +R++ + +SI D + + ARA A QDAK
Sbjct 129 YRVSNQAEVKIRQIAQTGSILDAAVRAGGDDSRVNGLYFSIDDPAAAYEQARALAIQDAK 188
Query 179 NRADQYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGLSAV----PLEPGQQTVGFSVT 234
+A+Q A ++G+ LGK+I ISE S P + S+V P+ G+ TV SV
Sbjct 189 AKAEQMASVAGVGLGKLIYISETSNYIPRWDYAKDAGMASSVPEVTPISSGETTVTVSVQ 248
Query 235 VVWEL 239
V+ +
Sbjct 249 AVYSI 253
>gi|75676962|ref|YP_319383.1| hypothetical protein Nwi_2778 [Nitrobacter winogradskyi Nb-255]
gi|74421832|gb|ABA06031.1| Protein of unknown function DUF541 [Nitrobacter winogradskyi
Nb-255]
Length=240
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/205 (31%), Positives = 109/205 (54%), Gaps = 2/205 (0%)
Query 35 PRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDI 94
P ++V G + PD + G+ A A N V+ AL AG+ KD
Sbjct 34 PPMISVTGEATISTPPDLAQIEAGVTTDAKTAREASEANNAAMSKVLAALKSAGIPEKDF 93
Query 95 RTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLALVVSTGGDATRISS 154
+T+R+++ PQY+NP + + ++GYRA N + VK+ + ++ V + G A I
Sbjct 94 QTSRLSLQPQYTNPNRSSPSVLSGYRATNRVAVKLRDISKLAGVIDTVTAAG--ANDIGG 151
Query 155 VSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISEASGAAPTHEAPAPP 214
+++++ + S+L+ DARA A DA+ +A+ YA+ +G+ LG +SISE +AP A
Sbjct 152 INFAVSNASKLLDDARAEAVADARRKAEIYAKAAGVSLGAPLSISEHGSSAPVMYRRAAM 211
Query 215 RGLSAVPLEPGQQTVGFSVTVVWEL 239
+ + PG++T+ +V + WE+
Sbjct 212 PMAAEAAIAPGEETLRVTVGISWEI 236
>gi|85714452|ref|ZP_01045440.1| hypothetical protein NB311A_15912 [Nitrobacter sp. Nb-311A]
gi|85698899|gb|EAQ36768.1| hypothetical protein NB311A_15912 [Nitrobacter sp. Nb-311A]
Length=238
Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/207 (31%), Positives = 106/207 (52%), Gaps = 2/207 (0%)
Query 33 ADPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAVIDALVGAGLDRK 92
A P ++V G + PD + G+ A A N V+ AL AG+ K
Sbjct 30 APPPTISVTGEATISAPPDLAEIEAGVTTDAKTAREASEANNAAMSKVLAALKSAGIAEK 89
Query 93 DIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLALVVSTGGDATRI 152
D +T+R+++ PQY+N +G + ++GYRA N I VK+ D A + T A I
Sbjct 90 DYQTSRLSLQPQYTNQNRSGPSVLSGYRATNRITVKLR--DIAKMAGVIDAVTAAGANDI 147
Query 153 SSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISEASGAAPTHEAPA 212
+++++ + S+L+ ARA A DA+ +A+ YA+ +G+ LG +SI+E A P A
Sbjct 148 GGINFTVSNASKLLDHARAEAIADARRKAEIYAKAAGVSLGAPVSIAEHGSAVPVLYRRA 207
Query 213 PPRGLSAVPLEPGQQTVGFSVTVVWEL 239
+ + PG++T+ +V V WE+
Sbjct 208 AAPMAAEAAIAPGEETLRVTVGVSWEI 234
>gi|115522351|ref|YP_779262.1| hypothetical protein RPE_0323 [Rhodopseudomonas palustris BisA53]
gi|115516298|gb|ABJ04282.1| protein of unknown function DUF541 [Rhodopseudomonas palustris
BisA53]
Length=236
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/208 (32%), Positives = 108/208 (52%), Gaps = 3/208 (1%)
Query 33 ADPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAVIDALVGAGLDRK 92
A P ++V G V PD D G+ A A N V+ AL AG++ K
Sbjct 27 APPPAISVTGEASVSVPPDLATVDGGVSSDAKTAREAAEANNAAMTKVLAALKAAGIEDK 86
Query 93 DIRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLALVVSTGGDATRI 152
D++T+R+++ PQY+N G T+TGYRA N + V++ + ++ +V G A I
Sbjct 87 DLQTSRLSLLPQYANSNRPGPNTLTGYRASNRVTVRLRDVSKMASVVDTLV--GAGANEI 144
Query 153 SSVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISEASGAAPTHEAPA 212
+++++ S+L+ DAR +A DA+ +A+ YA+ G+ LG + ISE S P
Sbjct 145 GGINFTVAAASKLLDDAREKAIADARRKAEIYARAVGVTLGAPLGISEESTPGPMPYYRK 204
Query 213 PPRGLSA-VPLEPGQQTVGFSVTVVWEL 239
L+A P+ G++T+ +V+V W +
Sbjct 205 TTASLAASAPVAQGEETLSITVSVSWAI 232
>gi|338972647|ref|ZP_08628019.1| protein of unknown function DUF541 [Bradyrhizobiaceae bacterium
SG-6C]
gi|338234196|gb|EGP09314.1| protein of unknown function DUF541 [Bradyrhizobiaceae bacterium
SG-6C]
Length=231
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/209 (34%), Positives = 108/209 (52%), Gaps = 15/209 (7%)
Query 38 VTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTT 97
V+V G + PD D G+ A A N V+ AL +GL KDI+T+
Sbjct 28 VSVTGEASISVPPDVAQIDSGVTTEAKTAREASEANNKAMAGVLQALKNSGLAEKDIQTS 87
Query 98 RVTVAPQYSNP--EPAGTATITGYRADNDIEVKIHPTDAASRLLALVVSTGGDATRISSV 155
R++++PQ S P P ITGYRA N + V I + + ++V G A IS +
Sbjct 88 RLSLSPQ-SVPGRNPNAPFQITGYRASNRVTVTIRDITKVADTIDVLV--GAGANEISGI 144
Query 156 SYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISEASGAAPTHEAPAPPR 215
S+++ S+L+ DARA A DA+ +A+ YA+ + + LG +SISE T P P R
Sbjct 145 SFAVSKASKLLDDARAEAMADARRKAEIYAKAANITLGAPVSISEE-----TAPGPVPYR 199
Query 216 GL-----SAVPLEPGQQTVGFSVTVVWEL 239
+ ++ P+ G++T+ SV+V +EL
Sbjct 200 KMAGAMAASAPVAQGEETLRVSVSVSYEL 228
>gi|56696313|ref|YP_166670.1| outer membrane protein, 28Kda [Ruegeria pomeroyi DSS-3]
gi|56678050|gb|AAV94716.1| outer membrane protein, 28Kda [Ruegeria pomeroyi DSS-3]
Length=232
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/247 (32%), Positives = 131/247 (54%), Gaps = 29/247 (11%)
Query 5 VRHSIALVAAGLAAA--LSGCDSHNSGSLGADPRQVTVFGSGQVQGVPDTLIADVGIQVT 62
+R I LVAA L AA L+ D P +TV GSG ++ VPD + +G+
Sbjct 1 MRILIFLVAALLFAAVGLARADEQ--------PGHITVTGSGTIETVPDMAVITLGVTHE 52
Query 63 AADVTSAMNQTNDRQQAVIDALVGAGLDRKDIRTTRVTVAPQYSN----PEPAGTATITG 118
+ + +A+ T++ Q + D L G+D +D++T ++++P +SN EP ITG
Sbjct 53 SQEARAALLATSEAVQQIFDRLGEMGVDVRDMQTNDLSLSPLWSNRASSSEP---PKITG 109
Query 119 YRADNDIEVKIHPTDAASRLLALVVSTGGDATRISSVSYSIGDDSQLVKDARARAFQDAK 178
++A N + V++ A +L VVS G A + + + + + L ARA+A DA+
Sbjct 110 FQASNRVTVRVRDLAALGGILDAVVSDG--ANTFNGLEFGVKEPKPLRDLARAKAVADAQ 167
Query 179 NRADQYAQLSGLRLGKVISISEASGAAPTHEAPAPPRGLSA------VPLEPGQQTVGFS 232
+RA Q A+ +G++LG+V+SISE P P P ++A VP+ G+ + S
Sbjct 168 DRARQLAEAAGVKLGRVVSISE----LPHDPQPRPMMRMAAMAESMDVPVAGGEIGLSGS 223
Query 233 VTVVWEL 239
VT+V+E+
Sbjct 224 VTMVFEI 230
>gi|209883423|ref|YP_002287280.1| outer membrane protein [Oligotropha carboxidovorans OM5]
gi|337739495|ref|YP_004631223.1| periplasmic immunogenic protein [Oligotropha carboxidovorans
OM5]
gi|209871619|gb|ACI91415.1| outer membrane protein [Oligotropha carboxidovorans OM5]
gi|336093581|gb|AEI01407.1| periplasmic immunogenic protein [Oligotropha carboxidovorans
OM4]
gi|336097159|gb|AEI04982.1| periplasmic immunogenic protein [Oligotropha carboxidovorans
OM5]
Length=231
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/208 (31%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query 34 DPRQVTVFGSGQVQGVPDTLIADVGIQVTAADVTSAMNQTNDRQQAVIDALVGAGLDRKD 93
+P ++V G V PD + G+ A +A AV+ AL +G+ KD
Sbjct 21 EPPTISVSGQASVSAAPDMAEIEAGVTSEAKTARAASEANAKAMNAVLTALKASGIAEKD 80
Query 94 IRTTRVTVAPQYSNPEPAGTATITGYRADNDIEVKIHPTDAASRLLALVVSTGGDATRIS 153
+T++ ++ P+ ++ P A ITGYRA N + VK+ + +V G A I
Sbjct 81 FQTSQASLHPEMTSRTPTTRAQITGYRATNRVSVKLRDIAKIGSTIDALVEAG--ANDIG 138
Query 154 SVSYSIGDDSQLVKDARARAFQDAKNRADQYAQLSGLRLGKVISISEASGAAPTHEAPAP 213
+++S+ S+L+ +ARA+A +DA +A YA+ +G+ LG I+ISE P
Sbjct 139 GINFSVSQSSKLLDEARAKAIEDAHRKASIYAKAAGVTLGAPIAISEEGAPPPIAYRRVQ 198
Query 214 PRGLSA--VPLEPGQQTVGFSVTVVWEL 239
L A P+ PG+QT+ SV V +E+
Sbjct 199 RAALDAAPTPIAPGEQTLRVSVHVSYEI 226
Lambda K H
0.314 0.129 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 332206503090
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40