BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3632 Length=114 Score E Sequences producing significant alignments: (Bits) Value gi|15610768|ref|NP_218149.1| hypothetical protein Rv3632 [Mycoba... 228 3e-58 gi|342862022|ref|ZP_08718666.1| hypothetical protein MCOL_24145 ... 196 1e-48 gi|118619382|ref|YP_907714.1| hypothetical protein MUL_4209 [Myc... 188 2e-46 gi|296166696|ref|ZP_06849121.1| conserved hypothetical protein [... 186 7e-46 gi|15827012|ref|NP_301275.1| hypothetical protein ML0208 [Mycoba... 184 3e-45 gi|240173326|ref|ZP_04751984.1| hypothetical protein MkanA1_2869... 182 1e-44 gi|254819877|ref|ZP_05224878.1| hypothetical protein MintA_08129... 180 5e-44 gi|41406529|ref|NP_959365.1| hypothetical protein MAP0431c [Myco... 177 4e-43 gi|333992557|ref|YP_004525171.1| hypothetical protein JDM601_391... 155 2e-36 gi|169627608|ref|YP_001701257.1| hypothetical protein MAB_0504c ... 142 2e-32 gi|336326540|ref|YP_004606506.1| hypothetical protein CRES_1989 ... 139 1e-31 gi|213966026|ref|ZP_03394215.1| conserved hypothetical protein [... 137 5e-31 gi|19551574|ref|NP_599576.1| hypothetical protein NCgl0318 [Cory... 129 1e-28 gi|344045245|gb|EGV40917.1| hypothetical protein CgS9114_04827 [... 129 2e-28 gi|227487228|ref|ZP_03917544.1| conserved hypothetical protein [... 128 3e-28 gi|259506045|ref|ZP_05748947.1| membrane protein [Corynebacteriu... 128 3e-28 gi|300779963|ref|ZP_07089819.1| conserved hypothetical protein [... 127 4e-28 gi|145294453|ref|YP_001137274.1| hypothetical protein cgR_0408 [... 125 2e-27 gi|334564651|ref|ZP_08517642.1| hypothetical protein CbovD2_0875... 125 2e-27 gi|227549706|ref|ZP_03979755.1| conserved hypothetical protein [... 124 3e-27 gi|225020232|ref|ZP_03709424.1| hypothetical protein CORMATOL_00... 124 6e-27 gi|319949537|ref|ZP_08023586.1| hypothetical protein ES5_08801 [... 122 2e-26 gi|343924252|ref|ZP_08763812.1| hypothetical protein GOALK_005_0... 119 2e-25 gi|317509481|ref|ZP_07967097.1| hypothetical protein HMPREF9336_... 106 1e-21 gi|256397273|ref|YP_003118837.1| hypothetical protein Caci_8173 ... 102 2e-20 gi|262200614|ref|YP_003271822.1| hypothetical protein Gbro_0601 ... 102 3e-20 gi|296392556|ref|YP_003657440.1| hypothetical protein Srot_0118 ... 101 3e-20 gi|325002126|ref|ZP_08123238.1| hypothetical protein PseP1_25341... 89.0 2e-16 gi|311896575|dbj|BAJ28983.1| hypothetical protein KSE_31730 [Kit... 84.7 4e-15 gi|256390198|ref|YP_003111762.1| hypothetical protein Caci_0993 ... 69.7 1e-10 gi|88855642|ref|ZP_01130305.1| hypothetical protein A20C1_06076 ... 67.4 6e-10 gi|227497936|ref|ZP_03928116.1| conserved hypothetical protein [... 66.2 2e-09 gi|317124411|ref|YP_004098523.1| hypothetical protein Intca_1278... 63.9 8e-09 gi|152967841|ref|YP_001363625.1| hypothetical protein Krad_3898 ... 63.2 1e-08 gi|269957376|ref|YP_003327165.1| hypothetical protein Xcel_2593 ... 63.2 1e-08 gi|91975238|ref|YP_567897.1| hypothetical protein RPD_0758 [Rhod... 58.2 4e-07 gi|320532373|ref|ZP_08033217.1| hypothetical protein HMPREF9057_... 58.2 5e-07 gi|326772105|ref|ZP_08231390.1| membrane protein [Actinomyces vi... 58.2 5e-07 gi|325067593|ref|ZP_08126266.1| hypothetical protein AoriK_07224... 57.8 5e-07 gi|329944251|ref|ZP_08292510.1| hypothetical protein HMPREF9056_... 57.0 1e-06 gi|184200549|ref|YP_001854756.1| hypothetical protein KRH_09030 ... 53.1 1e-05 gi|269794189|ref|YP_003313644.1| hypothetical protein Sked_08590... 49.3 2e-04 gi|227494945|ref|ZP_03925261.1| conserved hypothetical protein [... 49.3 2e-04 gi|320094286|ref|ZP_08026078.1| hypothetical protein HMPREF9005_... 48.9 2e-04 gi|297570683|ref|YP_003696457.1| hypothetical protein Arch_0073 ... 48.9 2e-04 gi|87309021|ref|ZP_01091159.1| hypothetical protein DSM3645_1972... 45.8 0.002 gi|257069233|ref|YP_003155488.1| hypothetical protein Bfae_20910... 43.1 0.015 gi|315606098|ref|ZP_07881129.1| conserved hypothetical protein [... 42.0 0.030 gi|116623724|ref|YP_825880.1| hypothetical protein Acid_4636 [Ca... 41.2 0.047 gi|148643684|ref|YP_001274197.1| hypothetical protein Msm_1624 [... 39.7 0.17 >gi|15610768|ref|NP_218149.1| hypothetical protein Rv3632 [Mycobacterium tuberculosis H37Rv] gi|15843244|ref|NP_338281.1| hypothetical protein MT3734 [Mycobacterium tuberculosis CDC1551] gi|31794802|ref|NP_857295.1| hypothetical protein Mb3656 [Mycobacterium bovis AF2122/97] 80 more sequence titles Length=114 Score = 228 bits (580), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 114/114 (100%), Positives = 114/114 (100%), Gaps = 0/114 (0%) Query 1 MNWIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWF 60 MNWIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWF Sbjct 1 MNWIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWF 60 Query 61 GVRRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPEQCR 114 GVRRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPEQCR Sbjct 61 GVRRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPEQCR 114 >gi|342862022|ref|ZP_08718666.1| hypothetical protein MCOL_24145 [Mycobacterium colombiense CECT 3035] gi|342130562|gb|EGT83871.1| hypothetical protein MCOL_24145 [Mycobacterium colombiense CECT 3035] Length=113 Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 94/111 (85%), Positives = 106/111 (96%), Gaps = 0/111 (0%) Query 1 MNWIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWF 60 MNWIQVLLI +I+ LL YLLRSRR++RS+AWVKVGYV+FVLAGIYAVLRPDDTTVVA+WF Sbjct 1 MNWIQVLLIGAIVALLVYLLRSRRNSRSKAWVKVGYVVFVLAGIYAVLRPDDTTVVAHWF 60 Query 61 GVRRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPE 111 GVRRGTDLMLYAL+MAF FTTLSTYMRFKDLELRYAR+ARA+A++ AQAPE Sbjct 61 GVRRGTDLMLYALIMAFCFTTLSTYMRFKDLELRYARLARAVAMDSAQAPE 111 >gi|118619382|ref|YP_907714.1| hypothetical protein MUL_4209 [Mycobacterium ulcerans Agy99] gi|183985100|ref|YP_001853391.1| hypothetical protein MMAR_5132 [Mycobacterium marinum M] gi|118571492|gb|ABL06243.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] gi|183178426|gb|ACC43536.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=113 Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 104/111 (94%), Positives = 108/111 (98%), Gaps = 0/111 (0%) Query 1 MNWIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWF 60 MNWIQVLLI SII LLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVA+WF Sbjct 1 MNWIQVLLIGSIIALLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVAHWF 60 Query 61 GVRRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPE 111 GVRRGTDLMLYAL+MAFSFTTLSTYMRFKDLELRYAR+ARA+ALEGAQ PE Sbjct 61 GVRRGTDLMLYALIMAFSFTTLSTYMRFKDLELRYARLARAIALEGAQTPE 111 >gi|296166696|ref|ZP_06849121.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897961|gb|EFG77542.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=116 Score = 186 bits (473), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 102/112 (92%), Positives = 108/112 (97%), Gaps = 0/112 (0%) Query 1 MNWIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWF 60 MNWIQVLLI SI+ LLFYLLRSRR+ARSRAWVKVGYV+FVLAGIYAVLRPDDTTVVA+WF Sbjct 1 MNWIQVLLIGSIVALLFYLLRSRRNARSRAWVKVGYVVFVLAGIYAVLRPDDTTVVAHWF 60 Query 61 GVRRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPEQ 112 GVRRGTDLMLYAL+MAF FTTLSTYMRFKDLELRYAR+ARALALEGAQAP Q Sbjct 61 GVRRGTDLMLYALIMAFCFTTLSTYMRFKDLELRYARLARALALEGAQAPGQ 112 >gi|15827012|ref|NP_301275.1| hypothetical protein ML0208 [Mycobacterium leprae TN] gi|221229490|ref|YP_002502906.1| hypothetical protein MLBr_00208 [Mycobacterium leprae Br4923] gi|3097234|emb|CAA18810.1| hypothetical protein MLCB2548.23c [Mycobacterium leprae] gi|13092559|emb|CAC29716.1| putative membrane protein [Mycobacterium leprae] gi|219932597|emb|CAR70301.1| putative membrane protein [Mycobacterium leprae Br4923] Length=113 Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 91/112 (82%), Positives = 101/112 (91%), Gaps = 0/112 (0%) Query 1 MNWIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWF 60 MNWIQVLLI SII LL YLLRSRR+ RSRAWVKVGY+ FVL G+YAVLRP+DTTVVA+WF Sbjct 1 MNWIQVLLIGSIIVLLIYLLRSRRNVRSRAWVKVGYIAFVLGGVYAVLRPNDTTVVAHWF 60 Query 61 GVRRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPEQ 112 GV RGTDLMLYAL+MAFSFTTLS Y+RFKDLELRYA +AR +ALEGA+APE Sbjct 61 GVCRGTDLMLYALIMAFSFTTLSIYIRFKDLELRYACLARVVALEGARAPEP 112 >gi|240173326|ref|ZP_04751984.1| hypothetical protein MkanA1_28696 [Mycobacterium kansasii ATCC 12478] Length=112 Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 100/111 (91%), Positives = 107/111 (97%), Gaps = 0/111 (0%) Query 1 MNWIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWF 60 MNWIQVLLI SI+ LL YLLRSRRSARSRAWVKVGYVLFVL G+YAVLRPDDTTVVA+WF Sbjct 1 MNWIQVLLIGSIVVLLVYLLRSRRSARSRAWVKVGYVLFVLGGVYAVLRPDDTTVVAHWF 60 Query 61 GVRRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPE 111 GVRRGTDLMLYAL+MAFSFTTLSTYMRFKDLELRYAR+ARA+ALEGAQAP+ Sbjct 61 GVRRGTDLMLYALIMAFSFTTLSTYMRFKDLELRYARLARAVALEGAQAPQ 111 >gi|254819877|ref|ZP_05224878.1| hypothetical protein MintA_08129 [Mycobacterium intracellulare ATCC 13950] Length=113 Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 99/111 (90%), Positives = 105/111 (95%), Gaps = 0/111 (0%) Query 1 MNWIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWF 60 MNWIQVLLI SI+ LL YLLRSRR+ARSRAWVKVGYV+FVLAGIYAVLRPDDTTVVA WF Sbjct 1 MNWIQVLLIGSIVALLVYLLRSRRNARSRAWVKVGYVVFVLAGIYAVLRPDDTTVVAQWF 60 Query 61 GVRRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPE 111 GVRRGTDLMLYALVMAF FTTLSTYMRFKDLELRYAR+ARA+AL+ AQAPE Sbjct 61 GVRRGTDLMLYALVMAFCFTTLSTYMRFKDLELRYARLARAIALDSAQAPE 111 >gi|41406529|ref|NP_959365.1| hypothetical protein MAP0431c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118462924|ref|YP_879804.1| hypothetical protein MAV_0523 [Mycobacterium avium 104] gi|254773494|ref|ZP_05215010.1| hypothetical protein MaviaA2_02285 [Mycobacterium avium subsp. avium ATCC 25291] gi|41394878|gb|AAS02748.1| hypothetical protein MAP_0431c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118164211|gb|ABK65108.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336460945|gb|EGO39828.1| hypothetical protein (DUF2304) [Mycobacterium avium subsp. paratuberculosis S397] Length=113 Score = 177 bits (449), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 98/112 (88%), Positives = 104/112 (93%), Gaps = 0/112 (0%) Query 1 MNWIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWF 60 MNWIQVLLI SI+ LL YLLRSRR+ARSRAWVKVGYV+FVLAGIYAVLRPDDTTVVANWF Sbjct 1 MNWIQVLLIGSIVALLVYLLRSRRNARSRAWVKVGYVVFVLAGIYAVLRPDDTTVVANWF 60 Query 61 GVRRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPEQ 112 GVRRGTDLMLYALVMAF FTTLSTYMRFKDLELRYAR+ARA+ALE A P+ Sbjct 61 GVRRGTDLMLYALVMAFCFTTLSTYMRFKDLELRYARLARAVALESALPPDP 112 >gi|333992557|ref|YP_004525171.1| hypothetical protein JDM601_3917 [Mycobacterium sp. JDM601] gi|333488525|gb|AEF37917.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=144 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 86/111 (78%), Positives = 100/111 (91%), Gaps = 0/111 (0%) Query 1 MNWIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWF 60 MNWI+VLLIA+++ LL YLL SR SA+SRAWVK+GY+ FV+AGIYAVLRPDDTTVVANW Sbjct 1 MNWIKVLLIAAVLALLIYLLLSRGSAQSRAWVKIGYLGFVVAGIYAVLRPDDTTVVANWL 60 Query 61 GVRRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPE 111 GVRRGTDLMLY L+M F+FTTLSTYMRF+DLELRYAR+AR +AL AQ+PE Sbjct 61 GVRRGTDLMLYVLIMVFAFTTLSTYMRFRDLELRYARLARVVALAQAQSPE 111 >gi|169627608|ref|YP_001701257.1| hypothetical protein MAB_0504c [Mycobacterium abscessus ATCC 19977] gi|169239575|emb|CAM60603.1| Conserved hypothetical membrane protein [Mycobacterium abscessus] Length=132 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 73/111 (66%), Positives = 98/111 (89%), Gaps = 0/111 (0%) Query 1 MNWIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWF 60 + WIQ LLI +++ LL YLLRSR +A+++AWVK+G+V+FV+AGIYA+LRP+DTT +A+W Sbjct 2 ITWIQPLLIVAVLLLLVYLLRSRSTAQAKAWVKLGFVVFVVAGIYAILRPNDTTTLAHWL 61 Query 61 GVRRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPE 111 G+ RGTDLMLYAL++AF+FTTLSTY+RFKDLELRY+R+ RA+AL GA+ P Sbjct 62 GLGRGTDLMLYALIIAFAFTTLSTYLRFKDLELRYSRLTRAVALRGAEPPS 112 >gi|336326540|ref|YP_004606506.1| hypothetical protein CRES_1989 [Corynebacterium resistens DSM 45100] gi|336102522|gb|AEI10342.1| putative membrane protein [Corynebacterium resistens DSM 45100] Length=121 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 65/109 (60%), Positives = 89/109 (82%), Gaps = 0/109 (0%) Query 4 IQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVR 63 IQ+ L+ ++IGL Y L +RR AR++A VK+G+++FV A ++AVLRPDD TVVA W GV Sbjct 7 IQIFLLLAVIGLALYFLSNRRKARAKAGVKIGFIIFVFATVWAVLRPDDLTVVAQWVGVS 66 Query 64 RGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPEQ 112 RGTDL+LY LV+AF FTT+STY+RF++ ELRYAR+ARA+AL+ A P++ Sbjct 67 RGTDLLLYLLVVAFMFTTMSTYIRFREQELRYARLARAVALQNAVPPKE 115 >gi|213966026|ref|ZP_03394215.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] gi|213951321|gb|EEB62714.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] Length=140 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 62/109 (57%), Positives = 93/109 (86%), Gaps = 0/109 (0%) Query 4 IQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVR 63 +Q++L+ +++GL+ Y + +RR AR++A VK+G+V+FV+A ++A++RPDD TVVANW GV Sbjct 6 VQIILLLAMVGLVAYFVANRRKARAKAGVKLGFVVFVIACLWAIVRPDDLTVVANWIGVT 65 Query 64 RGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPEQ 112 RGTDL+LY LV+AF FTT+S+Y+RF++ ELRYAR+ARA+AL+ A PE+ Sbjct 66 RGTDLLLYVLVLAFVFTTVSSYIRFREQELRYARLARAVALKTAVRPEE 114 >gi|19551574|ref|NP_599576.1| hypothetical protein NCgl0318 [Corynebacterium glutamicum ATCC 13032] gi|62389222|ref|YP_224624.1| hypothetical protein cg0393 [Corynebacterium glutamicum ATCC 13032] gi|21323089|dbj|BAB97717.1| Hypothetical membrane protein [Corynebacterium glutamicum ATCC 13032] gi|41324555|emb|CAF18895.1| CONSERVED HYPOTHETICAL membrane PROTEIN [Corynebacterium glutamicum ATCC 13032] Length=125 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 59/97 (61%), Positives = 81/97 (84%), Gaps = 0/97 (0%) Query 18 YLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVRRGTDLMLYALVMAF 77 Y LR+RR AR++AWVK+G+V+F+ A ++AVLRPDD T +AN+ GV RGTDLMLYALV+AF Sbjct 24 YFLRNRRKARAKAWVKIGFVVFIFAAVWAVLRPDDLTQLANFVGVDRGTDLMLYALVVAF 83 Query 78 SFTTLSTYMRFKDLELRYARIARALALEGAQAPEQCR 114 FTTLS+Y+RF++ ELRY+++ARA+AL+ PE + Sbjct 84 MFTTLSSYVRFREQELRYSKLARAVALQNVVLPEDSQ 120 >gi|344045245|gb|EGV40917.1| hypothetical protein CgS9114_04827 [Corynebacterium glutamicum S9114] Length=125 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 58/97 (60%), Positives = 81/97 (84%), Gaps = 0/97 (0%) Query 18 YLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVRRGTDLMLYALVMAF 77 Y LR+RR AR++AWVK+G+V+F+ A ++AV+RPDD T +AN+ GV RGTDLMLYALV+AF Sbjct 24 YFLRNRRKARAKAWVKIGFVVFIFAAVWAVIRPDDLTQLANFVGVDRGTDLMLYALVVAF 83 Query 78 SFTTLSTYMRFKDLELRYARIARALALEGAQAPEQCR 114 FTTLS+Y+RF++ ELRY+++ARA+AL+ PE + Sbjct 84 MFTTLSSYVRFREQELRYSKLARAVALQNVVLPEDSQ 120 >gi|227487228|ref|ZP_03917544.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227541603|ref|ZP_03971652.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227092886|gb|EEI28198.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227182571|gb|EEI63543.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] Length=114 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 59/95 (63%), Positives = 79/95 (84%), Gaps = 0/95 (0%) Query 18 YLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVRRGTDLMLYALVMAF 77 + L +RR +R++A VK+G+VLFV+A ++A+LRPDD TVVANW GV RGTDLMLYALV+AF Sbjct 16 FFLSNRRKSRAKAGVKIGFVLFVIASVWAILRPDDLTVVANWVGVDRGTDLMLYALVIAF 75 Query 78 SFTTLSTYMRFKDLELRYARIARALALEGAQAPEQ 112 F T+S Y+RF++ ELRYAR+ARA+AL+ A P+ Sbjct 76 LFVTMSAYIRFREQELRYARLARAVALQNAVTPDD 110 >gi|259506045|ref|ZP_05748947.1| membrane protein [Corynebacterium efficiens YS-314] gi|259166333|gb|EEW50887.1| membrane protein [Corynebacterium efficiens YS-314] Length=122 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 64/110 (59%), Positives = 89/110 (81%), Gaps = 0/110 (0%) Query 4 IQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVR 63 IQVLL+ + GL Y L +RR AR++AWVK+G+++F++A ++AVLRP+D T VAN GV Sbjct 10 IQVLLLLATAGLALYFLSNRRKARAKAWVKIGFLMFIVAAVWAVLRPEDLTAVANLVGVG 69 Query 64 RGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPEQC 113 RGTDL+LY LV+AF FTTLS+Y+RF++LELRYA++ARA+AL+ PE+ Sbjct 70 RGTDLLLYVLVVAFIFTTLSSYVRFRELELRYAKLARAVALQNPVLPEES 119 >gi|300779963|ref|ZP_07089819.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] gi|300534073|gb|EFK55132.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] Length=131 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 58/107 (55%), Positives = 82/107 (77%), Gaps = 0/107 (0%) Query 4 IQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVR 63 IQ +L+ + + L Y R+ A ++AWVKVG+ L +A ++A+LRPDD T+VANW GV Sbjct 2 IQFILLIAAVVLAVYFFTQRKKAFAKAWVKVGFALLAIAAVWAILRPDDVTIVANWLGVD 61 Query 64 RGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAP 110 RGTDLMLY +++AF FTT+ST++RF++ ELRYAR+ARA+AL+ A P Sbjct 62 RGTDLMLYVMIIAFFFTTMSTWVRFREQELRYARLARAVALQNAVPP 108 >gi|145294453|ref|YP_001137274.1| hypothetical protein cgR_0408 [Corynebacterium glutamicum R] gi|140844373|dbj|BAF53372.1| hypothetical protein [Corynebacterium glutamicum R] Length=125 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 57/97 (59%), Positives = 80/97 (83%), Gaps = 0/97 (0%) Query 18 YLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVRRGTDLMLYALVMAF 77 Y LR+RR AR++AWVK+G+V+F+ A ++AV+RPDD T +AN+ GV RGTDLMLYALV+AF Sbjct 24 YFLRNRRKARAKAWVKIGFVVFIFAAVWAVIRPDDLTQLANFVGVDRGTDLMLYALVVAF 83 Query 78 SFTTLSTYMRFKDLELRYARIARALALEGAQAPEQCR 114 FTTLS+Y+RF++ ELR +++ARA+AL+ PE + Sbjct 84 MFTTLSSYVRFREQELRCSKLARAVALQNVVLPEDSQ 120 >gi|334564651|ref|ZP_08517642.1| hypothetical protein CbovD2_08752 [Corynebacterium bovis DSM 20582] Length=122 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/107 (61%), Positives = 86/107 (81%), Gaps = 0/107 (0%) Query 4 IQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVR 63 IQVLL+ ++ L + L +RR AR++A VK+G+V+FV+A ++AVLRPDD TV+A W GV Sbjct 7 IQVLLLLAMAALGLFFLSNRRKARAKAGVKIGFVVFVVASLWAVLRPDDLTVIAQWLGVT 66 Query 64 RGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAP 110 RGTDL+LY LV+AF FTTLSTY+RF++ ELRYAR+ARA+AL A P Sbjct 67 RGTDLLLYVLVIAFLFTTLSTYIRFREQELRYARLARAVALTNAVPP 113 >gi|227549706|ref|ZP_03979755.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] gi|227078202|gb|EEI16165.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] Length=120 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/108 (57%), Positives = 84/108 (78%), Gaps = 0/108 (0%) Query 4 IQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVR 63 IQVLL+A+ + + FY +R+ A ++AWVK+G+ ++A I+A+LRPDD TV+ANW GV Sbjct 2 IQVLLLAAALAVAFYFFTNRKKANAKAWVKIGFAALMVAAIWAILRPDDVTVLANWLGVD 61 Query 64 RGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPE 111 RGTDLMLY L+MAF FTT+S + RF++ ELRYAR+ARA+AL+ A P Sbjct 62 RGTDLMLYVLIMAFFFTTISAWTRFREQELRYARLARAIALQNAVVPS 109 >gi|225020232|ref|ZP_03709424.1| hypothetical protein CORMATOL_00235 [Corynebacterium matruchotii ATCC 33806] gi|305679699|ref|ZP_07402509.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] gi|224946976|gb|EEG28185.1| hypothetical protein CORMATOL_00235 [Corynebacterium matruchotii ATCC 33806] gi|305660319|gb|EFM49816.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] Length=117 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 61/95 (65%), Positives = 77/95 (82%), Gaps = 0/95 (0%) Query 18 YLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVRRGTDLMLYALVMAF 77 Y L +RR AR++A VK+G+VL VL I+AVLRPDD TVVA GV RGTDLMLY L+MAF Sbjct 19 YFLTNRRKARAKAGVKLGFVLLVLLAIWAVLRPDDVTVVAQAVGVARGTDLMLYVLIMAF 78 Query 78 SFTTLSTYMRFKDLELRYARIARALALEGAQAPEQ 112 FTTLST++RF++ ELRYA++ARA+AL+ A PE+ Sbjct 79 GFTTLSTWIRFREQELRYAQLARAIALQNAVRPEE 113 >gi|319949537|ref|ZP_08023586.1| hypothetical protein ES5_08801 [Dietzia cinnamea P4] gi|319436804|gb|EFV91875.1| hypothetical protein ES5_08801 [Dietzia cinnamea P4] Length=128 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 56/95 (59%), Positives = 78/95 (83%), Gaps = 0/95 (0%) Query 18 YLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVRRGTDLMLYALVMAF 77 + L +RR AR++A VK+G+VLFV+ +YAV+RPDD TV+AN GV+RGTDL+LYALVM F Sbjct 16 FFLANRRKARAKAGVKIGFVLFVVFMVYAVIRPDDLTVIANALGVQRGTDLVLYALVMGF 75 Query 78 SFTTLSTYMRFKDLELRYARIARALALEGAQAPEQ 112 +F T+STY+RF++ ELRY+R+AR +AL+ A P+ Sbjct 76 AFVTVSTYVRFREQELRYSRLARTIALQNAVRPDD 110 >gi|343924252|ref|ZP_08763812.1| hypothetical protein GOALK_005_00030 [Gordonia alkanivorans NBRC 16433] gi|343765821|dbj|GAA10738.1| hypothetical protein GOALK_005_00030 [Gordonia alkanivorans NBRC 16433] Length=121 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/112 (52%), Positives = 86/112 (77%), Gaps = 0/112 (0%) Query 1 MNWIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWF 60 M W Q+L I ++ L+ + + +R +ARS A VK+ +V FV G+YA+LR DD T VAN Sbjct 1 MIWFQILAIIGLLALVGFFVVNRGTARSSAGVKILFVAFVGFGLYAMLRQDDVTWVANKI 60 Query 61 GVRRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPEQ 112 G++RG DL+L+ LV+AF+FTT+STY+RF+DLE++YAR+ARA+AL+ A+ P + Sbjct 61 GIQRGLDLVLFLLVIAFAFTTVSTYLRFRDLEVKYARLARAIALQNAEKPHR 112 >gi|317509481|ref|ZP_07967097.1| hypothetical protein HMPREF9336_03469 [Segniliparus rugosus ATCC BAA-974] gi|316252233|gb|EFV11687.1| hypothetical protein HMPREF9336_03469 [Segniliparus rugosus ATCC BAA-974] Length=148 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 55/108 (51%), Positives = 81/108 (75%), Gaps = 0/108 (0%) Query 4 IQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVR 63 I+++L+A+ + FYL R+R +AR+ A VK+ ++ F+ G +AVLRPDD + +A GV Sbjct 8 IKLVLLAAGGVIAFYLARARGTARASAAVKLLFLGFLAFGTWAVLRPDDVSALARLLGVG 67 Query 64 RGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPE 111 G +L+LYALV+AF+FTT+STY+RFK+LE RY +AR +AL GA AP+ Sbjct 68 AGMNLLLYALVVAFAFTTVSTYLRFKELEGRYVSLARVIALSGASAPQ 115 >gi|256397273|ref|YP_003118837.1| hypothetical protein Caci_8173 [Catenulispora acidiphila DSM 44928] gi|256363499|gb|ACU76996.1| hypothetical protein Caci_8173 [Catenulispora acidiphila DSM 44928] Length=143 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 50/110 (46%), Positives = 79/110 (72%), Gaps = 0/110 (0%) Query 4 IQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVR 63 IQ++LIA + L + +RS S R++A+ ++G+V+F++ + AVLRP+DTT +A+ GV Sbjct 3 IQIILIAVAVVLFVFFIRSSHSVRTQAFKRIGFVVFLVLSLDAVLRPNDTTWLAHKVGVG 62 Query 64 RGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPEQC 113 RG DL+LY LV AF+F ++T++RF+ LE R+ +ARA+AL AQ P + Sbjct 63 RGADLLLYMLVAAFAFFAVNTFLRFRTLERRFTDLARAVALRDAQLPPEV 112 >gi|262200614|ref|YP_003271822.1| hypothetical protein Gbro_0601 [Gordonia bronchialis DSM 43247] gi|262083961|gb|ACY19929.1| hypothetical protein Gbro_0601 [Gordonia bronchialis DSM 43247] Length=116 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 58/111 (53%), Positives = 85/111 (77%), Gaps = 0/111 (0%) Query 1 MNWIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWF 60 M W Q++ I I+ L+ + + +R +AR+ A VK+ +V FV+ G+YA+LR DD T VA F Sbjct 1 MIWFQIVAILGIVALVAFFVVNRGTARASAGVKLLFVAFVVFGVYAMLRQDDVTWVAKKF 60 Query 61 GVRRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPE 111 G+ RG DL+L+ LV+AF+FTT+STY+RF+DLE+RYAR+ARA+AL+ A+ P Sbjct 61 GIERGLDLVLFLLVLAFAFTTISTYLRFRDLEVRYARLARAIALQNAEKPS 111 >gi|296392556|ref|YP_003657440.1| hypothetical protein Srot_0118 [Segniliparus rotundus DSM 44985] gi|296179703|gb|ADG96609.1| hypothetical protein Srot_0118 [Segniliparus rotundus DSM 44985] Length=162 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/108 (50%), Positives = 76/108 (71%), Gaps = 0/108 (0%) Query 4 IQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVR 63 I+++L+A+ L FYL R+R +AR+ A VK+ ++ F+ G AVLRPDD + A GV Sbjct 10 IKLVLLAAGATLAFYLARARGTARASAAVKLLFLGFLAFGALAVLRPDDVSAFARLLGVG 69 Query 64 RGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPE 111 G +L+LYALV+AF+FTT+STY+RFK+LE RY +AR +AL A P Sbjct 70 AGMNLLLYALVIAFAFTTVSTYLRFKELEGRYVSLARVIALSTASPPS 117 >gi|325002126|ref|ZP_08123238.1| hypothetical protein PseP1_25341 [Pseudonocardia sp. P1] Length=158 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/105 (43%), Positives = 69/105 (66%), Gaps = 0/105 (0%) Query 4 IQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVR 63 +Q+LL+ + IG L Y +RS +S RA ++ + FV+ IYA+LRPDD T VA G+ Sbjct 10 LQILLLVATIGALVYFVRSGQSVGVRASKRLAFGAFVVLNIYAILRPDDVTFVARALGIG 69 Query 64 RGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQ 108 RGTDL++Y LV+AF F L+TY+R +++ +AR +A+ A+ Sbjct 70 RGTDLIVYLLVVAFVFGMLNTYLRDREISQHLTNLARQIAVRDAE 114 >gi|311896575|dbj|BAJ28983.1| hypothetical protein KSE_31730 [Kitasatospora setae KM-6054] Length=131 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 46/111 (42%), Positives = 73/111 (66%), Gaps = 1/111 (0%) Query 3 WIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGV 62 WIQ++LI + L +R A +RAW ++ + +FV+ I+AVLRP D T +A GV Sbjct 5 WIQLILILGSLSLALMFIRRWDRANTRAWKRIAFSVFVVVNIFAVLRPGDVTWLAKQMGV 64 Query 63 RRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALAL-EGAQAPEQ 112 RGTDL+LY +V+ F TL+T++RF+ LE + +AR +A+ EG++A ++ Sbjct 65 GRGTDLVLYVMVLGVGFLTLNTFLRFRSLEKKITDLARTVAINEGSRANDE 115 >gi|256390198|ref|YP_003111762.1| hypothetical protein Caci_0993 [Catenulispora acidiphila DSM 44928] gi|256356424|gb|ACU69921.1| conserved hypothetical protein [Catenulispora acidiphila DSM 44928] Length=124 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/101 (40%), Positives = 66/101 (66%), Gaps = 2/101 (1%) Query 7 LLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVRRGT 66 L+IA++ LLF +R+ S ++ A ++ +++F+ + A+LRP+ VA+ GV RGT Sbjct 8 LVIAAVFLLLF--IRNWYSVQTVALKRLAFLVFIALMVVAILRPNWVNSVAHKVGVGRGT 65 Query 67 DLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGA 107 DL+LY L +AF F +++TY R K E R+ +ARA+A+ A Sbjct 66 DLVLYVLAVAFVFVSVNTYFRLKTQETRFTELARAIAVRDA 106 >gi|88855642|ref|ZP_01130305.1| hypothetical protein A20C1_06076 [marine actinobacterium PHSC20C1] gi|88814966|gb|EAR24825.1| hypothetical protein A20C1_06076 [marine actinobacterium PHSC20C1] Length=121 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 38/111 (35%), Positives = 62/111 (56%), Gaps = 0/111 (0%) Query 3 WIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGV 62 IQ++LI +++ + FYL+R+ SAR A ++ L V+ G+ +L P T VAN G+ Sbjct 2 LIQIILIVALLAIAFYLIRATPSARHLAVRRMLVFLAVIGGVVVILSPGLLTSVANAVGI 61 Query 63 RRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPEQC 113 RGTDL+LY ++AF ++ + R L ++AR L L A ++ Sbjct 62 GRGTDLLLYGFIVAFLLYVVTDFKRSTQLSRANTQLARKLTLAEAHLQDEI 112 >gi|227497936|ref|ZP_03928116.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434] gi|226832644|gb|EEH65027.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434] Length=127 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/102 (43%), Positives = 62/102 (61%), Gaps = 0/102 (0%) Query 4 IQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVR 63 IQ LLI ++ L + +LRS AR +A ++ +LFVL + A+ P T VA+ GV Sbjct 7 IQTLLIIAVAALGWMMLRSPGGARHQAARRLTTLLFVLFAVVAITVPGLVTRVAHVLGVG 66 Query 64 RGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALE 105 RGTDL+LYALV+AF LS++ R E + ++AR +AL Sbjct 67 RGTDLLLYALVIAFLAQVLSSFRRNAARERQITQLARRIALS 108 >gi|317124411|ref|YP_004098523.1| hypothetical protein Intca_1278 [Intrasporangium calvum DSM 43043] gi|315588499|gb|ADU47796.1| hypothetical protein Intca_1278 [Intrasporangium calvum DSM 43043] Length=138 Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 39/105 (38%), Positives = 68/105 (65%), Gaps = 2/105 (1%) Query 4 IQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDT-TVVANWFGV 62 IQ++LIA+ + + + LL + R++A ++G + +Y+++ P T T +A GV Sbjct 7 IQIILIAATLAIAWRLL-AGSGQRTQAVRRLGLLALAGLAVYSIIDPSKTWTSLAQALGV 65 Query 63 RRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGA 107 RG DL+LY LV+AF ++T+ RF+++E+RY R+AR +AL+ A Sbjct 66 GRGADLILYGLVVAFLGFVVTTFKRFREMEVRYTRLARRIALDEA 110 >gi|152967841|ref|YP_001363625.1| hypothetical protein Krad_3898 [Kineococcus radiotolerans SRS30216] gi|151362358|gb|ABS05361.1| conserved hypothetical protein [Kineococcus radiotolerans SRS30216] Length=125 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/94 (43%), Positives = 54/94 (58%), Gaps = 0/94 (0%) Query 21 RSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVRRGTDLMLYALVMAFSFT 80 RS AR +A ++ V + ++L P T VAN GV RG DL+LY LV+AF Sbjct 21 RSTAGARHQAVRRLLLGALVGLAVASILVPGAVTAVANAVGVGRGADLLLYGLVIAFLGF 80 Query 81 TLSTYMRFKDLELRYARIARALALEGAQAPEQCR 114 +S+Y R + LE ++AR LAL+ A APEQ R Sbjct 81 VVSSYRRSRQLEETITQLARRLALDEAPAPEQAR 114 >gi|269957376|ref|YP_003327165.1| hypothetical protein Xcel_2593 [Xylanimonas cellulosilytica DSM 15894] gi|269306057|gb|ACZ31607.1| conserved hypothetical protein [Xylanimonas cellulosilytica DSM 15894] Length=127 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/109 (41%), Positives = 63/109 (58%), Gaps = 0/109 (0%) Query 3 WIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGV 62 IQ++L+ASI + L RS SAR A+ ++ VLFV+ A+L P T +AN GV Sbjct 1 MIQLILLASIALVTVLLGRSTSSARHMAYRRLFLVLFVVGSAAAILFPTALTRLANVLGV 60 Query 63 RRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPE 111 RG+DL+LY LV+AF + R +L + + RALAL+ A+ E Sbjct 61 GRGSDLLLYILVIAFIGSLAMASRRATELGRKLTAVTRALALQEARYDE 109 >gi|91975238|ref|YP_567897.1| hypothetical protein RPD_0758 [Rhodopseudomonas palustris BisB5] gi|91681694|gb|ABE37996.1| conserved hypothetical membrane protein [Rhodopseudomonas palustris BisB5] Length=112 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/113 (35%), Positives = 62/113 (55%), Gaps = 7/113 (6%) Query 4 IQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLA--GIYAVLRPDDTTVVANWFG 61 +Q+ LI+ +I L + RR RA + V +V+ LA GI+ V PD TT +AN G Sbjct 3 MQIFLISGLIMLGIFAATQRR----RAGL-VSFVMIALAVGGIFLVALPDTTTALANALG 57 Query 62 VRRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPEQCR 114 V RG DL+ Y ++ L+ ++R + R+ARA+AL+ A+ P + + Sbjct 58 VGRGADLVSYIFILFTLSAILNLHLRLRAEAEVVTRLARAIALQSAEGPAESK 110 >gi|320532373|ref|ZP_08033217.1| hypothetical protein HMPREF9057_01089 [Actinomyces sp. oral taxon 171 str. F0337] gi|320135413|gb|EFW27517.1| hypothetical protein HMPREF9057_01089 [Actinomyces sp. oral taxon 171 str. F0337] Length=137 Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 37/109 (34%), Positives = 61/109 (56%), Gaps = 0/109 (0%) Query 3 WIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGV 62 +IQ LI ++I + + +LR+ AR A ++ + FV ++ + P + +A+ GV Sbjct 18 YIQAALILAVIAVGWMMLRTPGGARHMAARRLVTLAFVAFAVFNITFPWVMSSIAHRMGV 77 Query 63 RRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPE 111 RGTD +LYALV+AF LS++ R E + +AR +AL+ A P Sbjct 78 GRGTDFLLYALVIAFLAQILSSFRRNSARERQITHLARRIALDNAPEPP 126 >gi|326772105|ref|ZP_08231390.1| membrane protein [Actinomyces viscosus C505] gi|343523909|ref|ZP_08760870.1| hypothetical protein HMPREF9058_1043 [Actinomyces sp. oral taxon 175 str. F0384] gi|326638238|gb|EGE39139.1| membrane protein [Actinomyces viscosus C505] gi|343400126|gb|EGV12647.1| hypothetical protein HMPREF9058_1043 [Actinomyces sp. oral taxon 175 str. F0384] Length=137 Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 37/109 (34%), Positives = 61/109 (56%), Gaps = 0/109 (0%) Query 3 WIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGV 62 +IQ LI ++I + + +LR+ AR A ++ + FV ++ + P + +A+ GV Sbjct 18 YIQAALILAVIAVGWMMLRTPGGARHMAARRLVTLAFVAFAVFNITFPWVMSSIAHRMGV 77 Query 63 RRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPE 111 RGTD +LYALV+AF LS++ R E + +AR +AL+ A P Sbjct 78 GRGTDFLLYALVIAFLAQILSSFRRNSARERQITHLARRIALDNAPEPP 126 >gi|325067593|ref|ZP_08126266.1| hypothetical protein AoriK_07224 [Actinomyces oris K20] Length=137 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 37/109 (34%), Positives = 61/109 (56%), Gaps = 0/109 (0%) Query 3 WIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGV 62 +IQ LI ++I + + +LR+ AR A ++ + FV ++ + P + +A+ GV Sbjct 18 YIQAALILAVIAVGWMMLRTPGGARHMAARRLVTLAFVAFAVFNITFPWVMSSIAHRMGV 77 Query 63 RRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPE 111 RGTD +LYALV+AF LS++ R E + +AR +AL+ A P Sbjct 78 GRGTDFLLYALVIAFLAQILSSFRRNSARERQITHLARRIALDNAPEPP 126 >gi|329944251|ref|ZP_08292510.1| hypothetical protein HMPREF9056_00387 [Actinomyces sp. oral taxon 170 str. F0386] gi|328530981|gb|EGF57837.1| hypothetical protein HMPREF9056_00387 [Actinomyces sp. oral taxon 170 str. F0386] Length=143 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/108 (37%), Positives = 62/108 (58%), Gaps = 0/108 (0%) Query 4 IQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVR 63 IQ +LI ++ + + +LR+ AR +A ++ + FV + A+ P T +A+ GV Sbjct 19 IQAVLILAVAAVGWMMLRTPGGARHQAGRRLATLAFVAFAVAAIAFPSVMTAIAHRVGVG 78 Query 64 RGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPE 111 RGTDL+LYALV+AF LS++ R E + +AR +AL+ A P Sbjct 79 RGTDLLLYALVIAFLAQILSSFRRNGARERQITHLARRIALDDAPEPP 126 >gi|184200549|ref|YP_001854756.1| hypothetical protein KRH_09030 [Kocuria rhizophila DC2201] gi|183580779|dbj|BAG29250.1| hypothetical protein [Kocuria rhizophila DC2201] Length=159 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/107 (35%), Positives = 60/107 (57%), Gaps = 0/107 (0%) Query 4 IQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVR 63 +Q++LI ++ L+R +A+ +A ++ V F L ++L PD T VA G+ Sbjct 5 VQIVLILAVAYGALTLVRGGANAKHQAIRRLAAVAFFLFAAVSILVPDLVTQVARALGIG 64 Query 64 RGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAP 110 RGTDL+LYALV+ F T ++ R + E R+AR +A+ A+ P Sbjct 65 RGTDLVLYALVVLFMVTQYTSAQRRRVEETNVTRLARHIAIAEAEKP 111 >gi|269794189|ref|YP_003313644.1| hypothetical protein Sked_08590 [Sanguibacter keddieii DSM 10542] gi|269096374|gb|ACZ20810.1| hypothetical protein Sked_08590 [Sanguibacter keddieii DSM 10542] Length=123 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/88 (37%), Positives = 49/88 (56%), Gaps = 0/88 (0%) Query 21 RSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVRRGTDLMLYALVMAFSFT 80 RS AR +A ++ + FV+A + ++ P T AN+ GV RGTDL+LYALV+AF Sbjct 20 RSTAGARHQAIRRLALMAFVVAAVLSIAFPVWLTRAANFVGVGRGTDLLLYALVIAFLSY 79 Query 81 TLSTYMRFKDLELRYARIARALALEGAQ 108 +++ R + R + R L L A+ Sbjct 80 ISTSHRRMNQMSRRITLLTRELTLSEAR 107 >gi|227494945|ref|ZP_03925261.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436] gi|226831397|gb|EEH63780.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436] Length=121 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/96 (35%), Positives = 55/96 (58%), Gaps = 4/96 (4%) Query 19 LLRSRRSARSRAWVKVGYVLFV-LAGIYAVLRPDDTTVVANWFGVRRGTDLMLYALVMAF 77 ++R +SA A ++G + F+ +A + AV P T VA + G+ RG DL+LY L +AF Sbjct 27 IIRPVKSASHLAIRRLGMLFFIGVAAVTAVF-PQIVTYVAQYLGIGRGADLLLYGLTIAF 85 Query 78 SFTTLST-YMRFKDLELRYARIARALALEGAQAPEQ 112 F++L+T Y + E + ++AR +AL Q + Sbjct 86 -FSSLATAYRKDSATERKLTKLARTIALSDVQHKTE 120 >gi|320094286|ref|ZP_08026078.1| hypothetical protein HMPREF9005_0690 [Actinomyces sp. oral taxon 178 str. F0338] gi|319978778|gb|EFW10329.1| hypothetical protein HMPREF9005_0690 [Actinomyces sp. oral taxon 178 str. F0338] Length=159 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/105 (31%), Positives = 56/105 (54%), Gaps = 0/105 (0%) Query 4 IQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVR 63 I+ LL+ ++ + + L+R RS S A ++ L ++ AVL P VA GV Sbjct 6 IKALLLGALCLMTWALVRPVRSQSSLAVRRLATALLMVCAAAAVLFPQVANTVARAIGVE 65 Query 64 RGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQ 108 RG +L+ Y L++AF +++ Y R ++ + +AR +AL A+ Sbjct 66 RGVNLLTYGLIVAFFAQSVTAYRRDTAVQRQLTALARQVALASAR 110 >gi|297570683|ref|YP_003696457.1| hypothetical protein Arch_0073 [Arcanobacterium haemolyticum DSM 20595] gi|296931030|gb|ADH91838.1| conserved hypothetical protein [Arcanobacterium haemolyticum DSM 20595] Length=122 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/105 (33%), Positives = 56/105 (54%), Gaps = 0/105 (0%) Query 4 IQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVR 63 I+V+L+ I L ++ R SAR A ++ ++L + I AV+ P T VAN+ GV Sbjct 8 IKVILVTIFIVLALAIIVPRESARGLAIRRISWLLGIFLAIIAVIFPSMTDHVANFVGVG 67 Query 64 RGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQ 108 RG DL+LY ++ F +T + L+ + ++R AL A+ Sbjct 68 RGADLILYLSIVFFIGFAFATGSHMRKLDRKLTLLSRKYALLEAE 112 >gi|87309021|ref|ZP_01091159.1| hypothetical protein DSM3645_19728 [Blastopirellula marina DSM 3645] gi|87288364|gb|EAQ80260.1| hypothetical protein DSM3645_19728 [Blastopirellula marina DSM 3645] Length=119 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/114 (33%), Positives = 57/114 (50%), Gaps = 2/114 (1%) Query 1 MNWIQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWF 60 M Q L I IIG Y L + R R+ V + + A A+L P+ +A++ Sbjct 1 MTPFQWLAITFIIGAACYELVNIRQQRAVRMVGLFRGVIWFAAALAILFPNQIGRLASFV 60 Query 61 GVRRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQ--APEQ 112 G+ RG D++LY+ V+ F TT Y R+ L+ + + R LA++ A A EQ Sbjct 61 GIGRGADVILYSFVLIFMATTFYFYSRYLRLQRQITDLVRYLAIQEASRGAEEQ 114 >gi|257069233|ref|YP_003155488.1| hypothetical protein Bfae_20910 [Brachybacterium faecium DSM 4810] gi|256560051|gb|ACU85898.1| uncharacterized conserved protein [Brachybacterium faecium DSM 4810] Length=141 Score = 43.1 bits (100), Expect = 0.015, Method: Compositional matrix adjust. Identities = 41/112 (37%), Positives = 60/112 (54%), Gaps = 3/112 (2%) Query 4 IQVLLIASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVR 63 +Q+LL+ I+ ++ +L +R A+ A ++ + F + + AVL P T AN GV Sbjct 22 VQLLLVLGIVVIVAWLF-VKRGAKQLAVRRLLIIAFAVFAVAAVLFPGMLTRAANLVGVG 80 Query 64 RGTDLMLYALVMA-FSFTTLSTYMRFKDLELRYARIARALALEGAQAPEQCR 114 RG DL+LYA V+ F L R K E R +AR LAL+ A+ P Q R Sbjct 81 RGADLLLYATVLVLLGFLALQEA-RTKAAEKRTTYLARRLALDEAEQPAQFR 131 >gi|315606098|ref|ZP_07881129.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315312380|gb|EFU60466.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] Length=156 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 24/57 (43%), Positives = 33/57 (58%), Gaps = 0/57 (0%) Query 20 LRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVRRGTDLMLYALVMA 76 +R SA S A ++G L V A I A+L P VA+ GV RG +L++Y LV+A Sbjct 23 MRPVTSASSLALRRLGIGLLVTAAIVAILVPSLANTVAHAIGVERGVNLIVYGLVLA 79 >gi|116623724|ref|YP_825880.1| hypothetical protein Acid_4636 [Candidatus Solibacter usitatus Ellin6076] gi|116226886|gb|ABJ85595.1| conserved hypothetical protein [Candidatus Solibacter usitatus Ellin6076] Length=115 Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust. Identities = 31/115 (27%), Positives = 54/115 (47%), Gaps = 11/115 (9%) Query 1 MNWIQVLLIASIIG--LLFYLLRSRRSARSRAWVKVGYVLFVLAGIYA--VLRPDDTTVV 56 M +Q +LIA+++ LL++ +R R + G ++ V G + V+RP+ + Sbjct 1 MIPVQPILIAALVAVVLLYF-------SRLRTKIADGLIILVCFGCASLLVIRPNIANRI 53 Query 57 ANWFGVRRGTDLMLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEGAQAPE 111 AN GV RG DL+LY + L + + + L + R A+ A P+ Sbjct 54 ANLVGVGRGADLILYLALPGMLMMILLLFAKTRQLNAKLTAAVREYAIRDASGPQ 108 >gi|148643684|ref|YP_001274197.1| hypothetical protein Msm_1624 [Methanobrevibacter smithii ATCC 35061] gi|222444834|ref|ZP_03607349.1| hypothetical protein METSMIALI_00447 [Methanobrevibacter smithii DSM 2375] gi|261350594|ref|ZP_05976011.1| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374] gi|148552701|gb|ABQ87829.1| conserved hypothetical protein Msm_1624 [Methanobrevibacter smithii ATCC 35061] gi|222434399|gb|EEE41564.1| hypothetical protein METSMIALI_00447 [Methanobrevibacter smithii DSM 2375] gi|288861377|gb|EFC93675.1| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374] Length=115 Score = 39.7 bits (91), Expect = 0.17, Method: Compositional matrix adjust. Identities = 21/98 (22%), Positives = 52/98 (54%), Gaps = 1/98 (1%) Query 9 IASIIGLLFYLLRSRRSARSRAWVKVGYVLFVLAGIYAVLRPDDTTVVANWFGVRRGTDL 68 + +++ +L++ +R R+ + + + + +L++ ++A L PD + V AN FG+ RG D Sbjct 10 VIAVLAILWFAVRVRKGKNTISTLILWIILWIFLVLFA-LVPDISMVFANLFGITRGLDF 68 Query 69 MLYALVMAFSFTTLSTYMRFKDLELRYARIARALALEG 106 ++ + ++ + Y + LE ++ + +AL Sbjct 69 IVIVVFAVMAYIIVRLYYKLDKLENDINKMVKEIALSN 106 Lambda K H 0.332 0.141 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 131546402790 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40