BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3633
Length=291
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610769|ref|NP_218150.1| hypothetical protein Rv3633 [Mycoba... 596 2e-168
gi|306778517|ref|ZP_07416854.1| hypothetical protein TMBG_02169 ... 594 4e-168
gi|340628598|ref|YP_004747050.1| hypothetical protein MCAN_36451... 589 1e-166
gi|339296446|gb|AEJ48557.1| hypothetical protein CCDC5079_3368 [... 449 3e-124
gi|154253118|ref|YP_001413942.1| phytanoyl-CoA dioxygenase [Parv... 210 2e-52
gi|192288876|ref|YP_001989481.1| Phytanoyl-CoA dioxygenase [Rhod... 179 6e-43
gi|39933518|ref|NP_945794.1| hypothetical protein RPA0441 [Rhodo... 175 7e-42
gi|316931574|ref|YP_004106556.1| Phytanoyl-CoA dioxygenase [Rhod... 173 3e-41
gi|154250668|ref|YP_001411492.1| phytanoyl-CoA dioxygenase [Parv... 168 1e-39
gi|311104573|ref|YP_003977426.1| phytanoyl-CoA dioxygenase [Achr... 150 2e-34
gi|183981567|ref|YP_001849858.1| hypothetical protein MMAR_1551 ... 136 4e-30
gi|118618777|ref|YP_907109.1| hypothetical protein MUL_3479 [Myc... 132 7e-29
gi|41409258|ref|NP_962094.1| hypothetical protein MAP3160 [Mycob... 131 1e-28
gi|118467270|ref|YP_883146.1| phytanoyl-CoA dioxygenase (PhyH) f... 130 3e-28
gi|336459287|gb|EGO38231.1| protein involved in biosynthesis of ... 129 8e-28
gi|342860984|ref|ZP_08717633.1| phytanoyl-CoA dioxygenase (PhyH)... 128 1e-27
gi|254776406|ref|ZP_05217922.1| phytanoyl-CoA dioxygenase (PhyH)... 127 2e-27
gi|164511453|emb|CAN89654.1| hypothetical protein [Streptomyces ... 127 3e-27
gi|296169237|ref|ZP_06850890.1| phytanoyl-CoA dioxygenase [Mycob... 126 3e-27
gi|254821154|ref|ZP_05226155.1| phytanoyl-CoA dioxygenase (PhyH)... 124 2e-26
gi|124006461|ref|ZP_01691294.1| phytanoyl-CoA dioxygenase (PhyH)... 123 4e-26
gi|156055700|ref|XP_001593774.1| hypothetical protein SS1G_05202... 121 1e-25
gi|109900071|ref|YP_663326.1| phytanoyl-CoA dioxygenase [Pseudoa... 121 1e-25
gi|154297991|ref|XP_001549420.1| hypothetical protein BC1G_12148... 120 2e-25
gi|40063111|gb|AAR37958.1| conserved hypothetical protein [uncul... 120 2e-25
gi|169629677|ref|YP_001703326.1| hypothetical protein MAB_2591c ... 120 3e-25
gi|119504015|ref|ZP_01626096.1| hypothetical protein MGP2080_097... 120 3e-25
gi|119478425|ref|ZP_01618410.1| hypothetical protein GP2143_0691... 119 4e-25
gi|329898676|ref|ZP_08272438.1| hypothetical protein IMCC3088_64... 119 7e-25
gi|240169800|ref|ZP_04748459.1| phytanoyl-CoA dioxygenase (PhyH)... 118 1e-24
gi|85375045|ref|YP_459107.1| hypothetical protein ELI_11090 [Ery... 116 3e-24
gi|226362445|ref|YP_002780223.1| hypothetical protein ROP_30310 ... 116 5e-24
gi|318075467|ref|ZP_07982799.1| hypothetical protein SSA3_01792 ... 114 2e-23
gi|302519381|ref|ZP_07271723.1| phytanoyl-CoA dioxygenase [Strep... 114 2e-23
gi|83945008|ref|ZP_00957374.1| hypothetical protein OA2633_10274... 113 4e-23
gi|78059906|ref|YP_366481.1| phytanoyl-CoA dioxygenase [Burkhold... 111 1e-22
gi|212544946|ref|XP_002152627.1| integral membrane protein, puta... 111 1e-22
gi|119505785|ref|ZP_01627852.1| hypothetical protein MGP2080_025... 111 2e-22
gi|342876117|gb|EGU77776.1| hypothetical protein FOXB_11706 [Fus... 111 2e-22
gi|254515517|ref|ZP_05127577.1| phytanoyl-CoA dioxygenase (PhyH)... 110 2e-22
gi|107101664|ref|ZP_01365582.1| hypothetical protein PaerPA_0100... 110 3e-22
gi|320034995|gb|EFW16937.1| phytanoyl-CoA dioxygenase [Coccidioi... 110 3e-22
gi|313110900|ref|ZP_07796743.1| hypothetical protein PA39016_002... 110 4e-22
gi|294011955|ref|YP_003545415.1| protein involved in biosynthesi... 110 4e-22
gi|254240660|ref|ZP_04933982.1| hypothetical protein PA2G_01319 ... 109 4e-22
gi|218891810|ref|YP_002440677.1| hypothetical protein PLES_30881... 109 5e-22
gi|254282313|ref|ZP_04957281.1| phytanoyl-CoA dioxygenase [gamma... 108 7e-22
gi|239502570|ref|ZP_04661880.1| phytanoyl-CoA dioxygenase [Acine... 108 1e-21
gi|291442185|ref|ZP_06581575.1| phytanoyl-CoA dioxygenase [Strep... 108 1e-21
gi|4895124|gb|AAD32731.1| MmcH [Streptomyces lavendulae] 108 1e-21
>gi|15610769|ref|NP_218150.1| hypothetical protein Rv3633 [Mycobacterium tuberculosis H37Rv]
gi|15843245|ref|NP_338282.1| hypothetical protein MT3735 [Mycobacterium tuberculosis CDC1551]
gi|31794803|ref|NP_857296.1| hypothetical protein Mb3657 [Mycobacterium bovis AF2122/97]
63 more sequence titles
Length=291
Score = 596 bits (1536), Expect = 2e-168, Method: Compositional matrix adjust.
Identities = 291/291 (100%), Positives = 291/291 (100%), Gaps = 0/291 (0%)
Query 1 MTQSSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLA 60
MTQSSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLA
Sbjct 1 MTQSSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLA 60
Query 61 RPGHVPVDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLP 120
RPGHVPVDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLP
Sbjct 61 RPGHVPVDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLP 120
Query 121 GAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPE 180
GAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPE
Sbjct 121 GAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPE 180
Query 181 GKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRC 240
GKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRC
Sbjct 181 GKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRC 240
Query 241 FEPRLQELIGYGLYAGKMGRIDWRPPADYLDADRHPFLDAVADRLQTSVRL 291
FEPRLQELIGYGLYAGKMGRIDWRPPADYLDADRHPFLDAVADRLQTSVRL
Sbjct 241 FEPRLQELIGYGLYAGKMGRIDWRPPADYLDADRHPFLDAVADRLQTSVRL 291
>gi|306778517|ref|ZP_07416854.1| hypothetical protein TMBG_02169 [Mycobacterium tuberculosis SUMu002]
gi|306786539|ref|ZP_07424861.1| hypothetical protein TMCG_01132 [Mycobacterium tuberculosis SUMu003]
gi|306790906|ref|ZP_07429228.1| hypothetical protein TMDG_01365 [Mycobacterium tuberculosis SUMu004]
13 more sequence titles
Length=291
Score = 594 bits (1532), Expect = 4e-168, Method: Compositional matrix adjust.
Identities = 290/291 (99%), Positives = 291/291 (100%), Gaps = 0/291 (0%)
Query 1 MTQSSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLA 60
MTQSSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLA
Sbjct 1 MTQSSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLA 60
Query 61 RPGHVPVDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLP 120
RPGHVPVDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLP
Sbjct 61 RPGHVPVDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLP 120
Query 121 GAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPE 180
GAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERP+PPYPE
Sbjct 121 GAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPAPPYPE 180
Query 181 GKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRC 240
GKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRC
Sbjct 181 GKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRC 240
Query 241 FEPRLQELIGYGLYAGKMGRIDWRPPADYLDADRHPFLDAVADRLQTSVRL 291
FEPRLQELIGYGLYAGKMGRIDWRPPADYLDADRHPFLDAVADRLQTSVRL
Sbjct 241 FEPRLQELIGYGLYAGKMGRIDWRPPADYLDADRHPFLDAVADRLQTSVRL 291
>gi|340628598|ref|YP_004747050.1| hypothetical protein MCAN_36451 [Mycobacterium canettii CIPT
140010059]
gi|340006788|emb|CCC45976.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=291
Score = 589 bits (1519), Expect = 1e-166, Method: Compositional matrix adjust.
Identities = 289/291 (99%), Positives = 289/291 (99%), Gaps = 0/291 (0%)
Query 1 MTQSSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLA 60
MTQSSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLA
Sbjct 1 MTQSSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLA 60
Query 61 RPGHVPVDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLP 120
RPGHVPVDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLP
Sbjct 61 RPGHVPVDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLP 120
Query 121 GAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPE 180
GAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPE
Sbjct 121 GAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPE 180
Query 181 GKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRC 240
GKPVEI AGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVR
Sbjct 181 GKPVEIKAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRR 240
Query 241 FEPRLQELIGYGLYAGKMGRIDWRPPADYLDADRHPFLDAVADRLQTSVRL 291
FEPRLQELIGYGLYAGKMGRIDWRPPADYLDADRHPFLDAVADRLQTSVRL
Sbjct 241 FEPRLQELIGYGLYAGKMGRIDWRPPADYLDADRHPFLDAVADRLQTSVRL 291
>gi|339296446|gb|AEJ48557.1| hypothetical protein CCDC5079_3368 [Mycobacterium tuberculosis
CCDC5079]
Length=217
Score = 449 bits (1154), Expect = 3e-124, Method: Compositional matrix adjust.
Identities = 216/217 (99%), Positives = 217/217 (100%), Gaps = 0/217 (0%)
Query 75 VRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCDDEMY 134
+RIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCDDEMY
Sbjct 1 MRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCDDEMY 60
Query 135 PLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPEGKPVEINAGDALIW 194
PLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPEGKPVEINAGDALIW
Sbjct 61 PLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPEGKPVEINAGDALIW 120
Query 195 NGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELIGYGLY 254
NGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELIGYGLY
Sbjct 121 NGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELIGYGLY 180
Query 255 AGKMGRIDWRPPADYLDADRHPFLDAVADRLQTSVRL 291
AGKMGRIDWRPPADYLDADRHPFLDAVADRLQTSVRL
Sbjct 181 AGKMGRIDWRPPADYLDADRHPFLDAVADRLQTSVRL 217
>gi|154253118|ref|YP_001413942.1| phytanoyl-CoA dioxygenase [Parvibaculum lavamentivorans DS-1]
gi|154157068|gb|ABS64285.1| Phytanoyl-CoA dioxygenase [Parvibaculum lavamentivorans DS-1]
Length=269
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/270 (41%), Positives = 160/270 (60%), Gaps = 16/270 (5%)
Query 9 RLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLARPGHVPVD 68
R + +D GYT+VE+ ++ + RLER++ V A + +G
Sbjct 8 RHIATVDAEGYTIVENAIEPALIDELNETLLRLERDMNVVPAKNG--FEG---------- 55
Query 69 RVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLH 128
H VRI NLL G ++ +PVH +LPVIEGVL + CL+S + + PG +Q +H
Sbjct 56 ---HHTVRIYNLLAFGAVFQRIPVHSSVLPVIEGVLDKGCLISSLSSISIDPGEKSQPIH 112
Query 129 CDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPS-PPYPEGKPVEIN 187
DD++ P+ +PH P +CN++ AL DFT +NGAT+++PG+H+W P + + P E+
Sbjct 113 ADDQVMPVAKPHAPFVCNSMWALTDFTEENGATRIIPGTHKWDRSPEYGTHYDSIPAEMP 172
Query 188 AGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQE 247
G LIW+GSLWH AN++ A R + +N+C GF+RQQ NQQL +P +LV+ FEPRLQE
Sbjct 173 KGSVLIWHGSLWHGGGANKSGARRVGIAMNYCAGFIRQQENQQLGLPLDLVKTFEPRLQE 232
Query 248 LIGYGLYAGKMGRIDWRPPADYLDADRHPF 277
L G+G Y +G ID + PA L + F
Sbjct 233 LCGFGTYMNLIGHIDKKTPAQRLLGETRDF 262
>gi|192288876|ref|YP_001989481.1| Phytanoyl-CoA dioxygenase [Rhodopseudomonas palustris TIE-1]
gi|192282625|gb|ACE99005.1| Phytanoyl-CoA dioxygenase [Rhodopseudomonas palustris TIE-1]
Length=282
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/277 (37%), Positives = 153/277 (56%), Gaps = 20/277 (7%)
Query 1 MTQSSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLA 60
M + + I + GYTV+E D VAA + R+ER+ + + T +G
Sbjct 1 MLSEADITTHAQRIRDDGYTVIERAADPALVAALIGAVERIERDHQ--LGCAKTSFEGFK 58
Query 61 RPGHVPVDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLP 120
+R++NLL + + +P+H +LP++E VL ++CLLS + P
Sbjct 59 T-------------LRVNNLLTYDEVFWDVPLHSSVLPIVEAVLDKECLLSSFCSLVLGP 105
Query 121 GAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPE 180
G AQ +H D ++ PLPRPH P+ NA+ AL DFTA NGAT+++PGSH++ SP Y +
Sbjct 106 GQEAQPIHEDTQLIPLPRPHIPITLNAIWALSDFTATNGATRIIPGSHKYAT--SPVYGQ 163
Query 181 ---GKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPREL 237
+ AG ++++ +LWH N +DA R A + +C G++RQQ N QL IPRE+
Sbjct 164 DYDAVTATMPAGSVMLFDSALWHGGGPNSSDARRFAFSCAYCWGWMRQQENLQLGIPREI 223
Query 238 VRCFEPRLQELIGYGLYAGKMGRIDWRPPADYLDADR 274
+ F RLQEL GY +Y G+ G ID R P + L +R
Sbjct 224 AQRFPRRLQELCGYSVYKGQFGHIDNRDPIELLGRER 260
>gi|39933518|ref|NP_945794.1| hypothetical protein RPA0441 [Rhodopseudomonas palustris CGA009]
gi|39647364|emb|CAE25885.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length=282
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/277 (37%), Positives = 152/277 (55%), Gaps = 20/277 (7%)
Query 1 MTQSSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLA 60
M + + I + GYTV+E D VAA + R+ER+ + + T +G
Sbjct 1 MLSEADITTHAQRIRDDGYTVIERAADPALVAALIGAVERIERDHQ--LGCAKTSFEGFK 58
Query 61 RPGHVPVDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLP 120
+R++NLL + + +P+H +LPV+E VL ++CLLS + P
Sbjct 59 T-------------LRVNNLLTYDEVFWEVPLHSSVLPVVEAVLDKECLLSSFCSLVLGP 105
Query 121 GAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPE 180
G AQ +H D ++ PLPRPH P+ NA+ AL DFTA NGAT+++PGSH++ SP Y +
Sbjct 106 GQEAQPIHEDTQLIPLPRPHIPITLNAIWALSDFTATNGATRIIPGSHKY--ETSPVYGQ 163
Query 181 ---GKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPREL 237
+ AG ++++ +LWH N ++A R A + +C G++RQQ N QL IPRE+
Sbjct 164 DYDAVTATMPAGSVMLFDSALWHGGGPNTSEARRFAFSCAYCWGWMRQQENLQLGIPREI 223
Query 238 VRCFEPRLQELIGYGLYAGKMGRIDWRPPADYLDADR 274
+ F RLQEL GY +Y G+ G ID P + L +R
Sbjct 224 AQRFPRRLQELCGYSVYKGQFGHIDNGDPIELLGRER 260
>gi|316931574|ref|YP_004106556.1| Phytanoyl-CoA dioxygenase [Rhodopseudomonas palustris DX-1]
gi|315599288|gb|ADU41823.1| Phytanoyl-CoA dioxygenase [Rhodopseudomonas palustris DX-1]
Length=282
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/277 (37%), Positives = 150/277 (55%), Gaps = 20/277 (7%)
Query 1 MTQSSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLA 60
M + + I + GYTV+E D VAA + R+ER+ A T +G
Sbjct 1 MLSEAEITTHARRIRDDGYTVIERAADPALVAALIEAVERIERDHQLDCAK--TSFEGFK 58
Query 61 RPGHVPVDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLP 120
+R++NLL + + +P+H +LP++E VL ++CLLS + P
Sbjct 59 T-------------LRVNNLLTYDEVFWQVPLHGSVLPIVEAVLDKECLLSSFCSLVLGP 105
Query 121 GAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPE 180
G AQ +H D ++ PLPRPH P+ NA+ AL DFTA NGAT+++PGSH+ SP Y +
Sbjct 106 GQEAQPIHEDTQLIPLPRPHIPITLNAIWALSDFTATNGATRIIPGSHK--NETSPVYGQ 163
Query 181 ---GKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPREL 237
+ AG ++++ +LWH N ++A R A + +C G++RQQ N QL IPRE+
Sbjct 164 DYDAITATMPAGSVMLFDSALWHGGGPNTSEARRFAFSCAYCWGWMRQQENLQLGIPREI 223
Query 238 VRCFEPRLQELIGYGLYAGKMGRIDWRPPADYLDADR 274
+ F RLQEL GY +Y G+ G ID P + L +R
Sbjct 224 AQRFPRRLQELCGYSVYKGQFGHIDNHDPIELLGRER 260
>gi|154250668|ref|YP_001411492.1| phytanoyl-CoA dioxygenase [Parvibaculum lavamentivorans DS-1]
gi|154154618|gb|ABS61835.1| Phytanoyl-CoA dioxygenase [Parvibaculum lavamentivorans DS-1]
Length=315
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/265 (37%), Positives = 134/265 (51%), Gaps = 16/265 (6%)
Query 7 VERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLARPGHVP 66
+E + + GY + E+V++ + V+ + R+ER+ G
Sbjct 40 LEAKFADFERDGYVIFENVIEPELVSEIREELLRVERD---------------NNMGFRD 84
Query 67 VDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQR 126
D VRI NLL HG + +P+H LP E VL + +S + PG AQ
Sbjct 85 TDFEGKQTVRIYNLLAHGPTFWKIPIHEATLPFAEKVLDEELQVSSVSSITLCPGQGAQP 144
Query 127 LHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYP-EGKPVE 185
LH DD++ P+P+PHQP N + A+ DFT +NGAT++VPGSH+ P + E
Sbjct 145 LHADDQLIPVPKPHQPFTLNCVWAISDFTEENGATRLVPGSHKASGMPDYDMEMDTVAGE 204
Query 186 INAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRL 245
+ AG L W+GSLWH NR+ R + +C GF+RQQ NQQL IP E R F RL
Sbjct 205 MPAGSVLFWHGSLWHAGGNNRSKERRFCVANYYCAGFIRQQENQQLGIPLEEARKFPRRL 264
Query 246 QELIGYGLYAGKMGRIDWRPPADYL 270
QEL GY +Y G G +D P L
Sbjct 265 QELCGYSVYRGLYGHVDNADPIGML 289
>gi|311104573|ref|YP_003977426.1| phytanoyl-CoA dioxygenase [Achromobacter xylosoxidans A8]
gi|310759262|gb|ADP14711.1| phytanoyl-CoA dioxygenase PhyH family protein 3 [Achromobacter
xylosoxidans A8]
Length=282
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/287 (36%), Positives = 151/287 (53%), Gaps = 21/287 (7%)
Query 1 MTQSSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLA 60
MT ++ + + G+ V+ ++ + V+ R+E E + + T +G
Sbjct 1 MTTPEPLDERIAAFERDGFVVLPGIIPPEQVSQLQEALIRIEAE--HNLGYAQTSFEG-- 56
Query 61 RPGHVPVDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLP 120
VRI+NLL++ + +P+ P++L + E +L R+ LLS + P
Sbjct 57 -----------RKTVRINNLLVYDPCFWDVPLQPEVLALAERLLDRELLLSSLCSLTLAP 105
Query 121 GAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYP- 179
G AQ LH D + LPRP PL NA+ AL DFTA+NGAT +VPGSHR+ SPPY
Sbjct 106 GQGAQPLHEDTQQLALPRPRPPLAVNAIWALSDFTAENGATHIVPGSHRYDS--SPPYGA 163
Query 180 ---EGKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRE 236
E + AG ++++ +LWH AN ++A R AL+ +C G++RQQ N QL IP +
Sbjct 164 QDIETAQATMKAGSVMLFDSALWHKGGANNSNARRYALSCYYCAGWIRQQENLQLGIPAD 223
Query 237 LVRCFEPRLQELIGYGLYAGKMGRIDWRPPADYLDADRHPFLDAVAD 283
+VR F RLQEL GY +Y G+ G ID P L + P + +D
Sbjct 224 MVRRFPRRLQELCGYSIYKGQYGHIDNADPITLLGGEGRPTVWQASD 270
>gi|183981567|ref|YP_001849858.1| hypothetical protein MMAR_1551 [Mycobacterium marinum M]
gi|183174893|gb|ACC40003.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=287
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/272 (34%), Positives = 138/272 (51%), Gaps = 25/272 (9%)
Query 4 SSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLARPG 63
S+++E + +D GY + E++L A+ RL RE+ RP
Sbjct 34 SATIEADMAALDRDGYVIWENLLSAEQC--------RLIREV--------------VRPW 71
Query 64 HVPVDRVDHDWVRIDNL--LLHGTRY-EALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLP 120
R + R + +L TR + L HP++L V++ +L + LLS N LP
Sbjct 72 LEHTGRNSFEGRRTQRIYSVLSRTRVCDRLADHPRVLAVLDRILMPNYLLSALQAINILP 131
Query 121 GAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPE 180
G AQ H DD YP+PRP PL + A+ DFTADNGAT V+PGSHRW RP P +
Sbjct 132 GEDAQLPHHDDGFYPIPRPRAPLAAATIWAIDDFTADNGATVVIPGSHRWGRRPPGPDDQ 191
Query 181 GKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRC 240
PV ++AG + + G+LWH AN + + R A+T +C ++R LSI RE+ R
Sbjct 192 VLPVVMSAGSCVFFVGTLWHGGGANTSTSERLAVTAQYCEPWLRPMEAYTLSISREIARA 251
Query 241 FEPRLQELIGYGLYAGKMGRIDWRPPADYLDA 272
++ ++GY ++ +G +D P L++
Sbjct 252 VSDDIRRMLGYSIHPPFVGAVDGLHPLRLLES 283
>gi|118618777|ref|YP_907109.1| hypothetical protein MUL_3479 [Mycobacterium ulcerans Agy99]
gi|118570887|gb|ABL05638.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=282
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/262 (33%), Positives = 132/262 (51%), Gaps = 25/262 (9%)
Query 4 SSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLARPG 63
S+++E + +D GY + E++L A+ +++ + RP
Sbjct 32 SATIEADMAALDRDGYVIWENLLSAEQC----------------------RLIQEVVRPW 69
Query 64 HVPVDRVDHDWVRIDNL--LLHGTRY-EALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLP 120
R + R + +L TR + L HP++L V++ +L + LLS N LP
Sbjct 70 LEHTGRNSFEGRRTQRIYSVLSRTRVCDRLADHPRVLAVLDRILMPNYLLSALQAINILP 129
Query 121 GAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPE 180
G AQ H DD YP+PRP PL + A+ DFTADNGAT V+PGSHRW RP P +
Sbjct 130 GEDAQLPHHDDGFYPIPRPRAPLAAATIWAIDDFTADNGATVVIPGSHRWGRRPPGPDDQ 189
Query 181 GKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRC 240
PV + AG + + G+LWH AN + + R A+T +C ++R LSI RE+ R
Sbjct 190 VLPVVMPAGSCVFFVGTLWHGGGANTSTSERLAVTAQYCEPWLRPMEAYILSISREIARA 249
Query 241 FEPRLQELIGYGLYAGKMGRID 262
++ ++GY ++ +G +D
Sbjct 250 VSDDIRRMLGYSIHPPFVGAVD 271
>gi|41409258|ref|NP_962094.1| hypothetical protein MAP3160 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41398078|gb|AAS05708.1| hypothetical protein MAP_3160 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=277
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/198 (37%), Positives = 110/198 (56%), Gaps = 0/198 (0%)
Query 76 RIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCDDEMYP 135
R+ ++L + L HP++L V++ +L + LLS N PG AQ H DD YP
Sbjct 77 RVYSVLSRTRMCDRLVDHPRVLAVLDRLLMPNYLLSALQAINIQPGEAAQLAHHDDGFYP 136
Query 136 LPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPEGKPVEINAGDALIWN 195
+PRP PL + A+ DFTADNGAT + PGSHRW +R P E PV + AG +++
Sbjct 137 VPRPRAPLAAATIWAIDDFTADNGATVLYPGSHRWGKRRPGPDDEAIPVVMPAGSCVLFV 196
Query 196 GSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELIGYGLYA 255
G+LWH AN TD R A+T +C ++R LS+PR++ R ++ ++GY ++
Sbjct 197 GTLWHGGGANTTDRDRLAVTAQYCQPWLRPMEAFTLSVPRDIARTVSDDIRRMLGYSIHP 256
Query 256 GKMGRIDWRPPADYLDAD 273
+G +D P L+ +
Sbjct 257 PFVGAVDGLHPLRLLEME 274
>gi|118467270|ref|YP_883146.1| phytanoyl-CoA dioxygenase (PhyH) family protein [Mycobacterium
avium 104]
gi|118168557|gb|ABK69454.1| phytanoyl-CoA dioxygenase (PhyH) family protein [Mycobacterium
avium 104]
Length=287
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/170 (40%), Positives = 98/170 (58%), Gaps = 0/170 (0%)
Query 93 HPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCDDEMYPLPRPHQPLLCNALIALC 152
HP++L V++ +L + LLS N PG AQ H DD YP+PRP PL + A+
Sbjct 104 HPRVLAVLDRLLMPNYLLSALQAINIQPGEAAQLAHHDDGFYPVPRPRAPLAAATIWAID 163
Query 153 DFTADNGATQVVPGSHRWPERPSPPYPEGKPVEINAGDALIWNGSLWHTAAANRTDAPRP 212
DFTADNGAT + PGSHRW +R P E PV + G +++ G+LWH AN TD R
Sbjct 164 DFTADNGATVLYPGSHRWGKRRPGPDDEAIPVVMPVGSCVLFVGTLWHGGGANTTDRDRL 223
Query 213 ALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELIGYGLYAGKMGRID 262
A+T +C ++R LS+PR++ R ++ ++GY ++ +G +D
Sbjct 224 AVTAQYCQPWLRPMEAFTLSVPRDIARTVSDDIRRMLGYSIHPPFVGAVD 273
>gi|336459287|gb|EGO38231.1| protein involved in biosynthesis of mitomycin antibiotics/polyketide
fumonisin [Mycobacterium avium subsp. paratuberculosis
S397]
Length=287
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/198 (37%), Positives = 109/198 (56%), Gaps = 0/198 (0%)
Query 76 RIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCDDEMYP 135
R+ ++L + L HP++L V++ +L + LLS N PG AQ H DD Y
Sbjct 87 RVYSVLSRTRMCDRLVDHPRVLAVLDRLLMPNYLLSALQAINIQPGEAAQLAHHDDGFYA 146
Query 136 LPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPEGKPVEINAGDALIWN 195
+PRP PL + A+ DFTADNGAT + PGSHRW +R P E PV + AG +++
Sbjct 147 VPRPRAPLAAATIWAIDDFTADNGATVLYPGSHRWGKRRPGPDDEAIPVVMPAGSCVLFV 206
Query 196 GSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELIGYGLYA 255
G+LWH AN TD R A+T +C ++R LS+PR++ R ++ ++GY ++
Sbjct 207 GTLWHGGGANTTDRDRLAVTAQYCQPWLRPMEAFTLSVPRDIARTVSDDIRRMLGYSIHP 266
Query 256 GKMGRIDWRPPADYLDAD 273
+G +D P L+ +
Sbjct 267 PFVGAVDGLHPLRLLEME 284
>gi|342860984|ref|ZP_08717633.1| phytanoyl-CoA dioxygenase (PhyH) family protein [Mycobacterium
colombiense CECT 3035]
gi|342131428|gb|EGT84698.1| phytanoyl-CoA dioxygenase (PhyH) family protein [Mycobacterium
colombiense CECT 3035]
Length=289
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/180 (38%), Positives = 100/180 (56%), Gaps = 0/180 (0%)
Query 94 PKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCDDEMYPLPRPHQPLLCNALIALCD 153
P++L ++ +L + LLS N PG AQ H DD YP+PRP +PL + A+ D
Sbjct 105 PRVLAALDRLLMPNYLLSALQAINIQPGEAAQLAHHDDGFYPIPRPREPLAAATIWAIDD 164
Query 154 FTADNGATQVVPGSHRWPERPSPPYPEGKPVEINAGDALIWNGSLWHTAAANRTDAPRPA 213
FTADNGAT V PGSHRW +R P + PV + AG + + G+LWH AN TD R A
Sbjct 165 FTADNGATVVYPGSHRWGKRRPGPADQALPVVMPAGSCVFFVGTLWHGGGANNTDRERLA 224
Query 214 LTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELIGYGLYAGKMGRIDWRPPADYLDAD 273
+T +C ++R LSI R++ R ++ ++GY ++ +G +D P L+ +
Sbjct 225 VTAQYCQPWLRPMEAYTLSISRDIARAVSDDMRRMLGYSIHPPFVGNVDGLHPLRLLEVE 284
>gi|254776406|ref|ZP_05217922.1| phytanoyl-CoA dioxygenase (PhyH) family protein [Mycobacterium
avium subsp. avium ATCC 25291]
Length=287
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/181 (38%), Positives = 102/181 (57%), Gaps = 0/181 (0%)
Query 93 HPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCDDEMYPLPRPHQPLLCNALIALC 152
H ++L V++ +L + LLS N PG AQ H DD YP+PRP PL + A+
Sbjct 104 HARVLAVLDRLLMPNYLLSALQAINIQPGEAAQLAHHDDGFYPVPRPRAPLAAATIWAID 163
Query 153 DFTADNGATQVVPGSHRWPERPSPPYPEGKPVEINAGDALIWNGSLWHTAAANRTDAPRP 212
+FTADNGAT + PGSHRW +R P E PV + AG +++ G+LWH AN TD R
Sbjct 164 EFTADNGATVLYPGSHRWGKRRPGPDDEAIPVVMPAGSCVLFVGTLWHGGGANTTDRDRL 223
Query 213 ALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELIGYGLYAGKMGRIDWRPPADYLDA 272
A+T +C ++R LS+PR++ R ++ ++GY ++ +G +D P L+
Sbjct 224 AVTAQYCQPWLRPMEAFTLSVPRDIARTVSDDIRRMLGYSIHPPFVGAVDGLHPLRLLEM 283
Query 273 D 273
+
Sbjct 284 E 284
>gi|164511453|emb|CAN89654.1| hypothetical protein [Streptomyces collinus]
Length=281
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/262 (32%), Positives = 126/262 (49%), Gaps = 32/262 (12%)
Query 5 SSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLARPGH 64
+ ++R+ +D+ G VVE+ LD D+ A D + L + G+
Sbjct 13 ADLDRVCSLLDQHGAVVVEEFLDPDTRQALWTD-----------------LGPALEKFGY 55
Query 65 VPVDRVDHDWVRIDNLLLHGTRYEALPVHPKLL---------PVIEGVLGRDCLLS--WC 113
D H R+ +L A+ +HP L PV G+ +S
Sbjct 56 GDNDFSGHKTKRMSSLFARSRHMAAVALHPLFLGAARRLIQQPVPVWFSGQQVNISPNIQ 115
Query 114 MTSNQL----PGAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHR 169
+++ Q+ PG AQ LH DD + P P ++A+ DFTA+NGAT +PGSHR
Sbjct 116 VSATQVIQIWPGEGAQWLHRDDTSHLRPYPAPTTRVQVMVAMTDFTAENGATMTIPGSHR 175
Query 170 WPERPSPPYPEGKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQ 229
W + +P E P E+ AG ALIW G L+H N + PR LT+++ G +RQ+ NQ
Sbjct 176 WDDERAPQRDEAVPAEMPAGSALIWLGGLYHGGGRNASTEPRTGLTLSYIAGNMRQEENQ 235
Query 230 QLSIPRELVRCFEPRLQELIGY 251
L++P ++VR + LQ L+GY
Sbjct 236 YLAVPMDVVREYPEELQRLLGY 257
>gi|296169237|ref|ZP_06850890.1| phytanoyl-CoA dioxygenase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896135|gb|EFG75802.1| phytanoyl-CoA dioxygenase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=287
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/187 (38%), Positives = 103/187 (56%), Gaps = 0/187 (0%)
Query 76 RIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCDDEMYP 135
RI +LL + + +P++L V++ +L + LLS N PG AQ H DD YP
Sbjct 87 RIYSLLSRTRVCDGIVDNPRVLAVLDRLLMPNYLLSALQAINIQPGEAAQLAHHDDGFYP 146
Query 136 LPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPEGKPVEINAGDALIWN 195
+PRP PL + A+ DFTADNGAT + PGSHRW +R P + PV + AG + +
Sbjct 147 VPRPRDPLAAATIWAIDDFTADNGATVLYPGSHRWGKRRPGPGDQAMPVVMPAGSCVFFV 206
Query 196 GSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELIGYGLYA 255
G+LWH AN TD R A+T +C ++R LSI R+ R ++ ++GY ++
Sbjct 207 GTLWHGGGANSTDRDRLAITAQYCQPWLRPMEAFTLSIARDTARAVSDDIRRMLGYSIHP 266
Query 256 GKMGRID 262
+G +D
Sbjct 267 PFVGAVD 273
>gi|254821154|ref|ZP_05226155.1| phytanoyl-CoA dioxygenase (PhyH) family protein [Mycobacterium
intracellulare ATCC 13950]
Length=287
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/269 (31%), Positives = 128/269 (48%), Gaps = 30/269 (11%)
Query 2 TQSSSVERLVGE-----IDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVV 56
T SS++ + E +D GY + E++L A+ A +
Sbjct 27 TGGSSIDSAIAEADMAALDRDGYVIWENLLSAEECAH----------------------I 64
Query 57 KGLARP--GHVPVDRVDHDWV-RIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWC 113
+ RP GH + + RI ++L + L HP++L ++ +L + LLS
Sbjct 65 RQTVRPWLGHTGRNSFEGRRTQRIYSVLSRTRACDRLVDHPRVLAALDRLLMPNYLLSAL 124
Query 114 MTSNQLPGAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPER 173
N PG AQ H DD YP+PRP PL + A+ DFTADNGAT + PGSHRW +R
Sbjct 125 QAINIQPGEAAQLAHHDDGFYPIPRPRAPLAAATIWAIDDFTADNGATVLYPGSHRWGKR 184
Query 174 PSPPYPEGKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSI 233
E PV + AG + + G+LWH AN T R A+T +C ++R LS+
Sbjct 185 RPDSDDEALPVVMPAGSCVFFVGTLWHGGGANNTAHERLAITAQYCEPWLRPMEAYTLSV 244
Query 234 PRELVRCFEPRLQELIGYGLYAGKMGRID 262
R++ R ++ ++GY ++ +G +D
Sbjct 245 SRDIARTVSDDIRRMLGYSIHPPFVGNVD 273
>gi|124006461|ref|ZP_01691294.1| phytanoyl-CoA dioxygenase (PhyH) family [Microscilla marina ATCC
23134]
gi|123987874|gb|EAY27554.1| phytanoyl-CoA dioxygenase (PhyH) family [Microscilla marina ATCC
23134]
Length=290
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/264 (29%), Positives = 125/264 (48%), Gaps = 22/264 (8%)
Query 11 VGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLARPGHVPVDRV 70
+ I+E GY ++ DVL ++ + RL G V +
Sbjct 47 IKSIEEKGYIIIPDVLSTAEISHIKQEANRL--------------------LGPVGRNTF 86
Query 71 DHDWVRIDNLLLHGTR-YEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHC 129
+ + + L TR ++ L HP+++ +++ + + LLS C N LPG +Q LH
Sbjct 87 EGKYTQRLYASLEKTRAFDRLVDHPRIMAILDRIFSPNYLLSQCQVINILPGEASQALHP 146
Query 130 DDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPEG-KPVEINA 188
DD Y + RP L + A+ DFT NGAT+V+P SH+W P + P + A
Sbjct 147 DDGFYRIARPRPELSAATIWAIDDFTETNGATRVIPHSHQWETDRVPQQTDDIFPAVMKA 206
Query 189 GDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQEL 248
G L + G+ WH AN++++ R A+T +C ++R Q N LSI ++ V+ ++ +
Sbjct 207 GSVLFYPGTFWHGGGANKSESARMAITCQYCQPYLRTQENFFLSISKDTVKAVSEDIKRM 266
Query 249 IGYGLYAGKMGRIDWRPPADYLDA 272
+GY ++ MG + P L+
Sbjct 267 LGYSIHPPFMGMTNGMHPKRVLEG 290
>gi|156055700|ref|XP_001593774.1| hypothetical protein SS1G_05202 [Sclerotinia sclerotiorum 1980]
gi|154702986|gb|EDO02725.1| hypothetical protein SS1G_05202 [Sclerotinia sclerotiorum 1980
UF-70]
Length=322
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/261 (29%), Positives = 127/261 (49%), Gaps = 13/261 (4%)
Query 6 SVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLARPGHV 65
SV+ L+ + E GY ++ + + V ++ RLE T+ A + + G
Sbjct 48 SVQNLIDHVLEHGYVILPKIFTPEQVELANSEVARLE----TIEAGPAALAGRNSFEGF- 102
Query 66 PVDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQ 125
R+ L ++ P+HP +L + + L + L++ T PG AQ
Sbjct 103 -------KTGRVYALADKSRAFDRFPIHPTVLALNDYFLQPNYLINSLHTVVIYPGQTAQ 155
Query 126 RLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPEGKPVE 185
+HCDD + LPRP + +++ DFTA+NGAT V+PGSH W + P E PV
Sbjct 156 SIHCDDGLIALPRPRPLIGVGTMVSFDDFTAENGATSVIPGSHLWSDDRIPTREEMIPVI 215
Query 186 INAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRL 245
+ AG + + +LWH+ AN +D PR ++T+ +C ++R N +++ + + RL
Sbjct 216 MPAGSMVYFLNTLWHSGGANTSDKPRRSITVQYCQPWIRTYENMTIAMGWDDLDKVPERL 275
Query 246 QELIGYGLYAGKMGRIDWRPP 266
L+G+ + MG +D R P
Sbjct 276 LRLMGFSTH-DFMGYVDGRSP 295
>gi|109900071|ref|YP_663326.1| phytanoyl-CoA dioxygenase [Pseudoalteromonas atlantica T6c]
gi|109702352|gb|ABG42272.1| Phytanoyl-CoA dioxygenase [Pseudoalteromonas atlantica T6c]
Length=285
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/262 (29%), Positives = 121/262 (47%), Gaps = 25/262 (9%)
Query 13 EIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLARPGHVPVDRVDH 72
++++ GY V+E+VL +D + T VK P R
Sbjct 44 QVEKNGYIVIENVLSSDEI----------------------TTVKNAILPLLNETGRNSF 81
Query 73 DWVRIDNL--LLHGTR-YEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHC 129
+ + L +L+ TR + L HP++L +++ + + LLS N LPG Q LH
Sbjct 82 EGYKTQRLYGVLNKTRALDRLVDHPRILALLDKLFMPNYLLSQLQVINLLPGESGQPLHF 141
Query 130 DDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPEGKPVEINAG 189
DD YP+ RP PL + A+ DFT NGAT +VP SH W + P + K + AG
Sbjct 142 DDGFYPISRPRAPLGAATIWAIDDFTQSNGATVIVPNSHTWDDNQKPTAEQAKSAVMKAG 201
Query 190 DALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELI 249
L + G+ WH AN + R A+T +C ++R Q N L P +V ++ ++
Sbjct 202 SVLFYPGTFWHGGGANHSSGNRLAVTCQYCEPWLRTQENYFLGTPLNVVADLSEDIRRML 261
Query 250 GYGLYAGKMGRIDWRPPADYLD 271
G+ ++ +G ++ P L+
Sbjct 262 GFSIHPPFIGMVNGMHPKRLLE 283
>gi|154297991|ref|XP_001549420.1| hypothetical protein BC1G_12148 [Botryotinia fuckeliana B05.10]
gi|150858275|gb|EDN33467.1| hypothetical protein BC1G_12148 [Botryotinia fuckeliana B05.10]
Length=311
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/266 (28%), Positives = 130/266 (49%), Gaps = 17/266 (6%)
Query 3 QSSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLER--ELPTVIANSTTVVKGLA 60
+ +SV+ L+ + E GY ++ ++ + V ++ RLE P +A + +G
Sbjct 34 KDASVQHLIDHVLEHGYVILPNIFTPEQVEIANSEVARLETLDAGPAAVAGRN-LFEGFK 92
Query 61 RPGHVPVDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLP 120
R+ L ++ P+HP +L + + L + L++ T P
Sbjct 93 TG-------------RVYALADKSRAFDHFPIHPTVLALNDYFLQPNYLITSLHTVVIYP 139
Query 121 GAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPE 180
G AQ +HCDD + LPRP + +++ DFTADNGAT V+PGSH W + P E
Sbjct 140 GQTAQAIHCDDGLIALPRPRPLIGTGTMVSFDDFTADNGATTVIPGSHLWSDERIPTREE 199
Query 181 GKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRC 240
PV + AG + + +LWH+ AN ++ R ++T+ +C ++R N +++ + +
Sbjct 200 MIPVIMPAGSMVYFLNTLWHSGGANTSNKARRSITVQYCQPWIRTFENMTIAMGWDDLDK 259
Query 241 FEPRLQELIGYGLYAGKMGRIDWRPP 266
RL +L+G+ + MG +D R P
Sbjct 260 VPERLLKLMGFSTH-DFMGYVDGRSP 284
>gi|40063111|gb|AAR37958.1| conserved hypothetical protein [uncultured marine bacterium 561]
Length=295
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/281 (32%), Positives = 121/281 (44%), Gaps = 40/281 (14%)
Query 14 IDEFGYTVVEDVLDADSVAAYLADTR-RLERELPTVIANSTTVVKGLARPGHVPVDRVDH 72
I E GYTV DVL + AY A + L+++L V +G
Sbjct 33 IQEEGYTVFTDVLSEAEITAYRAALQPWLDKDL-----CGRNVFEGTRSH---------- 77
Query 73 DWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCDDE 132
R+ +L + L HP L + E LG CLLS C+ +PG AQ H DD
Sbjct 78 ---RVYAMLAKNPIFAELVTHPLALTLAEHFLGESCLLSACLAIELMPGESAQPWHTDDG 134
Query 133 MYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPP--------------- 177
L PH+ L +A AL D T +NGAT+V+P SH W E+ P
Sbjct 135 HVSLKPPHEILGISAFWALSDTTVENGATEVLPRSHLWAEQDLPGALTAVDFDNTDGVDE 194
Query 178 ------YPEGKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQL 231
+ K V + AG ++ G LWH AN + R +T +C G++R L
Sbjct 195 AADHECHSAAKTVTLTAGSLMVARGDLWHRGGANLSGGSRLIVTPQYCAGWLRPLETMLL 254
Query 232 SIPRELVRCFEPRLQELIGYGLYAGKMGRIDWRPPADYLDA 272
++ V F RLQ L+GY ++A MG +D P L A
Sbjct 255 TMTPAQVAAFPERLQALLGYSIHAPFMGYVDGMHPKRILGA 295
>gi|169629677|ref|YP_001703326.1| hypothetical protein MAB_2591c [Mycobacterium abscessus ATCC
19977]
gi|169241644|emb|CAM62672.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=165
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/161 (39%), Positives = 93/161 (58%), Gaps = 1/161 (0%)
Query 117 NQLPGAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSP 176
N LPG AQ LH DD YP+PRP L + A+ DFTADNGAT ++ GSH W ++ +P
Sbjct 6 NILPGEQAQMLHTDDGFYPIPRPRAALGAATIWAIDDFTADNGATDIIAGSHLWGDK-TP 64
Query 177 PYPEGKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRE 236
+ PV + AG + + G+LWH AN++D+ R ALT +C ++R Q LS+ R+
Sbjct 65 KEADRTPVVMAAGSCVFFLGTLWHGGGANQSDSARLALTAQYCEPWLRPQEAFTLSMTRD 124
Query 237 LVRCFEPRLQELIGYGLYAGKMGRIDWRPPADYLDADRHPF 277
VR ++ ++GY ++ +G++D P L+ HP
Sbjct 125 TVRAVSEDIRRMLGYSIHPPFIGQVDGMHPKRLLEPGPHPI 165
>gi|119504015|ref|ZP_01626096.1| hypothetical protein MGP2080_09703 [marine gamma proteobacterium
HTCC2080]
gi|119460018|gb|EAW41112.1| hypothetical protein MGP2080_09703 [marine gamma proteobacterium
HTCC2080]
Length=279
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/281 (32%), Positives = 121/281 (44%), Gaps = 40/281 (14%)
Query 14 IDEFGYTVVEDVLDADSVAAYLADTR-RLERELPTVIANSTTVVKGLARPGHVPVDRVDH 72
I E GYTV DVL + AY A + L+++L V +G
Sbjct 17 IQEEGYTVFTDVLSEAEITAYRAALQPWLDKDL-----CGRNVFEGTRSH---------- 61
Query 73 DWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCDDE 132
R+ +L + L HP L + E LG CLLS C+ +PG AQ H DD
Sbjct 62 ---RVYAMLAKNPIFAELVTHPLALTLAEHFLGESCLLSACLAIELMPGESAQPWHTDDG 118
Query 133 MYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPP--------------- 177
L PH+ L +A AL D T +NGAT+V+P SH W E+ P
Sbjct 119 HVSLKPPHEILGISAFWALSDTTVENGATEVLPRSHLWAEQDLPGALTAVDFDNTDGVDE 178
Query 178 ------YPEGKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQL 231
+ K V + AG ++ G LWH AN + R +T +C G++R L
Sbjct 179 AADHECHSAAKTVTLTAGSLMVARGDLWHRGGANLSGGSRLIVTPQYCAGWLRPLETMLL 238
Query 232 SIPRELVRCFEPRLQELIGYGLYAGKMGRIDWRPPADYLDA 272
++ V F RLQ L+GY ++A MG +D P L A
Sbjct 239 TMTPAQVAAFPERLQALLGYSIHAPFMGYVDGMHPKRILGA 279
>gi|119478425|ref|ZP_01618410.1| hypothetical protein GP2143_06913 [marine gamma proteobacterium
HTCC2143]
gi|119448511|gb|EAW29758.1| hypothetical protein GP2143_06913 [marine gamma proteobacterium
HTCC2143]
Length=279
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/194 (37%), Positives = 106/194 (55%), Gaps = 3/194 (1%)
Query 76 RIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCDDE--M 133
R+ LL + HP +L +++ +L LLS + N PG +Q H DD
Sbjct 79 RVYALLAKAPVIADMVTHPDVLAIVDALLSPHYLLSAALAINVHPGETSQPFHVDDNEGA 138
Query 134 YPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPEGKPVEINAGDALI 193
LP+P L +A+ AL DFT NGAT+VVPGSH W + P E + V + AG AL+
Sbjct 139 MVLPKPRVALGVSAIWALDDFTTTNGATEVVPGSHLWADDREPQQHEIEQVIMPAGSALV 198
Query 194 WNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELIGYGL 253
+ GSL H AN + + R A+T +C+ ++RQ N L++P + + + R++EL+GY +
Sbjct 199 FAGSLIHRGGANVSASSRLAVTPQYCMPWLRQIENMVLAVPPSMAQQYSDRVRELLGYSI 258
Query 254 YA-GKMGRIDWRPP 266
G MG +D R P
Sbjct 259 VEPGFMGYVDGRHP 272
>gi|329898676|ref|ZP_08272438.1| hypothetical protein IMCC3088_645 [gamma proteobacterium IMCC3088]
gi|328920777|gb|EGG28232.1| hypothetical protein IMCC3088_645 [gamma proteobacterium IMCC3088]
Length=284
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/202 (38%), Positives = 110/202 (55%), Gaps = 12/202 (5%)
Query 85 TRYEALPVHPKLLPVIEGVLGRDC---LLSWCMTSNQLPGAVAQRLHCDDEMYPLPRPHQ 141
T A+ +HP V + +L +C L+ ++ PG+ Q +H D +++P
Sbjct 82 TFVNAVLLHPIFKLVGDQILLPNCSDYTLNLAHVLDRGPGSGDQLIHRDQDVWPRELTSA 141
Query 142 ---PLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPEGKPVEINAGDALIWNGSL 198
+ +LIAL ++TAD GAT+VVPGSHRWP P E E+ G A+I+ GS
Sbjct 142 IGGHVQFASLIALSEYTADMGATRVVPGSHRWPHDRVPKPEEIVIAEMAPGSAVIYLGST 201
Query 199 WHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELIGYGLY---- 254
H A +NRTDA R + +FC+G++R + N LSI RE VR R QEL+G+G++
Sbjct 202 LHGAGSNRTDAVRRGMHTSFCLGWLRTEENSYLSISRERVRKMSRRAQELLGFGVHDGIA 261
Query 255 --AGKMGRIDWRPPADYLDADR 274
G +G +D PAD L A R
Sbjct 262 KGEGFLGAVDNGIPADMLAAGR 283
>gi|240169800|ref|ZP_04748459.1| phytanoyl-CoA dioxygenase (PhyH) family protein [Mycobacterium
kansasii ATCC 12478]
Length=289
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/179 (37%), Positives = 98/179 (55%), Gaps = 0/179 (0%)
Query 93 HPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCDDEMYPLPRPHQPLLCNALIALC 152
HP+ L V++ +L + LLS N PG +Q LH DD YP+PRP L + A+
Sbjct 103 HPRPLAVLDRLLMPNYLLSALQVINIQPGESSQLLHFDDAFYPIPRPRPALGAATIWAID 162
Query 153 DFTADNGATQVVPGSHRWPERPSPPYPEGKPVEINAGDALIWNGSLWHTAAANRTDAPRP 212
DFTA NGAT V+P SHRW +R P K V + AG + + G+LWH AN T+A R
Sbjct 163 DFTAANGATVVIPASHRWDDRRPTPTDIRKSVIMPAGSCIFFLGTLWHGGGANNTEAARL 222
Query 213 ALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELIGYGLYAGKMGRIDWRPPADYLD 271
A+T +C ++R LS+ ++ + +Q ++GY ++ +G +D + P L+
Sbjct 223 AVTAQYCQPWLRPLEAFTLSVSTDIAKVVSADIQRMLGYSIHPPFVGAVDGQHPRRLLE 281
>gi|85375045|ref|YP_459107.1| hypothetical protein ELI_11090 [Erythrobacter litoralis HTCC2594]
gi|84788128|gb|ABC64310.1| hypothetical protein ELI_11090 [Erythrobacter litoralis HTCC2594]
Length=293
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/207 (36%), Positives = 99/207 (48%), Gaps = 20/207 (9%)
Query 76 RIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCDDEMYP 135
RI +L + L HP L E LGR LL C+ N LPG AQ H DD
Sbjct 77 RIYGMLAKDPVFADLVTHPLQLAFGERELGRSMLLYACLAINLLPGETAQPWHFDDSHCD 136
Query 136 LPRPHQPLLCNALIALCDFTADNGATQVVPGSHRW----PERPSPP-------------- 177
LPRP PL + +L + TA+NGAT+++PGSH W PE S P
Sbjct 137 LPRPRPPLSLSTFWSLTETTAENGATEIIPGSHLWGDERPEGASGPDDFLTGKTDKAGGA 196
Query 178 --YPEGKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPR 235
+P+ + G +I G+LWH AN + R +T FC G+ R Q L++P
Sbjct 197 GTHPDAIKATMPPGSLMIAKGTLWHRGGANTSHDRRLIVTPQFCKGWCRPLEQQLLAVPP 256
Query 236 ELVRCFEPRLQELIGYGLYAGKMGRID 262
+ R+QEL+GYG++ MG +D
Sbjct 257 QKAALLPERVQELLGYGIHPPFMGYVD 283
>gi|226362445|ref|YP_002780223.1| hypothetical protein ROP_30310 [Rhodococcus opacus B4]
gi|226240930|dbj|BAH51278.1| hypothetical protein [Rhodococcus opacus B4]
Length=297
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/172 (38%), Positives = 92/172 (54%), Gaps = 12/172 (6%)
Query 120 PGAVAQRLHCDDEMYPLPRPHQPL---LCNALIALCDFTADNGATQVVPGSHRWPERPSP 176
PG AQ LH DD ++ R H+ ++A+ DFTA+NG T VVPGSHRW + +P
Sbjct 124 PGEGAQPLHRDDSVWQW-RHHEGYNQARVQLMVAITDFTAENGGTMVVPGSHRWDDTRAP 182
Query 177 PYPEGKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRE 236
E P E+ AG ALIW G +H N +D+ R T+ F +GF+RQ+ N L+ P E
Sbjct 183 KVDEALPTEMAAGSALIWVGGTYHGGGTNNSDSSRIGFTLGFDLGFLRQEENAFLTYPPE 242
Query 237 LVRCFEPRLQELIGYGL------YAGKMGRIDWRPPADYLDADRHPFLDAVA 282
+ R F+ +Q+L+GY + G G + P L D PF ++ A
Sbjct 243 IARTFDEDIQKLLGYSTCPPGTGFVGHEGAM--ADPIFLLKDDAAPFTNSYA 292
>gi|318075467|ref|ZP_07982799.1| hypothetical protein SSA3_01792 [Streptomyces sp. SA3_actF]
Length=296
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/171 (37%), Positives = 93/171 (55%), Gaps = 8/171 (4%)
Query 120 PGAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYP 179
PG Q LH DD M+ P P ++AL DFT+ NGAT V+PGSH W + +P Y
Sbjct 128 PGQGRQPLHRDDAMHLWRHPGPPCRLQLMLALNDFTSANGATLVIPGSHHWDDERAPTYA 187
Query 180 EGKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVR 239
E P + AG AL+W G ++H AN TD+PR +L++ +G +RQ+ NQ L++PRE V
Sbjct 188 EAVPAVMPAGSALLWPGGVYHGGGANTTDSPRYSLSVALDLGNLRQEENQYLAVPRETVM 247
Query 240 CFEPRLQELIGYGLYAGKMGRIDWRPPADYLDADRHPFLDAVADRLQTSVR 290
+Q L+G+ +G+++ + P H L+ + L T R
Sbjct 248 TLPEEVQRLLGWDRCPPGLGQVETQDP--------HLLLERTQEELATRPR 290
>gi|302519381|ref|ZP_07271723.1| phytanoyl-CoA dioxygenase [Streptomyces sp. SPB78]
gi|318056442|ref|ZP_07975165.1| hypothetical protein SSA3_00762 [Streptomyces sp. SA3_actG]
gi|333026791|ref|ZP_08454855.1| putative phytanoyl-CoA dioxygenase [Streptomyces sp. Tu6071]
gi|302428276|gb|EFL00092.1| phytanoyl-CoA dioxygenase [Streptomyces sp. SPB78]
gi|332746643|gb|EGJ77084.1| putative phytanoyl-CoA dioxygenase [Streptomyces sp. Tu6071]
Length=293
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/171 (37%), Positives = 93/171 (55%), Gaps = 8/171 (4%)
Query 120 PGAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYP 179
PG Q LH DD M+ P P ++AL DFT+ NGAT V+PGSH W + +P Y
Sbjct 125 PGQGRQPLHRDDAMHLWRHPGPPCRLQLMLALNDFTSANGATLVIPGSHHWDDERAPTYA 184
Query 180 EGKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVR 239
E P + AG AL+W G ++H AN TD+PR +L++ +G +RQ+ NQ L++PRE V
Sbjct 185 EAVPAVMPAGSALLWPGGVYHGGGANTTDSPRYSLSVALDLGNLRQEENQYLAVPRETVM 244
Query 240 CFEPRLQELIGYGLYAGKMGRIDWRPPADYLDADRHPFLDAVADRLQTSVR 290
+Q L+G+ +G+++ + P H L+ + L T R
Sbjct 245 TLPEEVQRLLGWDRCPPGLGQVETQDP--------HLLLERTQEELATRPR 287
>gi|83945008|ref|ZP_00957374.1| hypothetical protein OA2633_10274 [Oceanicaulis alexandrii HTCC2633]
gi|83851790|gb|EAP89645.1| hypothetical protein OA2633_10274 [Oceanicaulis alexandrii HTCC2633]
Length=277
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/193 (37%), Positives = 99/193 (52%), Gaps = 2/193 (1%)
Query 81 LLHGTR-YEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCDDEMYPLPRP 139
LL TR + L HP++L +++ L LLS C+ N PG Q H DD YP RP
Sbjct 85 LLAKTRALDPLIAHPQILGLLKARLHAQPLLSACLGINIGPGETPQMPHADDGFYPDMRP 144
Query 140 HQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPE-GKPVEINAGDALIWNGSL 198
+ + A FT DNGAT+ PGSH W P + +P + GDAL+++G L
Sbjct 145 DARHGLSVIWAFDPFTRDNGATRTWPGSHLWRSGREPEDTDVWRPAVMEPGDALVFHGGL 204
Query 199 WHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELIGYGLYAGKM 258
WH N T R ALT +C ++R Q N L++P ++VR + L L+GY ++ M
Sbjct 205 WHAGGENATQQGRLALTAQYCAPWLRTQENMSLAVPPQIVRTLKAPLPSLLGYQIHPPFM 264
Query 259 GRIDWRPPADYLD 271
G ++ P LD
Sbjct 265 GHVNGMHPNRLLD 277
>gi|78059906|ref|YP_366481.1| phytanoyl-CoA dioxygenase [Burkholderia sp. 383]
gi|77964456|gb|ABB05837.1| Phytanoyl-CoA dioxygenase [Burkholderia sp. 383]
Length=292
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/147 (41%), Positives = 89/147 (61%), Gaps = 5/147 (3%)
Query 119 LPGAVAQRLHCDDEMYPLPRPH--QPLLCNALIALCDFTADNGATQVVPGSHRWPERPSP 176
LPG Q LH DD ++ P+ + ++A+ DFTA+NGAT V+PGSH+W + SP
Sbjct 123 LPGQGLQPLHRDDSVWLWRHPNYGREARFQVMVAVSDFTAENGATLVIPGSHKWDDERSP 182
Query 177 PYPEGKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRE 236
E E++AGDAL + GS +H N +DAPR LT+++ + +RQ+ NQ L++P E
Sbjct 183 KQEEAVSAEMSAGDALFFIGSTYHGGGKNTSDAPRTGLTMSYDLAILRQEENQYLTLPIE 242
Query 237 LVRCFEPRLQELIG--YG-LYAGKMGR 260
V+ + LQ L+G YG +AG + R
Sbjct 243 RVKRYPEELQRLLGWTYGTTFAGFVER 269
>gi|212544946|ref|XP_002152627.1| integral membrane protein, putative [Penicillium marneffei ATCC
18224]
gi|210065596|gb|EEA19690.1| integral membrane protein, putative [Penicillium marneffei ATCC
18224]
Length=604
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/247 (32%), Positives = 119/247 (49%), Gaps = 20/247 (8%)
Query 18 GYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLARPG-HVPVDRVDHDWVR 76
GY ++++L + V + + R+ E P R G H+ R D VR
Sbjct 36 GYVALDNLLTEEDVQSLREEVDRMTGENP--------------RTGRHMFEGR---DTVR 78
Query 77 IDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCDDEMYPL 136
I +LL +++ + ++L + E L + +S T PG Q H DD L
Sbjct 79 IYSLLNKSRKFDKCCLFDRVLALNEYFLMKGYTISATSTIQINPGEKPQLFHHDDGYTYL 138
Query 137 PRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPEGKPVEINAGDALIWNG 196
PRP P+ +IA+ DFTA+NGAT +VPGSH W + P E P+ AG + G
Sbjct 139 PRPRPPMGVAIMIAIDDFTAENGATLMVPGSHLWDSKRRPTMEEAVPMVGKAGTVFYFLG 198
Query 197 SLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSI-PRELVRCFEPRLQELIGYGLYA 255
+ WH +N T+ PR A TI +C ++R NQ L++ PR L + +++GYGL
Sbjct 199 TTWHCGGSNMTNKPRRAATIQYCQPYIRAVENQFLAVDPRRLSEI-PDDIVKMMGYGLQK 257
Query 256 GKMGRID 262
+G +D
Sbjct 258 PFIGYVD 264
>gi|119505785|ref|ZP_01627852.1| hypothetical protein MGP2080_02500 [marine gamma proteobacterium
HTCC2080]
gi|119458352|gb|EAW39460.1| hypothetical protein MGP2080_02500 [marine gamma proteobacterium
HTCC2080]
Length=288
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/187 (34%), Positives = 96/187 (52%), Gaps = 3/187 (1%)
Query 76 RIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDC---LLSWCMTSNQLPGAVAQRLHCDDE 132
R+ + H ++ L HP +L + GVLG C + LPG AQ LH DD
Sbjct 89 RVGGIAEHSEEFQTLFTHPDVLALANGVLGPRCENIRVGSTTAIEILPGEDAQILHADDT 148
Query 133 MYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPEGKPVEINAGDAL 192
+YP + + L AL DFT +NGAT+V+PGSH P P E+ G +
Sbjct 149 IYPKEYLPFEVQISVLWALDDFTEENGATRVIPGSHLSGPHPDDAEQTSYPAEMPRGSMV 208
Query 193 IWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELIGYG 252
++ GS H ANR+D PR AL + +G++RQ+ NQ L++P + V ++ L+G+
Sbjct 209 VYLGSTLHGGGANRSDKPRRALVNTYALGWLRQEENQYLTLPSDAVAQQSDDVRRLLGFQ 268
Query 253 LYAGKMG 259
++ +G
Sbjct 269 VHGANLG 275
>gi|342876117|gb|EGU77776.1| hypothetical protein FOXB_11706 [Fusarium oxysporum Fo5176]
Length=280
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/254 (30%), Positives = 119/254 (47%), Gaps = 15/254 (5%)
Query 2 TQSSSVERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLER--ELPTVIANSTTVVKGL 59
T + +++L+ + GY V+ + V A+ RRL ++ +GL
Sbjct 25 TVNPHLQKLIDQTLLNGYVVIPNAFTNAEVEEANAELRRLASSPHAGPAVSGGRNKFEGL 84
Query 60 ARPGHVPVDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQL 119
R + RI LL ++ +HP +L + E L + LL+ + N
Sbjct 85 ---------RTN----RIYALLNKSRVFDKFVLHPDVLGLNEYFLDQGFLLNAFHSINIQ 131
Query 120 PGAVAQRLHCDDEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYP 179
PG Q +H DD +PRPH+P ++AL +T NGAT VVP SH W P
Sbjct 132 PGEAPQTIHHDDGFITIPRPHRPFGTAIMVALDSYTKTNGATVVVPKSHTWDSSHVPTPG 191
Query 180 EGKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVR 239
E +PV + G + + G+LWH N ++ R ALT+ +C +VR NQ L++ E +
Sbjct 192 EAEPVIMERGSLVYFLGTLWHGGGKNVSEKERRALTVQYCQPWVRPLENQILAVDWEKLD 251
Query 240 CFEPRLQELIGYGL 253
PRL +++GY +
Sbjct 252 QLPPRLVDMLGYQM 265
>gi|254515517|ref|ZP_05127577.1| phytanoyl-CoA dioxygenase (PhyH) family protein [gamma proteobacterium
NOR5-3]
gi|219675239|gb|EED31605.1| phytanoyl-CoA dioxygenase (PhyH) family protein [gamma proteobacterium
NOR5-3]
Length=301
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/176 (36%), Positives = 91/176 (52%), Gaps = 1/176 (0%)
Query 92 VHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCDDEMYPLPRPHQPLLCNALIAL 151
HP +L ++ +L + LLS N L G+ AQ LH DD YP P P L + A+
Sbjct 113 THPLILAHLDRLLKPNYLLSQAQVINILSGSPAQPLHIDDGFYPWPSPRPALSVATVFAI 172
Query 152 CDFTADNGATQVVPGSHRWPERPSPPYPEGKPVEIN-AGDALIWNGSLWHTAAANRTDAP 210
DFT DNGAT +PGSH W E SP + + + AG +++ G+LWH AN +
Sbjct 173 DDFTEDNGATVAIPGSHLWEEGRSPQDGDHRVKAVMPAGSCILFMGNLWHGGGANYSGNS 232
Query 211 RPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELIGYGLYAGKMGRIDWRPP 266
R A T +C ++R Q N LS+ RE ++ L+GY ++ MG ++ P
Sbjct 233 RLAFTGQYCEPYLRTQENYFLSVSRETAASVSEDMRRLLGYSIHPPFMGMVNGMHP 288
>gi|107101664|ref|ZP_01365582.1| hypothetical protein PaerPA_01002708 [Pseudomonas aeruginosa
PACS2]
Length=239
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/158 (38%), Positives = 89/158 (57%), Gaps = 2/158 (1%)
Query 107 DCLLSWCMTSNQLPGAVAQRLHCDD--EMYPLPRPHQPLLCNALIALCDFTADNGATQVV 164
D LS PG Q LH DD ++ P+ + ++A+ DFT +NGAT+V+
Sbjct 58 DIQLSMTQAIQIGPGQGLQPLHRDDATSLWRHPQYGREARLQLMLAITDFTEENGATRVI 117
Query 165 PGSHRWPERPSPPYPEGKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVR 224
PGSH+W + P E E+ AG AL+W GS++H ANR+DAPR LT+ + + F+R
Sbjct 118 PGSHQWDDERMPTQEETIGAEMKAGTALLWLGSVYHGGGANRSDAPRTGLTMAYDLAFLR 177
Query 225 QQVNQQLSIPRELVRCFEPRLQELIGYGLYAGKMGRID 262
+ N LSIP E VR ++Q L+G+ + +G ++
Sbjct 178 LEENHFLSIPVERVRQLPSQMQRLLGWSASSTLLGWVE 215
>gi|320034995|gb|EFW16937.1| phytanoyl-CoA dioxygenase [Coccidioides posadasii str. Silveira]
Length=299
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/252 (29%), Positives = 117/252 (47%), Gaps = 16/252 (6%)
Query 11 VGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLARPGHVPVDRV 70
V + + GY V+E+ + A A+ RL P + NS +G
Sbjct 28 VEHVLQHGYVVIENCFSKEEAEAAKAEIDRLSGSAPMIGRNS---FEGF----------- 73
Query 71 DHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCD 130
+ RI +LL ++ + P++L + + L ++ T PG Q +H D
Sbjct 74 --NTNRIYSLLNKTREFDKFAILPRVLALNDFFLDPGYNITSFHTIQINPGEKNQDMHHD 131
Query 131 DEMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPEGKPVEINAGD 190
D +PRP PL +IA DFTA+NGAT V+PGSH W Y E P+ AG
Sbjct 132 DAFCHVPRPRLPLGAAIIIAFDDFTAENGATGVIPGSHTWGADRRGKYEETVPMVCPAGS 191
Query 191 ALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELIG 250
+ + G+ WH AN + PR + T+ +C ++R NQ L++ ++ PR+ E++G
Sbjct 192 VVYFIGTTWHCGGANNSSKPRKSATVQYCQPYIRPIENQILAVDPRKLKEIPPRIVEMMG 251
Query 251 YGLYAGKMGRID 262
Y ++ +G D
Sbjct 252 YRIHRPFIGYAD 263
>gi|313110900|ref|ZP_07796743.1| hypothetical protein PA39016_002840009 [Pseudomonas aeruginosa
39016]
gi|310883245|gb|EFQ41839.1| hypothetical protein PA39016_002840009 [Pseudomonas aeruginosa
39016]
Length=290
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/158 (38%), Positives = 89/158 (57%), Gaps = 2/158 (1%)
Query 107 DCLLSWCMTSNQLPGAVAQRLHCDD--EMYPLPRPHQPLLCNALIALCDFTADNGATQVV 164
D LS PG Q LH DD ++ P+ + ++A+ DFT +NGAT+V+
Sbjct 109 DIQLSMTQAIQIGPGQGLQPLHRDDATSLWRHPQYGREARLQLMLAITDFTEENGATRVI 168
Query 165 PGSHRWPERPSPPYPEGKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVR 224
PGSH+W + P E E+ AG AL+W GS++H ANR+DAPR LT+ + + F+R
Sbjct 169 PGSHQWDDERMPTQEETIGAEMKAGTALLWLGSVYHGGGANRSDAPRTGLTMAYDLAFLR 228
Query 225 QQVNQQLSIPRELVRCFEPRLQELIGYGLYAGKMGRID 262
+ N LSIP E VR ++Q L+G+ + +G ++
Sbjct 229 LEENHFLSIPVERVRQLPAQMQRLLGWSASSTLLGWVE 266
>gi|294011955|ref|YP_003545415.1| protein involved in biosynthesis of mitomycin antibiotics/polyketide
fumonisin [Sphingobium japonicum UT26S]
gi|292675285|dbj|BAI96803.1| protein involved in biosynthesis of mitomycin antibiotics/polyketide
fumonisin [Sphingobium japonicum UT26S]
Length=340
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/191 (38%), Positives = 101/191 (53%), Gaps = 13/191 (6%)
Query 77 IDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCDDEMYPL 136
+ NLL G + L +HP + VIE LG LLS + + PG++AQ LH D
Sbjct 98 VYNLLNKGEVFSRLLLHPLVDKVIEHSLGESFLLSAFNSHSTKPGSLAQGLHLDQMYIGA 157
Query 137 PRPHQPLLCNALIALCDFTADNGATQVVPGSHRWP-ERPSPPYPEGKPVEIN-------- 187
P P L+CNA+ L DFT +NG T+V+PGSHRW E + Y +P +N
Sbjct 158 PTP-MALVCNAVWMLDDFTEENGGTRVIPGSHRWSAEAVAAAYQGLEPASVNAPGTIASQ 216
Query 188 --AGDALIWNGSLWHTAAANRT-DAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPR 244
AG ++++G L H A +N T D R AL +C F+RQ N LSI ++ F P
Sbjct 217 APAGTCMVFDGRLLHGAGSNCTSDQARHALFAYYCRPFIRQLENPFLSIDDSVMMSFSPE 276
Query 245 LQELIGYGLYA 255
+++ +GY +A
Sbjct 277 IRKQLGYQSWA 287
>gi|254240660|ref|ZP_04933982.1| hypothetical protein PA2G_01319 [Pseudomonas aeruginosa 2192]
gi|12698398|gb|AAK01512.1| hypothetical protein [Pseudomonas aeruginosa]
gi|126194038|gb|EAZ58101.1| hypothetical protein PA2G_01319 [Pseudomonas aeruginosa 2192]
Length=295
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/158 (38%), Positives = 89/158 (57%), Gaps = 2/158 (1%)
Query 107 DCLLSWCMTSNQLPGAVAQRLHCDD--EMYPLPRPHQPLLCNALIALCDFTADNGATQVV 164
D LS PG Q LH DD ++ P+ + ++A+ DFT +NGAT+V+
Sbjct 114 DIQLSMTQAIQIGPGQGLQPLHRDDATSLWRHPQYGREARLQLMLAITDFTEENGATRVI 173
Query 165 PGSHRWPERPSPPYPEGKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVR 224
PGSH+W + P E E+ AG AL+W GS++H ANR+DAPR LT+ + + F+R
Sbjct 174 PGSHQWDDERMPTQEETIGAEMKAGTALLWLGSVYHGGGANRSDAPRTGLTMAYDLAFLR 233
Query 225 QQVNQQLSIPRELVRCFEPRLQELIGYGLYAGKMGRID 262
+ N LSIP E VR ++Q L+G+ + +G ++
Sbjct 234 LEENHFLSIPVERVRQLPSQMQRLLGWSASSTLLGWVE 271
>gi|218891810|ref|YP_002440677.1| hypothetical protein PLES_30881 [Pseudomonas aeruginosa LESB58]
gi|218772036|emb|CAW27815.1| hypothetical protein PLES_30881 [Pseudomonas aeruginosa LESB58]
Length=290
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/158 (38%), Positives = 89/158 (57%), Gaps = 2/158 (1%)
Query 107 DCLLSWCMTSNQLPGAVAQRLHCDD--EMYPLPRPHQPLLCNALIALCDFTADNGATQVV 164
D LS PG Q LH DD ++ P+ + ++A+ DFT +NGAT+V+
Sbjct 109 DIQLSMTQAIQIGPGQGLQPLHRDDATSLWRHPQYGREARLQLMLAITDFTEENGATRVI 168
Query 165 PGSHRWPERPSPPYPEGKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVR 224
PGSH+W + P E E+ AG AL+W GS++H ANR+DAPR LT+ + + F+R
Sbjct 169 PGSHQWDDERMPTQEETIGAEMKAGTALLWLGSVYHGGGANRSDAPRTGLTMAYDLAFLR 228
Query 225 QQVNQQLSIPRELVRCFEPRLQELIGYGLYAGKMGRID 262
+ N LSIP E VR ++Q L+G+ + +G ++
Sbjct 229 LEENHFLSIPVERVRQLPSQMQRLLGWSASSTLLGWVE 266
>gi|254282313|ref|ZP_04957281.1| phytanoyl-CoA dioxygenase [gamma proteobacterium NOR51-B]
gi|219678516|gb|EED34865.1| phytanoyl-CoA dioxygenase [gamma proteobacterium NOR51-B]
Length=262
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/191 (35%), Positives = 95/191 (50%), Gaps = 9/191 (4%)
Query 75 VRIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCL---LSWCMTSNQLPGAVAQRLHCDD 131
+R+ +L L HP +L V + VL R CL + C LPG Q LH DD
Sbjct 63 LRLSGILALSRSSADLIAHPLVLKVADAVLLRHCLNYRIGSCTAIEILPGEKDQVLHRDD 122
Query 132 EMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPEGKPVEINAGDA 191
YPL P +A+ L DFT +NGAT+VV GSH + P + + + G
Sbjct 123 SFYPLRIPDVEFQISAMWPLDDFTLENGATRVVMGSHDLRDIDDIPESDAEQAPMQRGSV 182
Query 192 LIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELIGY 251
L + G+ H AN +D PR L + +G++RQ+ NQ L+IPRE+ + ++ L+GY
Sbjct 183 LFYLGATVHGGGANLSDKPRSGLINTYALGWLRQEENQYLTIPREIADSYPDHVRRLMGY 242
Query 252 ------GLYAG 256
G+Y G
Sbjct 243 QSHNDLGVYPG 253
>gi|239502570|ref|ZP_04661880.1| phytanoyl-CoA dioxygenase [Acinetobacter baumannii AB900]
Length=291
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/145 (39%), Positives = 83/145 (58%), Gaps = 2/145 (1%)
Query 120 PGAVAQRLHCDDE--MYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPP 177
PG AQ LH DD M+ P + + A+ DFT +NGAT+V+P SH W ++ P
Sbjct 124 PGQKAQPLHRDDTVWMWRHPVYGREARVQIMFAVTDFTEENGATRVIPASHLWDDQRVPK 183
Query 178 YPEGKPVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPREL 237
E E+ AGDALIW GS +H AN + PR LT+++ +GF+RQ+ N LS+ E
Sbjct 184 EDETIAAEMKAGDALIWIGSTYHGGGANVSQEPRIGLTMSYDLGFLRQEENHYLSLSSET 243
Query 238 VRCFEPRLQELIGYGLYAGKMGRID 262
V+ F L+ L+G+ + +G ++
Sbjct 244 VKNFPDELKGLLGWNMSTTFVGFVE 268
>gi|291442185|ref|ZP_06581575.1| phytanoyl-CoA dioxygenase [Streptomyces ghanaensis ATCC 14672]
gi|291345080|gb|EFE72036.1| phytanoyl-CoA dioxygenase [Streptomyces ghanaensis ATCC 14672]
Length=300
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/271 (32%), Positives = 122/271 (46%), Gaps = 27/271 (9%)
Query 7 VERLVGEIDEFGYTVVEDVLDADSVAAYLADTRRLERELPTVIANSTTVVKGLARPGHVP 66
+ ++ +DE GY VVE+VL ++V A L++ P P
Sbjct 15 IGEVMQSLDENGYAVVENVLPHETVDALLSEMEPWIEATPF-------------GPDAFA 61
Query 67 VDRVDHDWVRIDNLLLHGTRYEALPVHPKLLPVIEGVL--GRDCLLSWCMTSNQLPGAVA 124
R R +L+ L VHP V VL + LS + PG+V+
Sbjct 62 GQRTK----RTGSLVARSATARDLIVHPLCKGVARRVLKSSTEFQLSQTQLISAYPGSVS 117
Query 125 QRLHCDD---EMYPLPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPEG 181
Q+LH D+ + +P H ++C AL DFT +NGAT+V PGS P E
Sbjct 118 QKLHKDELVWDFFPFAVDHH-VMCQFFWALTDFTEENGATRVAPGSDAID--PDDLREED 174
Query 182 K-PVEINAGDALIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRC 240
PVE++ G I+NG + H NR+D R L +++C G+VRQ+ NQ L P EL R
Sbjct 175 TIPVEMSKGSVFIFNGKVVHGGGTNRSDQVRQGLILSYCAGWVRQEENQYLVAPPELART 234
Query 241 FEPRLQELIGYGLYAGKMGRI-DWRPPADYL 270
F + ++IGY MG D P D L
Sbjct 235 FSEDVLKMIGYQQGCFAMGYAGDIEEPMDVL 265
>gi|4895124|gb|AAD32731.1| MmcH [Streptomyces lavendulae]
Length=254
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/194 (35%), Positives = 96/194 (50%), Gaps = 5/194 (2%)
Query 76 RIDNLLLHGTRYEALPVHPKLLPVIEGVLGRDCLLSWCMTSNQLPGAVAQRLHCDDEMYP 135
R+ +LL G +E P ++ ++E +LG LLS + PG LH D
Sbjct 62 RVFSLLNKGEEFEQNVQDPTVMLLMEEILGFGFLLSSTHANIAGPGGSRMHLHADQTFAR 121
Query 136 LPRPHQPLLCNALIALCDFTADNGATQVVPGSHRWPERPSPPYPEGKPVEIN----AGDA 191
P P PL+ N++ L DFT DNGAT++VPGSH +P EG + AG
Sbjct 122 PPWPPYPLVANSMWMLDDFTEDNGATRLVPGSHLLGRQPDYDRGEGNTETVAVCAPAGSV 181
Query 192 LIWNGSLWHTAAANRTDAPRPALTINFCVGFVRQQVNQQLSIPRELVRCFEPRLQELIGY 251
++++G LWH AN TD PR + +C G+VRQQ N + ++ P L+ L+GY
Sbjct 182 MVFDGRLWHQTGANTTDRPRHGILNYYCRGYVRQQQNFFSGLREDVATRATPELRRLLGY 241
Query 252 GLYAGKMGRIDWRP 265
Y +G D P
Sbjct 242 ENYF-SLGMTDGLP 254
Lambda K H
0.321 0.139 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 477082076112
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40