BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3635 Length=591 Score E Sequences producing significant alignments: (Bits) Value gi|15610771|ref|NP_218152.1| transmembrane protein [Mycobacteriu... 1151 0.0 gi|297636307|ref|ZP_06954087.1| hypothetical protein MtubK4_1937... 1150 0.0 gi|167968556|ref|ZP_02550833.1| conserved transmembrane protein ... 1149 0.0 gi|289572282|ref|ZP_06452509.1| transmembrane protein [Mycobacte... 1147 0.0 gi|254233133|ref|ZP_04926459.1| hypothetical protein TBCG_03558 ... 1139 0.0 gi|308379563|ref|ZP_07486767.2| conserved membrane protein [Myco... 1124 0.0 gi|340628600|ref|YP_004747052.1| hypothetical protein MCAN_36471... 1033 0.0 gi|118619384|ref|YP_907716.1| hypothetical protein MUL_4211 [Myc... 889 0.0 gi|240172954|ref|ZP_04751612.1| hypothetical protein MkanA1_2681... 875 0.0 gi|183985102|ref|YP_001853393.1| hypothetical protein MMAR_5134 ... 870 0.0 gi|296166698|ref|ZP_06849123.1| conserved hypothetical protein [... 862 0.0 gi|289571871|ref|ZP_06452098.1| conserved membrane protein [Myco... 857 0.0 gi|254819875|ref|ZP_05224876.1| hypothetical protein MintA_08119... 835 0.0 gi|41406527|ref|NP_959363.1| hypothetical protein MAP0429c [Myco... 832 0.0 gi|336460947|gb|EGO39830.1| hypothetical protein MAPs_36130 [Myc... 829 0.0 gi|342862020|ref|ZP_08718664.1| hypothetical protein MCOL_24135 ... 825 0.0 gi|254773492|ref|ZP_05215008.1| hypothetical protein MaviaA2_022... 823 0.0 gi|118467239|ref|YP_879802.1| hypothetical protein MAV_0522 [Myc... 822 0.0 gi|15827008|ref|NP_301271.1| hypothetical protein ML0203 [Mycoba... 817 0.0 gi|120406338|ref|YP_956167.1| hypothetical protein Mvan_5390 [My... 813 0.0 gi|315446268|ref|YP_004079147.1| hypothetical protein Mspyr1_477... 794 0.0 gi|145221992|ref|YP_001132670.1| hypothetical protein Mflv_1400 ... 789 0.0 gi|108801753|ref|YP_641950.1| hypothetical protein Mmcs_4790 [My... 787 0.0 gi|126437740|ref|YP_001073431.1| hypothetical protein Mjls_5176 ... 779 0.0 gi|119870904|ref|YP_940856.1| hypothetical protein Mkms_4876 [My... 778 0.0 gi|333992561|ref|YP_004525175.1| transmembrane protein [Mycobact... 761 0.0 gi|118472669|ref|YP_890364.1| hypothetical protein MSMEG_6143 [M... 756 0.0 gi|289748149|ref|ZP_06507527.1| transmembrane protein [Mycobacte... 671 0.0 gi|169627606|ref|YP_001701255.1| hypothetical protein MAB_0502c ... 641 0.0 gi|325675031|ref|ZP_08154718.1| hypothetical protein HMPREF0724_... 437 3e-120 gi|226303658|ref|YP_002763616.1| hypothetical protein RER_01690 ... 431 1e-118 gi|54024399|ref|YP_118641.1| hypothetical protein nfa24300 [Noca... 430 3e-118 gi|226363310|ref|YP_002781092.1| hypothetical protein ROP_39000 ... 429 1e-117 gi|229492856|ref|ZP_04386654.1| putative membrane protein [Rhodo... 426 7e-117 gi|111021004|ref|YP_703976.1| hypothetical protein RHA1_ro04021 ... 422 6e-116 gi|312138067|ref|YP_004005403.1| integral membrane protein [Rhod... 418 1e-114 gi|296395143|ref|YP_003660027.1| hypothetical protein Srot_2763 ... 372 1e-100 gi|343927251|ref|ZP_08766729.1| hypothetical protein GOALK_087_0... 372 1e-100 gi|333919156|ref|YP_004492737.1| hypothetical protein AS9A_1485 ... 357 4e-96 gi|326383700|ref|ZP_08205385.1| hypothetical protein SCNU_12212 ... 356 6e-96 gi|262201308|ref|YP_003272516.1| hypothetical protein Gbro_1336 ... 338 1e-90 gi|296141010|ref|YP_003648253.1| hypothetical protein Tpau_3330 ... 294 3e-77 gi|213964475|ref|ZP_03392675.1| putative membrane protein [Coryn... 230 4e-58 gi|302870420|ref|YP_003839057.1| hypothetical protein Micau_5978... 179 9e-43 gi|315503303|ref|YP_004082190.1| hypothetical protein ML5_2517 [... 179 1e-42 gi|319951214|ref|ZP_08025052.1| integral membrane protein [Dietz... 177 6e-42 gi|305679638|ref|ZP_07402448.1| putative membrane protein [Coryn... 171 3e-40 gi|225020371|ref|ZP_03709563.1| hypothetical protein CORMATOL_00... 171 3e-40 gi|317509105|ref|ZP_07966734.1| hypothetical protein HMPREF9336_... 162 2e-37 gi|317509107|ref|ZP_07966735.1| hypothetical protein HMPREF9336_... 160 4e-37 >gi|15610771|ref|NP_218152.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|15843247|ref|NP_338284.1| hypothetical protein MT3737 [Mycobacterium tuberculosis CDC1551] gi|31794805|ref|NP_857298.1| transmembrane protein [Mycobacterium bovis AF2122/97] 36 more sequence titles Length=591 Score = 1151 bits (2978), Expect = 0.0, Method: Compositional matrix adjust. Identities = 591/591 (100%), Positives = 591/591 (100%), Gaps = 0/591 (0%) Query 1 MPAPRMPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHD 60 MPAPRMPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHD Sbjct 1 MPAPRMPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHD 60 Query 61 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTF 120 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTF Sbjct 61 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTF 120 Query 121 ALFTPLAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFF 180 ALFTPLAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFF Sbjct 121 ALFTPLAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFF 180 Query 181 EKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRR 240 EKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRR Sbjct 181 EKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRR 240 Query 241 WSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLA 300 WSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLA Sbjct 241 WSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLA 300 Query 301 LSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAV 360 LSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAV Sbjct 301 LSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAV 360 Query 361 ALQAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQAS 420 ALQAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQAS Sbjct 361 ALQAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQAS 420 Query 421 LAAAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLV 480 LAAAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLV Sbjct 421 LAAAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLV 480 Query 481 DAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALS 540 DAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALS Sbjct 481 DAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALS 540 Query 541 DGPERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 DGPERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA Sbjct 541 DGPERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 >gi|297636307|ref|ZP_06954087.1| hypothetical protein MtubK4_19375 [Mycobacterium tuberculosis KZN 4207] gi|313660633|ref|ZP_07817513.1| hypothetical protein MtubKV_19515 [Mycobacterium tuberculosis KZN V2475] Length=604 Score = 1150 bits (2974), Expect = 0.0, Method: Compositional matrix adjust. Identities = 591/591 (100%), Positives = 591/591 (100%), Gaps = 0/591 (0%) Query 1 MPAPRMPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHD 60 MPAPRMPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHD Sbjct 14 MPAPRMPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHD 73 Query 61 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTF 120 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTF Sbjct 74 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTF 133 Query 121 ALFTPLAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFF 180 ALFTPLAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFF Sbjct 134 ALFTPLAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFF 193 Query 181 EKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRR 240 EKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRR Sbjct 194 EKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRR 253 Query 241 WSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLA 300 WSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLA Sbjct 254 WSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLA 313 Query 301 LSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAV 360 LSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAV Sbjct 314 LSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAV 373 Query 361 ALQAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQAS 420 ALQAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQAS Sbjct 374 ALQAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQAS 433 Query 421 LAAAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLV 480 LAAAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLV Sbjct 434 LAAAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLV 493 Query 481 DAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALS 540 DAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALS Sbjct 494 DAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALS 553 Query 541 DGPERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 DGPERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA Sbjct 554 DGPERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 604 >gi|167968556|ref|ZP_02550833.1| conserved transmembrane protein [Mycobacterium tuberculosis H37Ra] Length=610 Score = 1149 bits (2973), Expect = 0.0, Method: Compositional matrix adjust. Identities = 591/591 (100%), Positives = 591/591 (100%), Gaps = 0/591 (0%) Query 1 MPAPRMPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHD 60 MPAPRMPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHD Sbjct 20 MPAPRMPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHD 79 Query 61 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTF 120 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTF Sbjct 80 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTF 139 Query 121 ALFTPLAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFF 180 ALFTPLAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFF Sbjct 140 ALFTPLAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFF 199 Query 181 EKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRR 240 EKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRR Sbjct 200 EKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRR 259 Query 241 WSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLA 300 WSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLA Sbjct 260 WSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLA 319 Query 301 LSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAV 360 LSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAV Sbjct 320 LSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAV 379 Query 361 ALQAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQAS 420 ALQAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQAS Sbjct 380 ALQAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQAS 439 Query 421 LAAAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLV 480 LAAAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLV Sbjct 440 LAAAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLV 499 Query 481 DAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALS 540 DAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALS Sbjct 500 DAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALS 559 Query 541 DGPERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 DGPERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA Sbjct 560 DGPERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 610 >gi|289572282|ref|ZP_06452509.1| transmembrane protein [Mycobacterium tuberculosis K85] gi|339633627|ref|YP_004725269.1| hypothetical protein MAF_36420 [Mycobacterium africanum GM041182] gi|289536713|gb|EFD41291.1| transmembrane protein [Mycobacterium tuberculosis K85] gi|339332983|emb|CCC28711.1| putative conserved transmembrane protein [Mycobacterium africanum GM041182] Length=591 Score = 1147 bits (2967), Expect = 0.0, Method: Compositional matrix adjust. Identities = 590/591 (99%), Positives = 590/591 (99%), Gaps = 0/591 (0%) Query 1 MPAPRMPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHD 60 MPAPRMPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHD Sbjct 1 MPAPRMPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHD 60 Query 61 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTF 120 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTF Sbjct 61 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTF 120 Query 121 ALFTPLAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFF 180 ALFTPLAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFF Sbjct 121 ALFTPLAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFF 180 Query 181 EKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRR 240 EKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRR Sbjct 181 EKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRR 240 Query 241 WSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLA 300 WSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLA Sbjct 241 WSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLA 300 Query 301 LSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAV 360 LSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAV Sbjct 301 LSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAV 360 Query 361 ALQAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQAS 420 ALQAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQAS Sbjct 361 ALQAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQAS 420 Query 421 LAAAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLV 480 LAAAASGA LLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLV Sbjct 421 LAAAASGALLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLV 480 Query 481 DAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALS 540 DAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALS Sbjct 481 DAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALS 540 Query 541 DGPERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 DGPERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA Sbjct 541 DGPERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 >gi|254233133|ref|ZP_04926459.1| hypothetical protein TBCG_03558 [Mycobacterium tuberculosis C] gi|254366187|ref|ZP_04982231.1| conserved transmembrane protein [Mycobacterium tuberculosis str. Haarlem] gi|308232518|ref|ZP_07416325.2| conserved membrane protein [Mycobacterium tuberculosis SUMu001] 24 more sequence titles Length=586 Score = 1139 bits (2946), Expect = 0.0, Method: Compositional matrix adjust. Identities = 586/586 (100%), Positives = 586/586 (100%), Gaps = 0/586 (0%) Query 6 MPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMP 65 MPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMP Sbjct 1 MPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMP 60 Query 66 GAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTP 125 GAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTP Sbjct 61 GAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTP 120 Query 126 LAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAV 185 LAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAV Sbjct 121 LAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAV 180 Query 186 IPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDL 245 IPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDL Sbjct 181 IPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDL 240 Query 246 SMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVR 305 SMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVR Sbjct 241 SMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVR 300 Query 306 KRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAP 365 KRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAP Sbjct 301 KRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAP 360 Query 366 NRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAA 425 NRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAA Sbjct 361 NRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAA 420 Query 426 SGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVT 485 SGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVT Sbjct 421 SGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVT 480 Query 486 WVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPER 545 WVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPER Sbjct 481 WVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPER 540 Query 546 KVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 KVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA Sbjct 541 KVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 586 >gi|308379563|ref|ZP_07486767.2| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|308356560|gb|EFP45411.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010] gi|339296448|gb|AEJ48559.1| conserved membrane protein [Mycobacterium tuberculosis CCDC5079] gi|339300049|gb|AEJ52159.1| conserved membrane protein [Mycobacterium tuberculosis CCDC5180] Length=577 Score = 1124 bits (2908), Expect = 0.0, Method: Compositional matrix adjust. Identities = 576/577 (99%), Positives = 577/577 (100%), Gaps = 0/577 (0%) Query 15 LLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAI 74 +LITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAI Sbjct 1 MLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAI 60 Query 75 IRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWW 134 IRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWW Sbjct 61 IRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWW 120 Query 135 AAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFAVA 194 AAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFAVA Sbjct 121 AAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFAVA 180 Query 195 ALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWDLLCR 254 ALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWDLLCR Sbjct 181 ALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWDLLCR 240 Query 255 SVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPVWL 314 SVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPVWL Sbjct 241 SVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPVWL 300 Query 315 TAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNRAGTRWLD 374 TAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNRAGTRWLD Sbjct 301 TAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNRAGTRWLD 360 Query 375 ASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASGAPLLDQE 434 ASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASGAPLLDQE Sbjct 361 ASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASGAPLLDQE 420 Query 435 VDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIAGP 494 VDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIAGP Sbjct 421 VDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIAGP 480 Query 495 VPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVHPGLN 554 VPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVHPGLN Sbjct 481 VPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVHPGLN 540 Query 555 RVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 RVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA Sbjct 541 RVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 577 >gi|340628600|ref|YP_004747052.1| hypothetical protein MCAN_36471 [Mycobacterium canettii CIPT 140010059] gi|340006790|emb|CCC45978.1| putative conserved transmembrane protein [Mycobacterium canettii CIPT 140010059] Length=591 Score = 1033 bits (2671), Expect = 0.0, Method: Compositional matrix adjust. Identities = 579/591 (98%), Positives = 583/591 (99%), Gaps = 0/591 (0%) Query 1 MPAPRMPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHD 60 MPAPRMPRVALVAVLLITVQLVVR VLAFGGYFYWDDLIL+GRAGTGGLLSPSYLFDDHD Sbjct 1 MPAPRMPRVALVAVLLITVQLVVRAVLAFGGYFYWDDLILLGRAGTGGLLSPSYLFDDHD 60 Query 61 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTF 120 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLL SLALLRALYVISSWRPVLLIPLTF Sbjct 61 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLLASLALLRALYVISSWRPVLLIPLTF 120 Query 121 ALFTPLAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFF 180 ALFTPLAVPGF WWAAALNSLPMLAALAWVCADAILLVRTGNHRYA TGVLVYLGGLLFF Sbjct 121 ALFTPLAVPGFTWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAATGVLVYLGGLLFF 180 Query 181 EKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRR 240 EKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRR Sbjct 181 EKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRR 240 Query 241 WSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLA 300 WSSDLSMTWDLL RSVTHGIVPALAGGPWDWARWAPASPWATPPA VMVLGWLVLIAVLA Sbjct 241 WSSDLSMTWDLLRRSVTHGIVPALAGGPWDWARWAPASPWATPPAGVMVLGWLVLIAVLA 300 Query 301 LSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAV 360 LSLVRK+RIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAV Sbjct 301 LSLVRKQRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAV 360 Query 361 ALQAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQAS 420 ALQAPNRAGTRWLDASPARAVATV +AVLFLTSSLYSTATFLASWRDNPTEGYLKNAQAS Sbjct 361 ALQAPNRAGTRWLDASPARAVATVVAAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQAS 420 Query 421 LAAAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLV 480 LAAAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLV Sbjct 421 LAAAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLV 480 Query 481 DAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALS 540 DAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALS Sbjct 481 DAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALS 540 Query 541 DGPERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 DGPE+KVPVHPGLNRVYARLPGAGDAITVRANTTALSLCI AAPVGFLAPA Sbjct 541 DGPEQKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIAAAPVGFLAPA 591 >gi|118619384|ref|YP_907716.1| hypothetical protein MUL_4211 [Mycobacterium ulcerans Agy99] gi|118571494|gb|ABL06245.1| conserved hypothetical membrane protein [Mycobacterium ulcerans Agy99] Length=594 Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust. Identities = 460/587 (79%), Positives = 507/587 (87%), Gaps = 3/587 (0%) Query 6 MPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMP 65 +P+VA+ A+ LI +QL VR VLAF GYFYWDDLILVGRAGT LLS +YLF+DHDGHVMP Sbjct 8 VPKVAVAAIALIMIQLGVRAVLAFRGYFYWDDLILVGRAGTQDLLSATYLFEDHDGHVMP 67 Query 66 GAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTP 125 GAFLVAG IIR+ PL WTGPAISLVVLQLL SLALLRALYVI WR VLLIPLTFALFTP Sbjct 68 GAFLVAGIIIRLMPLDWTGPAISLVVLQLLASLALLRALYVILGWRRVLLIPLTFALFTP 127 Query 126 LAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAV 185 L VPGFAWWAAALNSLP+LAALAWVC DAILL+RTGN RYAV+ VL Y GLLFFEKAAV Sbjct 128 LGVPGFAWWAAALNSLPLLAALAWVCGDAILLIRTGNQRYAVSAVLAYFAGLLFFEKAAV 187 Query 186 IPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDL 245 +PFV+FAV+AL CHV GD+ L T W+AG+RLWT +LALT GW+ LYLAVVDQ+RWS DL Sbjct 188 VPFVAFAVSALVCHVGGDKRPLRTAWQAGIRLWTAALALTAGWMVLYLAVVDQKRWSGDL 247 Query 246 SMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVR 305 +MTWDLLCRS+THGIV LAGGPW W RWAPASPWATPP VM LGWLVL +L LSL+R Sbjct 248 AMTWDLLCRSITHGIVGGLAGGPWRWDRWAPASPWATPPPTVMALGWLVLAGLLGLSLIR 307 Query 306 KRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAP 365 KRRIG VWLTAAGYAVACQVPI+LMRSS FTALELAQTLRYFPDLVVVLALLA VAL A Sbjct 308 KRRIGAVWLTAAGYAVACQVPIYLMRSSRFTALELAQTLRYFPDLVVVLALLATVALTAA 367 Query 366 NRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAA 425 NR + WL+AS RA A+ +LFL SSLYSTATFL SWRDNPT+ YL+NA+ASLA A Sbjct 368 NRP-SDWLNASRVRASTITAAVMLFLASSLYSTATFLTSWRDNPTKSYLQNAEASLAGAQ 426 Query 426 --SGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAK 483 S APLLDQEVDPLVLQRVAWPENLASHMFALL RP+FAT TT+LRMFTS+G LVDA+ Sbjct 427 INSNAPLLDQEVDPLVLQRVAWPENLASHMFALLPNRPDFATATTKLRMFTSSGNLVDAR 486 Query 484 VTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGP 543 VTW+RTI+ GP+PQCGYF QPD+P RL+LDGPLLP DWTVELNYL NSDGS+ LAL +GP Sbjct 487 VTWIRTIVPGPMPQCGYFAQPDQPARLVLDGPLLPADWTVELNYLVNSDGSITLALPEGP 546 Query 544 ERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAP 590 ERKVPVHPGLNRVYARLPGAGD ITVRANTTAL++C+ + PVGFLAP Sbjct 547 ERKVPVHPGLNRVYARLPGAGDVITVRANTTALAVCVASGPVGFLAP 593 >gi|240172954|ref|ZP_04751612.1| hypothetical protein MkanA1_26814 [Mycobacterium kansasii ATCC 12478] Length=584 Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust. Identities = 477/574 (84%), Positives = 506/574 (89%), Gaps = 3/574 (0%) Query 19 VQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAIIRVA 78 VQL VR VLAFGGYFYWDDLILVG+AGT GLLSPSYLFDDHDGHVMPGAFLV GAIIR A Sbjct 11 VQLGVRAVLAFGGYFYWDDLILVGKAGTQGLLSPSYLFDDHDGHVMPGAFLVGGAIIRAA 70 Query 79 PLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWWAAAL 138 PLVWTGPAISLVVLQLL SLALLRAL VI WRPVLLIPLTFALFTPL VPGFAWWAAAL Sbjct 71 PLVWTGPAISLVVLQLLASLALLRALQVILGWRPVLLIPLTFALFTPLGVPGFAWWAAAL 130 Query 139 NSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFAVAALQC 198 NSLPMLAALAWVCADA+LL+RTGN RYAVTGVLVYL GLLFFEKAAVIPFV+FAVAAL C Sbjct 131 NSLPMLAALAWVCADAVLLIRTGNPRYAVTGVLVYLVGLLFFEKAAVIPFVAFAVAALWC 190 Query 199 HVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWDLLCRSVTH 258 HV GD +L TVWRAG+RLWT SLALT WVALYL VV+Q+RWSSDLSMTW+LLCRS+TH Sbjct 191 HVGGDPRSLRTVWRAGLRLWTASLALTAAWVALYLVVVNQKRWSSDLSMTWNLLCRSITH 250 Query 259 GIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPVWLTAAG 318 GIVP LAGGPW W RWAPASPW TPP VM LGWLVL+ VL LSL+RKRRIGPVWLTAAG Sbjct 251 GIVPGLAGGPWHWDRWAPASPWGTPPPAVMTLGWLVLLGVLGLSLIRKRRIGPVWLTAAG 310 Query 319 YAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNRAGTRWLDASPA 378 Y VACQVP++LMRSS FTALELAQTLRY PDLVVVLALL AVA APNR +RWLDAS Sbjct 311 YTVACQVPVYLMRSSRFTALELAQTLRYLPDLVVVLALLGAVACTAPNRP-SRWLDASLM 369 Query 379 RAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAA--SGAPLLDQEVD 436 RA T LFL S LYST+TFL SWRDNPT+ YL+NA+ASLAAA S APLLDQEVD Sbjct 370 RAAVTTGLTALFLASCLYSTSTFLTSWRDNPTKAYLQNAKASLAAAHADSNAPLLDQEVD 429 Query 437 PLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIAGPVP 496 PLVLQRVAWPENLASHMFALLR RPEF T TT+LRMF S+G LVDA+VTWVRTI+ GP P Sbjct 430 PLVLQRVAWPENLASHMFALLRDRPEFETATTRLRMFNSSGSLVDARVTWVRTIVPGPQP 489 Query 497 QCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVHPGLNRV 556 +CGYF QPD+P RL+LDGPLLP DWTVELNYLANSDGSM L+LSDGPERKVPVHPGLNRV Sbjct 490 RCGYFTQPDQPTRLVLDGPLLPADWTVELNYLANSDGSMTLSLSDGPERKVPVHPGLNRV 549 Query 557 YARLPGAGDAITVRANTTALSLCIGAAPVGFLAP 590 YARLPGAGDAITVRANTTALSLCI + PVG+LAP Sbjct 550 YARLPGAGDAITVRANTTALSLCIASGPVGYLAP 583 >gi|183985102|ref|YP_001853393.1| hypothetical protein MMAR_5134 [Mycobacterium marinum M] gi|183178428|gb|ACC43538.1| conserved hypothetical membrane protein [Mycobacterium marinum M] Length=594 Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/587 (80%), Positives = 510/587 (87%), Gaps = 3/587 (0%) Query 6 MPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMP 65 +P+VA+ A+ LI +QL VR VLAF GYFYWDDLILVGRAGT LLS +YLFDDHDGHVMP Sbjct 8 VPKVAVAAIALIMIQLGVRAVLAFRGYFYWDDLILVGRAGTQDLLSATYLFDDHDGHVMP 67 Query 66 GAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTP 125 GAFLVAG IIR+ PL WTGPAISLVVLQLL SLALLRALYVI WR VLLIPLTFALFTP Sbjct 68 GAFLVAGIIIRLMPLDWTGPAISLVVLQLLASLALLRALYVILGWRRVLLIPLTFALFTP 127 Query 126 LAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAV 185 L VPGFAWWAAALNSLP+LAALAWVC DAILL+RTGN RYAV+ VL Y GLLFFEKAAV Sbjct 128 LGVPGFAWWAAALNSLPLLAALAWVCGDAILLIRTGNQRYAVSAVLAYFAGLLFFEKAAV 187 Query 186 IPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDL 245 +PFV+FAV+AL CHV GD+ L T W+AG+RLWT +LALT GW+ LYLAVVDQ+RWS DL Sbjct 188 VPFVAFAVSALVCHVGGDKRPLRTAWQAGIRLWTAALALTAGWMVLYLAVVDQKRWSGDL 247 Query 246 SMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVR 305 +MTWDLLCRS+THGIV LAGGPW W RWAPASPWATPP VM LGWLVL +L LSL+R Sbjct 248 AMTWDLLCRSITHGIVGGLAGGPWRWDRWAPASPWATPPPTVMALGWLVLAGLLGLSLIR 307 Query 306 KRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAP 365 KRRIG VWLTAAGYAVACQVPI+LMRSS FTALELAQTLRYFPDLVVVLALLAAVAL A Sbjct 308 KRRIGAVWLTAAGYAVACQVPIYLMRSSRFTALELAQTLRYFPDLVVVLALLAAVALTAA 367 Query 366 NRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAA 425 NR + WL+AS RA A+A+LFL SSLYSTATFL SWRDNPT+ YL+NA+ASLA A Sbjct 368 NRP-SDWLNASRVRASTITAAAILFLASSLYSTATFLTSWRDNPTKSYLQNAEASLAGAQ 426 Query 426 --SGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAK 483 S APLLDQEVDPLVLQRVAWPENLASHMFALL RP+FAT TT+LRMFTS+G LVDA+ Sbjct 427 INSNAPLLDQEVDPLVLQRVAWPENLASHMFALLPNRPDFATATTKLRMFTSSGNLVDAR 486 Query 484 VTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGP 543 VTW+RTI+ GP+PQCGYF QPD+P RL+LDGPLLP DWTVELNYLANSDGS+ LAL +GP Sbjct 487 VTWIRTIVPGPMPQCGYFAQPDQPARLVLDGPLLPADWTVELNYLANSDGSITLALPEGP 546 Query 544 ERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAP 590 ERKVPVHPGLNRVYARLPGAGD ITVRANTTAL++C+ + PVGFLAP Sbjct 547 ERKVPVHPGLNRVYARLPGAGDVITVRANTTALAVCVASGPVGFLAP 593 >gi|296166698|ref|ZP_06849123.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897963|gb|EFG77544.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=585 Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/582 (80%), Positives = 506/582 (87%), Gaps = 3/582 (0%) Query 13 AVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAG 72 AV LI QL +R LAFGGYFYWDDLIL+G+AGT LLSPSYLFDDHDGHVMPGAFLV G Sbjct 4 AVALIAAQLGIRAALAFGGYFYWDDLILIGKAGTHNLLSPSYLFDDHDGHVMPGAFLVGG 63 Query 73 AIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFA 132 AI+R+APL WTGPAISL+VLQLL SLALLRAL V+ WRPVLLIPLTFALFTPLAVPGFA Sbjct 64 AIVRLAPLNWTGPAISLLVLQLLASLALLRALRVMLGWRPVLLIPLTFALFTPLAVPGFA 123 Query 133 WWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFA 192 WWAAALNSLPMLAALAWVCADAILLVRTGN RYAVTG LVY GLLFFEKAAVIPFV+FA Sbjct 124 WWAAALNSLPMLAALAWVCADAILLVRTGNPRYAVTGTLVYFVGLLFFEKAAVIPFVAFA 183 Query 193 VAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWDLL 252 VAAL HVRGDR+A ATVWRAG+RLW P+LA+T GWVALYLAVV+QRRWSSDL+MT DLL Sbjct 184 VAALLRHVRGDRAATATVWRAGLRLWVPTLAVTAGWVALYLAVVNQRRWSSDLAMTADLL 243 Query 253 CRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPV 312 RS+THGIVP LAGGPW W RWAPASPWATPP VM LGWLVL L +SL+RK+RIGPV Sbjct 244 ARSITHGIVPGLAGGPWHWDRWAPASPWATPPPAVMALGWLVLAGALGVSLLRKQRIGPV 303 Query 313 WLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNR-AGTR 371 WLTA GYAVACQVPI+LMR+S TALELAQTLRYFPDLV VLALLAAVA APNR G R Sbjct 304 WLTAVGYAVACQVPIYLMRASKQTALELAQTLRYFPDLVFVLALLAAVAFCAPNRPVGPR 363 Query 372 WLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAA--AASGAP 429 WLDASPAR A + A LF+ SS+YST TFL SWRDNP + YL+NA+A LA AAS AP Sbjct 364 WLDASPARTAAALGLAALFVASSVYSTKTFLTSWRDNPAQPYLQNARADLATAHAASTAP 423 Query 430 LLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRT 489 LLDQEVDPLVLQRVA PENLASHMFALLR RPEFA+ TTQLRM S+GRLV A+VTWVRT Sbjct 424 LLDQEVDPLVLQRVAAPENLASHMFALLRDRPEFASATTQLRMLDSSGRLVRARVTWVRT 483 Query 490 IIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPV 549 I+ GPVP+CGYF QPD+P RL+LDGPLLP DWTVELNYLANS+G+M L+++ GP+ +VPV Sbjct 484 IVPGPVPRCGYFAQPDQPARLVLDGPLLPADWTVELNYLANSEGTMTLSMTQGPDVRVPV 543 Query 550 HPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 HPGLNRV+ARLPGAGDAITVRA TTAL+LC+ + PVGFLAPA Sbjct 544 HPGLNRVFARLPGAGDAITVRAKTTALALCLASGPVGFLAPA 585 >gi|289571871|ref|ZP_06452098.1| conserved membrane protein [Mycobacterium tuberculosis T17] gi|289545625|gb|EFD49273.1| conserved membrane protein [Mycobacterium tuberculosis T17] Length=470 Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust. Identities = 447/449 (99%), Positives = 447/449 (99%), Gaps = 0/449 (0%) Query 1 MPAPRMPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHD 60 MPAPRMPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHD Sbjct 1 MPAPRMPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHD 60 Query 61 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTF 120 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTF Sbjct 61 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTF 120 Query 121 ALFTPLAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFF 180 ALFTPLAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFF Sbjct 121 ALFTPLAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFF 180 Query 181 EKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRR 240 EKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRR Sbjct 181 EKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRR 240 Query 241 WSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLA 300 WSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLA Sbjct 241 WSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLA 300 Query 301 LSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAV 360 LSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAV Sbjct 301 LSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAV 360 Query 361 ALQAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQAS 420 ALQAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQAS Sbjct 361 ALQAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQAS 420 Query 421 LAAAASGAPLLDQEVDPLVLQRVAWPENL 449 LAAAASGAPLLDQEVDPLVLQRVAWP L Sbjct 421 LAAAASGAPLLDQEVDPLVLQRVAWPGEL 449 >gi|254819875|ref|ZP_05224876.1| hypothetical protein MintA_08119 [Mycobacterium intracellulare ATCC 13950] Length=579 Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust. Identities = 463/579 (80%), Positives = 494/579 (86%), Gaps = 6/579 (1%) Query 19 VQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAIIRVA 78 +QL VR LAFGGYFYWDDLIL+G+AGT LL+PSYLF DHDGHVMP AFL+AG IIR+A Sbjct 1 MQLAVRAALAFGGYFYWDDLILIGKAGTHNLLAPSYLFHDHDGHVMPAAFLLAGTIIRLA 60 Query 79 PLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWWAAAL 138 PL WT PA+SLV LQLL SLALLRAL+ I WRPVLLIPLTFALFTPL VPGFAWWAAAL Sbjct 61 PLDWTWPAVSLVALQLLASLALLRALHAILGWRPVLLIPLTFALFTPLGVPGFAWWAAAL 120 Query 139 NSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFAVAALQC 198 NSLPMLAALAWVCADA+LLVRTGN RYAVTGVLVY GGLLFFEKAAVIPFV+FAVAAL Sbjct 121 NSLPMLAALAWVCADAVLLVRTGNRRYAVTGVLVYFGGLLFFEKAAVIPFVAFAVAALLR 180 Query 199 HVRGD---RSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWDLLCRS 255 HV GD SALA VWRAG RLW +LALT WV LYLAVV+QRRWSSDLSMT LL RS Sbjct 181 HVTGDGGLGSALAAVWRAGARLWVAALALTAAWVVLYLAVVNQRRWSSDLSMTRRLLARS 240 Query 256 VTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPVWLT 315 +THGIVP LAGGPW W RWAPASPWATPP VM LGWLVL LA+SL RKRRIGPVW T Sbjct 241 ITHGIVPGLAGGPWHWDRWAPASPWATPPPSVMALGWLVLGGALAVSLARKRRIGPVWAT 300 Query 316 AAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNR-AGTRWLD 374 AAGYAVACQVPI+LMRSS TALELAQTLRYFPDLVVVLALLAAVAL APNR AG WLD Sbjct 301 AAGYAVACQVPIYLMRSSKQTALELAQTLRYFPDLVVVLALLAAVALCAPNRPAGRGWLD 360 Query 375 ASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAA--AASGAPLLD 432 ASP RA T AVLF+ SSL+STATFL SWRDNP + YL+NAQASLAA AAS APLLD Sbjct 361 ASPKRAAVTAGLAVLFVASSLHSTATFLTSWRDNPAQPYLQNAQASLAAVHAASDAPLLD 420 Query 433 QEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIA 492 QEVDPLVLQRVA PENLASHMFALLR RPEFA TTQLRM S+G L+ A+VTWVRTI Sbjct 421 QEVDPLVLQRVAAPENLASHMFALLRDRPEFAPATTQLRMLDSSGHLIKARVTWVRTIAP 480 Query 493 GPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVHPG 552 GP+P+CGYF QPD+P RL LDGPLLP DWTVELNYLANSDGSM L+++ GPE KVPVHPG Sbjct 481 GPMPRCGYFAQPDKPARLALDGPLLPADWTVELNYLANSDGSMTLSMTQGPEVKVPVHPG 540 Query 553 LNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 LNRV+ARLPGAGDAITVRANT AL+LCI + PVGFLAPA Sbjct 541 LNRVFARLPGAGDAITVRANTAALALCIASGPVGFLAPA 579 >gi|41406527|ref|NP_959363.1| hypothetical protein MAP0429c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394876|gb|AAS02746.1| hypothetical protein MAP_0429c [Mycobacterium avium subsp. paratuberculosis K-10] Length=584 Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/584 (80%), Positives = 503/584 (87%), Gaps = 3/584 (0%) Query 11 LVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLV 70 + A L+ VQL VR VLAFGGYFYWDDLIL+G+AGT LL+PSYLFDDHDGH+MPGAFL+ Sbjct 1 MAAAALVVVQLAVRAVLAFGGYFYWDDLILIGKAGTHNLLAPSYLFDDHDGHLMPGAFLL 60 Query 71 AGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPG 130 AG IIR APL WT PA+SL+VLQLL SLALLRAL+VI WRPVLLIP TFALFTPLAVPG Sbjct 61 AGTIIRAAPLDWTWPAVSLLVLQLLASLALLRALHVILGWRPVLLIPFTFALFTPLAVPG 120 Query 131 FAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVS 190 FAWWAAALNSLP+LAALAWVC DAILLVRTGN RYA+TGVLVYLGGLLFFEKAAVIPFV+ Sbjct 121 FAWWAAALNSLPLLAALAWVCGDAILLVRTGNRRYALTGVLVYLGGLLFFEKAAVIPFVA 180 Query 191 FAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWD 250 FAVAAL HV GDR+A TVWRAG+RLW PSLALT WV LYLAVV+QRRWSSD+ MT Sbjct 181 FAVAALLRHVAGDRAAARTVWRAGLRLWVPSLALTAAWVGLYLAVVNQRRWSSDVVMTGR 240 Query 251 LLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIG 310 LL RS+THGIVP LAGGPW W RWAPASPWATPP +VMVLGWLVL VLA+SL+RKRRIG Sbjct 241 LLVRSITHGIVPGLAGGPWHWDRWAPASPWATPPPLVMVLGWLVLAGVLAVSLLRKRRIG 300 Query 311 PVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNR-AG 369 PVWLTAAGYAVACQVPI+LMRSS TALELAQTLRY PDLVVVLALLAAVAL APNR AG Sbjct 301 PVWLTAAGYAVACQVPIYLMRSSKQTALELAQTLRYLPDLVVVLALLAAVALSAPNRPAG 360 Query 370 TRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKN--AQASLAAAASG 427 R LDASP R V A LFL SSLYSTATFL SWRDNP + YL+N A + A AAS Sbjct 361 PRRLDASPKRTVVACGLAALFLASSLYSTATFLTSWRDNPAQPYLRNARAALAAAHAASD 420 Query 428 APLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWV 487 APLLDQEVDPLVLQRVA PENLASH+FALLR RPEFA+ TTQLRM S+GRL+ A+VTWV Sbjct 421 APLLDQEVDPLVLQRVAAPENLASHLFALLRDRPEFASATTQLRMLDSSGRLIRARVTWV 480 Query 488 RTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKV 547 RTI GP+PQCGYF QPDRP RL+LDGPLLP DWTVELNYLANSDGSM L+++ GP KV Sbjct 481 RTITPGPMPQCGYFAQPDRPARLVLDGPLLPADWTVELNYLANSDGSMTLSMTQGPPVKV 540 Query 548 PVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 PVHPGLNRV+ RLPGAGDAITVRANTTAL+LC+ + PVGFLAPA Sbjct 541 PVHPGLNRVFVRLPGAGDAITVRANTTALALCLASGPVGFLAPA 584 >gi|336460947|gb|EGO39830.1| hypothetical protein MAPs_36130 [Mycobacterium avium subsp. paratuberculosis S397] Length=577 Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/576 (81%), Positives = 499/576 (87%), Gaps = 3/576 (0%) Query 19 VQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAIIRVA 78 VQL VR VLAFGGYFYWDDLIL+G+AGT LL+PSYLFDDHDGH+MPGAFL+AG IIR A Sbjct 2 VQLAVRAVLAFGGYFYWDDLILIGKAGTHNLLAPSYLFDDHDGHLMPGAFLLAGTIIRAA 61 Query 79 PLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWWAAAL 138 PL WT PA+SL+VLQLL SLALLRAL+VI WRPVLLIP TFALFTPLAVPGFAWWAAAL Sbjct 62 PLDWTWPAVSLLVLQLLASLALLRALHVILGWRPVLLIPFTFALFTPLAVPGFAWWAAAL 121 Query 139 NSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFAVAALQC 198 NSLP+LAALAWVC DAILLVRTGN RYA+TGVLVYLGGLLFFEKAAVIPFV+FAVAAL Sbjct 122 NSLPLLAALAWVCGDAILLVRTGNRRYALTGVLVYLGGLLFFEKAAVIPFVAFAVAALLR 181 Query 199 HVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWDLLCRSVTH 258 HV GDR+A TVWRAG+RLW PSLALT WV LYLAVV+QRRWSSD+ MT LL RS+TH Sbjct 182 HVAGDRAAARTVWRAGLRLWVPSLALTAAWVGLYLAVVNQRRWSSDVVMTGRLLVRSITH 241 Query 259 GIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPVWLTAAG 318 GIVP LAGGPW W RWAPASPWATPP +VMVLGWLVL VLA+SL+RKRRIGPVWLTAAG Sbjct 242 GIVPGLAGGPWHWDRWAPASPWATPPPLVMVLGWLVLAGVLAVSLLRKRRIGPVWLTAAG 301 Query 319 YAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNR-AGTRWLDASP 377 YAVACQVPI+LMRSS TALELAQTLRY PDLVVVLALLAAVAL APNR AG R LDASP Sbjct 302 YAVACQVPIYLMRSSKQTALELAQTLRYLPDLVVVLALLAAVALSAPNRPAGPRRLDASP 361 Query 378 ARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKN--AQASLAAAASGAPLLDQEV 435 R V A LFL SSLYSTATFL SWRDNP + YL+N A + A AAS APLLDQEV Sbjct 362 KRTVVACGLAALFLASSLYSTATFLTSWRDNPAQPYLRNARAALAAAHAASDAPLLDQEV 421 Query 436 DPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIAGPV 495 DPLVLQRVA PENLASH+FALLR RPEFA+ TTQLRM S+GRL+ A+VTWVRTI GP+ Sbjct 422 DPLVLQRVAAPENLASHLFALLRDRPEFASATTQLRMLDSSGRLIRARVTWVRTITPGPM 481 Query 496 PQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVHPGLNR 555 PQCGYF QPDRP RL+LDGPLLP DWTVELNYLANSDGSM L+++ GP KVPVHPGLNR Sbjct 482 PQCGYFAQPDRPARLVLDGPLLPADWTVELNYLANSDGSMTLSMTQGPPVKVPVHPGLNR 541 Query 556 VYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 V+ RLPGAGDAITVRANTTAL+LC+ + PVGFLAPA Sbjct 542 VFVRLPGAGDAITVRANTTALALCLASGPVGFLAPA 577 >gi|342862020|ref|ZP_08718664.1| hypothetical protein MCOL_24135 [Mycobacterium colombiense CECT 3035] gi|342130560|gb|EGT83869.1| hypothetical protein MCOL_24135 [Mycobacterium colombiense CECT 3035] Length=605 Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/579 (80%), Positives = 496/579 (86%), Gaps = 6/579 (1%) Query 19 VQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAIIRVA 78 VQL VR VLAFGGYFYWDDLIL+G+AGT LL+PSYLFDDHDGHVMPGAFLVAG IIR+A Sbjct 27 VQLAVRAVLAFGGYFYWDDLILIGKAGTHNLLAPSYLFDDHDGHVMPGAFLVAGTIIRLA 86 Query 79 PLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWWAAAL 138 PL WT PA+SL+VLQLL SLALLRAL+VI WRPVLLIPLTFALFTPL VPGFAWWAAAL Sbjct 87 PLNWTWPAVSLLVLQLLASLALLRALHVILGWRPVLLIPLTFALFTPLGVPGFAWWAAAL 146 Query 139 NSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFAVAALQC 198 NSLPMLAALAWVCADAILLVRTG RYAVTGVLVY GGLLFFEKAAVIPFV+FAVAAL C Sbjct 147 NSLPMLAALAWVCADAILLVRTGKQRYAVTGVLVYFGGLLFFEKAAVIPFVAFAVAALLC 206 Query 199 HVRGDR---SALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWDLLCRS 255 HV GDR SALATVWRAG+RLW +LALT WVALYLAVV+Q+RWSSDL+MT LL RS Sbjct 207 HVTGDRSLGSALATVWRAGLRLWIAALALTAAWVALYLAVVNQQRWSSDLAMTGQLLMRS 266 Query 256 VTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPVWLT 315 +THGIVP LAGGPW W RWAPASPWATP VM LGWLVL A+LA+SLVRK RIGPVW Sbjct 267 ITHGIVPGLAGGPWHWDRWAPASPWATPAPPVMTLGWLVLAAILAVSLVRKERIGPVWAI 326 Query 316 AAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPN-RAGTRWLD 374 A GYAVACQVPI+LMRSS TALELAQTLRY PDLVVVLALLAAVAL APN RA RWLD Sbjct 327 AVGYAVACQVPIYLMRSSKQTALELAQTLRYLPDLVVVLALLAAVALCAPNRRAAPRWLD 386 Query 375 ASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKN--AQASLAAAASGAPLLD 432 ASP R A LF+ SSLYSTATFL SWRDNP + YL+N A + A AAS APLLD Sbjct 387 ASPKRTAVAAVLAALFVASSLYSTATFLTSWRDNPAQPYLRNARAALAQAHAASDAPLLD 446 Query 433 QEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIA 492 QEVDPLVLQRVA PENLASH+FALLR RPEFA TTQLRMF +GRL+ A+VTWVRTI Sbjct 447 QEVDPLVLQRVAAPENLASHLFALLRDRPEFAPATTQLRMFDRSGRLIKARVTWVRTIAP 506 Query 493 GPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVHPG 552 GP+P+CGYF QPD+P RL+LDGPLLP DWTVELNYLANSDGSM L ++ GPE KVPVHPG Sbjct 507 GPIPRCGYFAQPDKPARLVLDGPLLPADWTVELNYLANSDGSMTLTMTQGPEVKVPVHPG 566 Query 553 LNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 LNRV+ARLPGAGDAITVRANTTAL+LCI + PVGFLAPA Sbjct 567 LNRVFARLPGAGDAITVRANTTALALCIASGPVGFLAPA 605 >gi|254773492|ref|ZP_05215008.1| hypothetical protein MaviaA2_02275 [Mycobacterium avium subsp. avium ATCC 25291] Length=580 Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust. Identities = 460/579 (80%), Positives = 498/579 (87%), Gaps = 6/579 (1%) Query 19 VQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAIIRVA 78 VQL VR VLAFGGYFYWDDLIL+G+AGT LL+PSYLFDDHDGH+MPGAFL+AG IIR A Sbjct 2 VQLAVRAVLAFGGYFYWDDLILIGKAGTHNLLAPSYLFDDHDGHLMPGAFLLAGTIIRAA 61 Query 79 PLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWWAAAL 138 PL WT PA+SL+VLQLL SLALLRAL+VI WRPVLLIP TFALFTPLAVPGFAWWAAAL Sbjct 62 PLDWTWPAVSLLVLQLLASLALLRALHVILGWRPVLLIPFTFALFTPLAVPGFAWWAAAL 121 Query 139 NSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFAVAALQC 198 NSLP+LAALAWVC DAILLVRTGN RYA+TGVLVYLGGLLFFEK+AVIPFV+FAVAAL Sbjct 122 NSLPLLAALAWVCGDAILLVRTGNRRYALTGVLVYLGGLLFFEKSAVIPFVAFAVAALLR 181 Query 199 HVRGDR---SALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWDLLCRS 255 HV GD SAL VWRAG+RLW PSLALT WV LYLAVV+QRRWSSD+ MT LL RS Sbjct 182 HVAGDAGPGSALRAVWRAGLRLWVPSLALTAAWVGLYLAVVNQRRWSSDVVMTGRLLVRS 241 Query 256 VTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPVWLT 315 +THGIVP LAGGPW W RWAPASPWATPP +VM LGWL L VLA+SL+RKRRIGPVWLT Sbjct 242 ITHGIVPGLAGGPWHWDRWAPASPWATPPPLVMALGWLALAGVLAVSLLRKRRIGPVWLT 301 Query 316 AAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNR-AGTRWLD 374 AAGYAVACQVPI+LMRSS TALELAQTLRY PDLVVVLALLAAVAL APNR AG RWLD Sbjct 302 AAGYAVACQVPIYLMRSSKQTALELAQTLRYLPDLVVVLALLAAVALSAPNRPAGPRWLD 361 Query 375 ASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKN--AQASLAAAASGAPLLD 432 ASP R + A LFL SSLYSTATFL SWRDNP + YL+N A + A AAS APLLD Sbjct 362 ASPKRTIVACGLAALFLASSLYSTATFLTSWRDNPAQPYLRNARAALAAAHAASDAPLLD 421 Query 433 QEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIA 492 QEVDPLVLQRVA PENLASH+FALLR RPEFA+ TTQLRM S+GRL+ A+VTWVRTI Sbjct 422 QEVDPLVLQRVAAPENLASHLFALLRDRPEFASATTQLRMLDSSGRLIRARVTWVRTITP 481 Query 493 GPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVHPG 552 GP+PQCGYF QPDRP RL+LDGPLLP DWTVELNYLANSDGSM L+++ GP KVPVHPG Sbjct 482 GPMPQCGYFAQPDRPARLVLDGPLLPADWTVELNYLANSDGSMTLSMTQGPPVKVPVHPG 541 Query 553 LNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 LNRV+ARLPGAGDAITVRANTTAL+LC+ + PVGFLAPA Sbjct 542 LNRVFARLPGAGDAITVRANTTALALCLASGPVGFLAPA 580 >gi|118467239|ref|YP_879802.1| hypothetical protein MAV_0522 [Mycobacterium avium 104] gi|118168526|gb|ABK69423.1| conserved hypothetical protein [Mycobacterium avium 104] Length=580 Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust. Identities = 460/579 (80%), Positives = 498/579 (87%), Gaps = 6/579 (1%) Query 19 VQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAIIRVA 78 VQL VR VLAFGGYFYWDDLIL+G+AGT LL+PSYLFDDHDGH+MPGAFL+AG IIR A Sbjct 2 VQLAVRAVLAFGGYFYWDDLILIGKAGTHNLLAPSYLFDDHDGHLMPGAFLLAGTIIRAA 61 Query 79 PLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWWAAAL 138 PL WT PA+SL+VLQLL SLALLRAL+VI WRPVLLIP TFALFTPLAVPGFAWWAAAL Sbjct 62 PLDWTWPAVSLLVLQLLASLALLRALHVILGWRPVLLIPFTFALFTPLAVPGFAWWAAAL 121 Query 139 NSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFAVAALQC 198 NSLP+LAALAWVC DAILLVRTGN RYA+TGVLVYLGGLLFFEK+AVIPFV+FAVAAL Sbjct 122 NSLPLLAALAWVCGDAILLVRTGNRRYALTGVLVYLGGLLFFEKSAVIPFVAFAVAALLR 181 Query 199 HVRGDR---SALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWDLLCRS 255 HV GD SAL VWRAG+RLW PSLALT WV LYLAVV+QRRWSSD+ MT LL RS Sbjct 182 HVAGDAGPGSALRAVWRAGLRLWVPSLALTAAWVGLYLAVVNQRRWSSDVVMTGRLLVRS 241 Query 256 VTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPVWLT 315 +THGIVP LAGGPW W RWAPASPWATPP +VM LGWL L VLA+SL+RKRRIGPVWLT Sbjct 242 ITHGIVPGLAGGPWHWDRWAPASPWATPPPLVMALGWLALAGVLAVSLLRKRRIGPVWLT 301 Query 316 AAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNR-AGTRWLD 374 AAGYAVACQVPI+LMRSS TALELAQTLRY PDLVVVLALLAAVAL APNR AG RWLD Sbjct 302 AAGYAVACQVPIYLMRSSKQTALELAQTLRYLPDLVVVLALLAAVALCAPNRPAGPRWLD 361 Query 375 ASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKN--AQASLAAAASGAPLLD 432 ASP R + A LFL SSLYSTATFL SWRDNP + YL+N A + A AAS APLLD Sbjct 362 ASPKRTIVACGLAALFLASSLYSTATFLTSWRDNPAQPYLRNARAALAAAHAASDAPLLD 421 Query 433 QEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIA 492 QEVDPLVLQRVA PENLASH+FALLR RPEFA+ TTQLRM S+GRL+ A+VTWVRTI Sbjct 422 QEVDPLVLQRVAAPENLASHLFALLRDRPEFASATTQLRMLDSSGRLIRARVTWVRTITP 481 Query 493 GPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVHPG 552 GP+PQCGYF QPDRP RL+LDGPLLP DWTVELNYLANSDGSM L+++ GP KVPVHPG Sbjct 482 GPMPQCGYFAQPDRPARLVLDGPLLPADWTVELNYLANSDGSMTLSMTQGPPVKVPVHPG 541 Query 553 LNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 LNRV+ARLPGAGDAITVRANTTAL+LC+ + PVGFLAPA Sbjct 542 LNRVFARLPGAGDAITVRANTTALALCLASGPVGFLAPA 580 >gi|15827008|ref|NP_301271.1| hypothetical protein ML0203 [Mycobacterium leprae TN] gi|221229486|ref|YP_002502902.1| hypothetical protein MLBr_00203 [Mycobacterium leprae Br4923] gi|3097238|emb|CAA18815.1| putative membrane protein [Mycobacterium leprae] gi|13092555|emb|CAC29711.1| putative membrane protein [Mycobacterium leprae] gi|219932593|emb|CAR70296.1| putative membrane protein [Mycobacterium leprae Br4923] Length=569 Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/569 (77%), Positives = 476/569 (84%), Gaps = 3/569 (0%) Query 26 VLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAIIRVAPLVWTGP 85 +LAF GYFYWDDLIL+G+ GT GLLS SYLFDDHDGH+MP AFLVAGA+IR+APLVWTGP Sbjct 1 MLAFRGYFYWDDLILIGKTGTQGLLSASYLFDDHDGHLMPAAFLVAGALIRLAPLVWTGP 60 Query 86 AISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWWAAALNSLPMLA 145 AISLV LQLL SL LLRALYVI WR VLLIPLTF LFTPLAVPGFAWWAAALNSLPMLA Sbjct 61 AISLVFLQLLVSLTLLRALYVILGWRRVLLIPLTFGLFTPLAVPGFAWWAAALNSLPMLA 120 Query 146 ALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFAVAALQCHVRGDRS 205 AL WVCADAILLV TGNHRYA TGV+VY GGLLFFEKAAVIPFV+FAVAAL HVRGD + Sbjct 121 ALGWVCADAILLVCTGNHRYAATGVMVYCGGLLFFEKAAVIPFVAFAVAALLRHVRGDHA 180 Query 206 ALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWDLLCRSVTHGIVPALA 265 AL TVWR G+RLW SL LTV WV LYLAV++Q+RWS DLSMT LL RS+THGIVP LA Sbjct 181 ALRTVWRDGLRLWITSLTLTVIWVTLYLAVINQQRWSFDLSMTGQLLLRSITHGIVPGLA 240 Query 266 GGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPVWLTAAGYAVACQV 325 GGPW W RWAPASPWA PP +VM LGWL+LI VLALSLV K+RI VWLTAAGY V CQ+ Sbjct 241 GGPWHWDRWAPASPWAAPPPLVMALGWLLLIGVLALSLVHKQRIRLVWLTAAGYTVTCQL 300 Query 326 PIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNRA-GTRWLDASPARAVATV 384 PI+LMRSS TALELAQTLRY PDLV+VLALL A+A APNRA RWLD SP R T Sbjct 301 PIYLMRSSQQTALELAQTLRYLPDLVIVLALLTAIAFHAPNRAFAARWLDTSPTRTGVTT 360 Query 385 ASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAA--AASGAPLLDQEVDPLVLQR 442 A LFL SSLYST TFL SWRDNPT+ YL+N +A LAA AAS APLLD EVD LVLQR Sbjct 361 GIAGLFLASSLYSTVTFLTSWRDNPTQLYLQNVRADLAAMHAASSAPLLDSEVDQLVLQR 420 Query 443 VAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIAGPVPQCGYFV 502 VAWPENLASHMFALLR RPEFA+ T+ L M S+G L++A+VTW+RTI+AG P CGYFV Sbjct 421 VAWPENLASHMFALLRDRPEFASATSHLMMLNSSGSLIEARVTWIRTIVAGLTPHCGYFV 480 Query 503 QPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVHPGLNRVYARLPG 562 +PDRP R++LDGPLLP DWTVELNYLAN DG M L+L+ GP KVPVHPGLNRVYARLPG Sbjct 481 RPDRPTRMMLDGPLLPADWTVELNYLANRDGLMTLSLTQGPSVKVPVHPGLNRVYARLPG 540 Query 563 AGDAITVRANTTALSLCIGAAPVGFLAPA 591 AGDAITV ANTT LSLCI + PVGFLAPA Sbjct 541 AGDAITVLANTTTLSLCIASGPVGFLAPA 569 >gi|120406338|ref|YP_956167.1| hypothetical protein Mvan_5390 [Mycobacterium vanbaalenii PYR-1] gi|119959156|gb|ABM16161.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=587 Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust. Identities = 440/587 (75%), Positives = 483/587 (83%), Gaps = 3/587 (0%) Query 6 MPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMP 65 M RVA A LI +QLV+R VLAFGGYFYWDDLILVGRAGT GLLSP YLFDDHDGHVMP Sbjct 1 MNRVARAAAALIALQLVIRAVLAFGGYFYWDDLILVGRAGTQGLLSPGYLFDDHDGHVMP 60 Query 66 GAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTP 125 GAFLVAG I R+APL W GPAISLV+L SLALLRALYVI WRPVLL+PLTFALFTP Sbjct 61 GAFLVAGVITRLAPLEWIGPAISLVILASAASLALLRALYVILGWRPVLLVPLTFALFTP 120 Query 126 LAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAV 185 LAVPGFAWWAA LNSLPMLAA+AWVCADAILLVRTGN RYA TG LV+ GGLLFFEK+A+ Sbjct 121 LAVPGFAWWAAGLNSLPMLAAMAWVCADAILLVRTGNQRYAWTGTLVFFGGLLFFEKSAI 180 Query 186 IPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDL 245 IPFV+F VAAL HV G + + VWR G RLWT +LA+T W+ +YL VVDQ+RWS DL Sbjct 181 IPFVAFTVAALYGHVTGT-ATVRQVWRRGARLWTAALAVTAAWIGVYLLVVDQQRWSFDL 239 Query 246 SMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVR 305 +MTWDLL RS THGI P L GGPWDW RWAPASPWATPP VMVLGW L AV+A+SL+R Sbjct 240 AMTWDLLSRSFTHGIAPGLVGGPWDWQRWAPASPWATPPPAVMVLGWSTLAAVVAVSLLR 299 Query 306 KRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAP 365 KRRIGPVWL A GYAVACQVP++LMRSS FTALELAQTLRY PDLVVVLALLAAV L AP Sbjct 300 KRRIGPVWLAALGYAVACQVPVYLMRSSRFTALELAQTLRYLPDLVVVLALLAAVGLCAP 359 Query 366 NRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASL--AA 423 NR RWLD S R V TV +A F+ SSLYST+TFL SWRDNP + YL+NA+A L A Sbjct 360 NRDRARWLDHSTRRTVVTVCAATAFVVSSLYSTSTFLTSWRDNPAQPYLQNARAGLARAH 419 Query 424 AASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAK 483 A+S AP+LDQEVDPLVLQRVAWPENLASHMFALLR RPEFA+ TT LRM + G LVDAK Sbjct 420 ASSDAPMLDQEVDPLVLQRVAWPENLASHMFALLRDRPEFASATTDLRMLDTAGNLVDAK 479 Query 484 VTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGP 543 VTWVRTI GP +CGY VQPD P R+ LDGPLLP DWTVE+NYL NSDGSM ++LS+G Sbjct 480 VTWVRTIRPGPDARCGYLVQPDFPVRMPLDGPLLPADWTVEINYLGNSDGSMTVSLSEGD 539 Query 544 ERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAP 590 E KVPV PGLNRVY RLPGAGDAITV ANT ALS+C+ + PVGF+AP Sbjct 540 EVKVPVRPGLNRVYVRLPGAGDAITVSANTAALSVCVASGPVGFVAP 586 >gi|315446268|ref|YP_004079147.1| hypothetical protein Mspyr1_47710 [Mycobacterium sp. Spyr1] gi|315264571|gb|ADU01313.1| hypothetical protein Mspyr1_47710 [Mycobacterium sp. Spyr1] Length=589 Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/585 (75%), Positives = 486/585 (84%), Gaps = 3/585 (0%) Query 9 VALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAF 68 VA A LI + LVVR VLAFGGYFYWDDLILVGRAGT GLLSP YLFDDHDGHVMPGAF Sbjct 5 VARAAGALIALHLVVRAVLAFGGYFYWDDLILVGRAGTQGLLSPGYLFDDHDGHVMPGAF 64 Query 69 LVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAV 128 LVAGAI R+APL W GPA+SLVVL ++ SLALLRALYVI WRPVLL+PLTFALFTPLA+ Sbjct 65 LVAGAITRMAPLDWAGPAVSLVVLAVVASLALLRALYVILGWRPVLLVPLTFALFTPLAL 124 Query 129 PGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPF 188 P FAWWAA LN+LPMLAA+AWVCADAILL+RTGN RYA++G LV+LGGLLFFEKAA+IPF Sbjct 125 PSFAWWAAGLNALPMLAAMAWVCADAILLLRTGNQRYALSGALVFLGGLLFFEKAAIIPF 184 Query 189 VSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMT 248 V+F V AL HV + ++ VWR G RLWT +LALT GWV +YL VVDQ+RWS DLSMT Sbjct 185 VAFTVTALYGHVTAT-AGVSQVWRRGARLWTATLALTAGWVGVYLLVVDQQRWSFDLSMT 243 Query 249 WDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRR 308 WDLL RS THGIVP L GGPWDW RWAPASPWATPP +VMV+GW+ L AV+ ++L+RKRR Sbjct 244 WDLLRRSFTHGIVPGLVGGPWDWQRWAPASPWATPPVIVMVVGWVALAAVVVVTLLRKRR 303 Query 309 IGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNRA 368 +GPVWL A GYAVACQVPI+LMRSS FTALELAQTLRY PDLV+VLALLAAV L APNR Sbjct 304 LGPVWLAALGYAVACQVPIYLMRSSRFTALELAQTLRYLPDLVLVLALLAAVGLCAPNRE 363 Query 369 GTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASG- 427 +RWLD SP R +A LF+ SSLYSTATFL SWRDNP + YL+NA++ LA A +G Sbjct 364 RSRWLDRSPWRTLAIACCTALFVMSSLYSTATFLTSWRDNPAQPYLQNARSGLAQAHAGS 423 Query 428 -APLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTW 486 AP+LDQEVDPLVLQRVAWPENLASHMFALL RPEFA+TTT LR STGRL DA+VTW Sbjct 424 DAPMLDQEVDPLVLQRVAWPENLASHMFALLPERPEFASTTTDLRTLDSTGRLTDAQVTW 483 Query 487 VRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERK 546 VR+I GP CGY VQPD+P R+ LDGPLLP DWTVE+NYL NSDGSM L+LS+G E + Sbjct 484 VRSIRPGPEQGCGYLVQPDQPVRMPLDGPLLPADWTVEINYLGNSDGSMTLSLSEGEEVR 543 Query 547 VPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 VPV PGLNRV+ RLPGAGDAIT ANT ALS+CI A PVGF+APA Sbjct 544 VPVEPGLNRVFVRLPGAGDAITASANTAALSVCIAAGPVGFVAPA 588 >gi|145221992|ref|YP_001132670.1| hypothetical protein Mflv_1400 [Mycobacterium gilvum PYR-GCK] gi|145214478|gb|ABP43882.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=589 Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/585 (75%), Positives = 485/585 (83%), Gaps = 3/585 (0%) Query 9 VALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAF 68 VA A LI + LVVR VLAFGGYFYWDDLILVGRAGT GLLS YLFDDHDGHVMPGAF Sbjct 5 VARAAGALIALHLVVRAVLAFGGYFYWDDLILVGRAGTQGLLSWGYLFDDHDGHVMPGAF 64 Query 69 LVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAV 128 LVAGAI R+APL W GPA+SLVVL ++ SLALLRALYVI WRPVLL+PLTFALFTPLA+ Sbjct 65 LVAGAITRMAPLDWAGPAVSLVVLAVVASLALLRALYVILGWRPVLLVPLTFALFTPLAL 124 Query 129 PGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPF 188 P FAWWAA LN+LPMLAA+AWVCADAILL+RTGN RYA++G LV+LGGLLFFEKAA+IPF Sbjct 125 PSFAWWAAGLNALPMLAAMAWVCADAILLLRTGNQRYALSGALVFLGGLLFFEKAAIIPF 184 Query 189 VSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMT 248 V+F V AL HV + ++ VWR G RLWT +LALT GWV +YL VVDQ+RWS DLSMT Sbjct 185 VAFTVTALYGHVTAT-AGVSQVWRRGARLWTATLALTAGWVGVYLLVVDQQRWSFDLSMT 243 Query 249 WDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRR 308 WDLL RS THGIVP L GGPWDW RWAPASPWATPP +VMV+GW+ L AV+ ++L+RKRR Sbjct 244 WDLLRRSFTHGIVPGLVGGPWDWQRWAPASPWATPPVIVMVVGWVALAAVVVVTLLRKRR 303 Query 309 IGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNRA 368 +GPVWL A GYAVACQVPI+LMRSS FTALELAQTLRY PDLV+VLALLAAV L APNR Sbjct 304 LGPVWLAALGYAVACQVPIYLMRSSRFTALELAQTLRYLPDLVLVLALLAAVGLCAPNRE 363 Query 369 GTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASG- 427 +RWLD SP R +A LF+ SSLYSTATFL SWRDNP + YL+NA++ LA A +G Sbjct 364 RSRWLDRSPWRTLAIACCTALFVMSSLYSTATFLTSWRDNPAQPYLQNARSGLAQAHAGS 423 Query 428 -APLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTW 486 AP+LDQEVDPLVLQRVAWPENLASHMFALL RPEFA+TTT LR STGRL DA+VTW Sbjct 424 DAPMLDQEVDPLVLQRVAWPENLASHMFALLPERPEFASTTTDLRTLDSTGRLTDAQVTW 483 Query 487 VRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERK 546 VR+I GP CGY VQPD+P R+ LDGPLLP DWTVE+NYL NSDGSM L+LS+G E + Sbjct 484 VRSIRPGPEQGCGYLVQPDQPVRMPLDGPLLPADWTVEINYLGNSDGSMTLSLSEGEEVR 543 Query 547 VPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 VPV PGLNRV+ RLPGAGDAIT ANT ALS+CI A PVGF+APA Sbjct 544 VPVEPGLNRVFVRLPGAGDAITASANTAALSVCIAAGPVGFVAPA 588 >gi|108801753|ref|YP_641950.1| hypothetical protein Mmcs_4790 [Mycobacterium sp. MCS] gi|108772172|gb|ABG10894.1| conserved hypothetical protein [Mycobacterium sp. MCS] Length=601 Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/583 (74%), Positives = 470/583 (81%), Gaps = 2/583 (0%) Query 8 RVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGA 67 RVA AV LI V LVVR VLAFGGYFYWDDLIL+GRAGT GLLSPS+LFDDHDGHVMP A Sbjct 20 RVARAAVGLIAVHLVVRAVLAFGGYFYWDDLILIGRAGTQGLLSPSFLFDDHDGHVMPAA 79 Query 68 FLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLA 127 FL++GAI RVAP W PA+SLVVLQLL SLALLR L+VI WRPVLL+PLTFALFTPLA Sbjct 80 FLLSGAITRVAPWSWVLPALSLVVLQLLASLALLRTLHVILGWRPVLLLPLTFALFTPLA 139 Query 128 VPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIP 187 VPGFAWWAAALNSLPMLAALAWVCADAILLVRTG RYAVT + VY+GGLLFFEKAAVIP Sbjct 140 VPGFAWWAAALNSLPMLAALAWVCADAILLVRTGRRRYAVTALAVYVGGLLFFEKAAVIP 199 Query 188 FVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSM 247 FV+FAVAAL HV GDR A+ +VWR G+RLW P+LA+T WV +YL VVDQ+RWS DL+M Sbjct 200 FVAFAVAALLAHVTGDRGAVVSVWRRGIRLWVPALAVTAAWVGVYLLVVDQKRWSFDLAM 259 Query 248 TWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKR 307 TWDLL RS+TH IVP L GGPWDW RWAPASPWATPPA VMVLGW L V+A+S RK+ Sbjct 260 TWDLLARSITHAIVPGLVGGPWDWQRWAPASPWATPPATVMVLGWAALAVVVAVSFARKQ 319 Query 308 RIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNR 367 RIGPVW A GYAVACQVPI+LMRSS FTALELAQTLRY PDLVVVLALL AV APNR Sbjct 320 RIGPVWAVAVGYAVACQVPIYLMRSSRFTALELAQTLRYLPDLVVVLALLMAVGFCAPNR 379 Query 368 AGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASG 427 AG R LDAS R VA F+ SSLYST TF WRD+P Y+ NA+A LA Sbjct 380 AGARRLDASRRRTAVVVALVGAFVVSSLYSTVTFHRIWRDSPVPAYVANARAGLAGVDE- 438 Query 428 APLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWV 487 P+LDQEVDPL+LQRVA PENLASHMFAL RPEFA +TTQLRM +G +VDA VTWV Sbjct 439 -PMLDQEVDPLILQRVAAPENLASHMFALFDDRPEFAPSTTQLRMLAPSGHVVDALVTWV 497 Query 488 RTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKV 547 R I GP P CGY VQPD P R+ LDGPLLP DWT E+NYLANSDGS+ +ALS+GPE KV Sbjct 498 RAIRPGPEPNCGYLVQPDFPVRMPLDGPLLPADWTAEINYLANSDGSLMMALSEGPEVKV 557 Query 548 PVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAP 590 PV PGLNRV+ RLPGAGDAI V A+T ALS+CI PVGF+AP Sbjct 558 PVRPGLNRVFVRLPGAGDAINVSASTAALSVCISPGPVGFVAP 600 >gi|126437740|ref|YP_001073431.1| hypothetical protein Mjls_5176 [Mycobacterium sp. JLS] gi|126237540|gb|ABO00941.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=571 Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/572 (74%), Positives = 464/572 (82%), Gaps = 2/572 (0%) Query 19 VQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAIIRVA 78 + LVVR VLAFGGYFYWDDLIL+GRAGT GLLSPS+LFDDHDGHVMP AFL++GAI RVA Sbjct 1 MHLVVRAVLAFGGYFYWDDLILIGRAGTQGLLSPSFLFDDHDGHVMPAAFLLSGAITRVA 60 Query 79 PLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWWAAAL 138 P W PA+SLVVLQLL SLALLR L+VI WRPVLL+PLTFALFTPLAVPGFAWWAAAL Sbjct 61 PWSWVLPALSLVVLQLLASLALLRTLHVILGWRPVLLLPLTFALFTPLAVPGFAWWAAAL 120 Query 139 NSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFAVAALQC 198 NSLPMLAALAWVCADAILLVRTG RYAVT + VY+GGLLFFEKAAVIPFV+FAVAAL Sbjct 121 NSLPMLAALAWVCADAILLVRTGRRRYAVTALAVYVGGLLFFEKAAVIPFVAFAVAALLA 180 Query 199 HVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWDLLCRSVTH 258 HV GDR A+ +VWR G+RLW P+LA+T WV +YL VVDQ+RWS DL+MTWDLL RS+TH Sbjct 181 HVTGDRGAVVSVWRRGIRLWVPALAVTAAWVGVYLLVVDQKRWSFDLAMTWDLLARSITH 240 Query 259 GIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPVWLTAAG 318 IVP L GGPWDW RWAPASPWATPPA VMVLGW L V+A+S RK+RIGPVW A G Sbjct 241 AIVPGLVGGPWDWQRWAPASPWATPPATVMVLGWAALAVVVAVSFARKQRIGPVWAVAVG 300 Query 319 YAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNRAGTRWLDASPA 378 YAVACQVPI+LMRSS FTALELAQTLRY PDLVVVLALL AV APNRAG R LDAS Sbjct 301 YAVACQVPIYLMRSSRFTALELAQTLRYLPDLVVVLALLMAVGFCAPNRAGARRLDASRR 360 Query 379 RAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASGAPLLDQEVDPL 438 R VA F+ SSLYST TF WRD+P Y+ NA+A LA P+LDQEVDPL Sbjct 361 RTAVVVALVGAFVVSSLYSTVTFHRIWRDSPVPAYVANARAGLAGVDE--PMLDQEVDPL 418 Query 439 VLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIAGPVPQC 498 +LQRVA PENLASHMFAL RPEFA +TTQLRM +G++VDA VTWVR I GP P C Sbjct 419 ILQRVAAPENLASHMFALFDDRPEFAPSTTQLRMLDPSGQVVDALVTWVRAIRPGPEPNC 478 Query 499 GYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVHPGLNRVYA 558 GY VQPD P R+ LDGPLLP DWT E+NYLANSDGS+ +ALS+GPE KVPV PGLNRV+ Sbjct 479 GYLVQPDFPVRMPLDGPLLPADWTAEINYLANSDGSLMMALSEGPEVKVPVRPGLNRVFV 538 Query 559 RLPGAGDAITVRANTTALSLCIGAAPVGFLAP 590 RLPGAGDAI V A+T ALS+CI PVGF+AP Sbjct 539 RLPGAGDAINVSASTAALSVCISPGPVGFVAP 570 >gi|119870904|ref|YP_940856.1| hypothetical protein Mkms_4876 [Mycobacterium sp. KMS] gi|119696993|gb|ABL94066.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=571 Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/572 (74%), Positives = 463/572 (81%), Gaps = 2/572 (0%) Query 19 VQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAIIRVA 78 + LVVR VLAFGGYFYWDDLIL+GRAGT GLLSPS+LFDDHDGHVMP AFL++GAI RVA Sbjct 1 MHLVVRAVLAFGGYFYWDDLILIGRAGTQGLLSPSFLFDDHDGHVMPAAFLLSGAITRVA 60 Query 79 PLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWWAAAL 138 P W PA+SLVVLQLL SLALLR L+VI WRPVLL+PLTFALFTPLAVPGFAWWAAAL Sbjct 61 PWSWVLPALSLVVLQLLASLALLRTLHVILGWRPVLLLPLTFALFTPLAVPGFAWWAAAL 120 Query 139 NSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFAVAALQC 198 NSLPMLAALAWVCADAILLVRTG RYAVT + VY+GGLLFFEKAAVIPFV+FAVAAL Sbjct 121 NSLPMLAALAWVCADAILLVRTGRRRYAVTALAVYVGGLLFFEKAAVIPFVAFAVAALLA 180 Query 199 HVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWDLLCRSVTH 258 HV GDR A+ +VWR G+RLW P+LA+T WV +YL VVDQ+RWS DL+MTWDLL RS+TH Sbjct 181 HVTGDRGAVVSVWRRGIRLWVPALAVTAAWVGVYLLVVDQKRWSFDLAMTWDLLARSITH 240 Query 259 GIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPVWLTAAG 318 IVP L GGPWDW RWAPASPWATPPA VMVLGW L V+A+S RK+RIGPVW A G Sbjct 241 AIVPGLVGGPWDWQRWAPASPWATPPATVMVLGWAALAVVVAVSFARKQRIGPVWAVAVG 300 Query 319 YAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNRAGTRWLDASPA 378 YAVACQVPI+LMRSS FTALELAQTLRY PDLVVVLALL AV APNRAG R LDAS Sbjct 301 YAVACQVPIYLMRSSRFTALELAQTLRYLPDLVVVLALLMAVGFCAPNRAGARRLDASRR 360 Query 379 RAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASGAPLLDQEVDPL 438 R VA F+ SSLYST TF WRD+P Y+ NA+A LA P+LDQEVDPL Sbjct 361 RTAVVVALVGAFVVSSLYSTVTFHRIWRDSPVPAYVANARAGLAGVDE--PMLDQEVDPL 418 Query 439 VLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIAGPVPQC 498 +LQRVA PENLASHMFAL RPEFA +TTQLRM +G +VDA VTWVR I GP P C Sbjct 419 ILQRVAAPENLASHMFALFDDRPEFAPSTTQLRMLAPSGHVVDALVTWVRAIRPGPEPNC 478 Query 499 GYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVHPGLNRVYA 558 GY VQPD P R+ LDGPLLP DWT E+NYLANSDGS+ +ALS+GPE KVPV PGLNRV+ Sbjct 479 GYLVQPDFPVRMPLDGPLLPADWTAEINYLANSDGSLMMALSEGPEVKVPVRPGLNRVFV 538 Query 559 RLPGAGDAITVRANTTALSLCIGAAPVGFLAP 590 RLPGAGDAI V A+T ALS+CI PVGF+AP Sbjct 539 RLPGAGDAINVSASTAALSVCISPGPVGFVAP 570 >gi|333992561|ref|YP_004525175.1| transmembrane protein [Mycobacterium sp. JDM601] gi|333488529|gb|AEF37921.1| transmembrane protein [Mycobacterium sp. JDM601] Length=595 Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/570 (73%), Positives = 457/570 (81%), Gaps = 2/570 (0%) Query 23 VRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAIIRVAPLVW 82 VR V+AFGGYFYWDDLIL+GRAGT LLSPSYLFDDHDGHVMPGAFL+AG + R+ PL W Sbjct 25 VRAVVAFGGYFYWDDLILIGRAGTHELLSPSYLFDDHDGHVMPGAFLLAGVLSRLWPLQW 84 Query 83 TGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWWAAALNSLP 142 PA SLVVLQLL SLALLRAL VI WRPVLL+PL FALF PL +P FAWWAAALNSLP Sbjct 85 AAPAASLVVLQLLASLALLRALRVILGWRPVLLVPLVFALFCPLGLPAFAWWAAALNSLP 144 Query 143 MLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFAVAALQCHVRG 202 M AALAWVCADAILL RTGN RYA+TG + Y GGLLFFEKAAVIPFV+F V AL HV G Sbjct 145 MCAALAWVCADAILLARTGNRRYALTGTVAYAGGLLFFEKAAVIPFVAFTVCALLHHVAG 204 Query 203 DRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWDLLCRSVTHGIVP 262 R A+A WRAG RLW +LA+T GW+A+YLAVV+QRRWS DL MT DLL RSVTHGIVP Sbjct 205 GRGAVAATWRAGARLWAATLAVTGGWIAVYLAVVNQRRWSLDLDMTRDLLWRSVTHGIVP 264 Query 263 ALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPVWLTAAGYAVA 322 +LAGGPW WARWAPASPWA P VM LGWLVL +LA+S RK R+ PVWL AAGYA A Sbjct 265 SLAGGPWTWARWAPASPWALPGPAVMALGWLVLAGLLAVSSARKHRLVPVWLAAAGYAAA 324 Query 323 CQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNRAGTRWLDASPARAVA 382 CQVPI+LMRSS FTALELAQTLRY DLVVVLA+L AV + APNR +RWLDASP R Sbjct 325 CQVPIYLMRSSAFTALELAQTLRYLADLVVVLAILGAVGMCAPNRDASRWLDASPWRTAV 384 Query 383 TVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAA--ASGAPLLDQEVDPLVL 440 AV F SSLYSTATFLA WRD+P YL NA +LAAA S APLLDQEVDPLVL Sbjct 385 VSCLAVTFTASSLYSTATFLARWRDDPARPYLHNALPALAAARVESDAPLLDQEVDPLVL 444 Query 441 QRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIAGPVPQCGY 500 QRV +PENLASH+FAL+R RPEFA+ T +LRM TS G L DA+VTWVR+I+AGPVPQCGY Sbjct 445 QRVVYPENLASHLFALVRDRPEFASATPRLRMLTSAGTLTDAQVTWVRSIVAGPVPQCGY 504 Query 501 FVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVHPGLNRVYARL 560 VQPD P L LDGPLLP DWT E+NYLAN DG+M L+LSDGP+ +V V PGLNRVY RL Sbjct 505 LVQPDLPVTLGLDGPLLPADWTAEINYLANVDGAMTLSLSDGPDVRVRVRPGLNRVYVRL 564 Query 561 PGAGDAITVRANTTALSLCIGAAPVGFLAP 590 PG G +T RA+T ALS+CI + P+G++AP Sbjct 565 PGGGHNVTARADTAALSVCIASGPLGYVAP 594 >gi|118472669|ref|YP_890364.1| hypothetical protein MSMEG_6143 [Mycobacterium smegmatis str. MC2 155] gi|118173956|gb|ABK74852.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=587 Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/588 (73%), Positives = 474/588 (81%), Gaps = 5/588 (0%) Query 6 MPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMP 65 M VA A LI +QLVVR VLAFGGYFYWDDLILVGRAGT LLSPS+LFDDHDGHVMP Sbjct 1 MNWVARTAAALIALQLVVRAVLAFGGYFYWDDLILVGRAGTQSLLSPSFLFDDHDGHVMP 60 Query 66 GAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTP 125 AFLV+G I R+AP W PA+SLVVLQLL SLALLRAL+VI WRPVLL+PLTFALFTP Sbjct 61 AAFLVSGVITRLAPFSWVWPALSLVVLQLLVSLALLRALWVILGWRPVLLVPLTFALFTP 120 Query 126 LAVPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAV 185 LAVPGFAWWAAALNSLPMLAALAWV +A+LLVRTG R+AV G LVY GGLLFFEKAAV Sbjct 121 LAVPGFAWWAAALNSLPMLAALAWVAGEAVLLVRTGRVRHAVIGALVYFGGLLFFEKAAV 180 Query 186 IPFVSFAVAALQCHVRGD---RSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWS 242 IPFV+FAV AL +V + S LA VWR G+RLW LALT W+ +YL VVDQ+RWS Sbjct 181 IPFVAFAVVALLGYVTSEFDLASGLAEVWRRGLRLWVACLALTAAWIGVYLTVVDQKRWS 240 Query 243 SDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALS 302 DL+MT DLL RS+THGIVP LAGGPW W RWAPASPWATPP VMVLGW+VL+A +A+ Sbjct 241 FDLAMTGDLLSRSITHGIVPGLAGGPWQWQRWAPASPWATPPVTVMVLGWIVLVAAVAVV 300 Query 303 LVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVAL 362 L+RK+RI PV AAGYAVACQVPI+LMRSS FTALELAQTLRY PDLV+VLALL AV Sbjct 301 LLRKQRIWPVLAVAAGYAVACQVPIYLMRSSRFTALELAQTLRYLPDLVMVLALLTAVGF 360 Query 363 QAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLA 422 APNR + WL AS AR+V V AVLF+ SSLYST TFL WRD+P YL NA+ASL Sbjct 361 CAPNRE-SPWLSASRARSVVVVGVAVLFVASSLYSTWTFLRVWRDSPVPAYLDNARASL- 418 Query 423 AAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDA 482 A+ S APLL+QEVDPL+LQRVA+PENLASHMFAL RPEFA+ TT LRMF TG LV A Sbjct 419 ASTSDAPLLEQEVDPLILQRVAYPENLASHMFALTSPRPEFASATTDLRMFDRTGTLVPA 478 Query 483 KVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDG 542 VTWVRTI+ GP P CG+ VQ + P + LDGPLLP DWT E+NYLANSDGS+ +ALS+G Sbjct 479 LVTWVRTILPGPQPNCGHLVQTEEPVVMPLDGPLLPADWTAEINYLANSDGSLTMALSEG 538 Query 543 PERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAP 590 P+ KVPV PGLNRV+ RLPGAGDAITVRANT+ALS+CI PVGFLAP Sbjct 539 PDVKVPVRPGLNRVFVRLPGAGDAITVRANTSALSVCISPGPVGFLAP 586 >gi|289748149|ref|ZP_06507527.1| transmembrane protein [Mycobacterium tuberculosis T92] gi|289688736|gb|EFD56165.1| transmembrane protein [Mycobacterium tuberculosis T92] Length=341 Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/341 (99%), Positives = 341/341 (100%), Gaps = 0/341 (0%) Query 251 LLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIG 310 +LCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIG Sbjct 1 MLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIG 60 Query 311 PVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNRAGT 370 PVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNRAGT Sbjct 61 PVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNRAGT 120 Query 371 RWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASGAPL 430 RWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASGAPL Sbjct 121 RWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASGAPL 180 Query 431 LDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTI 490 LDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTI Sbjct 181 LDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTI 240 Query 491 IAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVH 550 IAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVH Sbjct 241 IAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVH 300 Query 551 PGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 PGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA Sbjct 301 PGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 341 >gi|169627606|ref|YP_001701255.1| hypothetical protein MAB_0502c [Mycobacterium abscessus ATCC 19977] gi|169239573|emb|CAM60601.1| Conserved hypothetical transmembrane protein [Mycobacterium abscessus] Length=596 Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/569 (63%), Positives = 421/569 (74%), Gaps = 3/569 (0%) Query 23 VRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAIIRVAPLVW 82 VR VLAFGG FYWDDLILVGRAGT L +PSYLFDDHDGHVMP AFL+AG I + APL W Sbjct 29 VRGVLAFGGDFYWDDLILVGRAGTQDLFAPSYLFDDHDGHVMPAAFLLAGMITKFAPLNW 88 Query 83 TGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWWAAALNSLP 142 PA+SLVVLQ L SLALLRAL+ I WRPVL++PLTF LFTPLAVPGF WWAAALNSLP Sbjct 89 FWPAVSLVVLQALASLALLRALWAILGWRPVLVVPLTFTLFTPLAVPGFTWWAAALNSLP 148 Query 143 MLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFAVAALQCHVRG 202 MLAA+ W AD +LL RTG+ RYA + V+L GLLFFEK+ VIPFV+FAV AL ++RG Sbjct 149 MLAAMCWFVADVVLLDRTGDRRYAAAAMGVFLAGLLFFEKSVVIPFVAFAVLALLAYLRG 208 Query 203 DR-SALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWDLLCRSVTHGIV 261 S+L WR G +W P+ ALT W+ LYL VVDQ+RWS+DLSMTW LL RS THG++ Sbjct 209 HGWSSLTRTWRRGALVWIPAGALTGAWIVLYLVVVDQKRWSTDLSMTWSLLQRSFTHGVL 268 Query 262 PALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPVWLTAAGYAV 321 P L GGPW W RW P+SPWA P + V+ LG L L + L+ RK+R+G VW+T GY V Sbjct 269 PGLVGGPWRWDRWVPSSPWAEPSSFVIGLGALALGTTILLTCYRKQRLGLVWVTLLGYLV 328 Query 322 ACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNRAGTRWLDASPARAV 381 A +VPI+LMR+S FTAL LAQTLRY PDLVVV ALLAAV L APNR G+ LD+S R Sbjct 329 ASEVPIYLMRASAFTALLLAQTLRYLPDLVVVAALLAAVGLTAPNRPGSGRLDSSAKRTT 388 Query 382 ATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASGAPLLDQEVDPLVLQ 441 A LF+ SSL ST +L SWR+NP Y+ +ASLAA A+G +LDQEVDPLVLQ Sbjct 389 AVALVLALFVASSLVSTVAYLRSWRNNPASSYIATVKASLAAVATGPAVLDQEVDPLVLQ 448 Query 442 RVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIAGPVPQCGYF 501 V PENL SHMFAL+ RPE +TTTQLRM G L+DA+VTWVR I GPV CGY Sbjct 449 NVVRPENLLSHMFALVHPRPEIGSTTTQLRMLDRNGHLLDAQVTWVRAITEGPVSGCGYL 508 Query 502 VQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVHPGLNRVYARLP 561 VQ + L L+GPLLP DW VELNYLAN++G++ + ++GP+ +VPV PGLNRV+ RLP Sbjct 509 VQST--QTLPLNGPLLPADWIVELNYLANTEGAVWASFTNGPKVRVPVRPGLNRVFIRLP 566 Query 562 GAGDAITVRANTTALSLCIGAAPVGFLAP 590 G+G+AI ++ T +LSLC+ PVG LAP Sbjct 567 GSGNAIILQPITQSLSLCVAVGPVGALAP 595 >gi|325675031|ref|ZP_08154718.1| hypothetical protein HMPREF0724_12500 [Rhodococcus equi ATCC 33707] gi|325554617|gb|EGD24292.1| hypothetical protein HMPREF0724_12500 [Rhodococcus equi ATCC 33707] Length=616 Score = 437 bits (1123), Expect = 3e-120, Method: Compositional matrix adjust. Identities = 272/564 (49%), Positives = 342/564 (61%), Gaps = 5/564 (0%) Query 24 RVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAIIRVAPLVWT 83 R ++AF G FYWDDLILV R+G + S ++LF DHDGH MP AFL A VAPL WT Sbjct 47 RGIVAFAGDFYWDDLILVSRSGQYSVPSGAFLFYDHDGHFMPAAFLAAWLATAVAPLNWT 106 Query 84 GPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWWAAALNSLPM 143 PAI L+VLQ SLA+LR L ++ R VLL+PLTF LF+PL +P FAWWAA LNSLPM Sbjct 107 VPAIMLIVLQAGASLAVLRVLRLLLGTRAVLLLPLTFYLFSPLTLPSFAWWAAGLNSLPM 166 Query 144 LAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFAVAALQCHVRGD 203 LAWV DA+ L RTG R+AV+G +V L FFEK+ ++P V+FAV L V Sbjct 167 QIGLAWVAGDAVRLCRTGRMRFAVSGAIVAALSLAFFEKSVLVPIVAFAVVVLMYRVDDI 226 Query 204 RSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWDLLCRSVTHGIVPA 263 + T G LW P A+ W A YL + R + T LL + G++P Sbjct 227 DHPVRTALAKGRALWIPLAAVVACWAASYLVFTESRFVLPSATQTAGLLHHGTSLGVIPT 286 Query 264 LAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPVWLTAAGYAVAC 323 L GGPW W RW P+ PWAT P V++V GW+ + A LA SL + R G VW+ Y A Sbjct 287 LLGGPWAWDRWPPSPPWATSPLVLVVFGWVAVAAALAWSLRYRLRTGGVWIAMVAYVAAS 346 Query 324 QVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNRAGTRWLDASPARAVAT 383 + + L RS P TA ELAQTLRY D VVLA+ A+ ++AP R R L P AVA Sbjct 347 EAAMVLTRSGPDTAYELAQTLRYVADSAVVLAIGWALIVRAPRRESVRPLPKVPPVAVA- 405 Query 384 VASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASGAPLLDQEVDPLVLQRV 443 A +LF+ SSL+ST TF+ WRDNPT YL +A+ SLAA PLLDQ V VL V Sbjct 406 -ALTMLFVASSLWSTVTFVQRWRDNPTVDYLAHARQSLAANPD-TPLLDQPVSIWVLLPV 463 Query 444 AWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIAGPVPQCGYFVQ 503 A+P N SH+FA LR RPEFA T L++ +GRL+ A VT R + GP P CGY V+ Sbjct 464 AYPHNTTSHLFAPLRDRPEFARHTDYLQLLDDSGRLIPAAVTPTRNLGQGPEPGCGYRVE 523 Query 504 PDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPER-KVPVHPGLNRVYARLPG 562 + L LDGPL+ +WT +LNY A++DG + + L + VPV GLN+V+ RL G Sbjct 524 GEG-AVLPLDGPLIDWEWTAQLNYFASADGVVEVGLDRSDDTVTVPVEAGLNQVFVRLYG 582 Query 563 AGDAITVRANTTALSLCIGAAPVG 586 AG+ + + T L LC+GA PVG Sbjct 583 AGEGLRLTPETPGLELCVGAGPVG 606 >gi|226303658|ref|YP_002763616.1| hypothetical protein RER_01690 [Rhodococcus erythropolis PR4] gi|226182773|dbj|BAH30877.1| conserved hypothetical membrane protein [Rhodococcus erythropolis PR4] Length=593 Score = 431 bits (1109), Expect = 1e-118, Method: Compositional matrix adjust. Identities = 264/585 (46%), Positives = 346/585 (60%), Gaps = 13/585 (2%) Query 8 RVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGA 67 RVA +A +LI QLV+R +A YFYWDDLIL+GR G L S L DHDGH MP A Sbjct 16 RVAQLAFVLIGCQLVIRAWVAASNYFYWDDLILMGRGGRFPLFSSELLLYDHDGHFMPAA 75 Query 68 FLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLA 127 F G I R+AP W A LV+ Q SLALLR L ++ WRP LLIPL LF PL Sbjct 76 FFFTGLITRIAPYNWALSATLLVIGQAAASLALLRTLRLVLGWRPALLIPLILYLFVPLT 135 Query 128 VPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIP 187 +P F+WWAAALN+LP+ ALAW C DAI L RTG+ RY +G V++ LLFFEKA ++P Sbjct 136 LPSFSWWAAALNALPLQIALAWACGDAIKLYRTGHVRYVFSGTAVFVVSLLFFEKAVLVP 195 Query 188 FVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSM 247 FV+ A L +G+ + + + RLWT A+ W+ +YL V+ + SM Sbjct 196 FVALAFLVLYLRTQGEGTPIRSAVTKCRRLWTACAAVLAIWIPVYLTTVESPITGNGRSM 255 Query 248 TWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKR 307 + +LL + G++P L GGPW W RW P+ WA PP V++ W L+ + +++ +R Sbjct 256 STELLHHGTSLGMLPTLLGGPWRWERWIPSPAWADPPTVLVAAAWAALLTTVVMTVRARR 315 Query 308 RIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNR 367 +W AA Y +A V + RS T ELAQTLRYF D V AL AA+ L AP R Sbjct 316 GAAWIWAAAALYFLASVVAMTATRSDADTTYELAQTLRYFTDSATVFALAAALILAAPRR 375 Query 368 AGTRWLDASPARAVATVASAV--LFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAA 425 PAR VA+ + LF+ SSL ST TF+ WR+NPT YL NA+ SL + Sbjct 376 --------RPARIPVAVAAGLSALFVVSSLVSTVTFVDIWRENPTRDYLANARMSL-SQN 426 Query 426 SGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVT 485 APLL+Q V VL VA+P NLAS++ A L RPEF+++T LR +GR+VDA+VT Sbjct 427 QDAPLLEQPVAIEVLLPVAFPNNLASNVLAPLPDRPEFSSSTPILRTIDDSGRIVDAEVT 486 Query 486 WVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPER 545 W R I G P CG + + P LDGPL +WTV+LNYLA++DG++ +AL G Sbjct 487 WTRRIPEGAAPNCG--TRAEGPTEFPLDGPLAGWEWTVQLNYLASTDGTIDVALESGDAV 544 Query 546 KVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAP 590 VPV GL+ + RL G G+++ + T L+LC GA VG + P Sbjct 545 SVPVTQGLHSAFVRLVGHGNSVKITPTTPGLTLCFGAGQVGAVVP 589 >gi|54024399|ref|YP_118641.1| hypothetical protein nfa24300 [Nocardia farcinica IFM 10152] gi|54015907|dbj|BAD57277.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=605 Score = 430 bits (1106), Expect = 3e-118, Method: Compositional matrix adjust. Identities = 271/560 (49%), Positives = 339/560 (61%), Gaps = 7/560 (1%) Query 27 LAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAIIRVAPLVWTGPA 86 +A GYFYWDDLILVGRAG L S L DHDGH MP AF A + R APLVW G Sbjct 47 IAARGYFYWDDLILVGRAGRYDLFSADLLLHDHDGHFMPLAFATAWVLTRAAPLVWAGQV 106 Query 87 ISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWWAAALNSLPMLAA 146 +++VVLQL SLA+LR L V+ RPV+LIPL F LF PL +P F WWAAALN+LP+ A Sbjct 107 LTMVVLQLAASLAVLRMLLVLLGRRPVVLIPLAFYLFCPLTLPAFVWWAAALNALPLQIA 166 Query 147 LAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFAVAALQCHVRGDRSA 206 LAW+ ADA+ LVRTG R+A +G+ V + L FFEK+ V+PF +FA AAL HVRG Sbjct 167 LAWLIADAVRLVRTGRIRFAWSGIAVLVVALSFFEKSVVVPFTAFAAAALALHVRGIPRP 226 Query 207 LATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWDLLCRSVTHGIVPALAG 266 + TV R G LW S + GW A+YL+VVD D +L+ + G+VPAL G Sbjct 227 VRTVARRGRVLWLGSAVVLAGWAAVYLSVVDLTSEPHDRHEVGELVRSAAGLGVVPALFG 286 Query 267 GPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPVWLTAAGYAVACQVP 326 GPW W RW PA+PWA PP V+ W++ +AL L R+RR+ PV A GY V Q+P Sbjct 287 GPWRWERWVPATPWAAPPGWVVAACWVLAGLAVALVLARRRRVLPVLAAAIGYVVLAQLP 346 Query 327 IFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNRAGTRWLDASPARAVATVAS 386 + L+RS P TA E+ Q+LRY D+ VVL + AA+ +AP R G P R A Sbjct 347 LALLRSGPHTATEIMQSLRYLADVAVVLTVAAALVCRAPARRG----GPVPFRR-PAFAL 401 Query 387 AVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASGAPLLDQEVDPLVLQRVAWP 446 A +F+ SSL ST T+ SW N T YL A L APLL+QEV VL VA+P Sbjct 402 AAVFVASSLVSTLTYADSWWTNRTRTYLPTVAAEL--PRQDAPLLEQEVPWEVLAPVAYP 459 Query 447 ENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIAGPVPQCGYFVQPDR 506 +NL +FA + FA +T +LRM T G +VDA V W R I+ GP P C + V Sbjct 460 QNLTGQVFAPIAGEDAFADSTPRLRMITDDGHIVDAVVWWNRHILPGPEPGCDHRVAGPT 519 Query 507 PERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVHPGLNRVYARLPGAGDA 566 P L LDGP++ WT +LNYLA+ DG + +AL DG VPV G++ VY R+ G G A Sbjct 520 PVDLPLDGPMIENKWTAQLNYLADRDGRITVALGDGEPVVVPVRAGVHTVYVRVIGGGTA 579 Query 567 ITVRANTTALSLCIGAAPVG 586 + V A T L LC+G PVG Sbjct 580 LRVGAFTPGLGLCVGVGPVG 599 >gi|226363310|ref|YP_002781092.1| hypothetical protein ROP_39000 [Rhodococcus opacus B4] gi|226241799|dbj|BAH52147.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=593 Score = 429 bits (1102), Expect = 1e-117, Method: Compositional matrix adjust. Identities = 273/570 (48%), Positives = 347/570 (61%), Gaps = 5/570 (0%) Query 8 RVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGA 67 RV VA LI VQL+VR +A FYWDDLIL GR G+ LLS L DHDGH+MPGA Sbjct 15 RVLRVAAALIVVQLLVRTWVAANSDFYWDDLILAGRGGSLPLLSGDLLLYDHDGHLMPGA 74 Query 68 FLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLA 127 FLVAG R+AP W P ++++ LQ + S A+ R L I RPVLL+PL LF+PL Sbjct 75 FLVAGIATRIAPYQWVLPMLTMIALQAVASYAVFRLLRTILGLRPVLLVPLAIYLFSPLT 134 Query 128 VPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIP 187 VP FAWWAAALN+LP+ ALAWV DA+ L RTG RYAV+G LV + LLFFEK+ V+P Sbjct 135 VPAFAWWAAALNALPLQIALAWVAGDALKLCRTGRRRYAVSGTLVLIASLLFFEKSVVVP 194 Query 188 FVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSM 247 F +FA AL HV G + + + R G LW PS A+ W A+Y + V + + S Sbjct 195 FAAFATVALLGHVYGRKRPVRSTLRRGAALWIPSAAVLAVWAAIYFSTVASQWEWAGASR 254 Query 248 TWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKR 307 ++LL + G++P L GGPW W RW P+ PWA+P + V GW+VL+ + ++ KR Sbjct 255 AFELLHHGTSLGLLPTLVGGPWTWERWIPSPPWASPSTALEVAGWVVLVVAVVATVRVKR 314 Query 308 RIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNR 367 RIG VW+ AA Y + + + R T ELAQTLRYF D V+LA+ A+ ++AP R Sbjct 315 RIGGVWILAAAYFLLSVTAMVVTRWGADTTYELAQTLRYFTDTAVILAIAVALIVRAPRR 374 Query 368 AGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASG 427 D R VA F+ SSL+ST TF SW +NPT GYL A+ASL A + Sbjct 375 RA----DPVRVRPPVVVAVVAAFVASSLWSTYTFTRSWEENPTTGYLATARASL-AERND 429 Query 428 APLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWV 487 AP+L Q VL VA+P NL S + A LR RPEF+ +T LRM G +VDA+VTWV Sbjct 430 APILQQPTSIWVLLPVAYPNNLVSRVLAPLRDRPEFSDSTPDLRMIDDAGAVVDAQVTWV 489 Query 488 RTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKV 547 R I GPVP CG+ V E + LDGPL +WT ELNYLA +DG +A+A+ DG +V Sbjct 490 RAIEPGPVPDCGHLVDRRSFEPIPLDGPLTGWEWTAELNYLATADGEIAVAMEDGSPVRV 549 Query 548 PVHPGLNRVYARLPGAGDAITVRANTTALS 577 PV G N V+ RL G G ++ V T LS Sbjct 550 PVQRGPNSVFVRLTGGGQSLRVSTLTPNLS 579 >gi|229492856|ref|ZP_04386654.1| putative membrane protein [Rhodococcus erythropolis SK121] gi|229320296|gb|EEN86119.1| putative membrane protein [Rhodococcus erythropolis SK121] Length=591 Score = 426 bits (1095), Expect = 7e-117, Method: Compositional matrix adjust. Identities = 263/585 (45%), Positives = 344/585 (59%), Gaps = 13/585 (2%) Query 8 RVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGA 67 RV +A +LI QLV+RV +A YFYWDDLIL+GR G L S L DHDGH MP A Sbjct 16 RVTQLAFVLIGCQLVIRVWVAASNYFYWDDLILMGRGGRFPLFSSELLLYDHDGHFMPAA 75 Query 68 FLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLA 127 F G I R+AP W A LV+ Q SLALLR L ++ RP LLIPL LF PL Sbjct 76 FFFTGLIARIAPYNWALSATLLVIGQAAASLALLRTLRLVLGRRPALLIPLILYLFVPLT 135 Query 128 VPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIP 187 +P F+WWAAALN+LP+ ALAW C DAI L RTG RY +G V++ LLFFEKA ++P Sbjct 136 LPAFSWWAAALNALPLQIALAWACGDAIKLYRTGQVRYVFSGTAVFVVSLLFFEKAVLVP 195 Query 188 FVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSM 247 FV+ A L +G+ + + + LWT S A+ W+ +YL V+ SM Sbjct 196 FVALAFLVLYLRTQGEGTPIRSAVTKCRLLWTASAAVLAFWIPVYLTTVESPITGYGRSM 255 Query 248 TWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKR 307 + +LL + G++P L GGPW W RW P+ WA PP +++V W L+ +++ +R Sbjct 256 STELLHHGTSLGMLPTLLGGPWRWERWIPSPAWADPPTLLVVAAWAALLTTAVMTVRARR 315 Query 308 RIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNR 367 +W AA Y +A V + RS T ELAQTLRYF D V AL AA+ AP R Sbjct 316 GAAWIWAAAALYFLASVVAMTATRSDADTTYELAQTLRYFTDSATVFALAAALIFAAPRR 375 Query 368 AGTRWLDASPARAVATVAS--AVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAA 425 PAR VA+ +VLF+ SSL ST TF+ WR+NPT YL NA+ SL + Sbjct 376 --------RPARIPVAVAAGLSVLFVISSLVSTVTFVDIWRENPTRDYLANARMSL-SQN 426 Query 426 SGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVT 485 APLL+Q V VL VA+P NLAS++ A L RPEF+++T LR +G++VDA+VT Sbjct 427 QDAPLLEQPVAIEVLLPVAFPNNLASNVLAPLPDRPEFSSSTPILRTIDDSGQIVDAEVT 486 Query 486 WVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPER 545 W R I G P CG + + P L LDGPL +WTV+LNYLA++DG++ +AL G Sbjct 487 WTRRIPEGTAPNCG--TRAEGPTELPLDGPLAGWEWTVQLNYLASADGTIDVALESGDAV 544 Query 546 KVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAP 590 VPV GL+ V+ RL G G+++ + T +LC GA VG + P Sbjct 545 SVPVTQGLHSVFVRLVGHGNSVKITPTTPGPTLCFGAGQVGAVVP 589 >gi|111021004|ref|YP_703976.1| hypothetical protein RHA1_ro04021 [Rhodococcus jostii RHA1] gi|110820534|gb|ABG95818.1| possible membrane protein [Rhodococcus jostii RHA1] Length=593 Score = 422 bits (1086), Expect = 6e-116, Method: Compositional matrix adjust. Identities = 274/583 (47%), Positives = 351/583 (61%), Gaps = 5/583 (0%) Query 8 RVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGA 67 RV VA L+ VQL+VR +A FYWDDLIL GR G+ LLS L DHDGH+MPGA Sbjct 15 RVLQVAAALVVVQLLVRTWVAANSDFYWDDLILAGRGGSLPLLSADLLLYDHDGHLMPGA 74 Query 68 FLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLA 127 FLVAG R+AP W P ++++ LQ + S A+ R L I RPVLL+PL LF+PL Sbjct 75 FLVAGIATRLAPYEWILPMLTMIALQAVASYAVFRLLRTILGPRPVLLVPLAIYLFSPLT 134 Query 128 VPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIP 187 VP FAWWAAALN+LP+ ALAWV DA+ L RTG RYAV+G LV + LLFFEK+ ++P Sbjct 135 VPAFAWWAAALNALPLQIALAWVARDALELCRTGRRRYAVSGTLVLIASLLFFEKSVLVP 194 Query 188 FVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSM 247 FV+FA AL +V + + R G LW PS A+ W A Y++ V + + S Sbjct 195 FVAFATVALLAYVGERERPVRSTLRRGAALWVPSAAVLAVWAAFYVSTVASQWEWAGASR 254 Query 248 TWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKR 307 ++L + G++P GGPW W RW P+ PWA+P + V+GW+VL+A + ++ KR Sbjct 255 AFELFHHGTSLGLLPTFVGGPWTWDRWIPSPPWASPSTALEVVGWVVLVAAVVATVRLKR 314 Query 308 RIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNR 367 RIG VW+ A Y + + + R T ELAQTLRYF D V+LA+ AV +AP R Sbjct 315 RIGWVWILTAAYFLLSVTAMVVTRWGADTTYELAQTLRYFTDTAVILAIGVAVIARAPRR 374 Query 368 AGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASG 427 D R + V + V F+ SSL+ST TF SW +NPT YL A+ASL A Sbjct 375 RA----DPVRVRPLVAVTAVVAFVASSLWSTYTFTRSWEENPTTAYLATARASL-AERDD 429 Query 428 APLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWV 487 AP+L Q VL VA+P NL S +FA LR RP F+ +T LRM G +VDA+VTWV Sbjct 430 APILQQPASIWVLLPVAYPNNLVSRVFAPLRDRPAFSDSTPDLRMIDDAGSVVDAQVTWV 489 Query 488 RTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKV 547 R I GPVP CG V L LDGPL +WT +LNY+A +DG +A+A+ G +V Sbjct 490 RAIEPGPVPDCGNLVDQRSFVSLPLDGPLTGWEWTAQLNYMATADGEIAVAMEVGSPVRV 549 Query 548 PVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAP 590 PV G N V+ RL G G ++ V T LSLCIGA PVG + P Sbjct 550 PVQRGPNSVFVRLTGGGQSVRVSTLTPDLSLCIGAGPVGVVVP 592 >gi|312138067|ref|YP_004005403.1| integral membrane protein [Rhodococcus equi 103S] gi|311887406|emb|CBH46718.1| putative integral membrane protein [Rhodococcus equi 103S] Length=616 Score = 418 bits (1075), Expect = 1e-114, Method: Compositional matrix adjust. Identities = 273/564 (49%), Positives = 342/564 (61%), Gaps = 5/564 (0%) Query 24 RVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAIIRVAPLVWT 83 R ++AF G FYWDDLILV R+G + S ++LF DHDGH MP AFL A VAPL WT Sbjct 47 RGIVAFAGDFYWDDLILVSRSGQYSVPSGAFLFYDHDGHFMPAAFLAAWLATAVAPLNWT 106 Query 84 GPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWWAAALNSLPM 143 PAI L+VLQ SLA+LR L ++ R VLL+PLTF LF+PL +P FAWWAA LNSLPM Sbjct 107 VPAIMLIVLQAGASLAVLRVLRLLLGTRAVLLLPLTFYLFSPLTLPSFAWWAAGLNSLPM 166 Query 144 LAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFAVAALQCHVRGD 203 LAWV DAI L RTG R+AV+G +V L FFEK+ ++P V+FAV L V Sbjct 167 QIGLAWVAGDAIRLCRTGRMRFAVSGAIVAALSLAFFEKSVLVPIVAFAVVVLMYRVDDI 226 Query 204 RSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWDLLCRSVTHGIVPA 263 + T G LW P A+ W A YL + R + T LL + G++P Sbjct 227 DHPVRTALAKGRALWIPLAAVVACWAASYLVFTESRFVLPSATQTAGLLHHGTSLGVIPT 286 Query 264 LAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPVWLTAAGYAVAC 323 L GGPW W RW P+ PWATPP V++V GW+ + A LA SL + R G VW+ Y A Sbjct 287 LLGGPWAWDRWPPSPPWATPPIVLVVFGWVAVAAALAWSLRYRLRTGGVWIAMVAYVAAS 346 Query 324 QVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNRAGTRWLDASPARAVAT 383 + + L RS P TA ELAQTLRY D VVLA+ A+ ++AP R R L P VA Sbjct 347 EAAMVLTRSGPDTAYELAQTLRYVADSTVVLAIGWALIVRAPRRESVRSLPKVPPVVVA- 405 Query 384 VASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASGAPLLDQEVDPLVLQRV 443 A +LF+ SSL+ST TF+ WRDNPT YL +A+ SLAA PLLDQ V VL V Sbjct 406 -ALTMLFVASSLWSTVTFVQRWRDNPTVDYLAHARQSLAANPD-TPLLDQPVSIWVLLPV 463 Query 444 AWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIAGPVPQCGYFVQ 503 A+P N SH+FA LR RPEFA T L++ +GRL+ A VT R + GP CGY V+ Sbjct 464 AYPHNTTSHLFAPLRDRPEFARHTDYLQLLDDSGRLIPAAVTPTRNLGQGPETGCGYRVE 523 Query 504 PDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPER-KVPVHPGLNRVYARLPG 562 + L LDGPL+ +WT +LNY A++DG +A+ L + VPV GLN+V+ RL G Sbjct 524 GEG-AVLPLDGPLIDWEWTAQLNYFASADGVVAVGLDRSDDTVTVPVEAGLNQVFVRLYG 582 Query 563 AGDAITVRANTTALSLCIGAAPVG 586 AG+ + + T L LC+GA PVG Sbjct 583 AGEGLRLTPETPGLELCVGAGPVG 606 >gi|296395143|ref|YP_003660027.1| hypothetical protein Srot_2763 [Segniliparus rotundus DSM 44985] gi|296182290|gb|ADG99196.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length=587 Score = 372 bits (955), Expect = 1e-100, Method: Compositional matrix adjust. Identities = 238/566 (43%), Positives = 311/566 (55%), Gaps = 13/566 (2%) Query 27 LAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAIIRVAPLVWTGPA 86 +A+ G FYWDDL+L GRA T + S YL HDGHVMPGAFLVAG ++APL W Sbjct 32 VAWRGGFYWDDLVLAGRASTSAIWSQGYLLASHDGHVMPGAFLVAGVTTKLAPLQWAPAF 91 Query 87 ISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWWAAALNSLPMLAA 146 I L+VLQ L SLA+LR + ++ WRPV + + LFTPL +P F WW+AALN+LP+ A Sbjct 92 IELLVLQALASLAVLRLVRLVLGWRPVTVALFAWYLFTPLTLPSFVWWSAALNALPLHAG 151 Query 147 LAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFAVAALQCHVRGDRSA 206 LAWV + +LLVRT R+A+ VL + L FFEKA +IPF + A+A L + G Sbjct 152 LAWVAGETLLLVRTQRPRHAMRAVLGFAAALAFFEKALLIPFAATAIAVLDMRIAGRHRP 211 Query 207 LATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWS-SDLSMTWDLLCRSVTHGIVPALA 265 + T R +LW A+ W A R + L + + + G++PA+ Sbjct 212 IRTTLRRSRQLWAGHAAVMSLWAAAVCCWASPPRSGLAPLRIITETFWEANVRGLLPAVF 271 Query 266 GGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPVWLTAAGYAVACQV 325 GGP W R P A PP+ + + V+A+S R R G WL GYA AC+ Sbjct 272 GGPLSWKRQQPIVAVAEPPSAFAAAALIATVLVVAVSARRAARGGAAWLVFFGYAAACET 331 Query 326 PIFLMRSSPFTALELAQTLRYFPDLVVVL-ALLAAVALQAPNRAGTRWLDASPARAVATV 384 + L R + E+ +LRY D VVL A LA +A + R G + Sbjct 332 VMLLWRINLDPDPEVGLSLRYVADCAVVLVASLAMLARASSQRRGQ----------RRAL 381 Query 385 ASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASGAPLLDQEVDPLVLQRVA 444 A+A L STA F W NPT YL + L AA PLLDQ V VL ++ Sbjct 382 AAAGALCCVGLVSTAAFDDIWSQNPTNAYLATVRREL-AANRATPLLDQPVPYTVLSWMS 440 Query 445 WPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIAGPVPQCGYFVQP 504 +P+NL SH+FA +R RP FAT+TT L GR V +V+ VRTI GPVP CG V+P Sbjct 441 YPDNLMSHVFAAVRERPPFATSTTVLHFVDDQGRFVPGQVSSVRTIQQGPVPGCGARVEP 500 Query 505 DRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVHPGLNRVYARLPGAG 564 L LDGPLL WT +LNY A+ DG + + L G ++VPV GL+ V+ RL GAG Sbjct 501 QTARALPLDGPLLDWQWTAQLNYFASVDGDVEVRLPTGAAQRVPVASGLHTVFVRLDGAG 560 Query 565 DAITVRANTTALSLCIGAAPVGFLAP 590 A+ VR T LSLC+G+ PVG + P Sbjct 561 SAVIVRPITPGLSLCVGSGPVGAVWP 586 >gi|343927251|ref|ZP_08766729.1| hypothetical protein GOALK_087_00530 [Gordonia alkanivorans NBRC 16433] gi|343762868|dbj|GAA13655.1| hypothetical protein GOALK_087_00530 [Gordonia alkanivorans NBRC 16433] Length=600 Score = 372 bits (954), Expect = 1e-100, Method: Compositional matrix adjust. Identities = 249/593 (42%), Positives = 336/593 (57%), Gaps = 24/593 (4%) Query 9 VALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAF 68 ++++AV LI QL++R L G FYWDDL+L+ RA + +LS YL HDGH MP AF Sbjct 7 MSMIAVALIAGQLIIRGWLVATGNFYWDDLVLIARASSNPILSWEYLGHSHDGHFMPAAF 66 Query 69 LVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVIS-SWRPVLLIPLTFALFTPLA 127 L+AG +AP+ W PA++L+VLQ + S+A+ R + VI+ + R L+ L F LF+P+ Sbjct 67 LLAGVATWLAPVNWALPALTLIVLQAIASVAVWRMIRVIAPAARAGALVALAFYLFSPMT 126 Query 128 VPGFAWWAAALNSLPMLAALAWVCADAILLVRTG---NHRYAV--TGVLVYLGGLLFFEK 182 VP FAWWA+ LN+LPM AALAW+ ADA+ L R R AV +V++ L FFEK Sbjct 127 VPAFAWWASGLNTLPMQAALAWIVADAVGLARGDIDPERRRAVWIRSTVVFVVALAFFEK 186 Query 183 AAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWS 242 + I ++F A L R+AL RAG LW+ +T WV +Y D + Sbjct 187 SLFILPIAFVAAVLASG--AGRTALTATLRAGRELWSSLAVVTALWVVVYFVTADPFAGN 244 Query 243 SDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALS 302 + + L+ RSV H IVP+L GGPW+W RW P P P ++V GWLVL AV + Sbjct 245 HSVGQSARLVWRSVNHAIVPSLVGGPWEWDRWTPGPPTGFPATWMIVAGWLVLAAVTWWA 304 Query 303 LVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLA---- 358 + R+R P+ AA YAVA Q+P+ RSSP TA+ LAQ +RY PD +V A+ Sbjct 305 VSRRRGAVPIIAFAALYAVAAQIPVMWNRSSPETAVALAQHMRYLPDTALVFAIAIALLA 364 Query 359 ---AVALQAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLK 415 + AP R + + SPA + V +A L + S++ S +F ASWRDNPT YLK Sbjct 365 GARSTTAPAPERRHSA-EEKSPAVLLVPVVAA-LAMVSAVVSLVSFSASWRDNPTGDYLK 422 Query 416 NAQASLAAAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTS 475 A A+L A A LLDQ V +LQ V +P+N S +F + RPEF T+T +L + + Sbjct 423 TAVATLHDNAE-ATLLDQSVPLEILQPVVYPDNQISRIFGRVDPRPEFGTSTDRLLVLDT 481 Query 476 TGRLVDAKVTWVRTIIAGPVPQCGYFVQPD--RPERLILDGPLLPGDWTVELNYLANSDG 533 G + VT R + AG G +P+ P RL LDGPL P WTV L+Y A DG Sbjct 482 AGNAMPGGVTQRRLVGAG----LGNCARPEVSGPTRLALDGPLFPWPWTVALSYCATRDG 537 Query 534 SMALALSDGPERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVG 586 + + L G +V V GL +Y RL G GDAI++R T L L GA VG Sbjct 538 EVEMKLDGGQAMRVTVRLGLGSIYVRLDGGGDAISIRPVTAGLRLHTGAGRVG 590 >gi|333919156|ref|YP_004492737.1| hypothetical protein AS9A_1485 [Amycolicicoccus subflavus DQS3-9A1] gi|333481377|gb|AEF39937.1| hypothetical protein AS9A_1485 [Amycolicicoccus subflavus DQS3-9A1] Length=611 Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 254/595 (43%), Positives = 334/595 (57%), Gaps = 23/595 (3%) Query 13 AVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAG 72 A+ LI LV+R + G FYWDD IL+GRA L S LF DHDGH MP F A Sbjct 22 ALALIVAGLVLRGWVLSRGSFYWDDFILIGRAAEFPLFSADLLFHDHDGHFMPLTFAAAW 81 Query 73 AIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFA 132 + VAPL W A SL++LQLL SLA+LR L V+ WRPVL +PLTF L +PL +P FA Sbjct 82 LLTAVAPLEWWAAAASLLILQLLASLAVLRLLVVLLGWRPVLFVPLTFYLLSPLTLPAFA 141 Query 133 WWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFA 192 WWAA LN+LP+ AALAWV AD + L+ T RYAV+ ++ +L LLFFEKAAV+PF +FA Sbjct 142 WWAAGLNALPLQAALAWVTADTVRLIETRRRRYAVSALVAFLIALLFFEKAAVVPFAAFA 201 Query 193 VAALQCHV-RGDRSA-------LATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSD 244 VA L V + R A A V R G LW S + + W+ +Y V + Sbjct 202 VALLWVWVTQKPRDAGASRANPFAFVARGGRELWIGSAVILLWWIPVYSMAVSRDVGFDG 261 Query 245 LSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLV 304 L +L R+ T VP L GGPW W RW P++PWA P V W L A++ S+V Sbjct 262 LKSAGTILNRTFTDSFVPVLFGGPWTWERWLPSTPWAAAPQWATVACWAALAAIVGGSIV 321 Query 305 RKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQA 364 KRR+ PV+ A Y + +P+ ++R+ P TA EL Q+LRY + V++ A+ A Sbjct 322 LKRRVIPVFAFVAAYIIVATIPVLVLRAGPDTAPELVQSLRYLAETSVIVVAAIALVFVA 381 Query 365 PNRAG--TRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLA 422 P R G RW P R A VA A F+ SS++ST TF W +NP+ YL N + Sbjct 382 PGREGLNARW---HPGRKAAAVAVAA-FILSSVWSTVTFSQVWSENPSREYLTNLR---G 434 Query 423 AAASGAP--LLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLV 480 A + AP LLDQEV +L + +P+N+AS + A L R F ++LRM GRLV Sbjct 435 ATDTDAPVQLLDQEVPWNLLSPLTFPQNMASRVLAPLDDRVRFGPVVSELRMVDDRGRLV 494 Query 481 DAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALAL- 539 A+V W R I GP P+CGY + P P + L G + WT +LNY +N G + +A Sbjct 495 AAEVWWNRAIPQGPDPECGYRITPGAPVAVPLGGGMFEHGWTAQLNYFSNGPGELVVAFD 554 Query 540 SDGPER---KVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 S ER VP+ GLN Y RL G +++ T + +C+G+ PVG A A Sbjct 555 SIAGERSAVSVPIEEGLNTAYVRLVGGAESLLFTTPTPGVEICLGSGPVGVAAHA 609 >gi|326383700|ref|ZP_08205385.1| hypothetical protein SCNU_12212 [Gordonia neofelifaecis NRRL B-59395] gi|326197464|gb|EGD54653.1| hypothetical protein SCNU_12212 [Gordonia neofelifaecis NRRL B-59395] Length=616 Score = 356 bits (914), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 243/601 (41%), Positives = 323/601 (54%), Gaps = 27/601 (4%) Query 8 RVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGA 67 ++ VA+ LI Q+VVR VL G FYWDDLIL+GRA + +LS YL HDGH MP A Sbjct 12 KLGAVALALIAAQIVVRAVLVIWGNFYWDDLILIGRASSYPILSWDYLGYSHDGHFMPAA 71 Query 68 FLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVIS-SWRPVLLIPLTFALFTPL 126 FLVAG +AP+ W PA++LVVLQ + SLA+ R + +I+ R L LTF LF P+ Sbjct 72 FLVAGLTTVIAPVQWWLPALTLVVLQAVASLAVWRMIRIIAPRARGWALAALTFYLFVPM 131 Query 127 AVPGFAWWAAALNSLPMLAALAWVCADAILLVRTG-----NHRYAVTGVLVYLGGLLFFE 181 V + WWAA LN+LPM AA+A V +AI+LVR + R + V ++ LLFFE Sbjct 132 TVSAYVWWAAGLNTLPMQAAMAVVVGNAIVLVRDQPDAARSRRLMIGAVAAFVVALLFFE 191 Query 182 KAAVIPFVSFAVA--ALQCHVRGDRSALATVWRAGV---------RLWTPSLALTVGWVA 230 K+ I V+F AL+ +R T +R+ V LW + V W A Sbjct 192 KSLFILPVAFVAGLLALRGSMRPQWHGEETDYRSSVLSQTFLRARTLWLTLAGVFVAWSA 251 Query 231 LYLAVVDQRRWSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVL 290 L+LA T L+ RS+ I+P+L GGPW W RW P+ P P ++ L Sbjct 252 LFLATSTATAGVHSFGQTAHLVWRSINDAIIPSLVGGPWVWDRWTPSPPMGFPSVWMIAL 311 Query 291 GWLVLIAVLALSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDL 350 GW+VL+ ++ ++ KR +W A YAV Q+P+ RSS TALELAQT+RY PD Sbjct 312 GWIVLVVLIVVTSRAKRGAPLIWFCALLYAVGAQIPVMWNRSSTNTALELAQTMRYLPDT 371 Query 351 VVVLALLAAVALQAPNRAGTRWLDA---SPARAVATVASAVLFLTSSLYSTATFLASWRD 407 +VL + A+ AP G D P A A V S VLF S++ +T +F SWRD Sbjct 372 ALVLTIALALIAAAPRDLGAHLADKPAPDPRLAYAGVVSCVLFAVSAMVATMSFGQSWRD 431 Query 408 NPTEGYLKNAQASLAAAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTT 467 +PT YL A+ASL A G + DQ V VL VA P N+ SH+F LR RP+F T Sbjct 432 DPTGDYLVTARASL-AEMDGKTMFDQPVPLEVLLPVAHPNNMISHVFGRLRERPDFGNVT 490 Query 468 TQLRMFTSTGRLVDAKVTWVRTIIAGPVPQCGYFVQP--DRPERLILDGPLLPGDWTVEL 525 L++ G+LV V+ RT P G +P D P RL L GPL+ WTV Sbjct 491 DDLKVLNPKGQLVAGAVSPQRTF----EPSRGSCARPGIDEPTRLRLSGPLIDWQWTVGF 546 Query 526 NYLANSDGSMALALSDGPERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPV 585 +Y A+ G++ + L G +VPV GL+ Y +L G G + +R T L L G V Sbjct 547 SYCADRAGTVEIRLEGGDPVQVPVQAGLHAAYVQLDGRGTELRIRPVTPGLKLHTGDGRV 606 Query 586 G 586 G Sbjct 607 G 607 >gi|262201308|ref|YP_003272516.1| hypothetical protein Gbro_1336 [Gordonia bronchialis DSM 43247] gi|262084655|gb|ACY20623.1| hypothetical protein Gbro_1336 [Gordonia bronchialis DSM 43247] Length=648 Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 246/624 (40%), Positives = 323/624 (52%), Gaps = 50/624 (8%) Query 9 VALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAF 68 V ++AV LIT QLV+R L G FYWDDLIL+GRA + + S YL HDGH MP AF Sbjct 30 VVVLAVTLITAQLVIRGWLVATGNFYWDDLILIGRASSMPIGSWEYLGHSHDGHFMPAAF 89 Query 69 LVAGAIIRVAPLVWTGPAISLVVLQLLESLALLR-ALYVISSWRPVLLIPLTFALFTPLA 127 LVAG +AP+ W PA +L+VLQ + S+A+ R + + L LTF LFTP+ Sbjct 90 LVAGISTVLAPVTWALPAATLIVLQAVASVAVWRMIRIIAPAAGIAALAALTFYLFTPMT 149 Query 128 VPGFAWWAAALNSLPMLAALAWVCADAILLVRTGN-----HRYAVTGVLVYLGGLLFFEK 182 VP F WWAA LN+LPM AA+AW+ DA+L RT R V L++L L FFEK Sbjct 150 VPAFTWWAAGLNTLPMQAAIAWIVGDAVLACRTDTDDATRRRITVRSALIFLIALTFFEK 209 Query 183 AAVIPFVSFAVAALQCHVRGDR-------------------SALATVWRAGVRLWTPSLA 223 + I V+ A L R S LA RLW Sbjct 210 SLFILPVALVTATLSVAASRRRTETGDDDGAGDDADLAETMSPLAAAVVRARRLWAALAV 269 Query 224 LTVGWVALYLAVVDQRRWSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATP 283 + V WV ++ +V D + T L+ RSV +VP+L GGPW+W RW P+ P Sbjct 270 IFVVWVIIFFSVSDATAGVHSAAQTARLVWRSVNRAVVPSLVGGPWEWGRWNPSPPMGFA 329 Query 284 PAVVMVLGWLVLIAVLALSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQT 343 +++ GWLV+ V+ +++R+ V L A Y V Q+P+ RSS TALELAQT Sbjct 330 SWWMILAGWLVVAGVVIWAVLRRHGAFAVLLAAGAYVVVAQIPVMWNRSSDNTALELAQT 389 Query 344 LRYFPDLVVVLALLAAV-------ALQAPNRAGTRWLD----ASPARAVATVASAVLFLT 392 +RY PD +VL A+ +++A G R ASPA + V A+ + Sbjct 390 MRYLPDSALVLTAALALLIAAPARSVRAAATTGARHAKTAETASPATVLVAVLIALAAAS 449 Query 393 SSLYSTATFLASWRDNPTEGYLKNAQASLAAAASGAPLLDQEVDPLVLQRVAWPENLASH 452 +++ S A F SWRDNPT YL A+ SLAA P+ DQ + VL VA+P N SH Sbjct 450 ATI-SLAGFGDSWRDNPTGDYLATAKRSLAANTE-HPMFDQSLPLEVLLPVAYPNNQISH 507 Query 453 MFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIAGPVPQCGYFVQPDRPE---- 508 F LR RP FA++T +L + + G LV VT R I AG C DRPE Sbjct 508 TFGRLRDRPPFASSTDRLVVLDTAGELVPGAVTAQRNIAAGR-GAC------DRPEVTGP 560 Query 509 -RLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVHPGLNRVYARLPGAGDAI 567 +L LDGPL+ WT+ L Y AN G + L DG V V GL+ VY +L G+G + Sbjct 561 TQLPLDGPLIRWRWTIALGYCANRSGEVEFRLDDGTAHTVAVQAGLHVVYVQLDGSGRTL 620 Query 568 TVRANTTALSLCIGAAPVGFLAPA 591 T+R T L+L G VG + A Sbjct 621 TLRPLTEGLALHTGQGRVGEVVEA 644 >gi|296141010|ref|YP_003648253.1| hypothetical protein Tpau_3330 [Tsukamurella paurometabola DSM 20162] gi|296029144|gb|ADG79914.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=591 Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 233/582 (41%), Positives = 313/582 (54%), Gaps = 18/582 (3%) Query 13 AVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAG 72 A LL+ VQL VR + G FYWDD++ + R+G LL P F D+DGH+MP A A Sbjct 20 AALLVAVQLAVRGYVLARGNFYWDDVVFLSRSGRP-LLDPGAWFVDYDGHLMPAALFTAA 78 Query 73 AIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFA 132 +APL W A SL++LQL+ +LA LRAL +++ RP++L+P F L PL +P A Sbjct 79 VTTTLAPLSWPAAAASLLLLQLVAALATLRALVIVAGRRPMVLVPFVFYLLAPLTLPAMA 138 Query 133 WWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFA 192 WWA+ LN+LP+ LA V + + +R GN R + VL L LLFFEKA IPFV+ A Sbjct 139 WWASGLNALPLQIGLAVVVGETVRYLR-GNRRSGLWAVLALLVTLLFFEKAIAIPFVAVA 197 Query 193 VAALQCHVRGD--RSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWD 250 L ++RG RSAL R G LW + VGW L+ + R +S T Sbjct 198 AVILARYLRGHPVRSAL----RRGRWLWLAFGVIVVGWFTLWSVLTASRPGEHTVSFTSY 253 Query 251 LLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIG 310 L RSV + PA GGPW W R P P A P VV V+G L + +LA++ R R Sbjct 254 ALYRSVESVLAPAALGGPWSWTRENPGPPVAVPNVVVTVIGLLAIAVILAVTWRRAPRGL 313 Query 311 PVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQAPNRAGT 370 W AA Y VA P+F +RSS FT+ L +LRYF D VL L A+ L A R Sbjct 314 AAWGAAAAYFVASLAPVFFLRSSEFTSALLPLSLRYFADFAWVLTLAGALVLIARRRRRG 373 Query 371 RWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASGAPL 430 +D A VA + F S+ +T F W DNPT YL + A + P+ Sbjct 374 --IDPR-----AWVAVVLAFAVSASVATVRFATVWSDNPTGSYLAQLRDG-ARVYADRPV 425 Query 431 LDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTI 490 LDQE+ V+ R+A+P+N SH+ A L +P F T++ + + GR V +V+ VR++ Sbjct 426 LDQEISTEVIARLAYPDNTLSHVLATLPEKPRFGTSSAEATVVDKQGRFVPGRVSRVRSV 485 Query 491 IAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSD-GPERKVPV 549 G +P CG V + L +GPL +W VELNYLA++DG + L G +VPV Sbjct 486 PVGDLPGCGTRVDGTQ-TLLRYEGPLAYWEWVVELNYLASADGVLVLQQERAGTSVRVPV 544 Query 550 HPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAPA 591 G + VY R+PGAG + RA + L C+ PVG L PA Sbjct 545 QRGPHTVYVRVPGAGGGLQARAESPGLFACVTGGPVGLLIPA 586 >gi|213964475|ref|ZP_03392675.1| putative membrane protein [Corynebacterium amycolatum SK46] gi|213952668|gb|EEB64050.1| putative membrane protein [Corynebacterium amycolatum SK46] Length=650 Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 189/614 (31%), Positives = 289/614 (48%), Gaps = 47/614 (7%) Query 15 LLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAI 74 ++I +QLV R+++ FYWDD I++G LLS YL DHDGH+ P AFL G Sbjct 45 VVIAIQLVARILVLTSHGFYWDDFIIIGHLYDTPLLSKDYLLQDHDGHLAPLAFLAQGLY 104 Query 75 IRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWW 134 +AP W PA ++ V+ ++ + A + +++ V L +T +TPL +PG WW Sbjct 105 HLIAPWNWWLPATTMAVMSVVLTYATAKLFELLTGRTLVSLFLITVVAWTPLMLPGDTWW 164 Query 135 AAALNSLPMLAALAWVCADAILLVRTGNHR------YAVTGVLVYLG-GLLFFEKAAVIP 187 +AA NS P LA+V I+ +RT R + G+ L L FFEK+ I Sbjct 165 SAAANSQPF--HLAFVIF-MIVAIRTTMRRSFGPRLWEAVGLFALLAVALGFFEKSLAIA 221 Query 188 FVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVA-LYLAVVDQRRWSSDLS 246 +S V ++ +R + V R G+ +W PS+ LT W Y + + SD Sbjct 222 PISMLVVITLAYM--ERRNILQVLRRGLVIWIPSMLLTGAWALWYYFGPAETTGFISD-K 278 Query 247 MTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRK 306 + +L + I + GGP W RWAP P+A+ + ++ LG ++L+ + A + R Sbjct 279 LQPELFFNGLGQ-IFAGIIGGPTSWERWAPGQPFASASSQLITLGGIILLILSATLIGRD 337 Query 307 RRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVALQA-- 364 R W + Y I L RS T+ LA TL Y+ D+ +V+ + A++L Sbjct 338 YRGWAPWTLSVAYMFTTLFAITLFRSGENTSGVLAHTLHYYSDVALVIVICVAISLAGLP 397 Query 365 PNRAGTRWLDASPARAVATVAS-AVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAA 423 P L PAR + S + +S S T+ +W D+ ++ N +ASL+A Sbjct 398 PKDEAPALL---PARTHILIWSLGIALAVTSTISVVTYRNAWSDDIAMEWIGNTKASLSA 454 Query 424 ----AASGAP-------LLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRM 472 A + P L+DQ V +L VA P N+ S +F + RP F T RM Sbjct 455 LREEADAAGPDKAIDYNLIDQPVPFEILVPVAAPMNMYSRVFDAVSDRPPFERVTGHPRM 514 Query 473 FTSTGRLVDAKVTWVRTIIAGPVPQCGYFVQPDR----PERLILDGPLLPGDWTVELNYL 528 F + G L+DAKV+ + + GPV QCG+ + E + L+ + GDW +E Sbjct 515 FNTDGSLIDAKVSEITRVTDGPVEQCGHRITVGEDGTASEDIKLENIIKLGDWVLEFPAT 574 Query 529 ANSDGSMALALSD---------GPERKVPVHPGLNRVYARLPGAGDA--ITVRANTTALS 577 A+ D + L+L + G V ++ L Y L G G+ + V T + Sbjct 575 ASEDMDVRLSLPNPFETEEQTRGGSTVVKMNNDLRPRYVYLNGGGNTLHVDVEKATPGAT 634 Query 578 LCIGAAPVGFLAPA 591 LCIGA +G L PA Sbjct 635 LCIGAGAIGPLVPA 648 >gi|302870420|ref|YP_003839057.1| hypothetical protein Micau_5978 [Micromonospora aurantiaca ATCC 27029] gi|302573279|gb|ADL49481.1| hypothetical protein Micau_5978 [Micromonospora aurantiaca ATCC 27029] Length=627 Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 182/604 (31%), Positives = 261/604 (44%), Gaps = 32/604 (5%) Query 8 RVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGA 67 RV VA+ LI V + R LA G+F D+ ++ + L P YL + H+MP Sbjct 33 RVRAVAIALIVVSVASRAGLAARGWFSQDEFVIAAQV-LDTRLDPDYLLGTFNNHLMPAG 91 Query 68 FLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLA 127 VA ++R A + L Q +AL R L + LL+PL+ LF+PL Sbjct 92 LAVAWLMVRAAGFAGWPWILLLAAGQAAVGIALYRLLRDLLRPGWGLLVPLSLFLFSPLT 151 Query 128 VPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIP 187 + + W L LP AL A + VRTG R+ V + GLLF KA +I Sbjct 152 LEVSSLWLVGLLVLPPQLALVLAVAAQVRYVRTGRRRHLVLVAFWLVFGLLFDTKALLIV 211 Query 188 FVSFAVAALQC-HVRGDRSALATVWRAGVRLWTPSLALTV---GWVALYLAV----VDQR 239 + F + A R RS ++TV VR W L LTV ++A YL +D+ Sbjct 212 PLLFLLTAFLFTKGRAWRSLVSTV----VRFWPAWLMLTVLSGAYLAYYLTRPARGLDE- 266 Query 240 RWSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVL 299 + + + L + +VP L GGPW W P + P + L W VL A++ Sbjct 267 --PTSVGQVFSFLGDLIGDTVVPGLLGGPWRWTYAGDGPPLSDPYDIAKWLSWAVLAALI 324 Query 300 ALSLVRKRRIGPVWLTAAGYAVACQVPIFLMR-SSPFTALELAQTLRYFPDLVVVLALLA 358 +++ R+ G WL A Y + R P L + RY D+V+V A+ Sbjct 325 VVTVRRRPSAGRAWLLLACYLGLVAALFAVTRLGGPLGPL-VGVVPRYVADVVLVAAICV 383 Query 359 AVALQAPNRAGTRWLDASP---------ARAVATVASAVLFLT---SSLYSTATFLASWR 406 VAL + A P A AV V+ VL T +L+STA F +W Sbjct 384 GVALLGMKDNDEDDVSAWPLPTVLREPGAFAVGLVSMVVLLATIGVGTLWSTARFGDNWS 443 Query 407 DNPTEGYLKNAQASLAAAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATT 466 YL QA LAAA G D V V+ WP+NL SH F RP F T Sbjct 444 TKHGRDYLATTQAELAAAPPGTVFFDTIVPDRVVAGYFWPDNLQSHFFRPAERRPTFVTM 503 Query 467 TTQLRMFTSTGRLVDAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELN 526 + + F GR+ V R + G V CG+ + R R+ +DG L+ + V Sbjct 504 SEKPSTFDENGRIRPVVVEG-RKVAPGTVEGCGHLAEGGRTTRIPMDGYLVEWPYVVHFG 562 Query 527 YLANSDGSMALALSDGPERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVG 586 Y+++ D + L D R++ + GLN V+ + GAG A+ + NT + LC +G Sbjct 563 YVSSGDSTAVFKLGDA-TREITLKSGLNDVFFMVEGAGSAVELTVNTPGVRLCTNLITIG 621 Query 587 FLAP 590 P Sbjct 622 RAVP 625 >gi|315503303|ref|YP_004082190.1| hypothetical protein ML5_2517 [Micromonospora sp. L5] gi|315409922|gb|ADU08039.1| hypothetical protein ML5_2517 [Micromonospora sp. L5] Length=627 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 182/604 (31%), Positives = 260/604 (44%), Gaps = 32/604 (5%) Query 8 RVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGA 67 RV VA+ LI V + R LA G+F D+ ++ + L P YL + H+MP Sbjct 33 RVRAVAIALIVVSVASRAGLAARGWFSQDEFVIAAQV-LDTRLDPDYLLGTFNNHLMPAG 91 Query 68 FLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLA 127 VA ++R A + L Q +AL R L + LL+PL+ LF+PL Sbjct 92 LAVAWLMVRAAGFAGWPWILLLAAGQAAVGIALYRLLRDLLRPGWGLLVPLSLFLFSPLT 151 Query 128 VPGFAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIP 187 + + W L LP AL A + VRTG R+ V + GLLF KA +I Sbjct 152 LEVSSLWLVGLLVLPPQLALVLAVAAQVRYVRTGRRRHLVLVAFWLVFGLLFDTKALLIV 211 Query 188 FVSFAVAALQC-HVRGDRSALATVWRAGVRLWTPSLALTV---GWVALYLAV----VDQR 239 + F + A R RS + TV VR W L LTV ++A YL +D+ Sbjct 212 PLLFLLTAFLFTKGRAWRSLVTTV----VRFWPAWLMLTVLSGAYLAYYLTRPARGLDE- 266 Query 240 RWSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVL 299 + + + L + +VP L GGPW W P + P + L W VL A++ Sbjct 267 --PTSVGQVFSFLGDLIGDTVVPGLLGGPWRWTYAGDGPPLSDPYDIAKWLSWAVLAALI 324 Query 300 ALSLVRKRRIGPVWLTAAGYAVACQVPIFLMR-SSPFTALELAQTLRYFPDLVVVLALLA 358 +++ R+ G WL A Y + R P L + RY D+V+V A+ Sbjct 325 VVTVRRRPSAGRAWLLLACYLGLVAALFAVTRLGGPLGPL-VGVVPRYVADVVLVAAICV 383 Query 359 AVALQAPNRAGTRWLDASP---------ARAVATVASAVLFLT---SSLYSTATFLASWR 406 VAL + A P A AV V+ VL T +L+STA F +W Sbjct 384 GVALLGMKDNDEDDVSAWPLPTVLREPGAFAVGLVSMVVLLATIGVGTLWSTARFGDNWS 443 Query 407 DNPTEGYLKNAQASLAAAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATT 466 YL QA LAAA G D V V+ WP+NL SH F RP F T Sbjct 444 TKHGRDYLATTQAELAAAPPGTVFFDTIVPDRVVAGYFWPDNLQSHFFRPAERRPTFVTM 503 Query 467 TTQLRMFTSTGRLVDAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELN 526 + + F GR+ V R + G V CG+ + R R+ +DG L+ + V Sbjct 504 SEKPSTFDENGRIRPVVVEG-RKVAPGTVEGCGHLAEGGRTTRIPMDGYLVEWPYVVHFG 562 Query 527 YLANSDGSMALALSDGPERKVPVHPGLNRVYARLPGAGDAITVRANTTALSLCIGAAPVG 586 Y+++ D + L D R++ + GLN V+ + GAG A+ + NT + LC +G Sbjct 563 YVSSGDSTAVFKLGDA-TREITLKSGLNDVFFMVEGAGSAVELTVNTPGVRLCTNLITIG 621 Query 587 FLAP 590 P Sbjct 622 RAVP 625 >gi|319951214|ref|ZP_08025052.1| integral membrane protein [Dietzia cinnamea P4] gi|319435113|gb|EFV90395.1| integral membrane protein [Dietzia cinnamea P4] Length=672 Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 129/338 (39%), Positives = 173/338 (52%), Gaps = 19/338 (5%) Query 260 IVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAVLALSLVRKRRIGPVWLTAAGY 319 + P L GGPW W RW P P A PP ++ G + +AVLA SL +RR G +W AA Y Sbjct 346 VAPTLGGGPWRWDRWHPGPPMADPPLAAVIAGAVACVAVLAWSLATRRRTGAIWAGAALY 405 Query 320 AVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLAAVAL-------QAPNRAGTRW 372 + V + + R+ P TA E+ QTLRY +L VVLA A+AL P R G W Sbjct 406 PLVPVVLVAVGRAGPDTAAEIVQTLRYHAELPVVLAAATALALAAPRRAHNTPTRGG--W 463 Query 373 LDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASGAPLLD 432 PA A V L SS ST T+ SW + P+ Y++ A+L PLLD Sbjct 464 ----PA---AGALGLVALLASSAVSTVTYRQSWAEQPSRDYVQPLLAALRDRTE--PLLD 514 Query 433 QEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIA 492 +++ P VL V P + S + A + + PE T + + + G + A V RT+ Sbjct 515 KDLPPEVLLPVTAPAHRLSWLLAGVPLVPEVGAWTREPVVIDAHGTMHPADVVPGRTLPQ 574 Query 493 GPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVHPG 552 GP P CG+ + D R+ LDGPL+ DW V L+ A +DG +++ L DG VPV G Sbjct 575 GPEPGCGHRIGADG-ARIELDGPLIGRDWVVRLHVFAEADGHVSVRLDDGEPAIVPVEAG 633 Query 553 LNRVYARLPGAGDAITVRANTTALSLCIGAAPVGFLAP 590 L VY RL G G +TV LC+G+ PVG L P Sbjct 634 LGTVYVRLVGGGSGLTVSPLGGLQELCLGSGPVGVLVP 671 Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 86/203 (43%), Positives = 116/203 (58%), Gaps = 1/203 (0%) Query 11 LVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLV 70 + V ++ VR+ +A G+FYWDDLIL G A P LF DHDGH+MPG + Sbjct 55 MACVFVVLAATGVRLWVAAAGWFYWDDLILHGLAARHAWPHPDLLFTDHDGHLMPGGMAL 114 Query 71 AGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPG 130 +APL + P + + +LQL+ AL R L+V+ S R +LL+PL AL PL +P Sbjct 115 IWLAAHLAPLDFRMPLLQIALLQLVSGAALARMLWVLLSGRTILLVPLAAALAIPLGLPA 174 Query 131 FAWWAAALNSLPMLAALAWVCADAILLVRTGNHRYAVTGVLVYLGGLLFFEKAAVIPFVS 190 WWAAALN+LP+ AA+AW A + L RTG R+AV + GLLF EKA ++P V+ Sbjct 175 ATWWAAALNALPLTAAMAWAVASMVQLARTGRTRHAVGAAVATALGLLFVEKALIVPVVA 234 Query 191 FAVAALQ-CHVRGDRSALATVWR 212 V G R+ L T+WR Sbjct 235 AVVLLGGWWTTSGTRTDLLTLWR 257 >gi|305679638|ref|ZP_07402448.1| putative membrane protein [Corynebacterium matruchotii ATCC 14266] gi|305660258|gb|EFM49755.1| putative membrane protein [Corynebacterium matruchotii ATCC 14266] Length=562 Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 169/604 (28%), Positives = 282/604 (47%), Gaps = 58/604 (9%) Query 1 MPAPRMPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHD 60 M PR R+ + AVL + +V+R V YWDDL++ + LS + LF +D Sbjct 1 MSFPRDLRIGIPAVLG-GLLVVLRCVQVSQRTLYWDDLVIPAKFSP---LSFTGLFRLYD 56 Query 61 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVL-LIPLT 119 H+MPG+ LV + R APL W PA+ +V+L L + AL ++ +P++ LI L Sbjct 57 NHLMPGSALVQVLVARAAPLSWWLPALIIVLLTAASFLLWVCALRALAPDQPMMRLIGLA 116 Query 120 FALFTPLAVPGFAWWAAALNSLPMLAALAWVCADA-ILLVRTGNHRYAVTGVLVYLGGLL 178 F+P + WW+ A+N A AW CA A +L + H + +V L GL+ Sbjct 117 LLGFSPFLMDAAGWWSTAIN------AYAWQCACAGVLWLVLRKHPWF--AAIVLLVGLV 168 Query 179 FFEKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQ 238 F EK+ I V + + +R + ++ + + +T GW+A+YL +D Sbjct 169 FTEKSLTIMPVIVVLLLIIGKIRSHKLSIFLL-----------VVVTAGWLAVYLPRLDF 217 Query 239 RRWSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAV 298 + ++T+ L ++ I+P GGPW W+RW P +A P + ++ +VL + Sbjct 218 GLGGTTRTVTFGL-PTALFQAIIPGAFGGPWQWSRWIPGKAFADPSMPLSIIAVIVLFVL 276 Query 299 LALSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLA 358 + + +R+ + + + GY + +F R T+ L +++ Y+ D + L+ Sbjct 277 MFPAALRRPQRVLLLIPTLGYLITIWFFLFTARGGEETSETLLRSMHYYVDWWSMTVLVG 336 Query 359 AVALQAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQ 418 L+ N + V + V F+ SS+ ST T++A+W +P+ YL N + Sbjct 337 VAGLRLRN------------TTIIKVFTWV-FVASSMVSTGTWIAAWHTDPSREYLPNVR 383 Query 419 ASLAAAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGR 478 A+L A G +L+Q+ VL + P N S + + V TTQ R+F + G Sbjct 384 AAL--AREGDTILNQQTPLEVLTPLMHPYNWVSAIAGITPV-----NATTQPRVFDAHGL 436 Query 479 LVDAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDG-SMAL 537 L A++ V GP P+CGY V + ++ + G+W E N LA++DG + + Sbjct 437 LHPARIEPVSRSQLGPEPECGYRVYSGGSVDIPINPGVPFGEWVWEFNSLASTDGMKVTI 496 Query 538 ALSDGPE-------RKVPVHP--GLNRVYARLPGAGDA--ITVRANTTALSLCIGAAPVG 586 +G E R + V P L + R+PG G + V +CIGA +G Sbjct 497 TTPNGLEPIAATNSRAITVPPPTELGTKWVRVPGGGQILRVVVTGPDPQAHVCIGAGALG 556 Query 587 FLAP 590 L P Sbjct 557 PLVP 560 >gi|225020371|ref|ZP_03709563.1| hypothetical protein CORMATOL_00378 [Corynebacterium matruchotii ATCC 33806] gi|224946760|gb|EEG27969.1| hypothetical protein CORMATOL_00378 [Corynebacterium matruchotii ATCC 33806] Length=562 Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 166/604 (28%), Positives = 279/604 (47%), Gaps = 58/604 (9%) Query 1 MPAPRMPRVALVAVLLITVQLVVRVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHD 60 M PR R+ + AVL + +V+R V YWDDL++ + LS + LF +D Sbjct 1 MSFPRDLRIGIPAVLG-GLLVVLRCVQVSQRTLYWDDLVIPAKFSP---LSFTGLFRLYD 56 Query 61 GHVMPGAFLVAGAIIRVAPLVWTGPAISLVVLQLLESLALLRALYVISSWRPVL-LIPLT 119 H+MPG+ LV + R APL W PA+ +V+L L + AL ++ +P++ LI L Sbjct 57 NHLMPGSALVQVLVARAAPLSWWLPALIIVLLTAASFLLWVCALRALAPDQPMMRLIGLA 116 Query 120 FALFTPLAVPGFAWWAAALNSLPMLAALAWVCADA-ILLVRTGNHRYAVTGVLVYLGGLL 178 F+P + WW+ A+N A AW CA A +L + H + +V L GL+ Sbjct 117 LLGFSPFLMDAAGWWSTAIN------AYAWQCACAGVLWLVLRKHPWF--AAIVLLVGLV 168 Query 179 FFEKAAVIPFVSFAVAALQCHVRGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQ 238 F EK+ I V + + +R + ++ + + +T GW+A+YL ++ Sbjct 169 FTEKSLTIMPVIVVLLLIIGKIRSHKLSIFLL-----------MVVTAGWLAVYLPRINF 217 Query 239 RRWSSDLSMTWDLLCRSVTHGIVPALAGGPWDWARWAPASPWATPPAVVMVLGWLVLIAV 298 + ++T+ L ++ I+P GGPW W+RW P +A P + ++ +VL + Sbjct 218 GLGGTTRTVTFGL-PTALFQAIIPGAFGGPWQWSRWIPGKAFADPSMPLSIIAVIVLFVL 276 Query 299 LALSLVRKRRIGPVWLTAAGYAVACQVPIFLMRSSPFTALELAQTLRYFPDLVVVLALLA 358 + + +R+ + + + GY + +F R T+ L +++ Y+ D + L+ Sbjct 277 MFPAALRRPQRVLLLIPTLGYLITIWFFLFTARGGEETSETLLRSMHYYVDWWSMTVLVG 336 Query 359 AVALQAPNRAGTRWLDASPARAVATVASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQ 418 L+ N + V + V F+ SS+ ST T++A+W +P+ YL N + Sbjct 337 VAGLRLHN------------TTIIKVFTWV-FVASSMVSTGTWIAAWHTDPSREYLPNVR 383 Query 419 ASLAAAASGAPLLDQEVDPLVLQRVAWPENLASHMFALLRVRPEFATTTTQLRMFTSTGR 478 A+L A G +L+Q+ VL + P N S + + V TTQ R+F + G Sbjct 384 AAL--AREGDTILNQQTPLEVLTPLMHPYNWISAIAGITPVN-----ATTQPRVFDAHGL 436 Query 479 LVDAKVTWVRTIIAGPVPQCGYFVQPDRPERLILDGPLLPGDWTVELNYLANSDGSMA-- 536 L A++ V GP P+CGY V + ++ + G+W E N LA++DG Sbjct 437 LHPARIEPVSRSQLGPEPECGYRVYSGGTVDIPINPGVPFGEWVWEFNSLASTDGMKVTI 496 Query 537 --------LALSDGPERKVPVHPGLNRVYARLPGAGDA--ITVRANTTALSLCIGAAPVG 586 +A ++ VP L + R+PG G + V +CIGA +G Sbjct 497 TTPNGLEPIAATNSRAITVPAPTELGTKWVRVPGGGQILRVVVTGPDPQAHVCIGAGALG 556 Query 587 FLAP 590 L P Sbjct 557 PLVP 560 >gi|317509105|ref|ZP_07966734.1| hypothetical protein HMPREF9336_03106 [Segniliparus rugosus ATCC BAA-974] gi|316252634|gb|EFV12075.1| hypothetical protein HMPREF9336_03106 [Segniliparus rugosus ATCC BAA-974] Length=296 Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 118/264 (45%), Positives = 150/264 (57%), Gaps = 3/264 (1%) Query 24 RVVLAFGGYFYWDDLILVGRAGTGGLLSPSYLFDDHDGHVMPGAFLVAGAIIRVAPLVWT 83 R +A+ G FYWDDL+L GRAG S L HDGH MP AFL+AGA ++APL W Sbjct 21 RGAVAWRGGFYWDDLVLAGRAGASSPWSGDSLLRHHDGHFMPAAFLLAGATTKLAPLRWL 80 Query 84 GPAISLVVLQLLESLALLRALYVISSWRPVLLIPLTFALFTPLAVPGFAWWAAALNSLPM 143 + L+ LQ L SLA+LR L +I WRP++L+ + LFTPL +P FAWW+AALN+LP+ Sbjct 81 PAFLELLALQALASLAVLRLLRLILGWRPLVLVLFAWYLFTPLTLPSFAWWSAALNALPL 140 Query 144 LAALAWVCADAILLVR---TGNHRYAVTGVLVYLGGLLFFEKAAVIPFVSFAVAALQCHV 200 A LAW + ILLVR R+A +L + L FFEKA +IPF + AVAAL V Sbjct 141 HAGLAWAAGEMILLVRVRPKQRLRHAAGALLAFAAALSFFEKALLIPFFATAVAALSLRV 200 Query 201 RGDRSALATVWRAGVRLWTPSLALTVGWVALYLAVVDQRRWSSDLSMTWDLLCRSVTHGI 260 G RS L T R LW + W ALYL+ + + D L R+ G+ Sbjct 201 TGHRSPLRTTLRRSRALWLGYALVIAAWAALYLSAPLPKAGLPQPGIVLDALWRTNAQGL 260 Query 261 VPALAGGPWDWARWAPASPWATPP 284 VP+ GGP W R P + A PP Sbjct 261 VPSAFGGPLLWTRPQPIAALAHPP 284 >gi|317509107|ref|ZP_07966735.1| hypothetical protein HMPREF9336_03107 [Segniliparus rugosus ATCC BAA-974] gi|316252595|gb|EFV12037.1| hypothetical protein HMPREF9336_03107 [Segniliparus rugosus ATCC BAA-974] Length=255 Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 92/206 (45%), Positives = 127/206 (62%), Gaps = 2/206 (0%) Query 385 ASAVLFLTSSLYSTATFLASWRDNPTEGYLKNAQASLAAAASGAPLLDQEVDPLVLQRVA 444 ASAV+ +SL STA+F +W DNPT+ YL + LA+ S PLLDQ V VL + Sbjct 51 ASAVV-CCASLVSTASFAQAWSDNPTDDYLDTVRRELASDQS-TPLLDQAVPYNVLSWNS 108 Query 445 WPENLASHMFALLRVRPEFATTTTQLRMFTSTGRLVDAKVTWVRTIIAGPVPQCGYFVQP 504 +P+NL SH+FA +R RP FA++T LR G + ++ +VR I GPVP CGY V+P Sbjct 109 YPDNLMSHVFAPVRERPPFASSTPVLRFVDDRGHFLPGQLVYVRAIPQGPVPGCGYRVEP 168 Query 505 DRPERLILDGPLLPGDWTVELNYLANSDGSMALALSDGPERKVPVHPGLNRVYARLPGAG 564 L L GPLL +WT +LNY A++ G++A+ L G ++VPV GL+ V+ RL G G Sbjct 169 GEAAELPLSGPLLDWEWTAQLNYYASTGGTVAVQLPSGRAQRVPVAAGLHTVFVRLDGGG 228 Query 565 DAITVRANTTALSLCIGAAPVGFLAP 590 + +R + L LC+GA PVG + P Sbjct 229 ARLLLRPLSPGLWLCVGAGPVGAVWP 254 Lambda K H 0.325 0.138 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1343163911988 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40