BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3650

Length=94
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15843262|ref|NP_338299.1|  PE family protein [Mycobacterium tu...   177    6e-43
gi|289445244|ref|ZP_06434988.1|  PE family protein [Mycobacterium...   101    4e-20
gi|340628622|ref|YP_004747074.1|  PE-PGRS family protein [Mycobac...  95.9    2e-18
gi|118616393|ref|YP_904725.1|  PE-PGRS family protein [Mycobacter...  95.9    2e-18
gi|240169753|ref|ZP_04748412.1|  PE-PGRS family protein [Mycobact...  95.1    3e-18
gi|183980635|ref|YP_001848926.1|  PE-PGRS family protein [Mycobac...  84.7    4e-15
gi|344219640|gb|AEN00271.1|  PE-PGRS family protein [Mycobacteriu...  79.7    1e-13
gi|294996728|ref|ZP_06802419.1|  PE-PGRS family protein [Mycobact...  79.7    1e-13
gi|51832320|gb|AAU10330.1|  PE_PGRS 33 [Mycobacterium tuberculosis]   79.7    1e-13
gi|31793008|ref|NP_855501.1|  PE-PGRS family protein [Mycobacteri...  79.7    1e-13
gi|57116923|ref|YP_177846.1|  PE-PGRS family protein [Mycobacteri...  79.7    1e-13
gi|148823031|ref|YP_001287785.1|  PE-PGRS family protein [Mycobac...  79.7    1e-13
gi|15841288|ref|NP_336325.1|  PE_PGRS family protein [Mycobacteri...  79.7    1e-13
gi|289574498|ref|ZP_06454725.1|  PE-PGRS family protein [Mycobact...  79.7    1e-13
gi|289554408|ref|ZP_06443618.1|  predicted protein [Mycobacterium...  79.7    1e-13
gi|308231948|ref|ZP_07414373.2|  hypothetical protein TMAG_01994 ...  79.7    1e-13
gi|308375687|ref|ZP_07444766.2|  putative PE family protein [Myco...  79.3    1e-13
gi|308402622|ref|ZP_07493548.2|  putative PE family protein [Myco...  79.3    1e-13
gi|308376833|ref|ZP_07668363.1|  putative PE family protein [Myco...  79.3    2e-13
gi|308380195|ref|ZP_07489026.2|  putative PE family protein [Myco...  79.3    2e-13
gi|323719645|gb|EGB28767.1|  PE-PGRS family protein [Mycobacteriu...  79.3    2e-13
gi|289574496|ref|ZP_06454723.1|  PE-PGRS family protein [Mycobact...  79.3    2e-13
gi|313658700|ref|ZP_07815580.1|  PE-PGRS family protein [Mycobact...  79.3    2e-13
gi|297731366|ref|ZP_06960484.1|  PE-PGRS family protein [Mycobact...  79.3    2e-13
gi|167968090|ref|ZP_02550367.1|  PE-PGRS family protein [Mycobact...  79.3    2e-13
gi|289757922|ref|ZP_06517300.1|  PE family protein [Mycobacterium...  79.3    2e-13
gi|306793258|ref|ZP_07431560.1|  putative PE family protein [Myco...  79.3    2e-13
gi|308372061|ref|ZP_07427244.2|  putative PE family protein [Myco...  79.0    2e-13
gi|289745750|ref|ZP_06505128.1|  predicted protein [Mycobacterium...  79.0    2e-13
gi|289569891|ref|ZP_06450118.1|  predicted protein [Mycobacterium...  79.0    2e-13
gi|289750391|ref|ZP_06509769.1|  PE family protein [Mycobacterium...  79.0    2e-13
gi|306797636|ref|ZP_07435938.1|  putative PE family protein [Myco...  79.0    2e-13
gi|297634379|ref|ZP_06952159.1|  PE-PGRS family protein [Mycobact...  78.6    3e-13
gi|240173304|ref|ZP_04751962.1|  PE-PGRS family protein [Mycobact...  74.7    4e-12
gi|308376351|ref|ZP_07438538.2|  putative PE family protein [Myco...  73.2    1e-11
gi|240173032|ref|ZP_04751690.1|  PE-PGRS family protein [Mycobact...  72.4    2e-11
gi|340626769|ref|YP_004745221.1|  PE-PGRS family protein [Mycobac...  72.0    3e-11
gi|340628625|ref|YP_004747077.1|  PE-PGRS family protein [Mycobac...  71.2    5e-11
gi|118616391|ref|YP_904723.1|  PE_PGRS family protein [Mycobacter...  69.3    2e-10
gi|183981863|ref|YP_001850154.1|  PE-PGRS family protein [Mycobac...  67.8    4e-10
gi|183980634|ref|YP_001848925.1|  PE-PGRS family protein [Mycobac...  67.8    5e-10
gi|328456993|gb|AEB02416.1|  PE family protein [Mycobacterium tub...  65.9    2e-09
gi|289572862|ref|ZP_06453089.1|  PE-PGRS family protein [Mycobact...  65.5    2e-09
gi|340625316|ref|YP_004743768.1|  PE-PGRS family protein [Mycobac...  65.5    2e-09
gi|306966277|ref|ZP_07478938.1|  putative PE family protein [Myco...  65.5    3e-09
gi|148660044|ref|YP_001281567.1|  PE-PGRS family protein [Mycobac...  65.5    3e-09
gi|289445815|ref|ZP_06435559.1|  predicted protein [Mycobacterium...  65.5    3e-09
gi|148821476|ref|YP_001286230.1|  PE-PGRS family protein [Mycobac...  65.1    3e-09
gi|31791457|ref|NP_853950.1|  PE-PGRS family protein [Mycobacteri...  65.1    3e-09
gi|340625315|ref|YP_004743767.1|  PE-PGRS family protein [Mycobac...  65.1    3e-09


>gi|15843262|ref|NP_338299.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|31794820|ref|NP_857313.1| PE family protein [Mycobacterium bovis AF2122/97]
 gi|57117138|ref|YP_178000.1| PE family protein [Mycobacterium tuberculosis H37Rv]
 75 more sequence titles
 
gi|121639563|ref|YP_979787.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148663513|ref|YP_001285036.1| PE family protein [Mycobacterium tuberculosis H37Ra]
 gi|148824852|ref|YP_001289606.1| PE family protein [Mycobacterium tuberculosis F11]
 gi|167968571|ref|ZP_02550848.1| PE family protein [Mycobacterium tuberculosis H37Ra]
 gi|224992060|ref|YP_002646749.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800690|ref|YP_003033691.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|254233146|ref|ZP_04926472.1| PE family protein [Mycobacterium tuberculosis C]
 gi|254366200|ref|ZP_04982244.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
 gi|254552762|ref|ZP_05143209.1| PE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289441080|ref|ZP_06430824.1| PE family protein [Mycobacterium tuberculosis T46]
 gi|289555911|ref|ZP_06445121.1| PE family protein [Mycobacterium tuberculosis KZN 605]
 gi|289571887|ref|ZP_06452114.1| PE family protein [Mycobacterium tuberculosis T17]
 gi|289572297|ref|ZP_06452524.1| PE family protein [Mycobacterium tuberculosis K85]
 gi|289747486|ref|ZP_06506864.1| PE family protein [Mycobacterium tuberculosis 02_1987]
 gi|289748164|ref|ZP_06507542.1| PE family protein [Mycobacterium tuberculosis T92]
 gi|289755776|ref|ZP_06515154.1| PE family protein [Mycobacterium tuberculosis EAS054]
 gi|289759805|ref|ZP_06519183.1| PE family protein [Mycobacterium tuberculosis T85]
 gi|289763827|ref|ZP_06523205.1| PE family protein [Mycobacterium tuberculosis GM 1503]
 gi|294995439|ref|ZP_06801130.1| PE family protein [Mycobacterium tuberculosis 210]
 gi|297636325|ref|ZP_06954105.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
 gi|297733318|ref|ZP_06962436.1| PE family protein [Mycobacterium tuberculosis KZN R506]
 gi|298527124|ref|ZP_07014533.1| pe family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306778003|ref|ZP_07416340.1| PE family protein [Mycobacterium tuberculosis SUMu001]
 gi|306778536|ref|ZP_07416873.1| PE family protein [Mycobacterium tuberculosis SUMu002]
 gi|306786557|ref|ZP_07424879.1| PE family protein [Mycobacterium tuberculosis SUMu003]
 gi|306790923|ref|ZP_07429245.1| PE family protein [Mycobacterium tuberculosis SUMu004]
 gi|306791243|ref|ZP_07429545.1| PE family protein [Mycobacterium tuberculosis SUMu005]
 gi|306796030|ref|ZP_07434332.1| PE family protein [Mycobacterium tuberculosis SUMu006]
 gi|306801277|ref|ZP_07437945.1| PE family protein [Mycobacterium tuberculosis SUMu008]
 gi|306805491|ref|ZP_07442159.1| PE family protein [Mycobacterium tuberculosis SUMu007]
 gi|306969782|ref|ZP_07482443.1| PE family protein [Mycobacterium tuberculosis SUMu009]
 gi|306974121|ref|ZP_07486782.1| PE family protein [Mycobacterium tuberculosis SUMu010]
 gi|307081829|ref|ZP_07490999.1| PE family protein [Mycobacterium tuberculosis SUMu011]
 gi|307086443|ref|ZP_07495556.1| PE family protein [Mycobacterium tuberculosis SUMu012]
 gi|313660650|ref|ZP_07817530.1| PE family protein [Mycobacterium tuberculosis KZN V2475]
 gi|339633642|ref|YP_004725284.1| PE family protein [Mycobacterium africanum GM041182]
 gi|7478563|pir||C70564 probable PE protein - Mycobacterium tuberculosis (strain H37RV)
 gi|13883619|gb|AAK48113.1| PE family protein [Mycobacterium tuberculosis CDC1551]
 gi|31620417|emb|CAD95860.1| PE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
 gi|41352818|emb|CAE55625.1| PE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|121495211|emb|CAL73697.1| PE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124602939|gb|EAY61214.1| PE family protein [Mycobacterium tuberculosis C]
 gi|134151712|gb|EBA43757.1| PE family protein [Mycobacterium tuberculosis str. Haarlem]
 gi|148507665|gb|ABQ75474.1| PE family protein [Mycobacterium tuberculosis H37Ra]
 gi|148723379|gb|ABR08004.1| PE family protein [Mycobacterium tuberculosis F11]
 gi|224775175|dbj|BAH27981.1| PE family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253322193|gb|ACT26796.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289413999|gb|EFD11239.1| PE family protein [Mycobacterium tuberculosis T46]
 gi|289440543|gb|EFD23036.1| PE family protein [Mycobacterium tuberculosis KZN 605]
 gi|289536728|gb|EFD41306.1| PE family protein [Mycobacterium tuberculosis K85]
 gi|289545641|gb|EFD49289.1| PE family protein [Mycobacterium tuberculosis T17]
 gi|289688014|gb|EFD55502.1| PE family protein [Mycobacterium tuberculosis 02_1987]
 gi|289688751|gb|EFD56180.1| PE family protein [Mycobacterium tuberculosis T92]
 gi|289696363|gb|EFD63792.1| PE family protein [Mycobacterium tuberculosis EAS054]
 gi|289711333|gb|EFD75349.1| PE family protein [Mycobacterium tuberculosis GM 1503]
 gi|289715369|gb|EFD79381.1| PE family protein [Mycobacterium tuberculosis T85]
 gi|298496918|gb|EFI32212.1| pe family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308213714|gb|EFO73113.1| PE family protein [Mycobacterium tuberculosis SUMu001]
 gi|308328444|gb|EFP17295.1| PE family protein [Mycobacterium tuberculosis SUMu002]
 gi|308328879|gb|EFP17730.1| PE family protein [Mycobacterium tuberculosis SUMu003]
 gi|308332719|gb|EFP21570.1| PE family protein [Mycobacterium tuberculosis SUMu004]
 gi|308340212|gb|EFP29063.1| PE family protein [Mycobacterium tuberculosis SUMu005]
 gi|308343498|gb|EFP32349.1| PE family protein [Mycobacterium tuberculosis SUMu006]
 gi|308347998|gb|EFP36849.1| PE family protein [Mycobacterium tuberculosis SUMu007]
 gi|308351940|gb|EFP40791.1| PE family protein [Mycobacterium tuberculosis SUMu008]
 gi|308352700|gb|EFP41551.1| PE family protein [Mycobacterium tuberculosis SUMu009]
 gi|308356574|gb|EFP45425.1| PE family protein [Mycobacterium tuberculosis SUMu010]
 gi|308360532|gb|EFP49383.1| PE family protein [Mycobacterium tuberculosis SUMu011]
 gi|308364144|gb|EFP52995.1| PE family protein [Mycobacterium tuberculosis SUMu012]
 gi|323717699|gb|EGB26900.1| PE family protein [Mycobacterium tuberculosis CDC1551A]
 gi|326905485|gb|EGE52418.1| PE family protein [Mycobacterium tuberculosis W-148]
 gi|328460420|gb|AEB05843.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
 gi|339332998|emb|CCC28726.1| PE family protein [Mycobacterium africanum GM041182]
 gi|341603584|emb|CCC66265.1| PE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
 gi|344221485|gb|AEN02116.1| PE family protein [Mycobacterium tuberculosis CTRI-2]
Length=94

 Score =  177 bits (448),  Expect = 6e-43, Method: Compositional matrix adjust.
 Identities = 93/94 (99%), Positives = 94/94 (100%), Gaps = 0/94 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ
Sbjct  1   MSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60

Query  61  AYQAASAQAAAFHTRFIRARSRHPQQETTCRRVR  94
           AYQAASAQAAAFHTRFIRARSRHPQQETTCRRVR
Sbjct  61  AYQAASAQAAAFHTRFIRARSRHPQQETTCRRVR  94


>gi|289445244|ref|ZP_06434988.1| PE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289418202|gb|EFD15403.1| PE family protein [Mycobacterium tuberculosis CPHL_A]
Length=129

 Score =  101 bits (251),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 68/75 (91%), Positives = 71/75 (95%), Gaps = 1/75 (1%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHG+
Sbjct  1   MSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGR  60

Query  61  AYQAASAQAAAFHTR  75
             +  SAQAAAFHTR
Sbjct  61  PIR-RSAQAAAFHTR  74


>gi|340628622|ref|YP_004747074.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340006812|emb|CCC46001.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=157

 Score = 95.9 bits (237),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 73/78 (94%), Positives = 77/78 (99%), Gaps = 0/78 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFVIAAPEALDSAATDLV LGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ
Sbjct  1   MSFVIAAPEALDSAATDLVGLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60

Query  61  AYQAASAQAAAFHTRFIR  78
           AYQAASAQAAAFHT+F++
Sbjct  61  AYQAASAQAAAFHTQFVQ  78


>gi|118616393|ref|YP_904725.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
 gi|118568503|gb|ABL03254.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
Length=889

 Score = 95.9 bits (237),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 50/78 (65%), Positives = 62/78 (80%), Gaps = 0/78 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +S+V+A P+ L SAA D+  +GS++GAA  AA   TTG++AAA DEVS AIAALFS HGQ
Sbjct  1   MSYVVAIPDMLASAAADVAGIGSSVGAANTAAVGATTGVMAAADDEVSVAIAALFSGHGQ  60

Query  61  AYQAASAQAAAFHTRFIR  78
           AYQA SAQAAAFH +F+R
Sbjct  61  AYQAISAQAAAFHDQFLR  78


>gi|240169753|ref|ZP_04748412.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=148

 Score = 95.1 bits (235),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 52/78 (67%), Positives = 62/78 (80%), Gaps = 0/78 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +S +IA PE LDSAATDL  + STL AA  +AAA+TTGI+AAA DEVSAAIA LFS+H Q
Sbjct  1   MSTLIAVPEILDSAATDLASIASTLNAADVSAAARTTGILAAAEDEVSAAIAVLFSSHAQ  60

Query  61  AYQAASAQAAAFHTRFIR  78
            YQA SAQA AFH +F++
Sbjct  61  TYQAVSAQATAFHQQFLQ  78


>gi|183980635|ref|YP_001848926.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183173961|gb|ACC39071.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1061

 Score = 84.7 bits (208),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 50/78 (65%), Positives = 63/78 (81%), Gaps = 0/78 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +S+V+A P+ L SAA D+  +GS++GAA AAA   TTG++AAA DEVS AIAALFS HGQ
Sbjct  1   MSYVVAIPDMLASAAADVAGIGSSVGAANAAAVGATTGVMAAADDEVSVAIAALFSGHGQ  60

Query  61  AYQAASAQAAAFHTRFIR  78
           AY+A SAQAAAFH +F+R
Sbjct  61  AYRAISAQAAAFHDQFLR  78


>gi|344219640|gb|AEN00271.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=511

 Score = 79.7 bits (195),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 52/81 (65%), Positives = 63/81 (78%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  1   MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  60

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQA SAQAA FH +F+RA +
Sbjct  61  AYQALSAQAALFHEQFVRALT  81


>gi|294996728|ref|ZP_06802419.1| PE-PGRS family protein [Mycobacterium tuberculosis 210]
Length=501

 Score = 79.7 bits (195),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 52/81 (65%), Positives = 63/81 (78%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  1   MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  60

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQA SAQAA FH +F+RA +
Sbjct  61  AYQALSAQAALFHEQFVRALT  81


>gi|51832320|gb|AAU10330.1| PE_PGRS 33 [Mycobacterium tuberculosis]
Length=501

 Score = 79.7 bits (195),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 52/81 (65%), Positives = 63/81 (78%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  1   MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  60

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQA SAQAA FH +F+RA +
Sbjct  61  AYQALSAQAALFHEQFVRALT  81


>gi|31793008|ref|NP_855501.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|121637721|ref|YP_977944.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224990205|ref|YP_002644892.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 6 more sequence titles
 
gi|339631871|ref|YP_004723513.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|31618599|emb|CAD94552.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121493368|emb|CAL71840.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224773318|dbj|BAH26124.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|339331227|emb|CCC26910.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|341601748|emb|CCC64422.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=501

 Score = 79.7 bits (195),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 52/81 (65%), Positives = 63/81 (78%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  1   MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  60

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQA SAQAA FH +F+RA +
Sbjct  61  AYQALSAQAALFHEQFVRALT  81


>gi|57116923|ref|YP_177846.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 gi|148661624|ref|YP_001283147.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|2496543|sp|Q50615.1|PG33_MYCTU RecName: Full=Uncharacterized PE-PGRS family protein PE_PGRS33
 gi|38684072|emb|CAE55435.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148505776|gb|ABQ73585.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=498

 Score = 79.7 bits (195),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 52/81 (65%), Positives = 63/81 (78%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  1   MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  60

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQA SAQAA FH +F+RA +
Sbjct  61  AYQALSAQAALFHEQFVRALT  81


>gi|148823031|ref|YP_001287785.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|253799138|ref|YP_003032139.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|148721558|gb|ABR06183.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|253320641|gb|ACT25244.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|328458893|gb|AEB04316.1| hypothetical protein TBSG_02187 [Mycobacterium tuberculosis KZN 
4207]
Length=518

 Score = 79.7 bits (195),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 62/79 (79%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  21  MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  80

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQAA FH +F+RA
Sbjct  81  AYQALSAQAALFHEQFVRA  99


>gi|15841288|ref|NP_336325.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
 gi|13881517|gb|AAK46139.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=491

 Score = 79.7 bits (195),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 62/79 (79%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  21  MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  80

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQAA FH +F+RA
Sbjct  81  AYQALSAQAALFHEQFVRA  99


>gi|289574498|ref|ZP_06454725.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
 gi|289538929|gb|EFD43507.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
Length=293

 Score = 79.7 bits (195),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 62/79 (79%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  7   MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  66

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQAA FH +F+RA
Sbjct  67  AYQALSAQAALFHEQFVRA  85


>gi|289554408|ref|ZP_06443618.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|289439040|gb|EFD21533.1| predicted protein [Mycobacterium tuberculosis KZN 605]
Length=518

 Score = 79.7 bits (195),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 62/79 (79%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  21  MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  80

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQAA FH +F+RA
Sbjct  81  AYQALSAQAALFHEQFVRA  99


>gi|308231948|ref|ZP_07414373.2| hypothetical protein TMAG_01994 [Mycobacterium tuberculosis SUMu001]
 gi|308370831|ref|ZP_07422882.2| hypothetical protein TMCG_02856 [Mycobacterium tuberculosis SUMu003]
 gi|308377833|ref|ZP_07480573.2| putative PE family protein [Mycobacterium tuberculosis SUMu009]
 gi|308379041|ref|ZP_07484807.2| putative PE family protein [Mycobacterium tuberculosis SUMu010]
 gi|308215511|gb|EFO74910.1| hypothetical protein TMAG_01994 [Mycobacterium tuberculosis SUMu001]
 gi|308330684|gb|EFP19535.1| hypothetical protein TMCG_02856 [Mycobacterium tuberculosis SUMu003]
 gi|308354438|gb|EFP43289.1| putative PE family protein [Mycobacterium tuberculosis SUMu009]
 gi|308358369|gb|EFP47220.1| putative PE family protein [Mycobacterium tuberculosis SUMu010]
Length=194

 Score = 79.7 bits (195),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 62/79 (79%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  21  MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  80

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQAA FH +F+RA
Sbjct  81  AYQALSAQAALFHEQFVRA  99


>gi|308375687|ref|ZP_07444766.2| putative PE family protein [Mycobacterium tuberculosis SUMu007]
 gi|308345495|gb|EFP34346.1| putative PE family protein [Mycobacterium tuberculosis SUMu007]
Length=157

 Score = 79.3 bits (194),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 62/79 (79%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  21  MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  80

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQAA FH +F+RA
Sbjct  81  AYQALSAQAALFHEQFVRA  99


>gi|308402622|ref|ZP_07493548.2| putative PE family protein [Mycobacterium tuberculosis SUMu012]
 gi|308365946|gb|EFP54797.1| putative PE family protein [Mycobacterium tuberculosis SUMu012]
Length=153

 Score = 79.3 bits (194),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 62/79 (79%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  21  MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  80

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQAA FH +F+RA
Sbjct  81  AYQALSAQAALFHEQFVRA  99


>gi|308376833|ref|ZP_07668363.1| putative PE family protein [Mycobacterium tuberculosis SUMu008]
 gi|308349798|gb|EFP38649.1| putative PE family protein [Mycobacterium tuberculosis SUMu008]
Length=136

 Score = 79.3 bits (194),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 62/79 (79%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  21  MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  80

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQAA FH +F+RA
Sbjct  81  AYQALSAQAALFHEQFVRA  99


>gi|308380195|ref|ZP_07489026.2| putative PE family protein [Mycobacterium tuberculosis SUMu011]
 gi|308362293|gb|EFP51144.1| putative PE family protein [Mycobacterium tuberculosis SUMu011]
Length=146

 Score = 79.3 bits (194),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 62/79 (79%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  21  MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  80

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQAA FH +F+RA
Sbjct  81  AYQALSAQAALFHEQFVRA  99


>gi|323719645|gb|EGB28767.1| PE-PGRS family protein [Mycobacterium tuberculosis CDC1551A]
Length=171

 Score = 79.3 bits (194),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 62/79 (79%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  21  MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  80

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQAA FH +F+RA
Sbjct  81  AYQALSAQAALFHEQFVRA  99


>gi|289574496|ref|ZP_06454723.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
 gi|289538927|gb|EFD43505.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
Length=168

 Score = 79.3 bits (194),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 62/79 (79%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  21  MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  80

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQAA FH +F+RA
Sbjct  81  AYQALSAQAALFHEQFVRA  99


>gi|313658700|ref|ZP_07815580.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN V2475]
Length=198

 Score = 79.3 bits (194),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 52/81 (65%), Positives = 63/81 (78%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  1   MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  60

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQA SAQAA FH +F+RA +
Sbjct  61  AYQALSAQAALFHEQFVRALT  81


>gi|297731366|ref|ZP_06960484.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506]
Length=205

 Score = 79.3 bits (194),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 52/81 (65%), Positives = 63/81 (78%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  1   MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  60

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQA SAQAA FH +F+RA +
Sbjct  61  AYQALSAQAALFHEQFVRALT  81


>gi|167968090|ref|ZP_02550367.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=156

 Score = 79.3 bits (194),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 52/81 (65%), Positives = 63/81 (78%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  1   MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  60

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQA SAQAA FH +F+RA +
Sbjct  61  AYQALSAQAALFHEQFVRALT  81


>gi|289757922|ref|ZP_06517300.1| PE family protein [Mycobacterium tuberculosis T85]
 gi|308369532|ref|ZP_07418155.2| hypothetical protein TMBG_00350 [Mycobacterium tuberculosis SUMu002]
 gi|289713486|gb|EFD77498.1| PE family protein [Mycobacterium tuberculosis T85]
 gi|308327244|gb|EFP16095.1| hypothetical protein TMBG_00350 [Mycobacterium tuberculosis SUMu002]
Length=149

 Score = 79.3 bits (194),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 62/79 (79%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  21  MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  80

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQAA FH +F+RA
Sbjct  81  AYQALSAQAALFHEQFVRA  99


>gi|306793258|ref|ZP_07431560.1| putative PE family protein [Mycobacterium tuberculosis SUMu005]
 gi|308338306|gb|EFP27157.1| putative PE family protein [Mycobacterium tuberculosis SUMu005]
Length=173

 Score = 79.3 bits (194),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 62/79 (79%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  1   MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  60

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQAA FH +F+RA
Sbjct  61  AYQALSAQAALFHEQFVRA  79


>gi|308372061|ref|ZP_07427244.2| putative PE family protein [Mycobacterium tuberculosis SUMu004]
 gi|308334513|gb|EFP23364.1| putative PE family protein [Mycobacterium tuberculosis SUMu004]
Length=134

 Score = 79.0 bits (193),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 62/79 (79%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  21  MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  80

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQAA FH +F+RA
Sbjct  81  AYQALSAQAALFHEQFVRA  99


>gi|289745750|ref|ZP_06505128.1| predicted protein [Mycobacterium tuberculosis 02_1987]
 gi|289686278|gb|EFD53766.1| predicted protein [Mycobacterium tuberculosis 02_1987]
Length=219

 Score = 79.0 bits (193),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 62/79 (79%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  21  MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  80

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQAA FH +F+RA
Sbjct  81  AYQALSAQAALFHEQFVRA  99


>gi|289569891|ref|ZP_06450118.1| predicted protein [Mycobacterium tuberculosis T17]
 gi|289543645|gb|EFD47293.1| predicted protein [Mycobacterium tuberculosis T17]
Length=157

 Score = 79.0 bits (193),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 62/79 (79%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  21  MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  80

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQAA FH +F+RA
Sbjct  81  AYQALSAQAALFHEQFVRA  99


>gi|289750391|ref|ZP_06509769.1| PE family protein [Mycobacterium tuberculosis T92]
 gi|289690978|gb|EFD58407.1| PE family protein [Mycobacterium tuberculosis T92]
Length=116

 Score = 79.0 bits (193),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 52/81 (65%), Positives = 63/81 (78%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  1   MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  60

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQA SAQAA FH +F+RA +
Sbjct  61  AYQALSAQAALFHEQFVRALT  81


>gi|306797636|ref|ZP_07435938.1| putative PE family protein [Mycobacterium tuberculosis SUMu006]
 gi|308342013|gb|EFP30864.1| putative PE family protein [Mycobacterium tuberculosis SUMu006]
Length=161

 Score = 79.0 bits (193),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 52/81 (65%), Positives = 63/81 (78%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  1   MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  60

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQA SAQAA FH +F+RA +
Sbjct  61  AYQALSAQAALFHEQFVRALT  81


>gi|297634379|ref|ZP_06952159.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=354

 Score = 78.6 bits (192),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 52/81 (65%), Positives = 63/81 (78%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV+  PEAL + ATDL  +GST+G A AAAA  TT ++AAA DEVSAA+AALFS H Q
Sbjct  1   MSFVVTIPEALAAVATDLAGIGSTIGTANAAAAVPTTTVLAAAADEVSAAMAALFSGHAQ  60

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQA SAQAA FH +F+RA +
Sbjct  61  AYQALSAQAALFHEQFVRALT  81


>gi|240173304|ref|ZP_04751962.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=166

 Score = 74.7 bits (182),  Expect = 4e-12, Method: Compositional matrix adjust.
 Identities = 55/81 (68%), Positives = 65/81 (81%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFV AAPEAL +AA DL  +GST+GAA AAAAA TT ++AA  DEVSAAIAALF AHGQ
Sbjct  1   MSFVFAAPEALVAAAGDLATIGSTVGAANAAAAANTTSLLAAGADEVSAAIAALFGAHGQ  60

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQ  S QAAAFH +F++A +
Sbjct  61  AYQVLSGQAAAFHQQFVQALT  81


>gi|308376351|ref|ZP_07438538.2| putative PE family protein [Mycobacterium tuberculosis SUMu008]
 gi|308351362|gb|EFP40213.1| putative PE family protein [Mycobacterium tuberculosis SUMu008]
Length=172

 Score = 73.2 bits (178),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 53/79 (68%), Positives = 64/79 (82%), Gaps = 0/79 (0%)

Query  1    VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
            +SFVIAAPE + +AATDL  L S++ AA AAAAA TTG++AA  DEVS A+AALF AHGQ
Sbjct  36   MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTGLLAAGADEVSTAVAALFGAHGQ  95

Query  61   AYQAASAQAAAFHTRFIRA  79
            AYQA SAQA AFH +F++A
Sbjct  96   AYQALSAQAQAFHAQFVQA  114


>gi|240173032|ref|ZP_04751690.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=229

 Score = 72.4 bits (176),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 52/79 (66%), Positives = 64/79 (82%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFVIAAP+ + +AA+DL  +GST+GAATAAAA  TT ++AAA DEVSAAIAA F AH Q
Sbjct  1   MSFVIAAPDTVAAAASDLATIGSTIGAATAAAATPTTNLLAAAEDEVSAAIAAFFGAHAQ  60

Query  61  AYQAASAQAAAFHTRFIRA  79
           +YQ  SAQA AFH +F+RA
Sbjct  61  SYQTLSAQAQAFHQQFVRA  79


>gi|340626769|ref|YP_004745221.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340004959|emb|CCC44107.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=914

 Score = 72.0 bits (175),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 54/81 (67%), Positives = 66/81 (82%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFVIA PE + +AATDL  LGST+  A AAAAA TT ++AA  DE+SAAIAALF AHG+
Sbjct  1   MSFVIAVPETIAAAATDLANLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  60

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQAASA+AAAFH RF++A +
Sbjct  61  AYQAASAEAAAFHGRFVQALT  81


>gi|340628625|ref|YP_004747077.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340006815|emb|CCC46004.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=901

 Score = 71.2 bits (173),  Expect = 5e-11, Method: Compositional matrix adjust.
 Identities = 55/78 (71%), Positives = 64/78 (83%), Gaps = 0/78 (0%)

Query  1    VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
            +S+VIAAPEAL +AATDL  LGST+GAA AAAA  TT ++AA  DEVSAAIAALF  HGQ
Sbjct  101  MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLAAGADEVSAAIAALFGMHGQ  160

Query  61   AYQAASAQAAAFHTRFIR  78
             YQA SA+AAAFH RF++
Sbjct  161  TYQALSARAAAFHERFVQ  178


>gi|118616391|ref|YP_904723.1| PE_PGRS family protein [Mycobacterium ulcerans Agy99]
 gi|118568501|gb|ABL03252.1| PE_PGRS family protein [Mycobacterium ulcerans Agy99]
Length=348

 Score = 69.3 bits (168),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 54/81 (67%), Positives = 65/81 (81%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFVI APEAL +AATDL  LGST+GAA AAA A TT ++AA  DEVSAA+AA+F A GQ
Sbjct  1   MSFVITAPEALTAAATDLASLGSTIGAANAAAVAPTTAVLAAGADEVSAAVAAMFDAQGQ  60

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQ  SA+AAAFH +F++A S
Sbjct  61  AYQLLSARAAAFHEQFLQALS  81


>gi|183981863|ref|YP_001850154.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183175189|gb|ACC40299.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=859

 Score = 67.8 bits (164),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 55/81 (68%), Positives = 65/81 (81%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFVIA P+ + SAATDL  +GSTL AA AAAA  TT I+AAA DE+S AIAALFS H Q
Sbjct  1   MSFVIAVPDFIGSAATDLTGIGSTLSAANAAAAIPTTEILAAAEDEISTAIAALFSGHAQ  60

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQAASAQAAAF +RF++A +
Sbjct  61  AYQAASAQAAAFGSRFVQALT  81


>gi|183980634|ref|YP_001848925.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183173960|gb|ACC39070.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=476

 Score = 67.8 bits (164),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 53/79 (68%), Positives = 63/79 (80%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFVI APEAL +AATDL  LGST+GAA AAA A TT ++AA  DEVSAA+AALF A GQ
Sbjct  1   MSFVITAPEALTAAATDLASLGSTIGAANAAAVAPTTAVLAAGADEVSAAVAALFDAQGQ  60

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQ  SA+AA FH +F++A
Sbjct  61  AYQLLSARAATFHEQFLQA  79


>gi|328456993|gb|AEB02416.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
Length=779

 Score = 65.9 bits (159),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 54/79 (69%), Positives = 64/79 (82%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFVIAAPE + +AATDL  LGS++ AA AAAAA TT ++AA  DEVS AIAALF AHGQ
Sbjct  8   MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ  67

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQA AFH +F++A
Sbjct  68  AYQALSAQAQAFHAQFVQA  86


>gi|289572862|ref|ZP_06453089.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
 gi|289537293|gb|EFD41871.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
Length=233

 Score = 65.5 bits (158),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 54/79 (69%), Positives = 64/79 (82%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFVIAAPE + +AATDL  LGS++ AA AAAAA TT ++AA  DEVS AIAALF AHGQ
Sbjct  1   MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ  60

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQA AFH +F++A
Sbjct  61  AYQALSAQAQAFHAQFVQA  79


>gi|340625316|ref|YP_004743768.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340003506|emb|CCC42627.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=836

 Score = 65.5 bits (158),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 54/81 (67%), Positives = 65/81 (81%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFVIAAPE + +AATDL  LGS++ AA AAAAA TT ++AA  DEVS AIAALF AHGQ
Sbjct  1   MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALLAAGADEVSTAIAALFGAHGQ  60

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQA SAQA AFH +F++A +
Sbjct  61  AYQALSAQAQAFHAQFVQALT  81


>gi|306966277|ref|ZP_07478938.1| putative PE family protein [Mycobacterium tuberculosis SUMu009]
 gi|308355995|gb|EFP44846.1| putative PE family protein [Mycobacterium tuberculosis SUMu009]
Length=136

 Score = 65.5 bits (158),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 54/79 (69%), Positives = 64/79 (82%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFVIAAPE + +AATDL  LGS++ AA AAAAA TT ++AA  DEVS AIAALF AHGQ
Sbjct  1   MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ  60

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQA AFH +F++A
Sbjct  61  AYQALSAQAQAFHAQFVQA  79


>gi|148660044|ref|YP_001281567.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|148504196|gb|ABQ72005.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=957

 Score = 65.5 bits (158),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 54/81 (67%), Positives = 65/81 (81%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFVIAAPE + +AATDL  LGS++ AA AAAAA TT ++AA  DEVS AIAALF AHGQ
Sbjct  1   MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ  60

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQA SAQA AFH +F++A +
Sbjct  61  AYQALSAQAQAFHAQFVQALT  81


>gi|289445815|ref|ZP_06435559.1| predicted protein [Mycobacterium tuberculosis CPHL_A]
 gi|289418773|gb|EFD15974.1| predicted protein [Mycobacterium tuberculosis CPHL_A]
Length=132

 Score = 65.5 bits (158),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 54/79 (69%), Positives = 64/79 (82%), Gaps = 0/79 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFVIAAPE + +AATDL  LGS++ AA AAAAA TT ++AA  DEVS AIAALF AHGQ
Sbjct  8   MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ  67

Query  61  AYQAASAQAAAFHTRFIRA  79
           AYQA SAQA AFH +F++A
Sbjct  68  AYQALSAQAQAFHAQFVQA  86


>gi|148821476|ref|YP_001286230.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|148720003|gb|ABR04628.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|344218099|gb|AEM98729.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=906

 Score = 65.1 bits (157),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 54/81 (67%), Positives = 65/81 (81%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFVIAAPE + +AATDL  LGS++ AA AAAAA TT ++AA  DEVS AIAALF AHGQ
Sbjct  8   MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ  67

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQA SAQA AFH +F++A +
Sbjct  68  AYQALSAQAQAFHAQFVQALT  88


>gi|31791457|ref|NP_853950.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|31617042|emb|CAD93150.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=877

 Score = 65.1 bits (157),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 54/81 (67%), Positives = 65/81 (81%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFVIAAPE + +AATDL  LGS++ AA AAAAA TT ++AA  DEVS AIAALF AHGQ
Sbjct  1   MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ  60

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQA SAQA AFH +F++A +
Sbjct  61  AYQALSAQAQAFHAQFVQALT  81


>gi|340625315|ref|YP_004743767.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340003505|emb|CCC42626.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=899

 Score = 65.1 bits (157),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 54/81 (67%), Positives = 65/81 (81%), Gaps = 0/81 (0%)

Query  1   VSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGQ  60
           +SFVIAAPE + +AATDL  LGS++ AA AAAAA TT ++AA  DEVS AIAALF AHGQ
Sbjct  1   MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALLAAGADEVSTAIAALFGAHGQ  60

Query  61  AYQAASAQAAAFHTRFIRARS  81
           AYQA SAQA AFH +F++A +
Sbjct  61  AYQALSAQAQAFHAQFVQALT  81



Lambda     K      H
   0.319    0.122    0.328 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 127354591080


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40