BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3652

Length=104
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|31794822|ref|NP_857315.1|  PE-PGRS family-related protein [Myc...   199    1e-49
gi|289441082|ref|ZP_06430826.1|  PE-PGRS family protein [Mycobact...   198    3e-49
gi|7476155|pir||E70787  hypothetical glycine-rich protein Rv3652 ...  97.8    4e-19
gi|340628625|ref|YP_004747077.1|  PE-PGRS family protein [Mycobac...  97.4    6e-19
gi|340626342|ref|YP_004744794.1|  PE-PGRS family protein [Mycobac...  65.5    2e-09
gi|339297946|gb|AEJ50056.1|  PE-PGRS family protein [Mycobacteriu...  65.5    2e-09
gi|224989730|ref|YP_002644417.1|  PE-PGRS family protein [Mycobac...  65.5    2e-09
gi|31792521|ref|NP_855014.1|  PE-PGRS family protein [Mycobacteri...  65.5    2e-09
gi|57116848|ref|YP_177799.1|  PE-PGRS family protein [Mycobacteri...  65.5    2e-09
gi|339294307|gb|AEJ46418.1|  PE-PGRS family protein [Mycobacteriu...  65.5    3e-09
gi|289569337|ref|ZP_06449564.1|  PE-PGRS family protein [Mycobact...  65.1    3e-09
gi|298524832|ref|ZP_07012241.1|  LOW QUALITY PROTEIN: PE-PGRS fam...  65.1    3e-09
gi|289757430|ref|ZP_06516808.1|  PE-PGRS family protein [Mycobact...  65.1    3e-09
gi|289753407|ref|ZP_06512785.1|  predicted protein [Mycobacterium...  65.1    3e-09
gi|323720142|gb|EGB29245.1|  PE-PGRS family protein [Mycobacteriu...  65.1    4e-09
gi|289745077|ref|ZP_06504455.1|  PE-PGRS family protein [Mycobact...  64.7    4e-09
gi|306971612|ref|ZP_07484273.1|  putative PE family protein [Myco...  64.7    4e-09
gi|313658199|ref|ZP_07815079.1|  PE-PGRS family protein [Mycobact...  64.7    4e-09
gi|297730866|ref|ZP_06959984.1|  PE-PGRS family protein [Mycobact...  64.7    4e-09
gi|308369768|ref|ZP_07418992.2|  LOW QUALITY PROTEIN: hypothetica...  64.7    4e-09
gi|306967419|ref|ZP_07480080.1|  putative PE family protein [Myco...  64.7    4e-09
gi|306792745|ref|ZP_07431047.1|  putative PE family protein [Myco...  64.7    4e-09
gi|297633878|ref|ZP_06951658.1|  PE-PGRS family protein [Mycobact...  64.7    5e-09
gi|289442767|ref|ZP_06432511.1|  PE-PGRS domain-containing protei...  64.3    5e-09
gi|307083890|ref|ZP_07493003.1|  hypothetical protein TMLG_03417 ...  64.3    5e-09
gi|254231580|ref|ZP_04924907.1|  PE-PGRS family protein [Mycobact...  64.3    5e-09
gi|254550337|ref|ZP_05140784.1|  PE-PGRS family protein [Mycobact...  64.3    6e-09
gi|289573991|ref|ZP_06454218.1|  predicted protein [Mycobacterium...  63.9    7e-09
gi|294994883|ref|ZP_06800574.1|  PE-PGRS family protein [Mycobact...  63.2    1e-08
gi|340626769|ref|YP_004745221.1|  PE-PGRS family protein [Mycobac...  63.2    1e-08
gi|289445244|ref|ZP_06434988.1|  PE family protein [Mycobacterium...  62.0    3e-08
gi|183984963|ref|YP_001853254.1|  PE-PGRS family protein [Mycobac...  60.1    1e-07
gi|240172321|ref|ZP_04750980.1|  hypothetical protein MkanA1_2360...  55.1    4e-06
gi|253798842|ref|YP_003031843.1|  PE family protein [Mycobacteriu...  53.5    1e-05
gi|308232033|ref|ZP_07663977.1|  putative PE family protein [Myco...  52.8    2e-05
gi|289753155|ref|ZP_06512533.1|  predicted protein [Mycobacterium...  52.0    3e-05
gi|240173304|ref|ZP_04751962.1|  PE-PGRS family protein [Mycobact...  48.9    2e-04
gi|57116905|ref|YP_177831.1|  PE-PGRS family protein [Mycobacteri...  47.4    8e-04
gi|148661564|ref|YP_001283087.1|  PE-PGRS family protein [Mycobac...  45.4    0.003
gi|289443224|ref|ZP_06432968.1|  PE-PGRS family protein [Mycobact...  45.1    0.004
gi|308372848|ref|ZP_07430125.2|  putative PE family protein [Myco...  44.7    0.004
gi|307079787|ref|ZP_07488957.1|  putative PE family protein [Myco...  44.7    0.004
gi|306972079|ref|ZP_07484740.1|  putative PE family protein [Myco...  44.7    0.004
gi|289554468|ref|ZP_06443678.1|  predicted protein [Mycobacterium...  44.7    0.004
gi|307084363|ref|ZP_07493476.1|  putative PE family protein [Myco...  44.7    0.004
gi|289750321|ref|ZP_06509699.1|  PE-PGRS family protein [Mycobact...  44.7    0.004
gi|297731304|ref|ZP_06960422.1|  PE-PGRS family protein [Mycobact...  44.7    0.004
gi|313658636|ref|ZP_07815516.1|  PE-PGRS family protein [Mycobact...  44.7    0.005
gi|253799200|ref|YP_003032201.1|  PE-PGRS family protein [Mycobac...  44.7    0.005
gi|297634316|ref|ZP_06952096.1|  PE-PGRS family protein [Mycobact...  44.7    0.005


>gi|31794822|ref|NP_857315.1| PE-PGRS family-related protein [Mycobacterium bovis AF2122/97]
 gi|57117139|ref|YP_178001.1| PE-PGRS family-related protein [Mycobacterium tuberculosis H37Rv]
 gi|121639565|ref|YP_979789.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 19 more sequence titles
 
gi|224992062|ref|YP_002646751.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|289445246|ref|ZP_06434990.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289572299|ref|ZP_06452526.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
 gi|289759808|ref|ZP_06519186.1| PE-PGRS family protein [Mycobacterium tuberculosis T85]
 gi|298527126|ref|ZP_07014535.1| PE-PGRS family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308378396|ref|ZP_07668738.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu009]
 gi|339633644|ref|YP_004725286.1| PE-PGRS family-related protein [Mycobacterium africanum GM041182]
 gi|31620419|emb|CAD95862.1| PE-PGRS FAMILY-RELATED PROTEIN [Mycobacterium bovis AF2122/97]
 gi|41352819|emb|CAE55626.1| PE-PGRS FAMILY-RELATED PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|121495213|emb|CAL73699.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224775177|dbj|BAH27983.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|289418204|gb|EFD15405.1| PE-PGRS family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289536730|gb|EFD41308.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
 gi|289715372|gb|EFD79384.1| PE-PGRS family protein [Mycobacterium tuberculosis T85]
 gi|298496920|gb|EFI32214.1| PE-PGRS family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308352703|gb|EFP41554.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu009]
 gi|326905488|gb|EGE52421.1| PE-PGRS family protein [Mycobacterium tuberculosis W-148]
 gi|339333000|emb|CCC28728.1| PE-PGRS family-related protein [Mycobacterium africanum GM041182]
 gi|341603586|emb|CCC66267.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=104

 Score =  199 bits (506),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 104/104 (100%), Positives = 104/104 (100%), Gaps = 0/104 (0%)

Query  1    MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR  60
            MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR
Sbjct  1    MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR  60

Query  61   PIRHSVRGRRRSMSGSCRPWPQVGAPMRPPRPPASRRCRARSIC  104
            PIRHSVRGRRRSMSGSCRPWPQVGAPMRPPRPPASRRCRARSIC
Sbjct  61   PIRHSVRGRRRSMSGSCRPWPQVGAPMRPPRPPASRRCRARSIC  104


>gi|289441082|ref|ZP_06430826.1| PE-PGRS family protein [Mycobacterium tuberculosis T46]
 gi|289748166|ref|ZP_06507544.1| PE-PGRS family protein [Mycobacterium tuberculosis T92]
 gi|289414001|gb|EFD11241.1| PE-PGRS family protein [Mycobacterium tuberculosis T46]
 gi|289688753|gb|EFD56182.1| PE-PGRS family protein [Mycobacterium tuberculosis T92]
Length=104

 Score =  198 bits (503),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 103/104 (99%), Positives = 103/104 (99%), Gaps = 0/104 (0%)

Query  1    MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR  60
            MSYVIAAPEALVAAATDLATLGSTIGAAN AAAGSTTALLTAGADEVSAAIAAYSECTAR
Sbjct  1    MSYVIAAPEALVAAATDLATLGSTIGAANTAAAGSTTALLTAGADEVSAAIAAYSECTAR  60

Query  61   PIRHSVRGRRRSMSGSCRPWPQVGAPMRPPRPPASRRCRARSIC  104
            PIRHSVRGRRRSMSGSCRPWPQVGAPMRPPRPPASRRCRARSIC
Sbjct  61   PIRHSVRGRRRSMSGSCRPWPQVGAPMRPPRPPASRRCRARSIC  104


>gi|7476155|pir||E70787 hypothetical glycine-rich protein Rv3652 - Mycobacterium tuberculosis 
(strain H37RV)
Length=54

 Score = 97.8 bits (242),  Expect = 4e-19, Method: Compositional matrix adjust.
 Identities = 54/54 (100%), Positives = 54/54 (100%), Gaps = 0/54 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAY  54
           MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAY
Sbjct  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAY  54


>gi|340628625|ref|YP_004747077.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340006815|emb|CCC46004.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=901

 Score = 97.4 bits (241),  Expect = 6e-19, Method: Compositional matrix adjust.
 Identities = 52/53 (99%), Positives = 52/53 (99%), Gaps = 0/53 (0%)

Query  1    MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
            MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALL AGADEVSAAIAA
Sbjct  101  MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLAAGADEVSAAIAA  153


>gi|340626342|ref|YP_004744794.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340004532|emb|CCC43675.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=606

 Score = 65.5 bits (158),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|339297946|gb|AEJ50056.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180]
Length=591

 Score = 65.5 bits (158),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|224989730|ref|YP_002644417.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|224772843|dbj|BAH25649.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length=600

 Score = 65.5 bits (158),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|31792521|ref|NP_855014.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
 gi|121637256|ref|YP_977479.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|31618110|emb|CAD94221.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121492903|emb|CAL71374.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|341601274|emb|CCC63947.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=603

 Score = 65.5 bits (158),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|57116848|ref|YP_177799.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 gi|148661114|ref|YP_001282637.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|148822548|ref|YP_001287302.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 12 more sequence titles
 
gi|253799627|ref|YP_003032628.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289554883|ref|ZP_06444093.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|339631394|ref|YP_004723036.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|1722976|sp|Q10637.1|PG24_MYCTU RecName: Full=Uncharacterized PE-PGRS family protein PE_PGRS24; 
Flags: Precursor
 gi|38490254|emb|CAE55377.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|148505266|gb|ABQ73075.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|148721075|gb|ABR05700.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
 gi|253321130|gb|ACT25733.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289439515|gb|EFD22008.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|328459373|gb|AEB04796.1| hypothetical protein TBSG_02667 [Mycobacterium tuberculosis KZN 
4207]
 gi|339330750|emb|CCC26421.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
 gi|344219156|gb|AEM99786.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=603

 Score = 65.5 bits (158),  Expect = 2e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|339294307|gb|AEJ46418.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079]
Length=603

 Score = 65.5 bits (158),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|289569337|ref|ZP_06449564.1| PE-PGRS family protein [Mycobacterium tuberculosis T17]
 gi|289543091|gb|EFD46739.1| PE-PGRS family protein [Mycobacterium tuberculosis T17]
Length=487

 Score = 65.1 bits (157),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|298524832|ref|ZP_07012241.1| LOW QUALITY PROTEIN: PE-PGRS family protein [Mycobacterium tuberculosis 
94_M4241A]
 gi|298494626|gb|EFI29920.1| LOW QUALITY PROTEIN: PE-PGRS family protein [Mycobacterium tuberculosis 
94_M4241A]
Length=145

 Score = 65.1 bits (157),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|289757430|ref|ZP_06516808.1| PE-PGRS family protein [Mycobacterium tuberculosis T85]
 gi|289712994|gb|EFD77006.1| PE-PGRS family protein [Mycobacterium tuberculosis T85]
Length=249

 Score = 65.1 bits (157),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|289753407|ref|ZP_06512785.1| predicted protein [Mycobacterium tuberculosis EAS054]
 gi|289693994|gb|EFD61423.1| predicted protein [Mycobacterium tuberculosis EAS054]
Length=193

 Score = 65.1 bits (157),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|323720142|gb|EGB29245.1| PE-PGRS family protein [Mycobacterium tuberculosis CDC1551A]
Length=141

 Score = 65.1 bits (157),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|289745077|ref|ZP_06504455.1| PE-PGRS family protein [Mycobacterium tuberculosis 02_1987]
 gi|289685605|gb|EFD53093.1| PE-PGRS family protein [Mycobacterium tuberculosis 02_1987]
Length=99

 Score = 64.7 bits (156),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 41/52 (79%), Positives = 45/52 (87%), Gaps = 0/52 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIA  52
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIA  52


>gi|306971612|ref|ZP_07484273.1| putative PE family protein [Mycobacterium tuberculosis SUMu010]
 gi|308358839|gb|EFP47690.1| putative PE family protein [Mycobacterium tuberculosis SUMu010]
Length=165

 Score = 64.7 bits (156),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|313658199|ref|ZP_07815079.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN V2475]
Length=150

 Score = 64.7 bits (156),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|297730866|ref|ZP_06959984.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506]
Length=156

 Score = 64.7 bits (156),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|308369768|ref|ZP_07418992.2| LOW QUALITY PROTEIN: hypothetical protein TMBG_01156 [Mycobacterium 
tuberculosis SUMu002]
 gi|308326484|gb|EFP15335.1| LOW QUALITY PROTEIN: hypothetical protein TMBG_01156 [Mycobacterium 
tuberculosis SUMu002]
Length=146

 Score = 64.7 bits (156),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|306967419|ref|ZP_07480080.1| putative PE family protein [Mycobacterium tuberculosis SUMu009]
 gi|308354895|gb|EFP43746.1| putative PE family protein [Mycobacterium tuberculosis SUMu009]
Length=142

 Score = 64.7 bits (156),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|306792745|ref|ZP_07431047.1| putative PE family protein [Mycobacterium tuberculosis SUMu005]
 gi|308338771|gb|EFP27622.1| putative PE family protein [Mycobacterium tuberculosis SUMu005]
Length=143

 Score = 64.7 bits (156),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|297633878|ref|ZP_06951658.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=168

 Score = 64.7 bits (156),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|289442767|ref|ZP_06432511.1| PE-PGRS domain-containing protein [Mycobacterium tuberculosis 
T46]
 gi|289415686|gb|EFD12926.1| PE-PGRS domain-containing protein [Mycobacterium tuberculosis 
T46]
Length=173

 Score = 64.3 bits (155),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|307083890|ref|ZP_07493003.1| hypothetical protein TMLG_03417 [Mycobacterium tuberculosis SUMu012]
 gi|308366424|gb|EFP55275.1| hypothetical protein TMLG_03417 [Mycobacterium tuberculosis SUMu012]
Length=316

 Score = 64.3 bits (155),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|254231580|ref|ZP_04924907.1| PE-PGRS family protein [Mycobacterium tuberculosis C]
 gi|124600639|gb|EAY59649.1| PE-PGRS family protein [Mycobacterium tuberculosis C]
Length=92

 Score = 64.3 bits (155),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 41/54 (76%), Positives = 46/54 (86%), Gaps = 0/54 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAY  54
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+ 
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASL  54


>gi|254550337|ref|ZP_05140784.1| PE-PGRS family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=261

 Score = 64.3 bits (155),  Expect = 6e-09, Method: Compositional matrix adjust.
 Identities = 41/54 (76%), Positives = 46/54 (86%), Gaps = 0/54 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAY  54
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+ 
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASL  54


>gi|289573991|ref|ZP_06454218.1| predicted protein [Mycobacterium tuberculosis K85]
 gi|289538422|gb|EFD43000.1| predicted protein [Mycobacterium tuberculosis K85]
Length=261

 Score = 63.9 bits (154),  Expect = 7e-09, Method: Compositional matrix adjust.
 Identities = 41/54 (76%), Positives = 46/54 (86%), Gaps = 0/54 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAY  54
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+ 
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIASL  54


>gi|294994883|ref|ZP_06800574.1| PE-PGRS family protein [Mycobacterium tuberculosis 210]
Length=493

 Score = 63.2 bits (152),  Expect = 1e-08, Method: Composition-based stats.
 Identities = 41/53 (78%), Positives = 46/53 (87%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIAAPE LV AA+DLA +GST+GAANAAA G TT LL AGADEVSAAIA+
Sbjct  1   MSFVIAAPETLVRAASDLANIGSTLGAANAAALGPTTELLAAGADEVSAAIAS  53


>gi|340626769|ref|YP_004745221.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
 gi|340004959|emb|CCC44107.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=914

 Score = 63.2 bits (152),  Expect = 1e-08, Method: Composition-based stats.
 Identities = 40/53 (76%), Positives = 45/53 (85%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIA PE + AAATDLA LGSTI  ANAAAA +TT+LL AGADE+SAAIAA
Sbjct  1   MSFVIAVPETIAAAATDLANLGSTIAGANAAAAANTTSLLAAGADEISAAIAA  53


>gi|289445244|ref|ZP_06434988.1| PE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289418202|gb|EFD15403.1| PE family protein [Mycobacterium tuberculosis CPHL_A]
Length=129

 Score = 62.0 bits (149),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 43/67 (65%), Positives = 49/67 (74%), Gaps = 0/67 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR  60
           MS+VIAAPEAL +AATDL  LGST+GAA AAAA  TT ++ A  DEVSAAIAA      R
Sbjct  1   MSFVIAAPEALDSAATDLVVLGSTLGAATAAAAAQTTGIVAAAHDEVSAAIAALFSAHGR  60

Query  61  PIRHSVR  67
           PIR S +
Sbjct  61  PIRRSAQ  67


>gi|183984963|ref|YP_001853254.1| PE-PGRS family protein [Mycobacterium marinum M]
 gi|183178289|gb|ACC43399.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1408

 Score = 60.1 bits (144),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 39/54 (73%), Positives = 46/54 (86%), Gaps = 0/54 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAY  54
           MSY+I APEA+ AAA DLA +GS++ AANAAAAG TTA+LTA ADEVS AIAA+
Sbjct  1   MSYLIVAPEAMTAAAGDLAGIGSSVAAANAAAAGPTTAMLTAAADEVSTAIAAF  54


>gi|240172321|ref|ZP_04750980.1| hypothetical protein MkanA1_23603 [Mycobacterium kansasii ATCC 
12478]
Length=155

 Score = 55.1 bits (131),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 41/63 (66%), Positives = 49/63 (78%), Gaps = 0/63 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR  60
           MS+VIA PE + AAATDLA +GSTIGAANAAAAG+  ++L AGADEVSAA+AA     A+
Sbjct  1   MSFVIAVPELMAAAATDLAGIGSTIGAANAAAAGNVESVLAAGADEVSAAVAAVFGAHAQ  60

Query  61  PIR  63
             R
Sbjct  61  SYR  63


>gi|253798842|ref|YP_003031843.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289554118|ref|ZP_06443328.1| PE family protein [Mycobacterium tuberculosis KZN 605]
 gi|289762261|ref|ZP_06521639.1| PE-PGRS family protein [Mycobacterium tuberculosis GM 1503]
 8 more sequence titles
 
gi|307084745|ref|ZP_07493858.1| PE family protein [Mycobacterium tuberculosis SUMu012]
 gi|308379120|ref|ZP_07668899.1| PE family protein [Mycobacterium tuberculosis SUMu010]
 gi|253320345|gb|ACT24948.1| PE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289438750|gb|EFD21243.1| PE family protein [Mycobacterium tuberculosis KZN 605]
 gi|289709767|gb|EFD73783.1| PE-PGRS family protein [Mycobacterium tuberculosis GM 1503]
 gi|308358095|gb|EFP46946.1| PE family protein [Mycobacterium tuberculosis SUMu010]
 gi|308365683|gb|EFP54534.1| PE family protein [Mycobacterium tuberculosis SUMu012]
 gi|328458601|gb|AEB04024.1| PE family protein [Mycobacterium tuberculosis KZN 4207]
Length=99

 Score = 53.5 bits (127),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 57/99 (58%), Positives = 63/99 (64%), Gaps = 1/99 (1%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR  60
           MS+VIA+PEAL+AAATDLA + STI AANAAAA  TT  L   ADEVSA IAA     AR
Sbjct  1   MSFVIASPEALLAAATDLAAIRSTIRAANAAAAVPTTGALAPAADEVSAGIAALFGAQAR  60

Query  61  PIRHSVRGRRRSMSGSCRPWPQVGAPMRPPRPPA-SRRC  98
            I+ S   RRR M+GS      V   MR PR P  SR C
Sbjct  61  AIKRSAPRRRRFMTGSSNCLTPVEVHMRAPRLPTRSRTC  99


>gi|308232033|ref|ZP_07663977.1| putative PE family protein [Mycobacterium tuberculosis SUMu001]
 gi|308215225|gb|EFO74624.1| putative PE family protein [Mycobacterium tuberculosis SUMu001]
Length=135

 Score = 52.8 bits (125),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 57/99 (58%), Positives = 63/99 (64%), Gaps = 1/99 (1%)

Query  1    MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR  60
            MS+VIA+PEAL+AAATDLA + STI AANAAAA  TT  L   ADEVSA IAA     AR
Sbjct  37   MSFVIASPEALLAAATDLAAIRSTIRAANAAAAVPTTGALAPAADEVSAGIAALFGAQAR  96

Query  61   PIRHSVRGRRRSMSGSCRPWPQVGAPMRPPRPPA-SRRC  98
             I+ S   RRR M+GS      V   MR PR P  SR C
Sbjct  97   AIKRSAPRRRRFMTGSSNCLTPVEVHMRAPRLPTRSRTC  135


>gi|289753155|ref|ZP_06512533.1| predicted protein [Mycobacterium tuberculosis EAS054]
 gi|289693742|gb|EFD61171.1| predicted protein [Mycobacterium tuberculosis EAS054]
Length=123

 Score = 52.0 bits (123),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 55/110 (50%), Positives = 66/110 (60%), Gaps = 17/110 (15%)

Query  1    MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIA--------  52
            MS+VIAAPEALVA A+DLA +GS +  ANAAA   TTALL AGADEVSAAIA        
Sbjct  1    MSFVIAAPEALVAVASDLAGIGSALAEANAAALAPTTALLAAGADEVSAAIAALFGAHGQ  60

Query  53   AYSECTAR------PIRHSVRGRRRSMSGSCRPWPQVGAPMRPPRPPASR  96
            AY   +A+      P+   V  RRR + G CR   ++G      RP A+R
Sbjct  61   AYQTVSAQASAFHAPVCAGVDWRRRGVCG-CRGRQRLGGAEH--RPAAAR  107


>gi|240173304|ref|ZP_04751962.1| PE-PGRS family protein [Mycobacterium kansasii ATCC 12478]
Length=166

 Score = 48.9 bits (115),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 44/53 (84%), Positives = 49/53 (93%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+V AAPEALVAAA DLAT+GST+GAANAAAA +TT+LL AGADEVSAAIAA
Sbjct  1   MSFVFAAPEALVAAAGDLATIGSTVGAANAAAAANTTSLLAAGADEVSAAIAA  53


>gi|57116905|ref|YP_177831.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
 gi|61249984|sp|P0A686.1|WA22_MYCTU RecName: Full=WAG22 antigen; Flags: Precursor
 gi|61249985|sp|P0A687.1|WA22_MYCBO RecName: Full=WAG22 antigen; Flags: Precursor
 gi|38684054|emb|CAE55417.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=914

 Score = 47.4 bits (111),  Expect = 8e-04, Method: Composition-based stats.
 Identities = 40/53 (76%), Positives = 45/53 (85%), Gaps = 0/53 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAA  53
           MS+VIA PE + AAATDLA LGSTI  ANAAAA +TT+LL AGADE+SAAIAA
Sbjct  1   MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAA  53


>gi|148661564|ref|YP_001283087.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
 gi|148505716|gb|ABQ73525.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=156

 Score = 45.4 bits (106),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 41/60 (69%), Positives = 46/60 (77%), Gaps = 0/60 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR  60
           MS+VIA PE + AAATDLA LGSTI  ANAAAA +TT+LL AGADE+SAAIAA      R
Sbjct  41  MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  100


>gi|289443224|ref|ZP_06432968.1| PE-PGRS family protein [Mycobacterium tuberculosis T46]
 gi|289569820|ref|ZP_06450047.1| PE-PGRS family protein [Mycobacterium tuberculosis T17]
 gi|289574434|ref|ZP_06454661.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
 gi|289416143|gb|EFD13383.1| PE-PGRS family protein [Mycobacterium tuberculosis T46]
 gi|289538865|gb|EFD43443.1| PE-PGRS family protein [Mycobacterium tuberculosis K85]
 gi|289543574|gb|EFD47222.1| PE-PGRS family protein [Mycobacterium tuberculosis T17]
Length=134

 Score = 45.1 bits (105),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 41/60 (69%), Positives = 46/60 (77%), Gaps = 0/60 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR  60
           MS+VIA PE + AAATDLA LGSTI  ANAAAA +TT+LL AGADE+SAAIAA      R
Sbjct  41  MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  100


>gi|308372848|ref|ZP_07430125.2| putative PE family protein [Mycobacterium tuberculosis SUMu005]
 gi|308339648|gb|EFP28499.1| putative PE family protein [Mycobacterium tuberculosis SUMu005]
Length=182

 Score = 44.7 bits (104),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 47/65 (73%), Positives = 53/65 (82%), Gaps = 0/65 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR  60
           MS+VIAAPE + AAATDLA+L S+I AANAAAA +TTALL AGADEVS A+AA    TAR
Sbjct  36  MSFVIAAPEVIAAAATDLASLESSIAAANAAAAANTTALLAAGADEVSTAVAALFGATAR  95

Query  61  PIRHS  65
           PIR S
Sbjct  96  PIRRS  100


>gi|307079787|ref|ZP_07488957.1| putative PE family protein [Mycobacterium tuberculosis SUMu011]
 gi|308362367|gb|EFP51218.1| putative PE family protein [Mycobacterium tuberculosis SUMu011]
Length=222

 Score = 44.7 bits (104),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 41/60 (69%), Positives = 46/60 (77%), Gaps = 0/60 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR  60
           MS+VIA PE + AAATDLA LGSTI  ANAAAA +TT+LL AGADE+SAAIAA      R
Sbjct  37  MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  96


>gi|306972079|ref|ZP_07484740.1| putative PE family protein [Mycobacterium tuberculosis SUMu010]
 gi|308358443|gb|EFP47294.1| putative PE family protein [Mycobacterium tuberculosis SUMu010]
Length=182

 Score = 44.7 bits (104),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 41/60 (69%), Positives = 46/60 (77%), Gaps = 0/60 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR  60
           MS+VIA PE + AAATDLA LGSTI  ANAAAA +TT+LL AGADE+SAAIAA      R
Sbjct  37  MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  96


>gi|289554468|ref|ZP_06443678.1| predicted protein [Mycobacterium tuberculosis KZN 605]
 gi|289439100|gb|EFD21593.1| predicted protein [Mycobacterium tuberculosis KZN 605]
Length=954

 Score = 44.7 bits (104),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 41/60 (69%), Positives = 46/60 (77%), Gaps = 0/60 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR  60
           MS+VIA PE + AAATDLA LGSTI  ANAAAA +TT+LL AGADE+SAAIAA      R
Sbjct  41  MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  100


>gi|307084363|ref|ZP_07493476.1| putative PE family protein [Mycobacterium tuberculosis SUMu012]
 gi|308366026|gb|EFP54877.1| putative PE family protein [Mycobacterium tuberculosis SUMu012]
Length=199

 Score = 44.7 bits (104),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 41/60 (69%), Positives = 46/60 (77%), Gaps = 0/60 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR  60
           MS+VIA PE + AAATDLA LGSTI  ANAAAA +TT+LL AGADE+SAAIAA      R
Sbjct  37  MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  96


>gi|289750321|ref|ZP_06509699.1| PE-PGRS family protein [Mycobacterium tuberculosis T92]
 gi|289690908|gb|EFD58337.1| PE-PGRS family protein [Mycobacterium tuberculosis T92]
 gi|323719725|gb|EGB28842.1| PE-PGRS family protein [Mycobacterium tuberculosis CDC1551A]
Length=130

 Score = 44.7 bits (104),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 41/60 (69%), Positives = 46/60 (77%), Gaps = 0/60 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR  60
           MS+VIA PE + AAATDLA LGSTI  ANAAAA +TT+LL AGADE+SAAIAA      R
Sbjct  37  MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  96


>gi|297731304|ref|ZP_06960422.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506]
Length=233

 Score = 44.7 bits (104),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 41/60 (69%), Positives = 46/60 (77%), Gaps = 0/60 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR  60
           MS+VIA PE + AAATDLA LGSTI  ANAAAA +TT+LL AGADE+SAAIAA      R
Sbjct  37  MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  96


>gi|313658636|ref|ZP_07815516.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN V2475]
Length=255

 Score = 44.7 bits (104),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 41/60 (69%), Positives = 46/60 (77%), Gaps = 0/60 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR  60
           MS+VIA PE + AAATDLA LGSTI  ANAAAA +TT+LL AGADE+SAAIAA      R
Sbjct  37  MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  96


>gi|253799200|ref|YP_003032201.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|253320703|gb|ACT25306.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
 gi|328458955|gb|AEB04378.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=950

 Score = 44.7 bits (104),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 41/60 (69%), Positives = 46/60 (77%), Gaps = 0/60 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR  60
           MS+VIA PE + AAATDLA LGSTI  ANAAAA +TT+LL AGADE+SAAIAA      R
Sbjct  37  MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  96


>gi|297634316|ref|ZP_06952096.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=657

 Score = 44.7 bits (104),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 41/60 (69%), Positives = 46/60 (77%), Gaps = 0/60 (0%)

Query  1   MSYVIAAPEALVAAATDLATLGSTIGAANAAAAGSTTALLTAGADEVSAAIAAYSECTAR  60
           MS+VIA PE + AAATDLA LGSTI  ANAAAA +TT+LL AGADE+SAAIAA      R
Sbjct  37  MSFVIAVPETIAAAATDLADLGSTIAGANAAAAANTTSLLAAGADEISAAIAALFGAHGR  96



Lambda     K      H
   0.318    0.125    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 127350764394


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40