BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3655c Length=125 Score E Sequences producing significant alignments: (Bits) Value gi|15610791|ref|NP_218172.1| hypothetical protein Rv3655c [Mycob... 237 4e-61 gi|339296464|gb|AEJ48575.1| hypothetical protein CCDC5079_3386 [... 234 2e-60 gi|15843268|ref|NP_338305.1| hypothetical protein MT3756.2 [Myco... 183 6e-45 gi|148663518|ref|YP_001285041.1| hypothetical protein MRA_3690 [... 183 9e-45 gi|294992925|ref|ZP_06798616.1| hypothetical protein Mtub2_00060... 174 3e-42 gi|289572302|ref|ZP_06452529.1| conserved hypothetical protein [... 169 1e-40 gi|289572301|ref|ZP_06452528.1| conserved hypothetical protein [... 145 3e-33 gi|340628627|ref|YP_004747079.1| hypothetical protein MCAN_36751... 136 9e-31 gi|289759810|ref|ZP_06519188.1| conserved hypothetical protein [... 111 3e-23 gi|226303997|ref|YP_002763955.1| hypothetical protein RER_05080 ... 102 1e-20 gi|229494792|ref|ZP_04388548.1| conserved hypothetical protein [... 101 3e-20 gi|240173496|ref|ZP_04752154.1| hypothetical protein MkanA1_2956... 98.6 3e-19 gi|342862010|ref|ZP_08718654.1| hypothetical protein MCOL_24085 ... 97.8 5e-19 gi|169627578|ref|YP_001701227.1| hypothetical protein MAB_0474 [... 96.7 1e-18 gi|226363664|ref|YP_002781446.1| hypothetical protein ROP_42540 ... 93.6 1e-17 gi|41406518|ref|NP_959354.1| hypothetical protein MAP0420 [Mycob... 90.9 6e-17 gi|296169270|ref|ZP_06850915.1| conserved hypothetical protein [... 89.7 1e-16 gi|145221979|ref|YP_001132657.1| hypothetical protein Mflv_1387 ... 83.6 9e-15 gi|312138014|ref|YP_004005350.1| membrane protein [Rhodococcus e... 82.4 2e-14 gi|325675223|ref|ZP_08154908.1| hypothetical protein HMPREF0724_... 81.6 3e-14 gi|302530823|ref|ZP_07283165.1| predicted protein [Streptomyces ... 80.9 6e-14 gi|315446281|ref|YP_004079160.1| hypothetical protein Mspyr1_478... 79.7 1e-13 gi|118467298|ref|YP_879793.1| hypothetical protein MAV_0512 [Myc... 77.8 5e-13 gi|120406351|ref|YP_956180.1| hypothetical protein Mvan_5403 [My... 77.8 6e-13 gi|183985112|ref|YP_001853403.1| hypothetical protein MMAR_5577 ... 75.1 3e-12 gi|126437752|ref|YP_001073443.1| hypothetical protein Mjls_5188 ... 74.3 5e-12 gi|118619396|ref|YP_907728.1| hypothetical protein MUL_4228 [Myc... 74.3 6e-12 gi|333992577|ref|YP_004525191.1| hypothetical protein JDM601_393... 70.1 1e-10 gi|333917961|ref|YP_004491542.1| hypothetical protein AS9A_0283 ... 67.4 7e-10 gi|111021320|ref|YP_704292.1| hypothetical protein RHA1_ro04344 ... 67.4 7e-10 gi|291006271|ref|ZP_06564244.1| hypothetical protein SeryN2_1727... 66.6 1e-09 gi|326383469|ref|ZP_08205156.1| hypothetical protein SCNU_11051 ... 63.2 1e-08 gi|118470056|ref|YP_890386.1| hypothetical protein MSMEG_6165 [M... 62.8 1e-08 gi|300790605|ref|YP_003770896.1| hypothetical protein AMED_8801 ... 61.6 4e-08 gi|111225904|ref|YP_716698.1| hypothetical protein FRAAL6569 [Fr... 58.2 4e-07 gi|343926489|ref|ZP_08765994.1| hypothetical protein GOALK_060_0... 58.2 4e-07 gi|317508886|ref|ZP_07966525.1| hypothetical protein HMPREF9336_... 57.8 5e-07 gi|296141554|ref|YP_003648797.1| hypothetical protein Tpau_3885 ... 57.8 6e-07 gi|54022327|ref|YP_116569.1| hypothetical protein nfa3630 [Nocar... 57.4 6e-07 gi|289748167|ref|ZP_06507545.1| conserved hypothetical protein [... 53.5 1e-05 gi|86742974|ref|YP_483374.1| TadE-like protein [Frankia sp. CcI3... 53.1 1e-05 gi|269129018|ref|YP_003302388.1| hypothetical protein Tcur_4833 ... 51.6 4e-05 gi|325002266|ref|ZP_08123378.1| hypothetical protein PseP1_26053... 47.4 7e-04 gi|262200583|ref|YP_003271791.1| hypothetical protein Gbro_0569 ... 45.8 0.002 gi|296394987|ref|YP_003659871.1| hypothetical protein Srot_2605 ... 44.7 0.005 gi|254366204|ref|ZP_04982248.1| hypothetical protein TBHG_03591 ... 44.3 0.006 gi|256374435|ref|YP_003098095.1| hypothetical protein Amir_0280 ... 43.9 0.008 gi|119714632|ref|YP_921597.1| hypothetical protein Noca_0367 [No... 43.1 0.014 gi|311744550|ref|ZP_07718350.1| conserved hypothetical protein [... 42.0 0.028 gi|297627211|ref|YP_003688974.1| hypothetical protein PFREUD_206... 41.2 0.049 >gi|15610791|ref|NP_218172.1| hypothetical protein Rv3655c [Mycobacterium tuberculosis H37Rv] gi|2960079|emb|CAA17977.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv] Length=125 Score = 237 bits (605), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 124/125 (99%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 +EAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA Sbjct 1 MEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 Query 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEPGSTAARPPCLPSRWSRCCCASP 120 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEPGSTAARPPCLPSRWSRCCCASP Sbjct 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEPGSTAARPPCLPSRWSRCCCASP 120 Query 121 VRVHI 125 VRVHI Sbjct 121 VRVHI 125 >gi|339296464|gb|AEJ48575.1| hypothetical protein CCDC5079_3386 [Mycobacterium tuberculosis CCDC5079] gi|339300063|gb|AEJ52173.1| hypothetical protein CCDC5180_3336 [Mycobacterium tuberculosis CCDC5180] Length=125 Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 123/125 (99%), Positives = 124/125 (99%), Gaps = 0/125 (0%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 +EAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA Sbjct 1 MEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 Query 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEPGSTAARPPCLPSRWSRCCCASP 120 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEPG TAARPPCLPSRWSRCCCASP Sbjct 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEPGVTAARPPCLPSRWSRCCCASP 120 Query 121 VRVHI 125 VRVHI Sbjct 121 VRVHI 125 >gi|15843268|ref|NP_338305.1| hypothetical protein MT3756.2 [Mycobacterium tuberculosis CDC1551] gi|31794825|ref|NP_857318.1| hypothetical protein Mb3679c [Mycobacterium bovis AF2122/97] gi|121639568|ref|YP_979792.1| hypothetical protein BCG_3713c [Mycobacterium bovis BCG str. Pasteur 1173P2] 51 more sequence titles Length=99 Score = 183 bits (465), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 98/99 (99%), Positives = 99/99 (100%), Gaps = 0/99 (0%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 +EAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA Sbjct 1 MEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 Query 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEPG 99 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEPG Sbjct 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEPG 99 >gi|148663518|ref|YP_001285041.1| hypothetical protein MRA_3690 [Mycobacterium tuberculosis H37Ra] gi|148507670|gb|ABQ75479.1| hypothetical protein MRA_3690 [Mycobacterium tuberculosis H37Ra] Length=180 Score = 183 bits (464), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 99/99 (100%), Positives = 99/99 (100%), Gaps = 0/99 (0%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA Sbjct 82 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 141 Query 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEPG 99 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEPG Sbjct 142 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEPG 180 >gi|294992925|ref|ZP_06798616.1| hypothetical protein Mtub2_00060 [Mycobacterium tuberculosis 210] Length=95 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 94/95 (99%), Positives = 95/95 (100%), Gaps = 0/95 (0%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 +EAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA Sbjct 1 MEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 Query 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISV 95 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISV Sbjct 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISV 95 >gi|289572302|ref|ZP_06452529.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289536733|gb|EFD41311.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] Length=173 Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 92/92 (100%), Positives = 92/92 (100%), Gaps = 0/92 (0%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA Sbjct 82 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 141 Query 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARA 92 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARA Sbjct 142 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARA 173 >gi|289572301|ref|ZP_06452528.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289536732|gb|EFD41310.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] Length=196 Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 105/114 (93%), Positives = 106/114 (93%), Gaps = 2/114 (1%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA Sbjct 82 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 141 Query 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEPGSTAARPP-CLP-SRW 112 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISV EPG TA R C+ SRW Sbjct 142 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVDEPGLTAVRHRVCVAMSRW 195 >gi|340628627|ref|YP_004747079.1| hypothetical protein MCAN_36751 [Mycobacterium canettii CIPT 140010059] gi|340006817|emb|CCC46006.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=99 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 95/98 (97%), Positives = 96/98 (98%), Gaps = 0/98 (0%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 +EAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGD RSA DVARSIAPRA Sbjct 1 MEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDARSAIDVARSIAPRA 60 Query 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEP 98 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEP Sbjct 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEP 98 >gi|289759810|ref|ZP_06519188.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289715374|gb|EFD79386.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] Length=60 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 57/58 (99%), Positives = 58/58 (100%), Gaps = 0/58 (0%) Query 40 LAARGDVRSATDVARSIAPRAALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAE 97 +AARGDVRSATDVARSIAPRAALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAE Sbjct 1 MAARGDVRSATDVARSIAPRAALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAE 58 >gi|226303997|ref|YP_002763955.1| hypothetical protein RER_05080 [Rhodococcus erythropolis PR4] gi|226183112|dbj|BAH31216.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=120 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/99 (58%), Positives = 72/99 (73%), Gaps = 0/99 (0%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 VEAA+A+A++V V+VLC+ GV AVSMQVRC+DAAREAARL ARGD SA AR IAP+ Sbjct 18 VEAAIALASIVTVVVLCIGGVLAVSMQVRCVDAAREAARLVARGDRESAVATARRIAPQD 77 Query 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEPG 99 A + V F VA V+A S LLP +DI++ A++ E G Sbjct 78 ASISVEIVDGFAVAVVSAESTLLPLVDISSEAVAAVESG 116 >gi|229494792|ref|ZP_04388548.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229318288|gb|EEN84153.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=119 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/99 (58%), Positives = 71/99 (72%), Gaps = 0/99 (0%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 VEAA+A+A++V V+VLC+ GV AVSMQVRC+DAAREAARL ARGD SA AR IAP Sbjct 17 VEAAIALASIVTVVVLCIGGVLAVSMQVRCVDAAREAARLVARGDRESAVATARRIAPED 76 Query 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEPG 99 A + V F VA V+A S LLP +DI++ A++ E G Sbjct 77 ASISVEIVDGFAVAVVSAESALLPLVDISSEAVAAVESG 115 >gi|240173496|ref|ZP_04752154.1| hypothetical protein MkanA1_29566 [Mycobacterium kansasii ATCC 12478] Length=90 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 66/89 (75%), Positives = 78/89 (88%), Gaps = 0/89 (0%) Query 10 LVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRAALVQVHRDG 69 +V+VLVLC+AG+TAVSMQ+RCIDAAREAARLAARGD RSA DVAR IAP AA +++ RDG Sbjct 1 MVVVLVLCMAGLTAVSMQLRCIDAAREAARLAARGDQRSAVDVARRIAPPAAQIELRRDG 60 Query 70 EFVVATVTAHSNLLPTLDIAARAISVAEP 98 EF+VA+V A S LLPTLDIAA A++ AEP Sbjct 61 EFLVASVVARSKLLPTLDIAANAVAAAEP 89 >gi|342862010|ref|ZP_08718654.1| hypothetical protein MCOL_24085 [Mycobacterium colombiense CECT 3035] gi|342130550|gb|EGT83859.1| hypothetical protein MCOL_24085 [Mycobacterium colombiense CECT 3035] Length=100 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 73/98 (75%), Positives = 84/98 (86%), Gaps = 0/98 (0%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 +EAAL IA LV+VLVLCLAGV+AVSMQVRC+DAAREAARLAARGD RSA AR +AP Sbjct 1 MEAALGIAALVVVLVLCLAGVSAVSMQVRCVDAAREAARLAARGDERSAVAAARRLAPGG 60 Query 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEP 98 A V +HRDG+F+VATV AHS LLPT+DIAA+A+S AEP Sbjct 61 ARVDLHRDGDFLVATVVAHSKLLPTIDIAAKAVSAAEP 98 >gi|169627578|ref|YP_001701227.1| hypothetical protein MAB_0474 [Mycobacterium abscessus ATCC 19977] gi|169239545|emb|CAM60573.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=88 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 53/86 (62%), Positives = 63/86 (74%), Gaps = 0/86 (0%) Query 13 VLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRAALVQVHRDGEFV 72 +LV+C AG+ AVSMQV C+DA+REAARLAARGD A VAR +AP A V+V RDG +V Sbjct 1 MLVMCAAGIQAVSMQVHCVDASREAARLAARGDDADARTVARRLAPPGATVEVRRDGGYV 60 Query 73 VATVTAHSNLLPTLDIAARAISVAEP 98 VA V A S LLP + IAA +IS EP Sbjct 61 VARVAATSRLLPAIAIAAESISAMEP 86 >gi|226363664|ref|YP_002781446.1| hypothetical protein ROP_42540 [Rhodococcus opacus B4] gi|226242153|dbj|BAH52501.1| hypothetical membrane protein [Rhodococcus opacus B4] Length=125 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/83 (58%), Positives = 61/83 (74%), Gaps = 0/83 (0%) Query 16 LCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRAALVQVHRDGEFVVAT 75 LC+ +TAV++ VRC+D+AREAARL ARGD SA A +AP A V V +GEFVVAT Sbjct 33 LCVGAITAVTLHVRCVDSAREAARLTARGDHESAISAAERVAPGGAEVSVRTEGEFVVAT 92 Query 76 VTAHSNLLPTLDIAARAISVAEP 98 V AHS LLP ++I+A A++V EP Sbjct 93 VRAHSPLLPLVNISAEAVAVLEP 115 >gi|41406518|ref|NP_959354.1| hypothetical protein MAP0420 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394867|gb|AAS02737.1| hypothetical protein MAP_0420 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336460804|gb|EGO39689.1| hypothetical protein MAPs_36240 [Mycobacterium avium subsp. paratuberculosis S397] Length=89 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 60/87 (69%), Positives = 69/87 (80%), Gaps = 0/87 (0%) Query 12 LVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRAALVQVHRDGEF 71 +VLV CLAGVTAV+MQVRC+DAAREAARLAARGD RSAT A + P A V + RDG+ Sbjct 1 MVLVACLAGVTAVAMQVRCVDAAREAARLAARGDERSATAAAVRLGPAGARVDLRRDGDL 60 Query 72 VVATVTAHSNLLPTLDIAARAISVAEP 98 +VATV AHS LLP LDI A+A+S AEP Sbjct 61 LVATVVAHSKLLPALDIRAQAVSAAEP 87 >gi|296169270|ref|ZP_06850915.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896062|gb|EFG75735.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=100 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/77 (73%), Positives = 64/77 (84%), Gaps = 0/77 (0%) Query 22 TAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRAALVQVHRDGEFVVATVTAHSN 81 TAVSMQ+RC+DAAREAARLAARGD SA AR IAP A ++VHRDGEF+VA+V AHS Sbjct 22 TAVSMQIRCVDAAREAARLAARGDEPSALGAARRIAPAGARIEVHRDGEFLVASVVAHSK 81 Query 82 LLPTLDIAARAISVAEP 98 LLP LDIAA+A+S AEP Sbjct 82 LLPALDIAAKAVSAAEP 98 >gi|145221979|ref|YP_001132657.1| hypothetical protein Mflv_1387 [Mycobacterium gilvum PYR-GCK] gi|145214465|gb|ABP43869.1| hypothetical protein Mflv_1387 [Mycobacterium gilvum PYR-GCK] Length=184 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 62/99 (63%), Positives = 72/99 (73%), Gaps = 0/99 (0%) Query 2 EAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRAA 61 EAA A LV VL +CLAG+TAVSMQVRCIDAAREAARLAARGD +A VA+ IAP A Sbjct 86 EAAFATVALVAVLAVCLAGLTAVSMQVRCIDAAREAARLAARGDSAAAARVAQQIAPSGA 145 Query 62 LVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEPGS 100 V++ RDG F +A VTA S LLP + I+A +S EPG Sbjct 146 AVEIRRDGAFAIARVTARSALLPAVSISAEGVSALEPGG 184 >gi|312138014|ref|YP_004005350.1| membrane protein [Rhodococcus equi 103S] gi|311887353|emb|CBH46664.1| putative membrane protein [Rhodococcus equi 103S] Length=118 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/98 (58%), Positives = 74/98 (76%), Gaps = 0/98 (0%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 VEAA+AIA++V V+VLC+ + AVS QVRCIDAAREAARLAARGD +A A +AP Sbjct 16 VEAAIAIASIVTVVVLCIGAIVAVSTQVRCIDAAREAARLAARGDRPNAAVAAGRVAPHG 75 Query 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEP 98 A +++ DG FVVATV A + LLP ++++A A++V EP Sbjct 76 AEIEIRDDGAFVVATVRARATLLPVVELSAEAVAVKEP 113 >gi|325675223|ref|ZP_08154908.1| hypothetical protein HMPREF0724_12690 [Rhodococcus equi ATCC 33707] gi|325553929|gb|EGD23606.1| hypothetical protein HMPREF0724_12690 [Rhodococcus equi ATCC 33707] Length=118 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/98 (58%), Positives = 74/98 (76%), Gaps = 0/98 (0%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 VEAA+AIA++V V+VLC+ + AVS QVRCIDAAREAARLAARGD +A A +AP Sbjct 16 VEAAIAIASIVTVVVLCIGAIVAVSTQVRCIDAAREAARLAARGDRPNAAVAAGRVAPLG 75 Query 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEP 98 A +++ DG FVVATV A + LLP ++++A A++V EP Sbjct 76 AEIEIRDDGAFVVATVRARATLLPVVELSAEAVAVKEP 113 >gi|302530823|ref|ZP_07283165.1| predicted protein [Streptomyces sp. AA4] gi|302439718|gb|EFL11534.1| predicted protein [Streptomyces sp. AA4] Length=166 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 46/101 (46%), Positives = 68/101 (68%), Gaps = 2/101 (1%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 VEAAL++ L VL + LAG +A++ +RC+DAAREAARL A G +A V ++IAPR Sbjct 67 VEAALSLGALTAVLAMLLAGTSAIAGHLRCLDAAREAARLTAAGQSGAADAVVQTIAPRG 126 Query 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEPGST 101 A + +HR G+ + A VT +++L L ++A A ++ EPG T Sbjct 127 AHLTIHRTGDGLTAEVT--TDVLSALHLSATAYAILEPGLT 165 >gi|315446281|ref|YP_004079160.1| hypothetical protein Mspyr1_47850 [Mycobacterium sp. Spyr1] gi|315264584|gb|ADU01326.1| hypothetical protein Mspyr1_47850 [Mycobacterium sp. Spyr1] Length=93 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 58/91 (64%), Positives = 68/91 (75%), Gaps = 0/91 (0%) Query 10 LVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRAALVQVHRDG 69 LV VL +CLAG+TAVSMQVRCIDAAREAARLAARGD +A VA+ IAP A V++ RDG Sbjct 3 LVAVLAVCLAGLTAVSMQVRCIDAAREAARLAARGDSAAAARVAQQIAPSGAAVEIRRDG 62 Query 70 EFVVATVTAHSNLLPTLDIAARAISVAEPGS 100 F +A VTA S LLP + I+A +S EPG Sbjct 63 AFAIARVTARSALLPAVSISAEGVSALEPGG 93 >gi|118467298|ref|YP_879793.1| hypothetical protein MAV_0512 [Mycobacterium avium 104] gi|118168585|gb|ABK69482.1| conserved hypothetical protein [Mycobacterium avium 104] Length=89 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 61/87 (71%), Positives = 70/87 (81%), Gaps = 0/87 (0%) Query 12 LVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRAALVQVHRDGEF 71 +VLV CLAG+TAVSMQVRC+DAAREAARLAARGD RSAT A +AP A V + RDG+ Sbjct 1 MVLVACLAGITAVSMQVRCVDAAREAARLAARGDERSATAAAARLAPAGARVDLRRDGDL 60 Query 72 VVATVTAHSNLLPTLDIAARAISVAEP 98 +VATV AHS LLP LDI A+A+S AEP Sbjct 61 LVATVVAHSKLLPALDIRAQAVSAAEP 87 >gi|120406351|ref|YP_956180.1| hypothetical protein Mvan_5403 [Mycobacterium vanbaalenii PYR-1] gi|119959169|gb|ABM16174.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=93 Score = 77.8 bits (190), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 56/79 (71%), Positives = 62/79 (79%), Gaps = 0/79 (0%) Query 20 GVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRAALVQVHRDGEFVVATVTAH 79 G+TAVSMQVRCIDAAREAARLAARGD SAT VAR IAP A+V V RDG+FVVA VTA Sbjct 13 GLTAVSMQVRCIDAAREAARLAARGDDASATRVARQIAPARAVVAVRRDGDFVVARVTAG 72 Query 80 SNLLPTLDIAARAISVAEP 98 S +LP + IAA +S EP Sbjct 73 SAVLPGIVIAAEGVSAVEP 91 >gi|183985112|ref|YP_001853403.1| hypothetical protein MMAR_5577 [Mycobacterium marinum M] gi|183178438|gb|ACC43548.1| conserved hypothetical protein [Mycobacterium marinum M] Length=88 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 57/88 (65%), Positives = 71/88 (81%), Gaps = 0/88 (0%) Query 12 LVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRAALVQVHRDGEF 71 +VL LCLAG+ A+SMQ+RC+DAAREAARLAARGD +A VAR+IAP AA V++ RDGE Sbjct 1 MVLALCLAGICALSMQLRCVDAAREAARLAARGDTGTALQVARAIAPPAARVRLRRDGEL 60 Query 72 VVATVTAHSNLLPTLDIAARAISVAEPG 99 V+ +V A S LLP L I+A A++VAEPG Sbjct 61 VLVSVVARSKLLPELAISAEAVAVAEPG 88 >gi|126437752|ref|YP_001073443.1| hypothetical protein Mjls_5188 [Mycobacterium sp. JLS] gi|126237552|gb|ABO00953.1| hypothetical protein Mjls_5188 [Mycobacterium sp. JLS] Length=92 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 51/90 (57%), Positives = 70/90 (78%), Gaps = 0/90 (0%) Query 10 LVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRAALVQVHRDG 69 +V+VL +C+AG++AV QVRC+DAAREAARLAARGD RSAT+VA IAP A V + DG Sbjct 1 MVVVLGVCVAGLSAVGAQVRCVDAAREAARLAARGDDRSATEVAGRIAPNGAAVDLRWDG 60 Query 70 EFVVATVTAHSNLLPTLDIAARAISVAEPG 99 + V A V++ +L ++I+A+A++VAEPG Sbjct 61 DLVYARVSSRPPILFGVNISAQAVAVAEPG 90 >gi|118619396|ref|YP_907728.1| hypothetical protein MUL_4228 [Mycobacterium ulcerans Agy99] gi|118571506|gb|ABL06257.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=88 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 57/88 (65%), Positives = 71/88 (81%), Gaps = 0/88 (0%) Query 12 LVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRAALVQVHRDGEF 71 +VL LCLAG+ A+SMQ+RC+DAAREAARLAARGD +A VAR+IAP AA V++ RDGE Sbjct 1 MVLALCLAGICALSMQLRCVDAAREAARLAARGDTGTALRVARAIAPPAARVRLRRDGEL 60 Query 72 VVATVTAHSNLLPTLDIAARAISVAEPG 99 V+ +V A S LLP L I+A A++VAEPG Sbjct 61 VLVSVVARSKLLPELAISAEAVAVAEPG 88 >gi|333992577|ref|YP_004525191.1| hypothetical protein JDM601_3937 [Mycobacterium sp. JDM601] gi|333488545|gb|AEF37937.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=115 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/79 (64%), Positives = 60/79 (76%), Gaps = 0/79 (0%) Query 20 GVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRAALVQVHRDGEFVVATVTAH 79 G++AVS Q+RC+DAAREAARLAARGD +AT V R IAP A V++H DG FVVATVT Sbjct 35 GISAVSAQLRCLDAAREAARLAARGDTPAATAVVRRIAPAGAAVRLHPDGGFVVATVTVR 94 Query 80 SNLLPTLDIAARAISVAEP 98 LLP L ++A A+S AEP Sbjct 95 PALLPGLVVSAEAVSAAEP 113 >gi|333917961|ref|YP_004491542.1| hypothetical protein AS9A_0283 [Amycolicicoccus subflavus DQS3-9A1] gi|333480182|gb|AEF38742.1| hypothetical protein AS9A_0283 [Amycolicicoccus subflavus DQS3-9A1] Length=105 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 47/98 (48%), Positives = 59/98 (61%), Gaps = 2/98 (2%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 VEAAL L+L + LCL GV A VRC+D AREAA ARGD +A D AR APR Sbjct 3 VEAALVTVALMLTVWLCLGGVFAGLAYVRCVDTAREAALGVARGDA-AAVDRARMAAPRG 61 Query 61 ALVQVHRD-GEFVVATVTAHSNLLPTLDIAARAISVAE 97 A +++ D G V A V A S +LP L + A +++V E Sbjct 62 AAIEIVGDRGSVVTARVVARSPVLPLLTLRAESVTVIE 99 >gi|111021320|ref|YP_704292.1| hypothetical protein RHA1_ro04344 [Rhodococcus jostii RHA1] gi|110820850|gb|ABG96134.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=124 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 46/83 (56%), Positives = 59/83 (72%), Gaps = 0/83 (0%) Query 16 LCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRAALVQVHRDGEFVVAT 75 LC+ +TA ++ VRC+D+AREAARLAARGD SA A +AP A V V +GEFVVAT Sbjct 32 LCVGAITAATLHVRCVDSAREAARLAARGDRESAISTAAKVAPDGADVSVRAEGEFVVAT 91 Query 76 VTAHSNLLPTLDIAARAISVAEP 98 V A S LLP ++I+A A++ EP Sbjct 92 VRARSPLLPLVNISAEAVAALEP 114 >gi|291006271|ref|ZP_06564244.1| hypothetical protein SeryN2_17273 [Saccharopolyspora erythraea NRRL 2338] Length=224 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/105 (44%), Positives = 59/105 (57%), Gaps = 2/105 (1%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 VEAAL I +LVLV L + G+ AV Q+RC DAA EAARL ARG A R +AP Sbjct 3 VEAALGICSLVLVFALGVGGLCAVIGQLRCTDAAVEAARLTARGSQAEAAGAVRRLAPTG 62 Query 61 ALVQVHRDGEFVVATVTA--HSNLLPTLDIAARAISVAEPGSTAA 103 A + V G+ V A V + LP + + A++V EPG+ A Sbjct 63 ATLTVSVTGDQVTAEVRSPLPGGFLPGKWLKSTALAVMEPGAATA 107 >gi|326383469|ref|ZP_08205156.1| hypothetical protein SCNU_11051 [Gordonia neofelifaecis NRRL B-59395] gi|326197875|gb|EGD55062.1| hypothetical protein SCNU_11051 [Gordonia neofelifaecis NRRL B-59395] Length=122 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/85 (44%), Positives = 53/85 (63%), Gaps = 1/85 (1%) Query 14 LVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRAALVQVHRDGEFVV 73 L+L + V S Q+RC DAARE ARL A GD +A V ++APR A ++V DG+ VV Sbjct 35 LLLGVGAVAGASAQIRCTDAAREVARLTAAGD-STARRVGTAVAPRGAEIEVRGDGDEVV 93 Query 74 ATVTAHSNLLPTLDIAARAISVAEP 98 V++ LLP + ++A A++ EP Sbjct 94 VQVSSGVPLLPLVTVSATAVAAREP 118 >gi|118470056|ref|YP_890386.1| hypothetical protein MSMEG_6165 [Mycobacterium smegmatis str. MC2 155] gi|118171343|gb|ABK72239.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=186 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/81 (63%), Positives = 60/81 (75%), Gaps = 2/81 (2%) Query 19 AGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRAALVQVHRDGEFVVATVTA 78 G++A+SMQVRC+DAAREAARLAARGD SA +VAR IAPR ALV+V DG F+VA V+ Sbjct 107 GGLSAISMQVRCVDAAREAARLAARGDG-SAAEVARRIAPRGALVEVRGDGVFLVARVSV 165 Query 79 HSNLLPTLDIAARAISVAEPG 99 + LP IAA A S EPG Sbjct 166 DA-PLPGFTIAAEAASAREPG 185 >gi|300790605|ref|YP_003770896.1| hypothetical protein AMED_8801 [Amycolatopsis mediterranei U32] gi|299800119|gb|ADJ50494.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340532294|gb|AEK47499.1| hypothetical protein RAM_45160 [Amycolatopsis mediterranei S699] Length=111 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 48/102 (48%), Positives = 64/102 (63%), Gaps = 2/102 (1%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 VE AL +A L +V VL +AG+TA++ Q+RC DAAREAARL ARG A I P Sbjct 3 VETALGLAGLTVVTVLLIAGLTALTSQLRCTDAAREAARLLARGQPTEAAAAVHKIGPPG 62 Query 61 ALVQVHRDGEFVVATVTAH--SNLLPTLDIAARAISVAEPGS 100 A + + G+ + A VTAH + LLP + + A A +VAEPG+ Sbjct 63 ANLAFEQVGDTITARVTAHPAAGLLPAIHLDATAYAVAEPGT 104 >gi|111225904|ref|YP_716698.1| hypothetical protein FRAAL6569 [Frankia alni ACN14a] gi|111153436|emb|CAJ65192.1| Hypothetical protein FRAAL6569 [Frankia alni ACN14a] Length=158 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/104 (38%), Positives = 58/104 (56%), Gaps = 7/104 (6%) Query 2 EAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARS-IAPRA 60 E A+ + +L +V L V+AV Q RC DAAR ARLAARG+ ++ A + APR Sbjct 41 ELAMGLPSLFVVFFLAAWMVSAVGAQARCADAARVGARLAARGEAQATVSAAVTRAAPRG 100 Query 61 ALVQVHRDGEFVVATVTAH------SNLLPTLDIAARAISVAEP 98 A +++HRD + + V+A L+P L + A A++ EP Sbjct 101 ATLRLHRDADLLDVEVSAPVGAAGLGRLVPALVVTAHAVTPVEP 144 >gi|343926489|ref|ZP_08765994.1| hypothetical protein GOALK_060_01530 [Gordonia alkanivorans NBRC 16433] gi|343763727|dbj|GAA12920.1| hypothetical protein GOALK_060_01530 [Gordonia alkanivorans NBRC 16433] Length=133 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 40/81 (50%), Positives = 52/81 (65%), Gaps = 4/81 (4%) Query 18 LAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRAALVQVHRDGEFVVATVT 77 + GVTA Q+RC DAAREAARL A GD SA +VA+ +A A+V V G+ VVA V Sbjct 43 IGGVTA---QIRCTDAAREAARLTAAGD-DSAREVAKRMAGDRAVVLVSVQGKRVVAQVR 98 Query 78 AHSNLLPTLDIAARAISVAEP 98 LLP L ++A+A++ EP Sbjct 99 TSVALLPGLTMSAQAVAAKEP 119 >gi|317508886|ref|ZP_07966525.1| hypothetical protein HMPREF9336_02897 [Segniliparus rugosus ATCC BAA-974] gi|316252847|gb|EFV12278.1| hypothetical protein HMPREF9336_02897 [Segniliparus rugosus ATCC BAA-974] Length=116 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 43/98 (44%), Positives = 64/98 (66%), Gaps = 0/98 (0%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 VE+A+ +A+++ VL + AV +RC+DAAREAARLAARGD+ A A+ I PR Sbjct 15 VESAIGLASILFVLFGSALALLAVGDHIRCVDAAREAARLAARGDLGHARSTAQRIGPRG 74 Query 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEP 98 A + + + VVATVT + LL ++D+ A+A++ EP Sbjct 75 AEISIDEGADSVVATVTFKAPLLASVDLGAQAVAAIEP 112 >gi|296141554|ref|YP_003648797.1| hypothetical protein Tpau_3885 [Tsukamurella paurometabola DSM 20162] gi|296029688|gb|ADG80458.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=102 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 46/99 (47%), Positives = 63/99 (64%), Gaps = 0/99 (0%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 +EAALA+A+LV VL++ + + V+ QVRC+DAAREAARLAARGD A+ + P Sbjct 1 MEAALAVASLVTVLIVSIGAIVGVTAQVRCVDAAREAARLAARGDDDRASRAIAEVGPPG 60 Query 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEPG 99 A V R G+ V V A LP L ++A A+++ EPG Sbjct 61 ASSAVSRSGDTVTVRVEAPVPALPGLTVSATAVAMLEPG 99 >gi|54022327|ref|YP_116569.1| hypothetical protein nfa3630 [Nocardia farcinica IFM 10152] gi|54013835|dbj|BAD55205.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=173 Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 50/100 (50%), Positives = 69/100 (69%), Gaps = 1/100 (1%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 VEAA+A+A +++V+V+C+ + A S QVRC+DAAREAARL ARGD A A +AP Sbjct 75 VEAAIALAAIMVVVVVCVGALLAASTQVRCVDAAREAARLEARGDPVDARAAAERVAPPG 134 Query 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEPGS 100 A + + RDG+FVVA V+A + LLP L + A++ EPG Sbjct 135 ADIAIRRDGDFVVAVVSARAPLLP-LRLRGEAVAAREPGQ 173 >gi|289748167|ref|ZP_06507545.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289688754|gb|EFD56183.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=107 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 52/59 (89%), Positives = 54/59 (92%), Gaps = 0/59 (0%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPR 59 +EAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRS T+ IAPR Sbjct 1 MEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSETNHDPCIAPR 59 >gi|86742974|ref|YP_483374.1| TadE-like protein [Frankia sp. CcI3] gi|86569836|gb|ABD13645.1| TadE-like [Frankia sp. CcI3] Length=295 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/103 (37%), Positives = 56/103 (55%), Gaps = 7/103 (6%) Query 2 EAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATD-VARSIAPRA 60 E A+ + +L +V L + AV+ Q RC DAAR ARLAARG+ SA + AP Sbjct 174 ELAIGLPSLFVVFFLAAWMLGAVAAQTRCADAARIGARLAARGEPDSAVHTMVIQAAPVG 233 Query 61 ALVQVHRDGEFVVATVTAH------SNLLPTLDIAARAISVAE 97 + V +HR + V+ H S L+P +++AARA++ E Sbjct 234 STVTLHRGAGRLEVQVSVHVGGIGVSRLVPGIEVAARAVTPVE 276 >gi|269129018|ref|YP_003302388.1| hypothetical protein Tcur_4833 [Thermomonospora curvata DSM 43183] gi|268313976|gb|ACZ00351.1| hypothetical protein Tcur_4833 [Thermomonospora curvata DSM 43183] Length=105 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 41/102 (41%), Positives = 58/102 (57%), Gaps = 6/102 (5%) Query 5 LAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRAAL-V 63 +A+ L+LV V L GVT S Q+ C DAA+ AR A+RG+ A ++A + A A V Sbjct 1 MALPALLLVTVAALWGVTIASAQLACADAAKTGARAASRGEPLPAVELAVAQAAPAGADV 60 Query 64 QVHRDGEFVVATVTAHSNL-----LPTLDIAARAISVAEPGS 100 +VHRD E VTA + LP + + ARA++ EPG+ Sbjct 61 RVHRDAELSTVEVTARIHAPGMTGLPPVVLHARALAATEPGA 102 >gi|325002266|ref|ZP_08123378.1| hypothetical protein PseP1_26053 [Pseudonocardia sp. P1] Length=320 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 44/99 (45%), Positives = 57/99 (58%), Gaps = 2/99 (2%) Query 5 LAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRAALVQ 64 +A+ TLV V +A V AV+ VRC DAARE R AARGD A ++AP A + Sbjct 1 MALGTLVAVTAAAVAAVAAVAAGVRCTDAARELVRQAARGDTDRGRAAAAALAPGDAQTE 60 Query 65 VHRDGEFVVATV-TAHSNLLPTLDIAARAISVAEPGSTA 102 + +G+ V+ATV T LLP L + A +VAEPG T Sbjct 61 LRIEGDTVIATVRTRPVGLLP-LSVTGSAAAVAEPGLTG 98 >gi|262200583|ref|YP_003271791.1| hypothetical protein Gbro_0569 [Gordonia bronchialis DSM 43247] gi|262083930|gb|ACY19898.1| hypothetical protein Gbro_0569 [Gordonia bronchialis DSM 43247] Length=114 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/98 (40%), Positives = 59/98 (61%), Gaps = 1/98 (1%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 VEAA AIA +V+ +++ + GV+A+ Q+RC DAARE ARL A GD A D + + Sbjct 4 VEAAYAIAAIVVTVLIAVGGVSAMIAQIRCTDAAREVARLTAAGD-GGARDAGQRMVGDD 62 Query 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEP 98 + + + E V V++H LP L ++A A++V EP Sbjct 63 VTIAIAEEHERVSVVVSSHVLFLPGLTVSATAVAVKEP 100 >gi|296394987|ref|YP_003659871.1| hypothetical protein Srot_2605 [Segniliparus rotundus DSM 44985] gi|296182134|gb|ADG99040.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length=105 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 44/98 (45%), Positives = 58/98 (60%), Gaps = 0/98 (0%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPRA 60 VE+A +A +V VL + AV +RC+DAAREAARLAARGD R+A A I PR Sbjct 4 VESAFGVAAIVFVLFGSALALLAVGDHIRCVDAAREAARLAARGDARAARSSAERIGPRG 63 Query 61 ALVQVHRDGEFVVATVTAHSNLLPTLDIAARAISVAEP 98 A + + +VATVT + L T+D+ A A + EP Sbjct 64 AQIAIDDRSGMIVATVTFRAPFLTTVDLGASAAAAPEP 101 >gi|254366204|ref|ZP_04982248.1| hypothetical protein TBHG_03591 [Mycobacterium tuberculosis str. Haarlem] gi|134151716|gb|EBA43761.1| hypothetical protein TBHG_03591 [Mycobacterium tuberculosis str. Haarlem] Length=82 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 47/87 (55%), Positives = 52/87 (60%), Gaps = 10/87 (11%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIAPR- 59 +EAALAIATLVLVLVLCLAGVTAVSMQVRCIDAA R R+ T R +P+ Sbjct 1 MEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAPR-----GRSMPRAWTYARRPTSPQH 55 Query 60 --AALVQVHRDGEFVVAT--VTAHSNL 82 A + G V TAHSNL Sbjct 56 RPACGLGPGAPGRRVCGPPLFTAHSNL 82 >gi|256374435|ref|YP_003098095.1| hypothetical protein Amir_0280 [Actinosynnema mirum DSM 43827] gi|255918738|gb|ACU34249.1| hypothetical protein Amir_0280 [Actinosynnema mirum DSM 43827] Length=138 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 35/68 (52%), Positives = 40/68 (59%), Gaps = 1/68 (1%) Query 1 VEAALAIATLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVA-RSIAPR 59 VE AL + T +LVL C GV V +RC DAAREAARL ARGD S A IAP+ Sbjct 18 VELALTMLTALLVLACCAEGVLTVVDHLRCTDAAREAARLIARGDPESEARAAVGRIAPK 77 Query 60 AALVQVHR 67 A + V R Sbjct 78 NATLTVTR 85 >gi|119714632|ref|YP_921597.1| hypothetical protein Noca_0367 [Nocardioides sp. JS614] gi|119535293|gb|ABL79910.1| conserved hypothetical protein [Nocardioides sp. JS614] Length=125 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 31/74 (42%), Positives = 40/74 (55%), Gaps = 6/74 (8%) Query 9 TLVLVLVLCLAGVTAVSMQVRCIDAAREAARLAARGD-VRSATDVARSIAPRAALVQVHR 67 TL LV +L + + QVR +DAARE AR ARGD V +A + +AP + V VH Sbjct 30 TLGLVWLLAVG-----AAQVRAVDAARETARAVARGDSVTAAVARGQRVAPPGSRVSVHD 84 Query 68 DGEFVVATVTAHSN 81 DG V A V + Sbjct 85 DGGQVTAVVVGRVD 98 >gi|311744550|ref|ZP_07718350.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] gi|311312169|gb|EFQ82086.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] Length=119 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 48/99 (49%), Positives = 57/99 (58%), Gaps = 5/99 (5%) Query 1 VEAALAIAT-LVLVLVLCLAGVTAVS-MQVRCIDAAREAARLAARGD-VRSATDVARSIA 57 V A LA+ T L V+ LA V + QVR DAAREAAR+ ARGD V ATDVAR A Sbjct 11 VTAELAVITPFGLAFVVLLAWVVGLGHTQVRLTDAAREAARVVARGDSVADATDVARRNA 70 Query 58 PRAALVQVHRDGEFVVATVTAHSNL-LPTL-DIAARAIS 94 P A V+V G + TV A S + LP L D+ R +S Sbjct 71 PDGATVEVDEQGGLITVTVRAGSGIALPGLADVGRRELS 109 >gi|297627211|ref|YP_003688974.1| hypothetical protein PFREUD_20660 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922976|emb|CBL57558.1| Hypothetical membrane protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length=152 Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust. Identities = 31/82 (38%), Positives = 44/82 (54%), Gaps = 5/82 (6%) Query 1 VEAALAIATLVLVL---VLCLAGVTAVSMQVRCIDAAREAARLAARGDVRSATDVARSIA 57 V A LA+ L + L + C V + +Q+RC D+A + AR ARGD ++A AR+ Sbjct 46 VTAELAVGILSVALLAGIFCWV-VAVIGVQIRCGDSAAQIARQTARGD-QAAVQRARAGV 103 Query 58 PRAALVQVHRDGEFVVATVTAH 79 PR A + + G VV TV A Sbjct 104 PRDAEIDIRSSGSDVVVTVKAE 125 Lambda K H 0.325 0.131 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 130354689300 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40