BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3659c Length=352 Score E Sequences producing significant alignments: (Bits) Value gi|253800700|ref|YP_003033701.1| hypothetical protein TBMG_03699... 672 0.0 gi|15843272|ref|NP_338309.1| secretory protein, putative [Mycoba... 672 0.0 gi|167970804|ref|ZP_02553081.1| hypothetical protein MtubH3_2329... 672 0.0 gi|344221494|gb|AEN02125.1| hypothetical protein MTCTRI2_3727 [M... 669 0.0 gi|308369183|ref|ZP_07666676.1| hypothetical protein TMBG_02194 ... 669 0.0 gi|340628631|ref|YP_004747083.1| hypothetical protein MCAN_36791... 668 0.0 gi|254552770|ref|ZP_05143217.1| hypothetical protein Mtube_20362... 626 1e-177 gi|342862006|ref|ZP_08718650.1| hypothetical protein MCOL_24065 ... 575 6e-162 gi|336460808|gb|EGO39693.1| helicase/secretion neighborhood ATPa... 569 2e-160 gi|41406514|ref|NP_959350.1| hypothetical protein MAP0416 [Mycob... 568 5e-160 gi|296166714|ref|ZP_06849138.1| conjugative transfer protein Trb... 563 2e-158 gi|240173379|ref|ZP_04752037.1| hypothetical protein MkanA1_2896... 545 4e-153 gi|183985116|ref|YP_001853407.1| hypothetical protein MMAR_5147 ... 541 8e-152 gi|126437756|ref|YP_001073447.1| type II secretion system protei... 512 3e-143 gi|118619400|ref|YP_907732.1| hypothetical protein MUL_4232 [Myc... 512 4e-143 gi|108801768|ref|YP_641965.1| type II secretion system protein E... 511 7e-143 gi|254822027|ref|ZP_05227028.1| hypothetical protein MintA_18987... 509 2e-142 gi|118466310|ref|YP_879753.1| Type II/IV secretion system protei... 500 1e-139 gi|118467984|ref|YP_890390.1| type II/IV secretion system protei... 495 4e-138 gi|315446285|ref|YP_004079164.1| Flp pilus assembly protein, ATP... 484 8e-135 gi|145221976|ref|YP_001132654.1| type II secretion system protei... 480 2e-133 gi|333992581|ref|YP_004525195.1| hypothetical protein JDM601_394... 475 5e-132 gi|289759814|ref|ZP_06519192.1| type II/IV secretion system prot... 467 1e-129 gi|226303993|ref|YP_002763951.1| hypothetical protein RER_05040 ... 459 2e-127 gi|229494806|ref|ZP_04388562.1| type II secretion system protein... 457 2e-126 gi|54022323|ref|YP_116565.1| hypothetical protein nfa3590 [Nocar... 449 4e-124 gi|120406368|ref|YP_956197.1| type II secretion system protein E... 442 3e-122 gi|226363660|ref|YP_002781442.1| hypothetical protein ROP_42500 ... 438 7e-121 gi|312138010|ref|YP_004005346.1| type iv secretion system atpase... 437 9e-121 gi|111021316|ref|YP_704288.1| conjugal transfer protein [Rhodoco... 427 1e-117 gi|343926484|ref|ZP_08765989.1| hypothetical protein GOALK_060_0... 422 5e-116 gi|262200533|ref|YP_003271741.1| type II secretion system protei... 417 2e-114 gi|326383474|ref|ZP_08205161.1| type II secretion system protein... 414 9e-114 gi|256374431|ref|YP_003098091.1| type II secretion system protei... 405 5e-111 gi|257057542|ref|YP_003135374.1| Flp pilus assembly protein, ATP... 403 3e-110 gi|134096980|ref|YP_001102641.1| type II secretion system protei... 402 6e-110 gi|291006275|ref|ZP_06564248.1| type II secretion system protein... 401 7e-110 gi|333917957|ref|YP_004491538.1| Type II secretion system protei... 401 9e-110 gi|169627537|ref|YP_001701186.1| Type II secretion system protei... 398 9e-109 gi|317508890|ref|ZP_07966528.1| type II/IV secretion system prot... 390 3e-106 gi|296394991|ref|YP_003659875.1| type II secretion system protei... 378 8e-103 gi|300790609|ref|YP_003770900.1| pilus assembly protein CpaF [Am... 377 2e-102 gi|254773478|ref|ZP_05214994.1| hypothetical protein MaviaA2_022... 377 2e-102 gi|296141576|ref|YP_003648819.1| type II secretion system protei... 376 3e-102 gi|302530826|ref|ZP_07283168.1| P-type DNA transfer ATPase VirB1... 372 6e-101 gi|21221975|ref|NP_627754.1| secretory protein [Streptomyces coe... 370 1e-100 gi|289770833|ref|ZP_06530211.1| secretory protein [Streptomyces ... 370 2e-100 gi|345016207|ref|YP_004818561.1| helicase/secretion neighborhood... 369 3e-100 gi|29831149|ref|NP_825783.1| hypothetical protein SAV_4606 [Stre... 365 5e-99 gi|239989549|ref|ZP_04710213.1| putative Type II/IV secretory pr... 365 5e-99 >gi|253800700|ref|YP_003033701.1| hypothetical protein TBMG_03699 [Mycobacterium tuberculosis KZN 1435] gi|254233155|ref|ZP_04926481.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|294992921|ref|ZP_06798612.1| pilus assembly protein CpaF [Mycobacterium tuberculosis 210] 26 more sequence titles Length=387 Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/352 (100%), Positives = 352/352 (100%), Gaps = 0/352 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA Sbjct 36 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 95 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR Sbjct 96 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 155 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD Sbjct 156 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 215 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA Sbjct 216 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 275 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV Sbjct 276 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 335 Query 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSRASA 352 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSRASA Sbjct 336 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSRASA 387 >gi|15843272|ref|NP_338309.1| secretory protein, putative [Mycobacterium tuberculosis CDC1551] gi|31794829|ref|NP_857322.1| hypothetical protein Mb3683c [Mycobacterium bovis AF2122/97] gi|57117141|ref|YP_178003.1| hypothetical protein Rv3659c [Mycobacterium tuberculosis H37Rv] 37 more sequence titles Length=352 Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/352 (100%), Positives = 352/352 (100%), Gaps = 0/352 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA Sbjct 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR Sbjct 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD Sbjct 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA Sbjct 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV Sbjct 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 Query 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSRASA 352 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSRASA Sbjct 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSRASA 352 >gi|167970804|ref|ZP_02553081.1| hypothetical protein MtubH3_23295 [Mycobacterium tuberculosis H37Ra] Length=352 Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/352 (99%), Positives = 352/352 (100%), Gaps = 0/352 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA Sbjct 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR Sbjct 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRP+TQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD Sbjct 121 VLRPSTQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA Sbjct 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV Sbjct 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 Query 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSRASA 352 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSRASA Sbjct 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSRASA 352 >gi|344221494|gb|AEN02125.1| hypothetical protein MTCTRI2_3727 [Mycobacterium tuberculosis CTRI-2] Length=352 Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/352 (99%), Positives = 351/352 (99%), Gaps = 0/352 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA Sbjct 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR Sbjct 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD Sbjct 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA Sbjct 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV Sbjct 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 Query 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSRASA 352 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMS DAAALHDLLRSRASA Sbjct 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSADAAALHDLLRSRASA 352 >gi|308369183|ref|ZP_07666676.1| hypothetical protein TMBG_02194 [Mycobacterium tuberculosis SUMu002] gi|308406206|ref|ZP_07669541.1| hypothetical protein TMLG_00144 [Mycobacterium tuberculosis SUMu012] gi|308328419|gb|EFP17270.1| hypothetical protein TMBG_02194 [Mycobacterium tuberculosis SUMu002] gi|308364120|gb|EFP52971.1| hypothetical protein TMLG_00144 [Mycobacterium tuberculosis SUMu012] Length=401 Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/352 (100%), Positives = 352/352 (100%), Gaps = 0/352 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA Sbjct 50 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 109 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR Sbjct 110 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 169 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD Sbjct 170 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 229 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA Sbjct 230 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 289 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV Sbjct 290 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 349 Query 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSRASA 352 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSRASA Sbjct 350 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSRASA 401 >gi|340628631|ref|YP_004747083.1| hypothetical protein MCAN_36791 [Mycobacterium canettii CIPT 140010059] gi|340006821|emb|CCC46010.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=352 Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/352 (99%), Positives = 350/352 (99%), Gaps = 0/352 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA Sbjct 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVA QGTCLSLR Sbjct 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVAPQGTCLSLR 120 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD Sbjct 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA Sbjct 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV Sbjct 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 Query 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSRASA 352 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAA LHDLLRSRASA Sbjct 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAADLHDLLRSRASA 352 >gi|254552770|ref|ZP_05143217.1| hypothetical protein Mtube_20362 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=363 Score = 626 bits (1615), Expect = 1e-177, Method: Compositional matrix adjust. Identities = 328/328 (100%), Positives = 328/328 (100%), Gaps = 0/328 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA Sbjct 36 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 95 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR Sbjct 96 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 155 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD Sbjct 156 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 215 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA Sbjct 216 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 275 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV Sbjct 276 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 335 Query 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTV 328 ARDRAGRRRLAEIAVLRQAEGRVQAVTV Sbjct 336 ARDRAGRRRLAEIAVLRQAEGRVQAVTV 363 >gi|342862006|ref|ZP_08718650.1| hypothetical protein MCOL_24065 [Mycobacterium colombiense CECT 3035] gi|342130546|gb|EGT83855.1| hypothetical protein MCOL_24065 [Mycobacterium colombiense CECT 3035] Length=387 Score = 575 bits (1481), Expect = 6e-162, Method: Compositional matrix adjust. Identities = 303/352 (87%), Positives = 319/352 (91%), Gaps = 0/352 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 MLGDTEVLANLRVLQTELTGAGIL+PLL ADGTTDVLVTAPD+VWVDDG LRR+ IRFA Sbjct 36 MLGDTEVLANLRVLQTELTGAGILDPLLCADGTTDVLVTAPDAVWVDDGTALRRTGIRFA 95 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE+AVRRLAQRLALAAGRRLDDAQPWVDG+LTGIG GG VRLHAVLPPVA GTCLSLR Sbjct 96 DEAAVRRLAQRLALAAGRRLDDAQPWVDGELTGIGAGGLTVRLHAVLPPVAAAGTCLSLR 155 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPA+QDLAAL A GAIDPAAAALV +I+ ARLAFLV GGTGAGKTTLLAAMLGAV Sbjct 156 VLRPASQDLAALTATGAIDPAAAALVTEIIDARLAFLVSGGTGAGKTTLLAAMLGAVPAG 215 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAPRHPHLVKLVAR ANVEG+GEV VR+LVRQALRMRPDRIVVGEVRGA Sbjct 216 ERIVCVEDAAELAPRHPHLVKLVARCANVEGVGEVPVRELVRQALRMRPDRIVVGEVRGA 275 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLLAALNTGH+GGAGTVHANNPGEVPAR+EALGALGGLDRAALHSQLAAAVQVLLHV Sbjct 276 EVVDLLAALNTGHDGGAGTVHANNPGEVPARLEALGALGGLDRAALHSQLAAAVQVLLHV 335 Query 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSRASA 352 RDRAGRRRL+EIA L G+V+AVTVWHADRGM+D A L LLR R A Sbjct 336 ERDRAGRRRLSEIAALHNDHGQVRAVTVWHADRGMTDAAPRLQRLLRDRMPA 387 >gi|336460808|gb|EGO39693.1| helicase/secretion neighborhood ATPase [Mycobacterium avium subsp. paratuberculosis S397] Length=391 Score = 569 bits (1467), Expect = 2e-160, Method: Compositional matrix adjust. Identities = 306/349 (88%), Positives = 328/349 (94%), Gaps = 0/349 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 MLGDTEVLANLR LQTELTGAGILEPLL ADGTTDVLVTAPD+VWVDDGNGLRRS+IRF Sbjct 40 MLGDTEVLANLRTLQTELTGAGILEPLLCADGTTDVLVTAPDAVWVDDGNGLRRSEIRFP 99 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE+AVRRLAQRLALAAGRRLDDAQPWVDG+LTGIG GGFAVRLHAVLPPVA GTCLSLR Sbjct 100 DEAAVRRLAQRLALAAGRRLDDAQPWVDGELTGIGAGGFAVRLHAVLPPVAAAGTCLSLR 159 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPA+QDLAAL+AAGAI+PAAAALVADI+ ARLAFLV GGTGAGKTTLLAAMLGAV PD Sbjct 160 VLRPASQDLAALSAAGAIEPAAAALVADIIAARLAFLVSGGTGAGKTTLLAAMLGAVPPD 219 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAP HPHLVKLVAR ANVEG+GEV VRQLVRQALRMRPDRIVVGEVRGA Sbjct 220 ERIVCVEDAAELAPPHPHLVKLVARCANVEGVGEVPVRQLVRQALRMRPDRIVVGEVRGA 279 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLLAALNTGH+GGAGTVHANNPGEVPAR+EALGALGGLDRAALHSQLAAAVQVLLHV Sbjct 280 EVVDLLAALNTGHDGGAGTVHANNPGEVPARLEALGALGGLDRAALHSQLAAAVQVLLHV 339 Query 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSR 349 R+RAGRRRL+EIAVL++ + RV++VTVWHADRGM++ A L +L +R Sbjct 340 ERNRAGRRRLSEIAVLQRVQERVRSVTVWHADRGMTEAAPLLRRVLENR 388 >gi|41406514|ref|NP_959350.1| hypothetical protein MAP0416 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394863|gb|AAS02733.1| TrbB [Mycobacterium avium subsp. paratuberculosis K-10] Length=352 Score = 568 bits (1464), Expect = 5e-160, Method: Compositional matrix adjust. Identities = 306/349 (88%), Positives = 328/349 (94%), Gaps = 0/349 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 MLGDTEVLANLR LQTELTGAGILEPLL ADGTTDVLVTAPD+VWVDDGNGLRRS+IRF Sbjct 1 MLGDTEVLANLRTLQTELTGAGILEPLLCADGTTDVLVTAPDAVWVDDGNGLRRSEIRFP 60 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE+AVRRLAQRLALAAGRRLDDAQPWVDG+LTGIG GGFAVRLHAVLPPVA GTCLSLR Sbjct 61 DEAAVRRLAQRLALAAGRRLDDAQPWVDGELTGIGAGGFAVRLHAVLPPVAAAGTCLSLR 120 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPA+QDLAAL+AAGAI+PAAAALVADI+ ARLAFLV GGTGAGKTTLLAAMLGAV PD Sbjct 121 VLRPASQDLAALSAAGAIEPAAAALVADIIAARLAFLVSGGTGAGKTTLLAAMLGAVPPD 180 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAP HPHLVKLVAR ANVEG+GEV VRQLVRQALRMRPDRIVVGEVRGA Sbjct 181 ERIVCVEDAAELAPPHPHLVKLVARCANVEGVGEVPVRQLVRQALRMRPDRIVVGEVRGA 240 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLLAALNTGH+GGAGTVHANNPGEVPAR+EALGALGGLDRAALHSQLAAAVQVLLHV Sbjct 241 EVVDLLAALNTGHDGGAGTVHANNPGEVPARLEALGALGGLDRAALHSQLAAAVQVLLHV 300 Query 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSR 349 R+RAGRRRL+EIAVL++ + RV++VTVWHADRGM++ A L +L +R Sbjct 301 ERNRAGRRRLSEIAVLQRVQERVRSVTVWHADRGMTEAAPLLRRVLENR 349 >gi|296166714|ref|ZP_06849138.1| conjugative transfer protein TrbB [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897884|gb|EFG77466.1| conjugative transfer protein TrbB [Mycobacterium parascrofulaceum ATCC BAA-614] Length=386 Score = 563 bits (1450), Expect = 2e-158, Method: Compositional matrix adjust. Identities = 306/352 (87%), Positives = 323/352 (92%), Gaps = 1/352 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 MLGDTEVLANLRVLQ+ELTGAGILEPLL ADGTTDVLVTAPD+VWVDDGNGLRR+Q+RFA Sbjct 36 MLGDTEVLANLRVLQSELTGAGILEPLLCADGTTDVLVTAPDAVWVDDGNGLRRTQVRFA 95 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE AVRRLAQRLALAAGRRLDDAQPWVDGQL G+G G FAVRLHAVLPPVA GTCLSLR Sbjct 96 DEPAVRRLAQRLALAAGRRLDDAQPWVDGQLAGVGTG-FAVRLHAVLPPVAAAGTCLSLR 154 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPA QDLAAL A+GA+ P AAALVADIV ARLAFLVCGGTGAGKTTLLAA+LGAV+P Sbjct 155 VLRPAAQDLAALIASGAVAPEAAALVADIVAARLAFLVCGGTGAGKTTLLAALLGAVAPT 214 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAPRHPH VKLVAR ANVEG+GEV VRQLVRQALRMRPDRIVVGEVRGA Sbjct 215 ERIVCVEDAAELAPRHPHFVKLVARCANVEGVGEVAVRQLVRQALRMRPDRIVVGEVRGA 274 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLLAALNTGH+GGAGTVHAN+P EVPAR+EALGALGGLDRAALHSQLAAAV+VLLHV Sbjct 275 EVVDLLAALNTGHDGGAGTVHANSPAEVPARLEALGALGGLDRAALHSQLAAAVRVLLHV 334 Query 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSRASA 352 ARDRAGRRRL EIAVLRQ EGRV+AVTVW AD G +DDA L LL+ R A Sbjct 335 ARDRAGRRRLDEIAVLRQVEGRVRAVTVWRADGGATDDAGLLRRLLQDRMPA 386 >gi|240173379|ref|ZP_04752037.1| hypothetical protein MkanA1_28961 [Mycobacterium kansasii ATCC 12478] Length=388 Score = 545 bits (1404), Expect = 4e-153, Method: Compositional matrix adjust. Identities = 299/353 (85%), Positives = 320/353 (91%), Gaps = 1/353 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 MLGDTEVLAN+RVLQTELTGAGILEPLL AD TTDVLVTAPD+VWVDDGNGLRRS+IRF Sbjct 36 MLGDTEVLANIRVLQTELTGAGILEPLLCADATTDVLVTAPDAVWVDDGNGLRRSEIRFT 95 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE+AVRRLAQRLALAAGRRLDDAQPWVDGQL+GIG G VRLHAVLPPVA +GTCLSLR Sbjct 96 DEAAVRRLAQRLALAAGRRLDDAQPWVDGQLSGIGAAGLTVRLHAVLPPVAVEGTCLSLR 155 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRP TQDL ALAAAGAI P AA LVA I+ ARLAFLV GGTGAGKTTLLAAMLGAVS Sbjct 156 VLRPTTQDLPALAAAGAIAPQAADLVAQILAARLAFLVSGGTGAGKTTLLAAMLGAVSGA 215 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAPRHPHLVKLVAR ANVEG GEVT+RQLVRQALRMRPDRIVVGEVRGA Sbjct 216 ERIVCVEDAAELAPRHPHLVKLVARCANVEGAGEVTMRQLVRQALRMRPDRIVVGEVRGA 275 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLLAALNTGH+GGAGT+HANNPGEVP R+EALGALGGLDRAALHSQLAAAVQVLLHV Sbjct 276 EVVDLLAALNTGHDGGAGTLHANNPGEVPVRLEALGALGGLDRAALHSQLAAAVQVLLHV 335 Query 301 ARDRAGRRRLAEIAVLRQAE-GRVQAVTVWHADRGMSDDAAALHDLLRSRASA 352 RD+AGRRRL+EIA+LR+ + G V+AV WHA+ GM+D AA L LL+SR +A Sbjct 336 TRDQAGRRRLSEIAILRRTDSGLVEAVPAWHAECGMTDGAAELRSLLQSRMAA 388 >gi|183985116|ref|YP_001853407.1| hypothetical protein MMAR_5147 [Mycobacterium marinum M] gi|183178442|gb|ACC43552.1| conserved hypothetical protein [Mycobacterium marinum M] Length=389 Score = 541 bits (1393), Expect = 8e-152, Method: Compositional matrix adjust. Identities = 299/353 (85%), Positives = 316/353 (90%), Gaps = 2/353 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 MLGDTEVLANLRVLQTELTGAGILEPLL ADGTTDVLVTAPD+VWVDDGNGLRRS++RFA Sbjct 36 MLGDTEVLANLRVLQTELTGAGILEPLLCADGTTDVLVTAPDAVWVDDGNGLRRSEVRFA 95 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE+AVRRLAQRLALAAGRRLDDAQPWVDG L GIG GG VRLHAVLPPVA GTCLSLR Sbjct 96 DEAAVRRLAQRLALAAGRRLDDAQPWVDGHLGGIGTGGLTVRLHAVLPPVAAAGTCLSLR 155 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRP T DLAAL A+GAI AA LV +I+ ARLAFLVCGGTGAGKTTLLAAMLGAV+ Sbjct 156 VLRPTTVDLAALIASGAIAEQAAELVGEILAARLAFLVCGGTGAGKTTLLAAMLGAVAGS 215 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAPRHPHLVKLVAR ANVEG GEVT+RQLVRQALRMRPDRIVVGEVRGA Sbjct 216 ERIVCVEDAAELAPRHPHLVKLVARCANVEGAGEVTLRQLVRQALRMRPDRIVVGEVRGA 275 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLLAALNTGHEGGAGTVHAN+PGEVPAR+EALGALGGLDRAALHSQLAAAVQVLLHV Sbjct 276 EVVDLLAALNTGHEGGAGTVHANSPGEVPARLEALGALGGLDRAALHSQLAAAVQVLLHV 335 Query 301 ARDRAGRRRLAEIAVLRQAE-GRVQAVTVWHADRGMSDDAAA-LHDLLRSRAS 351 RD+ GRRRL+EIAVL +AE G V A+T WHADRGM+ D A L LL R + Sbjct 336 TRDQGGRRRLSEIAVLHRAEDGLVAALTAWHADRGMAQDGGAVLRGLLSGRGT 388 >gi|126437756|ref|YP_001073447.1| type II secretion system protein E [Mycobacterium sp. JLS] gi|126237556|gb|ABO00957.1| type II secretion system protein E [Mycobacterium sp. JLS] Length=388 Score = 512 bits (1319), Expect = 3e-143, Method: Compositional matrix adjust. Identities = 280/350 (80%), Positives = 304/350 (87%), Gaps = 1/350 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGDTEVL NLR LQTELTGAG LEPLL ADGTTDVLVTAPD+VW+DDG GLRR+ +RFA Sbjct 36 VLGDTEVLTNLRALQTELTGAGPLEPLLCADGTTDVLVTAPDAVWIDDGKGLRRTTVRFA 95 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE AVRRLAQRLALAAGRRLD+AQPWVDGQL G+G GGF VRLHAVLPPVA GTCLSLR Sbjct 96 DEGAVRRLAQRLALAAGRRLDEAQPWVDGQLHGLGAGGFTVRLHAVLPPVAAAGTCLSLR 155 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPATQDLAAL AAG I A+AL+ D++ ARLAFLV GGTGAGKTTLLAA LGAV+ Sbjct 156 VLRPATQDLAALVAAGTIADEASALLRDVIDARLAFLVSGGTGAGKTTLLAAALGAVAGQ 215 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAP+HPH+VKLVAR ANVEG+GEVTVR LVRQALRMRPDRIVVGEVRGA Sbjct 216 ERIVCVEDAAELAPQHPHVVKLVARGANVEGVGEVTVRDLVRQALRMRPDRIVVGEVRGA 275 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLLAALNTGH+GGAGTVHAN+P EVPARMEALGA+GGL RAALHSQLAAAVQVLLHV Sbjct 276 EVVDLLAALNTGHDGGAGTVHANSPAEVPARMEALGAVGGLSRAALHSQLAAAVQVLLHV 335 Query 301 ARDRAGRRRLAEIAVLR-QAEGRVQAVTVWHADRGMSDDAAALHDLLRSR 349 ARDR G RRL +IA+L+ +GRV+ V W DRG AA L L+ SR Sbjct 336 ARDRTGARRLTQIALLQPHDDGRVRVVPAWQIDRGFDAGAADLRRLVSSR 385 >gi|118619400|ref|YP_907732.1| hypothetical protein MUL_4232 [Mycobacterium ulcerans Agy99] gi|118571510|gb|ABL06261.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=389 Score = 512 bits (1318), Expect = 4e-143, Method: Compositional matrix adjust. Identities = 295/353 (84%), Positives = 313/353 (89%), Gaps = 2/353 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 MLGDTEVLANLRVLQTELTGAGILEPLL ADGTTDVLV APD+VWVDDGNGLRRS++RFA Sbjct 36 MLGDTEVLANLRVLQTELTGAGILEPLLCADGTTDVLVIAPDAVWVDDGNGLRRSEVRFA 95 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE+AVRRLAQRLALAAGRRLDDAQPWVDG L GIG GG VRLHAVLPPVA GTCLSLR Sbjct 96 DEAAVRRLAQRLALAAGRRLDDAQPWVDGHLGGIGTGGLTVRLHAVLPPVAAAGTCLSLR 155 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRP T DLAAL AAGAI AA LV +I+ ARLAFLVCGGTG GKTTLLAAMLGAV+ Sbjct 156 VLRPTTVDLAALIAAGAIAEQAAELVGEILAARLAFLVCGGTGPGKTTLLAAMLGAVAGS 215 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAPRHPHLVKLVAR ANVEG G+VT+RQLVRQALR+RPDRIVVGEVRGA Sbjct 216 ERIVCVEDAAELAPRHPHLVKLVARCANVEGAGKVTLRQLVRQALRVRPDRIVVGEVRGA 275 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 VVDLLAALNTGHEGGAGTVHAN+PGEVPAR+EALGALGGLDRAALHSQLAAAVQVLLHV Sbjct 276 GVVDLLAALNTGHEGGAGTVHANSPGEVPARLEALGALGGLDRAALHSQLAAAVQVLLHV 335 Query 301 ARDRAGRRRLAEIAVLRQAE-GRVQAVTVWHADRGMSDDAAA-LHDLLRSRAS 351 RD+ GRRRL+EIAVL +AE G V A+T WHADRGM+ D A L LL R + Sbjct 336 TRDQGGRRRLSEIAVLHRAEDGLVAALTAWHADRGMAQDGGAVLRGLLSGRGT 388 >gi|108801768|ref|YP_641965.1| type II secretion system protein E [Mycobacterium sp. MCS] gi|119870919|ref|YP_940871.1| type II secretion system protein E [Mycobacterium sp. KMS] gi|108772187|gb|ABG10909.1| type II secretion system protein E [Mycobacterium sp. MCS] gi|119697008|gb|ABL94081.1| type II secretion system protein E [Mycobacterium sp. KMS] Length=388 Score = 511 bits (1316), Expect = 7e-143, Method: Compositional matrix adjust. Identities = 280/350 (80%), Positives = 303/350 (87%), Gaps = 1/350 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGDTEVL NLR LQTELTGAG LEPLL ADGTTDVLVTAPD+VW+DDG GLRR+ +RFA Sbjct 36 VLGDTEVLTNLRALQTELTGAGPLEPLLCADGTTDVLVTAPDAVWIDDGKGLRRTTVRFA 95 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE AVRRLAQRLALAAGRRLD+AQPWVDGQL G+G GGF VRLHAVLPPVA GTCLSLR Sbjct 96 DEGAVRRLAQRLALAAGRRLDEAQPWVDGQLHGLGAGGFTVRLHAVLPPVAAAGTCLSLR 155 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPATQDL AL AAG I A+AL+ D++ ARLAFLV GGTGAGKTTLLAA LGAV+ D Sbjct 156 VLRPATQDLPALVAAGTIVEDASALLRDVIDARLAFLVSGGTGAGKTTLLAAALGAVAGD 215 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAP+HPH+VKLVAR ANVEG+GEVTVR LVRQALRMRPDRIVVGEVRGA Sbjct 216 ERIVCVEDAAELAPQHPHVVKLVARGANVEGVGEVTVRDLVRQALRMRPDRIVVGEVRGA 275 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLLAALNTGH+GGAGTVHANNP EVPARMEALGA+GGL+R ALHSQLAAAVQVLLHV Sbjct 276 EVVDLLAALNTGHDGGAGTVHANNPAEVPARMEALGAVGGLNRGALHSQLAAAVQVLLHV 335 Query 301 ARDRAGRRRLAEIAVLR-QAEGRVQAVTVWHADRGMSDDAAALHDLLRSR 349 ARDR G RRL +IAVL+ +G V+ V W DRG AA L L+ SR Sbjct 336 ARDRTGARRLTQIAVLQPHDDGCVRVVPAWQIDRGFDAGAADLRRLVSSR 385 >gi|254822027|ref|ZP_05227028.1| hypothetical protein MintA_18987 [Mycobacterium intracellulare ATCC 13950] Length=348 Score = 509 bits (1312), Expect = 2e-142, Method: Compositional matrix adjust. Identities = 277/349 (80%), Positives = 290/349 (84%), Gaps = 36/349 (10%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 MLGDTEVLANLRVLQTELTGAGILEPLL ADGTTDVLVTAPD+VWVDDGNGLRR+ IRF Sbjct 36 MLGDTEVLANLRVLQTELTGAGILEPLLCADGTTDVLVTAPDAVWVDDGNGLRRTGIRFP 95 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE AVRLHAVLPPVA GTCLSLR Sbjct 96 DEP------------------------------------AVRLHAVLPPVAAAGTCLSLR 119 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPA+QDLAAL AAGAIDP AAALVADI+ ARLAFLV GGTGAGKTTLLAAMLGAV P Sbjct 120 VLRPASQDLAALTAAGAIDPVAAALVADIIGARLAFLVSGGTGAGKTTLLAAMLGAVPPA 179 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAPRHPHLVKLVAR ANVEGIGEV VRQLVRQALRMRPDRIVVGEVRGA Sbjct 180 ERIVCVEDAAELAPRHPHLVKLVARCANVEGIGEVPVRQLVRQALRMRPDRIVVGEVRGA 239 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLLAALNTGHEGGAGTVHAN+PGEVPAR+EALGALGGLDRAALHSQLAAAVQVLLHV Sbjct 240 EVVDLLAALNTGHEGGAGTVHANSPGEVPARLEALGALGGLDRAALHSQLAAAVQVLLHV 299 Query 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSR 349 RDR GRRRL EIAVL+ +G+V+AVTVWHADRGM+DDA L +L+SR Sbjct 300 ERDRTGRRRLGEIAVLQPVQGQVRAVTVWHADRGMTDDAPQLRRVLQSR 348 >gi|118466310|ref|YP_879753.1| Type II/IV secretion system protein [Mycobacterium avium 104] gi|118167597|gb|ABK68494.1| Type II/IV secretion system protein [Mycobacterium avium 104] Length=362 Score = 500 bits (1287), Expect = 1e-139, Method: Compositional matrix adjust. Identities = 270/294 (92%), Positives = 282/294 (96%), Gaps = 0/294 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 MLGDTEVLANLR LQTELTGAGILEPLL ADGTTDVLVTAPD+VWVDDGNGLRRS+IRF Sbjct 40 MLGDTEVLANLRTLQTELTGAGILEPLLCADGTTDVLVTAPDAVWVDDGNGLRRSEIRFP 99 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE+AVRRLAQRLALAAGRRLDDAQPWVDG+LTGIG GGFAVRLHAVLPPVA GTCLSLR Sbjct 100 DEAAVRRLAQRLALAAGRRLDDAQPWVDGELTGIGAGGFAVRLHAVLPPVAAAGTCLSLR 159 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPA+QDLAAL+AAGAI+PAAAALVADI+ ARLAFLV GGTGAGKTTLLAA+LGAV PD Sbjct 160 VLRPASQDLAALSAAGAIEPAAAALVADIIAARLAFLVSGGTGAGKTTLLAAILGAVPPD 219 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAP HPHLVKLVAR ANVEG+GEV VRQLVRQALRMRPDRIVVGEVRGA Sbjct 220 ERIVCVEDAAELAPPHPHLVKLVARCANVEGVGEVPVRQLVRQALRMRPDRIVVGEVRGA 279 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAV 294 EVVDLLAALNTGH+GGAGTVHANNPGEVPAR+EALGALGGLDRAALHSQLAAAV Sbjct 280 EVVDLLAALNTGHDGGAGTVHANNPGEVPARLEALGALGGLDRAALHSQLAAAV 333 >gi|118467984|ref|YP_890390.1| type II/IV secretion system protein [Mycobacterium smegmatis str. MC2 155] gi|118169271|gb|ABK70167.1| type II/IV secretion system protein [Mycobacterium smegmatis str. MC2 155] Length=385 Score = 495 bits (1275), Expect = 4e-138, Method: Compositional matrix adjust. Identities = 259/335 (78%), Positives = 291/335 (87%), Gaps = 2/335 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGDTEVL+NLR L TELTGAG+LEPLL ADGTTDVLVTAPD+VWVD G+GLRR+ IRF Sbjct 36 LLGDTEVLSNLRALDTELTGAGVLEPLLRADGTTDVLVTAPDAVWVDAGHGLRRTDIRFP 95 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE+AVRRLAQRLAL AGRRLD+AQPWVDG L G+G F VRLHAVLPP+A GTCLSLR Sbjct 96 DEAAVRRLAQRLALLAGRRLDEAQPWVDGHLGGMGP--FTVRLHAVLPPIAAAGTCLSLR 153 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPATQ+L +LA +GAI PAA L+ ++ ARLAFL+ GGTGAGKTTLL+A+LG V Sbjct 154 VLRPATQNLDSLARSGAIAPAAVDLLRRVIDARLAFLISGGTGAGKTTLLSALLGTVPGH 213 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAP+HPH+V+LVAR ANVEG+GE+TVR LVRQALRMRPDRIVVGEVRGA Sbjct 214 ERIVCVEDAAELAPQHPHVVRLVARNANVEGVGEITVRDLVRQALRMRPDRIVVGEVRGA 273 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLLAALNTGH+GGAGTVHAN+P EVPAR+EALGALGGLDR AL SQ AAAVQVLLHV Sbjct 274 EVVDLLAALNTGHDGGAGTVHANSPAEVPARLEALGALGGLDRYALSSQAAAAVQVLLHV 333 Query 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGM 335 R AGRRRL+EIAVLR+ E ++ T WHAD G+ Sbjct 334 DRGLAGRRRLSEIAVLRRHESGLEVATAWHADAGL 368 >gi|315446285|ref|YP_004079164.1| Flp pilus assembly protein, ATPase CpaF [Mycobacterium sp. Spyr1] gi|315264588|gb|ADU01330.1| Flp pilus assembly protein, ATPase CpaF [Mycobacterium sp. Spyr1] Length=389 Score = 484 bits (1247), Expect = 8e-135, Method: Compositional matrix adjust. Identities = 268/351 (77%), Positives = 292/351 (84%), Gaps = 2/351 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGD EVL +LR LQTELTGAG L+PLLSA GTTDVLVTAPD+VW+DDG GLRR+ +RFA Sbjct 36 VLGDAEVLRSLRELQTELTGAGALDPLLSAPGTTDVLVTAPDAVWIDDGRGLRRTSVRFA 95 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGG-FAVRLHAVLPPVATQGTCLSL 119 DE+AVRRLAQRLAL AGRRLD+AQPWVDG L G GG VRLHAVLPPVA GTCLSL Sbjct 96 DEAAVRRLAQRLALTAGRRLDEAQPWVDGHLLAPGPGGQLTVRLHAVLPPVAAAGTCLSL 155 Query 120 RVLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSP 179 RVLRPA Q+L AL AAG + P AA L+ DI+ ARLAF+V GGTGAGKTTLLAA+L AV Sbjct 156 RVLRPANQNLDALTAAGTLTPEAAGLLRDILAARLAFVVSGGTGAGKTTLLAALLAAVPH 215 Query 180 DERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRG 239 ERIVCVEDAAELAP HPHLVKLVAR ANVEG GEVTVR LVRQALRMRPDRIV+GEVRG Sbjct 216 TERIVCVEDAAELAPDHPHLVKLVARGANVEGAGEVTVRDLVRQALRMRPDRIVIGEVRG 275 Query 240 AEVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLH 299 EVVDLL+ALNTGH+GGAGTVHAN+P EVPAR EAL ALGGLDRAALHSQLAAA+QV+LH Sbjct 276 PEVVDLLSALNTGHDGGAGTVHANSPAEVPARFEALAALGGLDRAALHSQLAAAIQVVLH 335 Query 300 VARDRAGRRRLAEIAVLRQAE-GRVQAVTVWHADRGMSDDAAALHDLLRSR 349 VARDRAGRR LAEI +L +AE G V V WH D G A L LLR+R Sbjct 336 VARDRAGRRHLAEIGLLYRAEGGSVDVVRCWHRDDGFGPGAGQLRALLRAR 386 >gi|145221976|ref|YP_001132654.1| type II secretion system protein E [Mycobacterium gilvum PYR-GCK] gi|145214462|gb|ABP43866.1| type II secretion system protein E [Mycobacterium gilvum PYR-GCK] Length=389 Score = 480 bits (1235), Expect = 2e-133, Method: Compositional matrix adjust. Identities = 266/351 (76%), Positives = 290/351 (83%), Gaps = 2/351 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGD EVL +LR LQTELTGAG L+PLLSA GTTDVLVTAPD+VW+DDG GLRR+ +RFA Sbjct 36 VLGDAEVLRSLRELQTELTGAGALDPLLSAPGTTDVLVTAPDAVWIDDGRGLRRTSVRFA 95 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGG-FAVRLHAVLPPVATQGTCLSL 119 DE+AVRRLAQRLAL AGRRLD+AQPWVDG L G GG VRLHAVLPPVA GTCLSL Sbjct 96 DEAAVRRLAQRLALTAGRRLDEAQPWVDGHLLAPGPGGQLTVRLHAVLPPVAAAGTCLSL 155 Query 120 RVLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSP 179 RVLRPA Q+L AL +AG + P AA L+ DI+ ARLAF+V GGTGAGKTTLLAA+L AV Sbjct 156 RVLRPANQNLDALTSAGTLTPEAAGLLRDILAARLAFVVSGGTGAGKTTLLAALLAAVPH 215 Query 180 DERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRG 239 ERIVCVEDAAELAP HPHLVKLVAR ANVEG GEVTVR LVRQALRMRPDRIV+GEVRG Sbjct 216 TERIVCVEDAAELAPDHPHLVKLVARGANVEGAGEVTVRDLVRQALRMRPDRIVIGEVRG 275 Query 240 AEVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLH 299 EVVDLL+ALNTGH+GGAGTVHAN+P EVPAR EAL ALGGLDRAALHSQLAAA+QV+LH Sbjct 276 PEVVDLLSALNTGHDGGAGTVHANSPAEVPARFEALAALGGLDRAALHSQLAAAIQVVLH 335 Query 300 VARDRAGRRRLAEIAVL-RQAEGRVQAVTVWHADRGMSDDAAALHDLLRSR 349 VARDRAGRR LAEI +L R G V V WH D G A L LLR+R Sbjct 336 VARDRAGRRHLAEIGLLYRAGGGSVDVVRCWHRDDGFGRGAGELRALLRAR 386 >gi|333992581|ref|YP_004525195.1| hypothetical protein JDM601_3941 [Mycobacterium sp. JDM601] gi|333488549|gb|AEF37941.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=391 Score = 475 bits (1223), Expect = 5e-132, Method: Compositional matrix adjust. Identities = 278/353 (79%), Positives = 304/353 (87%), Gaps = 1/353 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGDTE+L+NLR LQTELTGAGILEPLL A TTDVLVTAPD+VWVDDG GLRR+ IRFA Sbjct 39 VLGDTEMLSNLRTLQTELTGAGILEPLLCAADTTDVLVTAPDAVWVDDGAGLRRTDIRFA 98 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE+AVRRLAQRLA AAGRRLDDAQPWVDG+L GIG G F VRLHA+LPPVA GTCLSLR Sbjct 99 DEAAVRRLAQRLAAAAGRRLDDAQPWVDGRLGGIGTGEFTVRLHAMLPPVAADGTCLSLR 158 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPATQD+AALAAAG I AA AL+ADIV ARLAFLV GGTGAGKTTLL+AMLGAV P Sbjct 159 VLRPATQDIAALAAAGGIARAAVALLADIVDARLAFLVSGGTGAGKTTLLSAMLGAVHPR 218 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ER+VCVEDA EL PRHPHLV+LVAR ANVEG GEV +R LVRQALRMRPDR+VVGEVRGA Sbjct 219 ERLVCVEDAPELQPRHPHLVRLVARAANVEGAGEVGLRDLVRQALRMRPDRLVVGEVRGA 278 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLLAALNTGH+GGAGTVHAN+P EVPAR+EAL ALGGLDRA LHSQLAAAVQVLLHV Sbjct 279 EVVDLLAALNTGHDGGAGTVHANSPAEVPARLEALAALGGLDRAGLHSQLAAAVQVLLHV 338 Query 301 ARDRAGRRRLAEIAVLRQAE-GRVQAVTVWHADRGMSDDAAALHDLLRSRASA 352 R+R G+RRL +I+VLR+ + G VQA VW DRG+S+ A LLR R A Sbjct 339 GRERGGKRRLTDISVLRRTDTGLVQAAPVWQVDRGLSEHVAEFRALLRERTPA 391 >gi|289759814|ref|ZP_06519192.1| type II/IV secretion system protein [Mycobacterium tuberculosis T85] gi|289715378|gb|EFD79390.1| type II/IV secretion system protein [Mycobacterium tuberculosis T85] Length=277 Score = 467 bits (1202), Expect = 1e-129, Method: Compositional matrix adjust. Identities = 242/242 (100%), Positives = 242/242 (100%), Gaps = 0/242 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA Sbjct 36 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 95 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR Sbjct 96 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 155 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD Sbjct 156 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 215 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA Sbjct 216 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 275 Query 241 EV 242 EV Sbjct 276 EV 277 >gi|226303993|ref|YP_002763951.1| hypothetical protein RER_05040 [Rhodococcus erythropolis PR4] gi|226183108|dbj|BAH31212.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=393 Score = 459 bits (1182), Expect = 2e-127, Method: Compositional matrix adjust. Identities = 244/330 (74%), Positives = 273/330 (83%), Gaps = 1/330 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +L DT++L +RVLQTELTGAG LEPLL G DVLVTAPD VWVD G GL RS +RF Sbjct 41 VLADTDLLEVVRVLQTELTGAGPLEPLLHEPGVADVLVTAPDQVWVDRGVGLERSGVRFT 100 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE+AVRRLAQRLAL+AGRRLDDAQPWVDG+L G+G G F VRLHAVL PVA GTC+SLR Sbjct 101 DEAAVRRLAQRLALSAGRRLDDAQPWVDGRLRGVGDGHFGVRLHAVLAPVAQGGTCVSLR 160 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPATQ L AL A GA++P A L+ I++ RLAFLV GGTGAGKTTLL+AMLGAV P Sbjct 161 VLRPATQGLDALCAHGAVEPDARELLDHIISCRLAFLVIGGTGAGKTTLLSAMLGAVDPR 220 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAP HPH+V+LVAR NVEG+GEVTVR LVRQALRMRPDRIVVGEVRGA Sbjct 221 ERIVCVEDAAELAPPHPHVVRLVARAPNVEGVGEVTVRDLVRQALRMRPDRIVVGEVRGA 280 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EV DLL A+NTGH+GGAGTVHAN+P EVPAR+EAL ALGG+DR ALHSQLAAAVQV+LHV Sbjct 281 EVTDLLTAMNTGHDGGAGTVHANSPEEVPARLEALAALGGMDRHALHSQLAAAVQVILHV 340 Query 301 ARDRAGRRRLAEIAVL-RQAEGRVQAVTVW 329 R G RRL +I V+ R A+G VQ + W Sbjct 341 HRSADGSRRLEQIGVIDRGADGYVQIMQAW 370 >gi|229494806|ref|ZP_04388562.1| type II secretion system protein E [Rhodococcus erythropolis SK121] gi|229318302|gb|EEN84167.1| type II secretion system protein E [Rhodococcus erythropolis SK121] Length=393 Score = 457 bits (1175), Expect = 2e-126, Method: Compositional matrix adjust. Identities = 243/330 (74%), Positives = 274/330 (84%), Gaps = 1/330 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +L DT++L +RVLQTELTGAG LEPLL G DVLVTAPD VWVD G GL RS +RF Sbjct 41 VLADTDLLEVVRVLQTELTGAGPLEPLLHEPGVADVLVTAPDQVWVDRGVGLERSGVRFT 100 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE+AVRRLAQRLAL+AGRRLDDAQPWVDG+L G+G G F VRLHAVL PVA GTC+SLR Sbjct 101 DEAAVRRLAQRLALSAGRRLDDAQPWVDGRLRGVGDGHFGVRLHAVLAPVAQGGTCVSLR 160 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPATQ L AL+A GA++P A L+ I++ RLAFLV GGTGAGKTTLL+AMLGAV P Sbjct 161 VLRPATQGLDALSAHGAVEPDARELLNRIISCRLAFLVIGGTGAGKTTLLSAMLGAVDPR 220 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAP HPH+V+LVAR NVEG+GEVTVR LVRQALRMRPDRIVVGEVRGA Sbjct 221 ERIVCVEDAAELAPPHPHVVRLVARAPNVEGVGEVTVRDLVRQALRMRPDRIVVGEVRGA 280 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EV DLL A+NTGH+GGAGTVHAN+P EVPAR+EAL ALGG+DR ALHSQLAAAVQV+LHV Sbjct 281 EVTDLLTAMNTGHDGGAGTVHANSPEEVPARLEALAALGGMDRHALHSQLAAAVQVILHV 340 Query 301 ARDRAGRRRLAEIAVL-RQAEGRVQAVTVW 329 R G RRL +I V+ R A+G V+ + W Sbjct 341 HRLADGSRRLEQIGVIDRGADGYVRIMQAW 370 >gi|54022323|ref|YP_116565.1| hypothetical protein nfa3590 [Nocardia farcinica IFM 10152] gi|54013831|dbj|BAD55201.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=395 Score = 449 bits (1154), Expect = 4e-124, Method: Compositional matrix adjust. Identities = 248/354 (71%), Positives = 279/354 (79%), Gaps = 4/354 (1%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGDT++L LR+LQTELTGAG+LEPLL DVLVTAPD+VWVD G GL ++ I F Sbjct 40 VLGDTDLLRALRLLQTELTGAGLLEPLLHDPRVADVLVTAPDAVWVDRGRGLEKTAITFP 99 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVG---GFAVRLHAVLPPVATQGTCL 117 DE+AVRRLAQRLAL+AGRRLDDAQPWVDG+L G G F VRLHAVL P+A GTCL Sbjct 100 DEAAVRRLAQRLALSAGRRLDDAQPWVDGKLAGPGSTLGESFGVRLHAVLAPIAHDGTCL 159 Query 118 SLRVLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAV 177 SLRVLRPATQ L ALAA+GA+ +A L+ IV ARLA LV GGTGAGKTTLL+ +L V Sbjct 160 SLRVLRPATQGLDALAASGAVPASAKTLLEKIVRARLALLVVGGTGAGKTTLLSGLLATV 219 Query 178 SPDERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEV 237 P ERIVCVEDAAELAP HPH+V+LVAR ANVEG+GEVTVR LVRQALRMRPDRIVVGEV Sbjct 220 DPAERIVCVEDAAELAPPHPHVVRLVARTANVEGVGEVTVRDLVRQALRMRPDRIVVGEV 279 Query 238 RGAEVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVL 297 RGAEVVDLL ALNTGH+GGAGTVHAN+P EVPAR+EAL ALGG+ RAALHSQLAAAVQV+ Sbjct 280 RGAEVVDLLTALNTGHDGGAGTVHANSPREVPARLEALAALGGMTRAALHSQLAAAVQVV 339 Query 298 LHVARDRAGRRRLAEIAVLRQA-EGRVQAVTVWHADRGMSDDAAALHDLLRSRA 350 LHV R G R L EI +L A +GRV V W AD G + A L +L R+ Sbjct 340 LHVQRGADGSRGLREIGLLEPAHDGRVHIVAAWRADGGPAPAAPRLAELFAERS 393 >gi|120406368|ref|YP_956197.1| type II secretion system protein E [Mycobacterium vanbaalenii PYR-1] gi|119959186|gb|ABM16191.1| type II secretion system protein E [Mycobacterium vanbaalenii PYR-1] Length=398 Score = 442 bits (1138), Expect = 3e-122, Method: Compositional matrix adjust. Identities = 238/298 (80%), Positives = 259/298 (87%), Gaps = 4/298 (1%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGD EVL NLR LQTEL GAGIL+PLLS G TDVLVTAPD+VWVDDGNGLRR+ +RFA Sbjct 36 VLGDAEVLTNLRELQTELIGAGILDPLLSGPGVTDVLVTAPDAVWVDDGNGLRRTSVRFA 95 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGG----FAVRLHAVLPPVATQGTC 116 D++AVRRLAQRLAL AGRRLD+AQPWVDG L+G G G +VRLHAVLPPVA GTC Sbjct 96 DDAAVRRLAQRLALTAGRRLDEAQPWVDGNLSGFGAGQPGGPLSVRLHAVLPPVAAGGTC 155 Query 117 LSLRVLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGA 176 LSLRVLRPA QDL AL AGAI+P AA ++ D+++ARLAF+V GGTGAGKTTLLAA+L A Sbjct 156 LSLRVLRPANQDLDALIGAGAIEPDAAGILRDVISARLAFVVSGGTGAGKTTLLAALLAA 215 Query 177 VSPDERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGE 236 V DERIVCVEDAAELAP HPHLVKLVAR ANVEG GEVTVR LVRQALRMRPDRIV+GE Sbjct 216 VPEDERIVCVEDAAELAPDHPHLVKLVARCANVEGAGEVTVRDLVRQALRMRPDRIVIGE 275 Query 237 VRGAEVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAV 294 VRGAEVVDLL ALNTGH+GGAGTVHANNP EVPAR EAL ALGGLDRAALHSQLAAA+ Sbjct 276 VRGAEVVDLLTALNTGHDGGAGTVHANNPAEVPARFEALAALGGLDRAALHSQLAAAI 333 >gi|226363660|ref|YP_002781442.1| hypothetical protein ROP_42500 [Rhodococcus opacus B4] gi|226242149|dbj|BAH52497.1| hypothetical protein [Rhodococcus opacus B4] Length=399 Score = 438 bits (1126), Expect = 7e-121, Method: Compositional matrix adjust. Identities = 248/335 (75%), Positives = 273/335 (82%), Gaps = 1/335 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGDT++L LRVL TELTGAG LE LL+ G DVLVTAPD VWVD G GL R+ +RF Sbjct 40 VLGDTDLLGALRVLMTELTGAGPLESLLTEPGVADVLVTAPDRVWVDRGRGLERAAVRFT 99 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE+AVRRLAQRLAL+AGRRLDDAQPWVDG+L +G G F VRLHAVL PVA GTCLSLR Sbjct 100 DEAAVRRLAQRLALSAGRRLDDAQPWVDGRLRDVGNGSFGVRLHAVLAPVAQGGTCLSLR 159 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPATQ L AL A GA+ +A L+ IV ARLAFLV GGTGAGKTTLLAA+LGAV P Sbjct 160 VLRPATQGLGALVAGGAVTGSAHDLLVKIVHARLAFLVTGGTGAGKTTLLAALLGAVDPA 219 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAP HPH+V+LVAR NVEG+GEVTVR LVRQ+LRMRPDRIVVGEVRGA Sbjct 220 ERIVCVEDAAELAPTHPHVVRLVARAPNVEGVGEVTVRDLVRQSLRMRPDRIVVGEVRGA 279 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLL ALNTGH+GGAGTVHAN+P EVPAR+EAL ALGG+DRAALHSQLAAAVQV+LHV Sbjct 280 EVVDLLTALNTGHDGGAGTVHANSPEEVPARLEALAALGGMDRAALHSQLAAAVQVILHV 339 Query 301 ARDRAGRRRLAEI-AVLRQAEGRVQAVTVWHADRG 334 R +G RRL +I AV R G V V W D G Sbjct 340 HRSSSGVRRLTQIGAVTRDDRGHVTIVPAWSHDTG 374 >gi|312138010|ref|YP_004005346.1| type iv secretion system atpase subunit [Rhodococcus equi 103S] gi|325675227|ref|ZP_08154912.1| pilus assembly protein CpaF [Rhodococcus equi ATCC 33707] gi|311887349|emb|CBH46660.1| putative type IV secretion system ATPase subunit [Rhodococcus equi 103S] gi|325553933|gb|EGD23610.1| pilus assembly protein CpaF [Rhodococcus equi ATCC 33707] Length=392 Score = 437 bits (1125), Expect = 9e-121, Method: Compositional matrix adjust. Identities = 254/353 (72%), Positives = 284/353 (81%), Gaps = 1/353 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGDT++LA LRVLQTELTGAG LE LL+ G TDVLVTAPD+VWVD G GL R + FA Sbjct 40 VLGDTDLLAALRVLQTELTGAGPLEALLAQPGVTDVLVTAPDAVWVDRGAGLERVDVTFA 99 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE+AVRRLAQRLAL+AGRRLDDAQPWVDG+L G G VRLHAVL PVA GTCLSLR Sbjct 100 DEAAVRRLAQRLALSAGRRLDDAQPWVDGRLPAAGGGDLGVRLHAVLAPVAQAGTCLSLR 159 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLR ATQ LAA+GA+ A +L+ IV ARLAFLV GGTGAGKTT+LAA+LG V P Sbjct 160 VLRQATQGFDDLAASGALPGDARSLLERIVRARLAFLVTGGTGAGKTTMLAALLGRVDPG 219 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAP HPH+V+LVAR ANVEG+G VTVR LVRQ+LRMRPDRIVVGEVRGA Sbjct 220 ERIVCVEDAAELAPAHPHVVRLVARVANVEGVGAVTVRDLVRQSLRMRPDRIVVGEVRGA 279 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLL ALNTGH+GGAGTVHAN+P E+PAR+EAL ALGGLDRAALHSQLAAAVQV+LHV Sbjct 280 EVVDLLTALNTGHDGGAGTVHANSPRELPARLEALAALGGLDRAALHSQLAAAVQVVLHV 339 Query 301 ARDRAGRRRLAEIAVLRQAE-GRVQAVTVWHADRGMSDDAAALHDLLRSRASA 352 RD +GRRRLAEIAVLR+ G V+ V W G+ L D+L R + Sbjct 340 ERDTSGRRRLAEIAVLRRDPVGTVEVVPAWTFGGGVHAAGKVLQDMLLRRGES 392 >gi|111021316|ref|YP_704288.1| conjugal transfer protein [Rhodococcus jostii RHA1] gi|110820846|gb|ABG96130.1| probable conjugal transfer protein [Rhodococcus jostii RHA1] Length=400 Score = 427 bits (1097), Expect = 1e-117, Method: Compositional matrix adjust. Identities = 253/350 (73%), Positives = 279/350 (80%), Gaps = 1/350 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGDT++L LRVL TELTGAG LE LL+ G DVLVTAPD VWVD G GL R+ +RF Sbjct 40 VLGDTDLLGALRVLMTELTGAGPLESLLTEPGVADVLVTAPDRVWVDRGRGLERAAVRFT 99 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE+AVRRLAQRLAL+AGRRLDDAQPWVDG+L +G G F VRLHAVL PVA GTCLSLR Sbjct 100 DEAAVRRLAQRLALSAGRRLDDAQPWVDGRLRDVGNGSFGVRLHAVLAPVAQGGTCLSLR 159 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPATQ L AL A GA+ AA L+ IV ARLAFLV GGTGAGKTTLLAA+LGAV P Sbjct 160 VLRPATQGLGALVAGGAVAAAAHDLLMTIVQARLAFLVTGGTGAGKTTLLAALLGAVDPA 219 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAP HPH+V+LVAR NVEG+GEVTVR LVRQ+LRMRPDRIVVGEVRGA Sbjct 220 ERIVCVEDAAELAPTHPHVVRLVARAPNVEGVGEVTVRDLVRQSLRMRPDRIVVGEVRGA 279 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLL ALNTGH+GGAGTVHAN+P EVPAR+EAL ALGG+DRAALHSQLAAAVQV+LHV Sbjct 280 EVVDLLTALNTGHDGGAGTVHANSPEEVPARLEALAALGGMDRAALHSQLAAAVQVVLHV 339 Query 301 ARDRAGRRRLAEIAVL-RQAEGRVQAVTVWHADRGMSDDAAALHDLLRSR 349 R +G RRL +I V+ R GRV V W+ D G A L L R Sbjct 340 HRSSSGARRLTQIGVVTRDEHGRVTIVPAWNHDTGEGPAADRLRHLCSRR 389 >gi|343926484|ref|ZP_08765989.1| hypothetical protein GOALK_060_01480 [Gordonia alkanivorans NBRC 16433] gi|343763722|dbj|GAA12915.1| hypothetical protein GOALK_060_01480 [Gordonia alkanivorans NBRC 16433] Length=412 Score = 422 bits (1084), Expect = 5e-116, Method: Compositional matrix adjust. Identities = 222/347 (64%), Positives = 267/347 (77%), Gaps = 1/347 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGDT++LA LR LQTELTGAG LE LL+ D+LV PD VWVD G GL + IRF Sbjct 41 VLGDTDLLAALRFLQTELTGAGKLEALLAEPDIADILVAGPDDVWVDRGRGLEPATIRFP 100 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE++VRRLA RLAL+AGRRLDDAQPWVDGQL+ +G G+ VRLHA++PP+A GTC+SLR Sbjct 101 DEASVRRLAGRLALSAGRRLDDAQPWVDGQLSDVGRRGYTVRLHAIIPPLAADGTCISLR 160 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLR A++DL +L A GAI ++ DI+ R +FLV GGTG+GKTTLL A++G ++ Sbjct 161 VLRAASKDLPSLIAGGAIPAEVVGIIGDILRHRFSFLVIGGTGSGKTTLLNALIGEMNTR 220 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ER+VCVEDA ELAPRHP +V+LVAR ANVEG+GEV VR LVRQALRMRPDRIVVGEVRGA Sbjct 221 ERLVCVEDALELAPRHPQVVRLVARAANVEGVGEVPVRALVRQALRMRPDRIVVGEVRGA 280 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EV+DLL ALNTGH+G AGTVHAN+ EVPARMEAL ALGG+ R ALHSQL AA+Q++L V Sbjct 281 EVIDLLTALNTGHDGSAGTVHANSTSEVPARMEALAALGGMGRDALHSQLGAALQMVLGV 340 Query 301 ARDRAGRRRLAEIAVLRQA-EGRVQAVTVWHADRGMSDDAAALHDLL 346 AR G R L EI V+R+A +GRV V +W D G +D +L Sbjct 341 ARRADGSRGLVEIGVVRRAPDGRVDIVPIWLRDSGFTDHRPFFDTML 387 >gi|262200533|ref|YP_003271741.1| type II secretion system protein E [Gordonia bronchialis DSM 43247] gi|262083880|gb|ACY19848.1| type II secretion system protein E [Gordonia bronchialis DSM 43247] Length=389 Score = 417 bits (1071), Expect = 2e-114, Method: Compositional matrix adjust. Identities = 219/350 (63%), Positives = 269/350 (77%), Gaps = 1/350 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGDT++LA LR LQTELTGAG LE LL+ D+LV PD VWVD G GLRR+ I FA Sbjct 40 VLGDTDLLAALRFLQTELTGAGKLEQLLAEPDIADILVAGPDDVWVDRGQGLRRAPITFA 99 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DES+VRRLA RLAL AGRRLDDAQPWVDGQL IG G+ VRLHA++PP+A GTC+SLR Sbjct 100 DESSVRRLAGRLALGAGRRLDDAQPWVDGQLANIGRRGYTVRLHAIIPPLAADGTCISLR 159 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLR AT++ L ++GAI ++ +++ ARLAFL+ GGTG+GKTTLL A++G ++P Sbjct 160 VLRSATKNFDNLISSGAIPDEVVGVLREMLRARLAFLIVGGTGSGKTTLLNALVGEMNPA 219 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 +R++CVEDA+ELAP+HP +V+LVAR NVEG+GEV VR LVRQALRMRPDRI+VGEVRGA Sbjct 220 QRVLCVEDASELAPQHPQVVRLVARAPNVEGVGEVPVRALVRQALRMRPDRIIVGEVRGA 279 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EV+DLL ALNTGH+G AGTVHAN+ EVPARMEAL ALGG++R ALHSQLAAA+QV+L V Sbjct 280 EVIDLLTALNTGHDGSAGTVHANSTAEVPARMEALAALGGMNRDALHSQLAAALQVVLGV 339 Query 301 ARDRAGRRRLAEIA-VLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSR 349 AR G R L EI V R +G V+ +W G + A +L+ +R Sbjct 340 ARTADGDRGLVEIGLVSRGDDGLVRVAPMWLRHSGFTSAKAVFDELVATR 389 >gi|326383474|ref|ZP_08205161.1| type II secretion system protein E [Gordonia neofelifaecis NRRL B-59395] gi|326197880|gb|EGD55067.1| type II secretion system protein E [Gordonia neofelifaecis NRRL B-59395] Length=392 Score = 414 bits (1065), Expect = 9e-114, Method: Compositional matrix adjust. Identities = 225/351 (65%), Positives = 266/351 (76%), Gaps = 2/351 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGDT++LA LR LQTE+ G G LE LL+ TDVLV P VW D G+G + + F Sbjct 43 LLGDTDLLAALRYLQTEMVGVGRLEVLLADPEVTDVLVVGP-RVWADRGDGPELTDVTFD 101 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE++VRRLA RLAL AGRRLDDAQPWVDG+L G+G VRLHAV+PP+A GTC+SLR Sbjct 102 DEASVRRLAARLALGAGRRLDDAQPWVDGRLAGVGRNAAQVRLHAVIPPLAPDGTCISLR 161 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLR AT D AL +G+I + LVAD++ ARLAFLV GGTGAGKTT+L ++LG P Sbjct 162 VLRSATHDYRALVDSGSIAAEVSRLVADVIAARLAFLVVGGTGAGKTTVLGSLLGLAEPT 221 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 +RI+CVEDA EL PRHPH+V+LVAR ANVEG+GEVTVR LVRQALRMRPDRIVVGEVRGA Sbjct 222 QRILCVEDAPELDPRHPHVVRLVARAANVEGVGEVTVRMLVRQALRMRPDRIVVGEVRGA 281 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EV+DLL ALNTGHEG AGT+HAN+ EVPARMEAL ALGG+ R ALHSQL A+QV+L V Sbjct 282 EVIDLLTALNTGHEGCAGTLHANSIAEVPARMEALAALGGMGRTALHSQLGPAIQVILGV 341 Query 301 ARDRAGRRRLAEIAVL-RQAEGRVQAVTVWHADRGMSDDAAALHDLLRSRA 350 AR G+RRLAEI V+ R G V+ V W AD G +D A+L L+ R+ Sbjct 342 ARTAGGQRRLAEIGVVERDDSGLVRVVPAWCADGGFTDRRASLERLVGRRS 392 >gi|256374431|ref|YP_003098091.1| type II secretion system protein E [Actinosynnema mirum DSM 43827] gi|255918734|gb|ACU34245.1| type II secretion system protein E [Actinosynnema mirum DSM 43827] Length=372 Score = 405 bits (1041), Expect = 5e-111, Method: Compositional matrix adjust. Identities = 227/339 (67%), Positives = 258/339 (77%), Gaps = 8/339 (2%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGD EVL + L E GAG+LEPLL A GTTDVLVTAPD VWVD +GLRR+ + F Sbjct 36 VLGDEEVLRAMSELGREFAGAGLLEPLLRAPGTTDVLVTAPDQVWVDGEDGLRRADVVFP 95 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE AVRRLAQRLA+AAGRRLD+A P VDG L G AVRLHAVLPP+ T+ TCLSLR Sbjct 96 DERAVRRLAQRLAVAAGRRLDEAVPHVDGWLPG------AVRLHAVLPPI-TRNTCLSLR 148 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPAT DLA L A GA A + +V +R AFLV GGTG+GKTTLLAA+LG V D Sbjct 149 VLRPATHDLAELRARGAFSAEVAEALRALVRSRTAFLVVGGTGSGKTTLLAALLGCVPHD 208 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 +R+VCVEDA EL P HP +V+LVAR ANVEG GEVTVR LVRQALRMRPDRIVVGEVRGA Sbjct 209 QRVVCVEDAGELEPDHPQVVRLVARAANVEGAGEVTVRDLVRQALRMRPDRIVVGEVRGA 268 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EV DLL+ALNTGHEGGAGT+HAN+P EVPAR+EAL ALGGLDR ALHSQ+ AA++ +LHV Sbjct 269 EVCDLLSALNTGHEGGAGTLHANSPAEVPARLEALAALGGLDRVALHSQVLAALRAVLHV 328 Query 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDA 339 R G RRL EI V +A G ++ V VW D G + A Sbjct 329 RRTPEG-RRLVEIGVFERAAGDLRVVPVWRHDTGWRNRA 366 >gi|257057542|ref|YP_003135374.1| Flp pilus assembly protein, ATPase CpaF [Saccharomonospora viridis DSM 43017] gi|256587414|gb|ACU98547.1| Flp pilus assembly protein, ATPase CpaF [Saccharomonospora viridis DSM 43017] Length=395 Score = 403 bits (1035), Expect = 3e-110, Method: Compositional matrix adjust. Identities = 220/347 (64%), Positives = 258/347 (75%), Gaps = 1/347 (0%) Query 3 GDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFADE 62 G +VLA L++L EL G G LE LL+ TD+LVT PD VWVD +GL R+ +RF E Sbjct 38 GHLDVLAALKLLDDELAGVGPLEKLLATPEITDILVTGPDEVWVDGPDGLHRTDVRFEGE 97 Query 63 SAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLRVL 122 AVRRLAQRLALAAGRRLDDAQP+VDG L G G GG +RLHAVLPP++ GTCLSLRVL Sbjct 98 DAVRRLAQRLALAAGRRLDDAQPFVDGWLPGSGPGGR-IRLHAVLPPISADGTCLSLRVL 156 Query 123 RPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPDER 182 RPAT DL +L G +D A AL+ +V ARLAFLV G TG+GK+TLL A+LGAV P ER Sbjct 157 RPATHDLRSLRRLGTVDDAGLALLEALVKARLAFLVSGATGSGKSTLLGALLGAVDPAER 216 Query 183 IVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGAEV 242 +VCVED EL P HP V+LVAR NVEG GEVT+R+LVRQALRMRPDR+VVGEVRG EV Sbjct 217 VVCVEDVGELQPDHPQFVRLVARPPNVEGAGEVTLRELVRQALRMRPDRLVVGEVRGREV 276 Query 243 VDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHVAR 302 V+LL ALNTGH+GGAGT+HAN P EVPAR+EAL ALGGL R ALHSQLAAAVQV+LH+ R Sbjct 277 VELLTALNTGHDGGAGTLHANAPAEVPARLEALAALGGLSREALHSQLAAAVQVVLHMRR 336 Query 303 DRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSR 349 + +GRR LAEI ++R+ V W ++ D+ LL R Sbjct 337 EPSGRRVLAEIGLVRRRGDVVSVEPAWRPGERLTRDSPLTLALLSRR 383 >gi|134096980|ref|YP_001102641.1| type II secretion system protein E [Saccharopolyspora erythraea NRRL 2338] gi|133909603|emb|CAL99715.1| type II secretion system protein E [Saccharopolyspora erythraea NRRL 2338] Length=377 Score = 402 bits (1032), Expect = 6e-110, Method: Compositional matrix adjust. Identities = 225/355 (64%), Positives = 256/355 (73%), Gaps = 11/355 (3%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 ++GD +VL LR +Q E GAG LEPLL TDVLVTAPD+VWVD G+GLRR FA Sbjct 28 LVGDADVLDRLRQVQREFLGAGALEPLLRDPAVTDVLVTAPDAVWVDQGDGLRRCTETFA 87 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQL---TGIGVGGFAVRLHAVLPPVATQGTCL 117 DE AVRRLAQRLALA+GRRLDDAQPWVD L TG AVRLHAVLPPVA TC+ Sbjct 88 DEDAVRRLAQRLALASGRRLDDAQPWVDAWLPRATG------AVRLHAVLPPVA-DSTCI 140 Query 118 SLRVLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAV 177 SLRVLRPA L +L D A L+ I+ RLAFLV GG GAGKTTLLAAMLG V Sbjct 141 SLRVLRPAVHGLDSLHGKDMFDAPTAELLRSIIATRLAFLVVGGAGAGKTTLLAAMLGEV 200 Query 178 SPDERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEV 237 SP ERI+CVE+A+EL P HPH+V+L+ R N+EG GE+ VR LVRQALRMRPDR+VVGEV Sbjct 201 SPAERIICVEEASELQPDHPHVVRLLTRPPNIEGAGEIQVRDLVRQALRMRPDRLVVGEV 260 Query 238 RGAEVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVL 297 RG E+ +LLAALNTGHEGG GT+HAN+P EVPARMEAL ALGGL RAALHSQLAAAVQV+ Sbjct 261 RGGEICELLAALNTGHEGGGGTLHANSPREVPARMEALAALGGLSRAALHSQLAAAVQVV 320 Query 298 LHVARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSRASA 352 LHV R R G RRLA + V + ++ W G A AL +L +R A Sbjct 321 LHVQRTRQG-RRLAAVGVPFRVGDHIEVRPAWEQHSGWGPGAEALAAMLSARGGA 374 >gi|291006275|ref|ZP_06564248.1| type II secretion system protein E [Saccharopolyspora erythraea NRRL 2338] Length=385 Score = 401 bits (1031), Expect = 7e-110, Method: Compositional matrix adjust. Identities = 225/355 (64%), Positives = 256/355 (73%), Gaps = 11/355 (3%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 ++GD +VL LR +Q E GAG LEPLL TDVLVTAPD+VWVD G+GLRR FA Sbjct 36 LVGDADVLDRLRQVQREFLGAGALEPLLRDPAVTDVLVTAPDAVWVDQGDGLRRCTETFA 95 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQL---TGIGVGGFAVRLHAVLPPVATQGTCL 117 DE AVRRLAQRLALA+GRRLDDAQPWVD L TG AVRLHAVLPPVA TC+ Sbjct 96 DEDAVRRLAQRLALASGRRLDDAQPWVDAWLPRATG------AVRLHAVLPPVA-DSTCI 148 Query 118 SLRVLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAV 177 SLRVLRPA L +L D A L+ I+ RLAFLV GG GAGKTTLLAAMLG V Sbjct 149 SLRVLRPAVHGLDSLHGKDMFDAPTAELLRSIIATRLAFLVVGGAGAGKTTLLAAMLGEV 208 Query 178 SPDERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEV 237 SP ERI+CVE+A+EL P HPH+V+L+ R N+EG GE+ VR LVRQALRMRPDR+VVGEV Sbjct 209 SPAERIICVEEASELQPDHPHVVRLLTRPPNIEGAGEIQVRDLVRQALRMRPDRLVVGEV 268 Query 238 RGAEVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVL 297 RG E+ +LLAALNTGHEGG GT+HAN+P EVPARMEAL ALGGL RAALHSQLAAAVQV+ Sbjct 269 RGGEICELLAALNTGHEGGGGTLHANSPREVPARMEALAALGGLSRAALHSQLAAAVQVV 328 Query 298 LHVARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDLLRSRASA 352 LHV R R G RRLA + V + ++ W G A AL +L +R A Sbjct 329 LHVQRTRQG-RRLAAVGVPFRVGDHIEVRPAWEQHSGWGPGAEALAAMLSARGGA 382 >gi|333917957|ref|YP_004491538.1| Type II secretion system protein E [Amycolicicoccus subflavus DQS3-9A1] gi|333480178|gb|AEF38738.1| Type II secretion system protein E [Amycolicicoccus subflavus DQS3-9A1] Length=392 Score = 401 bits (1030), Expect = 9e-110, Method: Compositional matrix adjust. Identities = 226/350 (65%), Positives = 268/350 (77%), Gaps = 1/350 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGD +VL+ LRVL TE+ GAGIL+PLL TDVLV S WVD G G+ R+ +R + Sbjct 39 VLGDADVLSALRVLHTEMDGAGILDPLLENPQVTDVLVLGDGSAWVDAGQGVERASVRLS 98 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 D AVRRLAQRLAL AGRRLDDAQPWVDG L +G G VRLHAVLPP+A G C+SLR Sbjct 99 DAGAVRRLAQRLALRAGRRLDDAQPWVDGWLQDLGGHGSGVRLHAVLPPIAVDGPCISLR 158 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPA+ L LA+ G++ A L+ IV ARL+FLV GGTG GKTTLLAA+LG V Sbjct 159 VLRPASHTLGDLASQGSVPTAVLPLLERIVEARLSFLVTGGTGTGKTTLLAALLGRVPHT 218 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDAAELAP+HPHL++L AR ANVEG G V +R+LVRQALRMRPDRIVVGEVRGA Sbjct 219 ERIVCVEDAAELAPQHPHLIRLAARAANVEGAGAVELRELVRQALRMRPDRIVVGEVRGA 278 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EV+DLLA+LNTGH+G AGTVHAN+P E+PAR+EAL +LGG++ AALHSQLAAA++++LHV Sbjct 279 EVIDLLASLNTGHDGSAGTVHANSPKELPARLEALASLGGINSAALHSQLAAALRLVLHV 338 Query 301 ARDRAGRRRLAEIAVL-RQAEGRVQAVTVWHADRGMSDDAAALHDLLRSR 349 ARDR G R+L EI VL + + G V+AVT W G L LLR+R Sbjct 339 ARDRRGTRKLCEIGVLSKTSTGNVEAVTCWSYADGRGPAWGELDGLLRTR 388 >gi|169627537|ref|YP_001701186.1| Type II secretion system protein E [Mycobacterium abscessus ATCC 19977] gi|169239504|emb|CAM60532.1| Type II secretion system protein E [Mycobacterium abscessus] Length=358 Score = 398 bits (1022), Expect = 9e-109, Method: Compositional matrix adjust. Identities = 216/294 (74%), Positives = 247/294 (85%), Gaps = 0/294 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGD++VL N++ LQ+EL+GAGILEPLL AD TTDVLVTAPD VWVDDG+GLR + +RF Sbjct 36 VLGDSDVLHNIKELQSELSGAGILEPLLCADDTTDVLVTAPDRVWVDDGHGLRLTAVRFT 95 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE+AVRRLAQRLALA GRRLDDAQP+VDGQL +G VRLHAVL P+A GTC+SLR Sbjct 96 DEAAVRRLAQRLALAVGRRLDDAQPFVDGQLLDVGPPRSVVRLHAVLAPIAAAGTCISLR 155 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRP + L L A G + A L+ ++ ARLAFLV GGTGAGKTTLL+A+LGAV P Sbjct 156 VLRPMAKGLDQLIADGTVPEDAGRLLRGMLAARLAFLVTGGTGAGKTTLLSALLGAVDPT 215 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERI+C EDAAELAPRHPH+V L AR N+EG+GEVT+RQLVRQALRMRPDRIVVGEVRGA Sbjct 216 ERIICAEDAAELAPRHPHVVSLAARAVNIEGVGEVTLRQLVRQALRMRPDRIVVGEVRGA 275 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAV 294 EVV+LL ALNTGH+GGAGTVHAN P EVPAR+EALGALGGLDRAALHSQ AAA+ Sbjct 276 EVVELLTALNTGHDGGAGTVHANAPAEVPARLEALGALGGLDRAALHSQFAAAI 329 >gi|317508890|ref|ZP_07966528.1| type II/IV secretion system protein [Segniliparus rugosus ATCC BAA-974] gi|316252813|gb|EFV12245.1| type II/IV secretion system protein [Segniliparus rugosus ATCC BAA-974] Length=370 Score = 390 bits (1001), Expect = 3e-106, Method: Compositional matrix adjust. Identities = 210/331 (64%), Positives = 252/331 (77%), Gaps = 0/331 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGDT+VL LR L+ E GAG LE LL+ D+LV PD VW D G GL RS + FA Sbjct 39 LLGDTDVLEALRALRVEFLGAGPLEELLAEPDLCDILVNGPDQVWADRGQGLVRSSLSFA 98 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE+AVRRLA RLAL+AGRRLD+AQP+VDG+L G G G VRLHAVLPP+A +GT ++LR Sbjct 99 DEAAVRRLACRLALSAGRRLDEAQPFVDGRLPGFGHRGCDVRLHAVLPPLAVRGTAIALR 158 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPATQ L L A G++ AA L V R +FLV G TG+GKTTLL+A+L VSP Sbjct 159 VLRPATQRLDELVARGSVRAEAAELARRAVAERHSFLVTGSTGSGKTTLLSALLAEVSPQ 218 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIV VED+ ELAP HPH+V LVAR+ NVEG GEVTVR+LVRQ LRMRPDR+VVGEVRGA Sbjct 219 ERIVLVEDSPELAPAHPHVVSLVARKPNVEGAGEVTVRELVRQTLRMRPDRVVVGEVRGA 278 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLL+ALNTGH+GGAGTVH N+P E+PAR+EAL A+GGLDR LH QL AAV+++ H+ Sbjct 279 EVVDLLSALNTGHDGGAGTVHCNSPNELPARLEALAAMGGLDRQGLHGQLEAAVRLVFHM 338 Query 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHA 331 R+ +G R LA+IA L + +G V A +W A Sbjct 339 RREPSGARTLAQIARLDRRDGVVVARELWSA 369 >gi|296394991|ref|YP_003659875.1| type II secretion system protein E [Segniliparus rotundus DSM 44985] gi|296182138|gb|ADG99044.1| type II secretion system protein E [Segniliparus rotundus DSM 44985] Length=371 Score = 378 bits (971), Expect = 8e-103, Method: Compositional matrix adjust. Identities = 209/332 (63%), Positives = 250/332 (76%), Gaps = 1/332 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGDT+VL +R L+ E GAG LE LL D+LV PD VW D G GL RS + F Sbjct 39 LLGDTDVLDAVRALRVEFLGAGPLEELLDEPDLCDILVNGPDQVWTDRGQGLVRSALTFP 98 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE+AVRRLA RLAL+AGRRLD+AQP+VDG+L G G G VRLHAVLPP+A +GT ++LR Sbjct 99 DEAAVRRLACRLALSAGRRLDEAQPFVDGKLPGFGCRGCDVRLHAVLPPLAARGTSIALR 158 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPATQ L L G++ P AAALV V R +FLV G TG+GKTTLL+A+L VS Sbjct 159 VLRPATQSLDELVERGSVPPEAAALVRRAVAERHSFLVTGSTGSGKTTLLSALLAQVSQH 218 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIV VED+ ELAP HPH+V LVAR+ NVEG GE+TVR+LVRQ+LRMRPDR+VVGEVRGA Sbjct 219 ERIVLVEDSPELAPAHPHVVSLVARKPNVEGAGEITVRELVRQSLRMRPDRVVVGEVRGA 278 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVVDLL+ALNTGH+GGAGTVH N+P E+PAR+E+L A+GGLDRA LH QLAA+V++L H+ Sbjct 279 EVVDLLSALNTGHDGGAGTVHCNSPRELPARLESLAAMGGLDRAGLHGQLAASVRLLFHM 338 Query 301 ARD-RAGRRRLAEIAVLRQAEGRVQAVTVWHA 331 R +G R L EIA L G V A +W A Sbjct 339 RRTAPSGARTLVEIARLDAQAGGVIARELWSA 370 >gi|300790609|ref|YP_003770900.1| pilus assembly protein CpaF [Amycolatopsis mediterranei U32] gi|299800123|gb|ADJ50498.1| pilus assembly protein CpaF [Amycolatopsis mediterranei U32] gi|340532298|gb|AEK47503.1| pilus assembly protein CpaF [Amycolatopsis mediterranei S699] Length=383 Score = 377 bits (967), Expect = 2e-102, Method: Compositional matrix adjust. Identities = 222/337 (66%), Positives = 248/337 (74%), Gaps = 1/337 (0%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LG VL R + E GAG L PLL TTDVLVT P VW D GL RS IRF Sbjct 36 VLGHDAVLDAARQARDEFIGAGPLAPLLDDPATTDVLVTGPHEVWTDGPQGLIRSGIRFK 95 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 DE +VRRLAQRLALAAGRRLDDAQP+VDG L G G G +R+HAVLPP+A GTCLSLR Sbjct 96 DEESVRRLAQRLALAAGRRLDDAQPYVDGWLPGAGPHG-RIRVHAVLPPIAAGGTCLSLR 154 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 VLRPAT DL L GA D A A L+ +V+ R+AFLV GGTGAGKTTLLAA+LGAV P Sbjct 155 VLRPATHDLTTLGELGAFDEAGARLLRTVVSRRMAFLVTGGTGAGKTTLLAALLGAVDPG 214 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIVCVEDA EL P HP V LVAR NVEG G V + +LVRQALRMRPDR+VVGEVRGA Sbjct 215 ERIVCVEDAGELQPAHPQFVGLVARPPNVEGAGAVGLPELVRQALRMRPDRLVVGEVRGA 274 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EV LL ALNTGH+GGA TVHAN+P EVPAR+EAL ALGGL R A+HSQL AA++V+LH+ Sbjct 275 EVGALLTALNTGHDGGACTVHANSPAEVPARIEALAALGGLGRDAVHSQLVAAIRVVLHM 334 Query 301 ARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSD 337 R+ GRRRLAE+ VLR GR + V VW A R D Sbjct 335 RREADGRRRLAEVGVLRAERGRARVVPVWRAGRWTVD 371 >gi|254773478|ref|ZP_05214994.1| hypothetical protein MaviaA2_02205 [Mycobacterium avium subsp. avium ATCC 25291] Length=247 Score = 377 bits (967), Expect = 2e-102, Method: Compositional matrix adjust. Identities = 208/244 (86%), Positives = 226/244 (93%), Gaps = 0/244 (0%) Query 106 VLPPVATQGTCLSLRVLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAG 165 +LPPVA GTCLSLRVLRPA+QDLAAL+AAGAI+PAAAALVADI+ ARLAFLV GGTGAG Sbjct 1 MLPPVAAAGTCLSLRVLRPASQDLAALSAAGAIEPAAAALVADIIAARLAFLVSGGTGAG 60 Query 166 KTTLLAAMLGAVSPDERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQAL 225 KTTLLAAMLGAV PDERIVCVEDAAELAP HPHLVKLVAR ANVEG+GEV VRQLVRQAL Sbjct 61 KTTLLAAMLGAVPPDERIVCVEDAAELAPPHPHLVKLVARCANVEGVGEVPVRQLVRQAL 120 Query 226 RMRPDRIVVGEVRGAEVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAA 285 RMRPDRIVVGEVRGAEVVDLLAALNTGH+GGAGTVHANNPGEVPAR+EALGALGGLDRAA Sbjct 121 RMRPDRIVVGEVRGAEVVDLLAALNTGHDGGAGTVHANNPGEVPARLEALGALGGLDRAA 180 Query 286 LHSQLAAAVQVLLHVARDRAGRRRLAEIAVLRQAEGRVQAVTVWHADRGMSDDAAALHDL 345 LHSQLAAAVQVLLHV R+RAGRRRL+EIAVL++ + RV++VTVWHADRGM++ A L + Sbjct 181 LHSQLAAAVQVLLHVERNRAGRRRLSEIAVLQRVQERVRSVTVWHADRGMTEAAPLLRRV 240 Query 346 LRSR 349 L R Sbjct 241 LEDR 244 >gi|296141576|ref|YP_003648819.1| type II secretion system protein E [Tsukamurella paurometabola DSM 20162] gi|296029710|gb|ADG80480.1| type II secretion system protein E [Tsukamurella paurometabola DSM 20162] Length=393 Score = 376 bits (966), Expect = 3e-102, Method: Compositional matrix adjust. Identities = 227/353 (65%), Positives = 261/353 (74%), Gaps = 5/353 (1%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGDTE+L L L+TEL GAG LEPLL+ DVLV P VW+D G GL + + F Sbjct 39 VLGDTELLDGLAYLETELVGAGRLEPLLADPSVADVLVAGPGRVWIDRGAGLELTDVVFE 98 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFA---VRLHAVLPPVATQGTCL 117 D+ AVRRLA RLALAAGRR+DDAQPWVDG L G GG A +RLHAVLPP+A GTC+ Sbjct 99 DDDAVRRLAARLALAAGRRIDDAQPWVDGHLPS-GPGGRAGSGIRLHAVLPPLAHGGTCI 157 Query 118 SLRVLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAV 177 SLRVLRPATQ L AL AAGA+ A LV +V ARLAFLV GGTG+GKTTLL +LG V Sbjct 158 SLRVLRPATQSLDALIAAGAVPDEVAPLVRAVVAARLAFLVVGGTGSGKTTLLNGLLGEV 217 Query 178 SPDERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEV 237 + ER++CVEDA EL P HPH++ L+AR ANVEG+GEVTVR LVRQ+LRMRPDRIVVGEV Sbjct 218 ATGERVLCVEDAHELDPVHPHVISLIARGANVEGVGEVTVRDLVRQSLRMRPDRIVVGEV 277 Query 238 RGAEVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVL 297 RGAEVVDLL ALNTGH+GGAGTVHAN+P EVPAR+EAL ALGGL R ALH+QLAAA QV+ Sbjct 278 RGAEVVDLLTALNTGHDGGAGTVHANSPREVPARLEALAALGGLGREALHAQLAAAFQVV 337 Query 298 LHVARDRAGRRRLAEIAVL-RQAEGRVQAVTVWHADRGMSDDAAALHDLLRSR 349 V R +GRR L I ++ R A+G V+ W D G D A L LL R Sbjct 338 FAVHRWPSGRRGLRSIGMVERGADGYVRVRPAWERDGGFGDAAGELRGLLDER 390 >gi|302530826|ref|ZP_07283168.1| P-type DNA transfer ATPase VirB11 [Streptomyces sp. AA4] gi|302439721|gb|EFL11537.1| P-type DNA transfer ATPase VirB11 [Streptomyces sp. AA4] Length=379 Score = 372 bits (954), Expect = 6e-101, Method: Compositional matrix adjust. Identities = 213/328 (65%), Positives = 246/328 (75%), Gaps = 4/328 (1%) Query 2 LGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFAD 61 L VLA +R + E GAG L PLL D TDVLVTAPD +W D GL R+ IRF Sbjct 37 LSHDAVLAAVRQARDEFVGAGPLAPLLEDDTITDVLVTAPDQIWTDGPTGLTRTPIRFPS 96 Query 62 ESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLRV 121 E AVRRLAQRLALAAGRRLDDAQP+VDG L V +R+HAVLPP+A GTCLSLRV Sbjct 97 EDAVRRLAQRLALAAGRRLDDAQPYVDGWLP---VRQGRIRVHAVLPPIAANGTCLSLRV 153 Query 122 LRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPDE 181 LRP T DL+AL A G+IDP A +++ I+ RLAFL+ GGTGAGKTTLL+A+L V+P E Sbjct 154 LRPVTHDLSALHAHGSIDPTALSILEAILKHRLAFLITGGTGAGKTTLLSALLSEVAPTE 213 Query 182 RIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGAE 241 RIVCVEDA EL P HP V LVAR ANVEG G V + +LVRQALRMRPDR+VVGEVRGAE Sbjct 214 RIVCVEDAGELRPTHPQFVSLVARPANVEGAGAVELPELVRQALRMRPDRLVVGEVRGAE 273 Query 242 VVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHVA 301 V LL A+NTGH+GGA T+HAN+P E PAR+EAL ALGGL R ALHSQLAAAV+V+LH+ Sbjct 274 VCSLLNAMNTGHDGGACTLHANSPAEAPARLEALAALGGLPRDALHSQLAAAVRVILHMR 333 Query 302 RDRAGRRRLAEIAVLRQAEGRVQAVTVW 329 R G RRLAE+AVL++ G V+ VW Sbjct 334 RTTTG-RRLAEVAVLQRYHGEVKTHPVW 360 >gi|21221975|ref|NP_627754.1| secretory protein [Streptomyces coelicolor A3(2)] gi|4539574|emb|CAB38493.1| putative secretory protein [Streptomyces coelicolor A3(2)] Length=523 Score = 370 bits (951), Expect = 1e-100, Method: Compositional matrix adjust. Identities = 205/327 (63%), Positives = 242/327 (75%), Gaps = 7/327 (2%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGD E+L L++EL G+G LEPLL+ TDVLV+APD VWVD G GL + + F Sbjct 164 VLGDAEILGAAEQLRSELVGSGPLEPLLADPSVTDVLVSAPDRVWVDRGGGLELAPVSFP 223 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 D +AVRRLAQRLA AGRRLDDA+PWVD +L RLHAVLPPVA TCL+LR Sbjct 224 DAAAVRRLAQRLATVAGRRLDDARPWVDARLP------DGTRLHAVLPPVAVDCTCLALR 277 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 V+RP L LAAAG + P ++ ++ ARL+FLV GGTG+GKTTLL+A+LG V PD Sbjct 278 VVRPRAFTLRELAAAGTVPPGGDRVLRALLRARLSFLVSGGTGSGKTTLLSALLGLVGPD 337 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIV ED+AEL P HPH+V+L R AN EG G VT+ LVRQALRMRPDR+VVGEVRG Sbjct 338 ERIVLAEDSAELRPDHPHVVRLETRPANQEGAGLVTLEDLVRQALRMRPDRLVVGEVRGP 397 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVV LLAALNTGHEGG GTVHAN +VPAR+EALG GL+RAALHSQLAAA+ V+LH+ Sbjct 398 EVVHLLAALNTGHEGGCGTVHANAAADVPARLEALGTTAGLNRAALHSQLAAALSVVLHL 457 Query 301 ARDRAGRRRLAEIAVL-RQAEGRVQAV 326 RDRAGRRR+AE+ VL R G V+ V Sbjct 458 VRDRAGRRRIAEVHVLERDPSGLVRTV 484 >gi|289770833|ref|ZP_06530211.1| secretory protein [Streptomyces lividans TK24] gi|289701032|gb|EFD68461.1| secretory protein [Streptomyces lividans TK24] Length=455 Score = 370 bits (951), Expect = 2e-100, Method: Compositional matrix adjust. Identities = 205/327 (63%), Positives = 242/327 (75%), Gaps = 7/327 (2%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGD E+L L++EL G+G LEPLL+ TDVLV+APD VWVD G GL + + F Sbjct 96 VLGDAEILGAAEQLRSELVGSGPLEPLLADPSVTDVLVSAPDRVWVDRGGGLELAPVSFP 155 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 D +AVRRLAQRLA AGRRLDDA+PWVD +L RLHAVLPPVA TCL+LR Sbjct 156 DAAAVRRLAQRLATVAGRRLDDARPWVDARLPD------GTRLHAVLPPVAVDCTCLALR 209 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 V+RP L LAAAG + P ++ ++ ARL+FLV GGTG+GKTTLL+A+LG V PD Sbjct 210 VVRPRAFTLRELAAAGTVPPGGDRVLRALLRARLSFLVSGGTGSGKTTLLSALLGLVGPD 269 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIV ED+AEL P HPH+V+L R AN EG G VT+ LVRQALRMRPDR+VVGEVRG Sbjct 270 ERIVLAEDSAELRPDHPHVVRLETRPANQEGAGLVTLEDLVRQALRMRPDRLVVGEVRGP 329 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVV LLAALNTGHEGG GTVHAN +VPAR+EALG GL+RAALHSQLAAA+ V+LH+ Sbjct 330 EVVHLLAALNTGHEGGCGTVHANAAADVPARLEALGTTAGLNRAALHSQLAAALSVVLHL 389 Query 301 ARDRAGRRRLAEIAVL-RQAEGRVQAV 326 RDRAGRRR+AE+ VL R G V+ V Sbjct 390 VRDRAGRRRIAEVHVLERDPSGLVRTV 416 >gi|345016207|ref|YP_004818561.1| helicase/secretion neighborhood ATPase [Streptomyces violaceusniger Tu 4113] gi|344042556|gb|AEM88281.1| helicase/secretion neighborhood ATPase [Streptomyces violaceusniger Tu 4113] Length=388 Score = 369 bits (948), Expect = 3e-100, Method: Compositional matrix adjust. Identities = 211/335 (63%), Positives = 248/335 (75%), Gaps = 9/335 (2%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGDTEVL + L++EL G G LE LL+A TDVLVTAPD VWVD G+GL R+ + F Sbjct 38 LLGDTEVLGVVEALRSELVGTGPLETLLAAPDVTDVLVTAPDEVWVDRGSGLERTAVTFV 97 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 D +AVRRLAQRLA AGRRLDDA+PWVD +L RLHAVLPPVA TCLSLR Sbjct 98 DAAAVRRLAQRLAAVAGRRLDDARPWVDARLPD------GTRLHAVLPPVAVGSTCLSLR 151 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 V+RP LA L AAG + P A L+ ++ ARL++L+ GGTG+GKTTLL+ +LG V P Sbjct 152 VVRPRAFSLAELEAAGTVPPGGAHLLRAMLDARLSYLISGGTGSGKTTLLSTLLGLVGPQ 211 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIV ED+AEL P HPH+V+L R AN EG G+VT+R LVRQALRMRPDR+VVGEVRGA Sbjct 212 ERIVLAEDSAELRPDHPHVVRLETRPANQEGRGQVTLRDLVRQALRMRPDRLVVGEVRGA 271 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EV DLL ALNTGHEGG GTVHAN +VPAR+EALG+ GLDRAALHSQLAAA+ VL+H+ Sbjct 272 EVTDLLGALNTGHEGGCGTVHANTAADVPARLEALGSTAGLDRAALHSQLAAALSVLVHL 331 Query 301 ARDRAGRRRLAEIAVL-RQAEGRVQAV--TVWHAD 332 RDR GRRR+AE+ VL R G V V VW + Sbjct 332 VRDRGGRRRIAELHVLDRDRAGFVTTVPAAVWSPE 366 >gi|29831149|ref|NP_825783.1| hypothetical protein SAV_4606 [Streptomyces avermitilis MA-4680] gi|29608263|dbj|BAC72318.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length=433 Score = 365 bits (938), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 204/335 (61%), Positives = 243/335 (73%), Gaps = 9/335 (2%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 +LGD EVL ++EL G+G LEPLL+ TDVLV+APD VWVD G GL + + F Sbjct 83 VLGDAEVLGAAERFRSELVGSGPLEPLLADPSVTDVLVSAPDRVWVDRGGGLELTAVSFP 142 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 D +AVRRLAQRLA AGRRLDDA+PW D +L RLHAVL PVA CLSLR Sbjct 143 DAAAVRRLAQRLAAVAGRRLDDARPWADARLPD------GTRLHAVLEPVAVGSACLSLR 196 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 V+RP LA L AAG + P ++ ++ ARL+FL+ GGTG+GKTTLL+A+LG V P Sbjct 197 VVRPRAFTLAELVAAGTVPPGGDRVLRALLEARLSFLISGGTGSGKTTLLSALLGLVGPG 256 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIV ED+AEL P HPH+V+L R AN EG+G VT+++LVRQALRMRPDR+VVGEVRG Sbjct 257 ERIVLAEDSAELRPDHPHVVRLEGRPANQEGVGLVTLQELVRQALRMRPDRLVVGEVRGP 316 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EVV LLAALNTGH+GG GTVHAN +VPAR+EALG GLDRAALHSQLAAA+ V+LH+ Sbjct 317 EVVSLLAALNTGHDGGCGTVHANAAAQVPARLEALGTAAGLDRAALHSQLAAALSVVLHL 376 Query 301 ARDRAGRRRLAEIAVL-RQAEGRVQAVTV--WHAD 332 RDRAGRRR+AE+ VL R A G V V W A+ Sbjct 377 VRDRAGRRRIAEVHVLERDASGLVVTVPALRWGAE 411 >gi|239989549|ref|ZP_04710213.1| putative Type II/IV secretory protein [Streptomyces roseosporus NRRL 11379] Length=382 Score = 365 bits (938), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 201/327 (62%), Positives = 242/327 (75%), Gaps = 7/327 (2%) Query 1 MLGDTEVLANLRVLQTELTGAGILEPLLSADGTTDVLVTAPDSVWVDDGNGLRRSQIRFA 60 ++GD EVL L+ EL G G+LEPLL+ TDVLV+APD VWVD G GL+ + + F Sbjct 35 LMGDAEVLGAAEELRGELVGTGVLEPLLADPEVTDVLVSAPDRVWVDRGGGLQLTGVTFP 94 Query 61 DESAVRRLAQRLALAAGRRLDDAQPWVDGQLTGIGVGGFAVRLHAVLPPVATQGTCLSLR 120 D +AVRRLAQRLA AGRRLDDA+PWVD +L R+HAVLPPVA TCLSLR Sbjct 95 DAAAVRRLAQRLAAVAGRRLDDARPWVDARLPD------GTRMHAVLPPVAVVSTCLSLR 148 Query 121 VLRPATQDLAALAAAGAIDPAAAALVADIVTARLAFLVCGGTGAGKTTLLAAMLGAVSPD 180 V+RP LA L AG + P ++ +V AR+++++ GGTGAGKTTLL+++LGAV + Sbjct 149 VVRPRAFSLAELVDAGTVPPGGDRILRALVEARISYVISGGTGAGKTTLLSSLLGAVGVN 208 Query 181 ERIVCVEDAAELAPRHPHLVKLVARRANVEGIGEVTVRQLVRQALRMRPDRIVVGEVRGA 240 ERIV ED+AEL P HPH+V+L +R AN EG G VT+R LVRQALRMRPDR+VVGEVRGA Sbjct 209 ERIVLAEDSAELRPDHPHVVRLESRPANQEGAGRVTLRDLVRQALRMRPDRLVVGEVRGA 268 Query 241 EVVDLLAALNTGHEGGAGTVHANNPGEVPARMEALGALGGLDRAALHSQLAAAVQVLLHV 300 EV +LLAALNTGHEGG GTVHAN VPAR+EALG GLDR ALHSQLAAA+ V++H+ Sbjct 269 EVTELLAALNTGHEGGCGTVHANAAEHVPARLEALGTAAGLDRVALHSQLAAALSVVVHL 328 Query 301 ARDRAGRRRLAEIAVL-RQAEGRVQAV 326 RDRAGRRR+AE+ VL R A G V V Sbjct 329 VRDRAGRRRVAEVHVLERDAAGLVFTV 355 Lambda K H 0.321 0.135 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 654597672016 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40