BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3662c Length=256 Score E Sequences producing significant alignments: (Bits) Value gi|15610798|ref|NP_218179.1| hypothetical protein Rv3662c [Mycob... 487 9e-136 gi|339300069|gb|AEJ52179.1| hypothetical protein CCDC5180_3342 [... 486 1e-135 gi|31794832|ref|NP_857325.1| hypothetical protein Mb3686c [Mycob... 485 2e-135 gi|289748174|ref|ZP_06507552.1| conserved hypothetical protein [... 484 6e-135 gi|323717521|gb|EGB26723.1| hypothetical protein TMMG_00148 [Myc... 471 6e-131 gi|340628634|ref|YP_004747086.1| hypothetical protein MCAN_36821... 432 2e-119 gi|307081843|ref|ZP_07491013.1| hypothetical protein TMKG_00901 ... 402 2e-110 gi|289747497|ref|ZP_06506875.1| conserved hypothetical protein [... 373 2e-101 gi|41406511|ref|NP_959347.1| hypothetical protein MAP0413 [Mycob... 357 9e-97 gi|306801291|ref|ZP_07437959.1| hypothetical protein TMHG_02722 ... 354 7e-96 gi|342862003|ref|ZP_08718647.1| hypothetical protein MCOL_24050 ... 352 3e-95 gi|118619404|ref|YP_907736.1| hypothetical protein MUL_4236 [Myc... 352 4e-95 gi|183985120|ref|YP_001853411.1| hypothetical protein MMAR_5150 ... 349 3e-94 gi|308378428|ref|ZP_07668750.1| hypothetical protein TMIG_00010 ... 346 2e-93 gi|118465103|ref|YP_879750.1| hypothetical protein MAV_0468 [Myc... 343 1e-92 gi|296166717|ref|ZP_06849141.1| oxidoreductase [Mycobacterium pa... 337 1e-90 gi|254820852|ref|ZP_05225853.1| hypothetical protein MintA_13038... 331 6e-89 gi|307086456|ref|ZP_07495569.1| hypothetical protein TMLG_00147 ... 322 4e-86 gi|15828226|ref|NP_302489.1| hypothetical protein ML2289 [Mycoba... 321 8e-86 gi|333992584|ref|YP_004525198.1| hypothetical protein JDM601_394... 306 1e-81 gi|126437759|ref|YP_001073450.1| hypothetical protein Mjls_5195 ... 300 1e-79 gi|108801771|ref|YP_641968.1| hypothetical protein Mmcs_4808 [My... 290 2e-76 gi|240173382|ref|ZP_04752040.1| hypothetical protein MkanA1_2897... 280 1e-73 gi|315446288|ref|YP_004079167.1| hypothetical protein Mspyr1_479... 273 1e-71 gi|120406371|ref|YP_956200.1| hypothetical protein Mvan_5424 [My... 273 1e-71 gi|145221973|ref|YP_001132651.1| hypothetical protein Mflv_1381 ... 271 9e-71 gi|169627534|ref|YP_001701183.1| hypothetical protein MAB_0430 [... 263 1e-68 gi|333917954|ref|YP_004491535.1| hypothetical protein AS9A_0276 ... 262 3e-68 gi|262200529|ref|YP_003271737.1| hypothetical protein Gbro_0514 ... 242 3e-62 gi|343926482|ref|ZP_08765987.1| hypothetical protein GOALK_060_0... 234 1e-59 gi|326383478|ref|ZP_08205165.1| hypothetical protein SCNU_11096 ... 229 3e-58 gi|296141579|ref|YP_003648822.1| hypothetical protein Tpau_3911 ... 229 4e-58 gi|312138007|ref|YP_004005343.1| hypothetical protein REQ_05340 ... 223 3e-56 gi|256374419|ref|YP_003098079.1| hypothetical protein Amir_0264 ... 220 1e-55 gi|229494790|ref|ZP_04388546.1| conserved hypothetical protein [... 219 3e-55 gi|226303990|ref|YP_002763948.1| hypothetical protein RER_05010 ... 217 1e-54 gi|111021313|ref|YP_704285.1| hypothetical protein RHA1_ro04337 ... 215 5e-54 gi|226363657|ref|YP_002781439.1| hypothetical protein ROP_42470 ... 215 6e-54 gi|54022320|ref|YP_116562.1| hypothetical protein nfa3560 [Nocar... 213 3e-53 gi|134096952|ref|YP_001102613.1| hypothetical protein SACE_0338 ... 212 4e-53 gi|319951116|ref|ZP_08024966.1| hypothetical protein ES5_15801 [... 209 3e-52 gi|257057550|ref|YP_003135382.1| hypothetical protein Svir_36000... 209 4e-52 gi|260579404|ref|ZP_05847286.1| conserved hypothetical protein [... 209 4e-52 gi|300790618|ref|YP_003770909.1| hypothetical protein AMED_8814 ... 209 5e-52 gi|68537060|ref|YP_251765.1| hypothetical protein jk1965 [Coryne... 208 5e-52 gi|336326572|ref|YP_004606538.1| hypothetical protein CRES_2021 ... 199 4e-49 gi|296393543|ref|YP_003658427.1| hypothetical protein Srot_1123 ... 196 2e-48 gi|334563450|ref|ZP_08516441.1| hypothetical protein CbovD2_0266... 193 2e-47 gi|172041539|ref|YP_001801253.1| hypothetical protein cur_1860 [... 184 9e-45 gi|213966024|ref|ZP_03394213.1| conserved hypothetical protein [... 184 1e-44 >gi|15610798|ref|NP_218179.1| hypothetical protein Rv3662c [Mycobacterium tuberculosis H37Rv] gi|15843276|ref|NP_338313.1| hypothetical protein MT3763 [Mycobacterium tuberculosis CDC1551] gi|148663524|ref|YP_001285047.1| hypothetical protein MRA_3696 [Mycobacterium tuberculosis H37Ra] 45 more sequence titles Length=256 Score = 487 bits (1253), Expect = 9e-136, Method: Compositional matrix adjust. Identities = 255/256 (99%), Positives = 256/256 (100%), Gaps = 0/256 (0%) Query 1 VTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG 60 +TVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG Sbjct 1 MTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG 60 Query 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA 120 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA Sbjct 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA 120 Query 121 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV Sbjct 121 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 Query 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML Sbjct 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 Query 241 DGAREALSIAESLSPG 256 DGAREALSIAESLSPG Sbjct 241 DGAREALSIAESLSPG 256 >gi|339300069|gb|AEJ52179.1| hypothetical protein CCDC5180_3342 [Mycobacterium tuberculosis CCDC5180] Length=256 Score = 486 bits (1251), Expect = 1e-135, Method: Compositional matrix adjust. Identities = 254/256 (99%), Positives = 256/256 (100%), Gaps = 0/256 (0%) Query 1 VTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG 60 +TVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG Sbjct 1 MTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG 60 Query 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA 120 PARLHDAGAPTSGKPALSDPV+AGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA Sbjct 61 PARLHDAGAPTSGKPALSDPVYAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA 120 Query 121 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV Sbjct 121 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 Query 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML Sbjct 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 Query 241 DGAREALSIAESLSPG 256 DGAREALSIAESLSPG Sbjct 241 DGAREALSIAESLSPG 256 >gi|31794832|ref|NP_857325.1| hypothetical protein Mb3686c [Mycobacterium bovis AF2122/97] gi|121639575|ref|YP_979799.1| hypothetical protein BCG_3720c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224992072|ref|YP_002646761.1| hypothetical protein JTY_3721 [Mycobacterium bovis BCG str. Tokyo 172] 10 more sequence titles Length=256 Score = 485 bits (1249), Expect = 2e-135, Method: Compositional matrix adjust. Identities = 254/256 (99%), Positives = 255/256 (99%), Gaps = 0/256 (0%) Query 1 VTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG 60 +TVDPLAPLMELPGVAAASDRVRDALSRVHRHR NLRGWPVAAAEASLRAARASSVLDGG Sbjct 1 MTVDPLAPLMELPGVAAASDRVRDALSRVHRHRTNLRGWPVAAAEASLRAARASSVLDGG 60 Query 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA 120 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA Sbjct 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA 120 Query 121 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV Sbjct 121 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 Query 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML Sbjct 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 Query 241 DGAREALSIAESLSPG 256 DGAREALSIAESLSPG Sbjct 241 DGAREALSIAESLSPG 256 >gi|289748174|ref|ZP_06507552.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289688761|gb|EFD56190.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=256 Score = 484 bits (1246), Expect = 6e-135, Method: Compositional matrix adjust. Identities = 254/256 (99%), Positives = 255/256 (99%), Gaps = 0/256 (0%) Query 1 VTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG 60 +TVDPLAPLMELPGVAAASDRVRDALSRVHRHR NLRGWPVAAAEASLRAARASSVLDGG Sbjct 1 MTVDPLAPLMELPGVAAASDRVRDALSRVHRHRDNLRGWPVAAAEASLRAARASSVLDGG 60 Query 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA 120 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA Sbjct 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA 120 Query 121 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV Sbjct 121 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 Query 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML Sbjct 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 Query 241 DGAREALSIAESLSPG 256 DGAREALSIAESLSPG Sbjct 241 DGAREALSIAESLSPG 256 >gi|323717521|gb|EGB26723.1| hypothetical protein TMMG_00148 [Mycobacterium tuberculosis CDC1551A] Length=247 Score = 471 bits (1211), Expect = 6e-131, Method: Compositional matrix adjust. Identities = 247/247 (100%), Positives = 247/247 (100%), Gaps = 0/247 (0%) Query 10 MELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPARLHDAGA 69 MELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPARLHDAGA Sbjct 1 MELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPARLHDAGA 60 Query 70 PTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQVDDDRLG 129 PTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQVDDDRLG Sbjct 61 PTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQVDDDRLG 120 Query 130 RPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVARAVSRLVT 189 RPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVARAVSRLVT Sbjct 121 RPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVARAVSRLVT 180 Query 190 IATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGAREALSI 249 IATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGAREALSI Sbjct 181 IATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGAREALSI 240 Query 250 AESLSPG 256 AESLSPG Sbjct 241 AESLSPG 247 >gi|340628634|ref|YP_004747086.1| hypothetical protein MCAN_36821 [Mycobacterium canettii CIPT 140010059] gi|340006824|emb|CCC46013.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=256 Score = 432 bits (1111), Expect = 2e-119, Method: Compositional matrix adjust. Identities = 249/256 (98%), Positives = 250/256 (98%), Gaps = 0/256 (0%) Query 1 VTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG 60 +TVDPLAPLMELPGVAAASDRVRDALSR HRHRANLRGW VAAAEASLRAARASSVLDGG Sbjct 1 MTVDPLAPLMELPGVAAASDRVRDALSRAHRHRANLRGWRVAAAEASLRAARASSVLDGG 60 Query 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA 120 PARLHDAGAPTSGK ALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA Sbjct 61 PARLHDAGAPTSGKAALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA 120 Query 121 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 DQVDDDRLGRPRSDADVGPRLELLADVVT PTLASAPVVAAVAHGELLTLRPFGCADGVV Sbjct 121 DQVDDDRLGRPRSDADVGPRLELLADVVTRPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 Query 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 ARAVSRLVTIATGLDPHGLGVPEVIWMRQP EY DAARRFAGGTPDGVAGWLLLCCGAML Sbjct 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPTEYRDAARRFAGGTPDGVAGWLLLCCGAML 240 Query 241 DGAREALSIAESLSPG 256 DGAREALSIAESLSPG Sbjct 241 DGAREALSIAESLSPG 256 >gi|307081843|ref|ZP_07491013.1| hypothetical protein TMKG_00901 [Mycobacterium tuberculosis SUMu011] gi|308360497|gb|EFP49348.1| hypothetical protein TMKG_00901 [Mycobacterium tuberculosis SUMu011] Length=210 Score = 402 bits (1034), Expect = 2e-110, Method: Compositional matrix adjust. Identities = 210/210 (100%), Positives = 210/210 (100%), Gaps = 0/210 (0%) Query 47 SLRAARASSVLDGGPARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRA 106 SLRAARASSVLDGGPARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRA Sbjct 1 SLRAARASSVLDGGPARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRA 60 Query 107 PLQALARLHMLAAADQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGE 166 PLQALARLHMLAAADQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGE Sbjct 61 PLQALARLHMLAAADQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGE 120 Query 167 LLTLRPFGCADGVVARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPD 226 LLTLRPFGCADGVVARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPD Sbjct 121 LLTLRPFGCADGVVARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPD 180 Query 227 GVAGWLLLCCGAMLDGAREALSIAESLSPG 256 GVAGWLLLCCGAMLDGAREALSIAESLSPG Sbjct 181 GVAGWLLLCCGAMLDGAREALSIAESLSPG 210 >gi|289747497|ref|ZP_06506875.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289688025|gb|EFD55513.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] Length=193 Score = 373 bits (957), Expect = 2e-101, Method: Compositional matrix adjust. Identities = 192/193 (99%), Positives = 193/193 (100%), Gaps = 0/193 (0%) Query 64 LHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQV 123 +HDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQV Sbjct 1 MHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQV 60 Query 124 DDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVARA 183 DDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVARA Sbjct 61 DDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVARA 120 Query 184 VSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGA 243 VSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGA Sbjct 121 VSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGA 180 Query 244 REALSIAESLSPG 256 REALSIAESLSPG Sbjct 181 REALSIAESLSPG 193 >gi|41406511|ref|NP_959347.1| hypothetical protein MAP0413 [Mycobacterium avium subsp. paratuberculosis K-10] gi|254773474|ref|ZP_05214990.1| hypothetical protein MaviaA2_02185 [Mycobacterium avium subsp. avium ATCC 25291] gi|41394860|gb|AAS02730.1| hypothetical protein MAP_0413 [Mycobacterium avium subsp. paratuberculosis K-10] gi|48928122|gb|AAT47739.1| hypothetical protein MA3662c [Mycobacterium avium] Length=252 Score = 357 bits (916), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 202/254 (80%), Positives = 218/254 (86%), Gaps = 4/254 (1%) Query 1 VTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG 60 +T DPLAPLMELPGVA ASDR RDAL R HRHRANLRGWPV AAEA+LRAARASSVLDGG Sbjct 1 MTADPLAPLMELPGVAEASDRARDALGRAHRHRANLRGWPVTAAEAALRAARASSVLDGG 60 Query 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA 120 P RL D +G+ +SDPVFAGALRV QALEGG GPVVG+WRRAPLQALARLHMLAAA Sbjct 61 PVRLEDLA--EAGQ--ISDPVFAGALRVAQALEGGEGPVVGIWRRAPLQALARLHMLAAA 116 Query 121 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 DQVDD+RLGRPR+DA VGPRLELLAD+V T APV+AAVAHGELLTLRPFG DGVV Sbjct 117 DQVDDERLGRPRADAGVGPRLELLADLVNGRTRVPAPVLAAVAHGELLTLRPFGSCDGVV 176 Query 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 ARAVSRLVTIA+GLDPHGLGVPEV WMRQPA Y DAAR FA GTP+GV WL+LCC AM Sbjct 177 ARAVSRLVTIASGLDPHGLGVPEVSWMRQPAAYRDAARGFADGTPEGVGAWLVLCCRAMR 236 Query 241 DGAREALSIAESLS 254 GA+EALSIA+S+S Sbjct 237 AGAQEALSIADSMS 250 >gi|306801291|ref|ZP_07437959.1| hypothetical protein TMHG_02722 [Mycobacterium tuberculosis SUMu008] gi|308351905|gb|EFP40756.1| hypothetical protein TMHG_02722 [Mycobacterium tuberculosis SUMu008] Length=183 Score = 354 bits (909), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 183/183 (100%), Positives = 183/183 (100%), Gaps = 0/183 (0%) Query 74 KPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQVDDDRLGRPRS 133 KPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQVDDDRLGRPRS Sbjct 1 KPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQVDDDRLGRPRS 60 Query 134 DADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVARAVSRLVTIATG 193 DADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVARAVSRLVTIATG Sbjct 61 DADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVARAVSRLVTIATG 120 Query 194 LDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGAREALSIAESL 253 LDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGAREALSIAESL Sbjct 121 LDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGAREALSIAESL 180 Query 254 SPG 256 SPG Sbjct 181 SPG 183 >gi|342862003|ref|ZP_08718647.1| hypothetical protein MCOL_24050 [Mycobacterium colombiense CECT 3035] gi|342130543|gb|EGT83852.1| hypothetical protein MCOL_24050 [Mycobacterium colombiense CECT 3035] Length=252 Score = 352 bits (903), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 197/254 (78%), Positives = 217/254 (86%), Gaps = 4/254 (1%) Query 1 VTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG 60 +T DPLAPLMELPGVA ASDR RDAL R HRHRANLRGWPV AAEA+LRAARASSVLDGG Sbjct 1 MTADPLAPLMELPGVAEASDRARDALGRAHRHRANLRGWPVTAAEAALRAARASSVLDGG 60 Query 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA 120 P RL D +G+ +SDPVFAGALRV QALEGG GPVV +WRRAPLQALARLHMLAAA Sbjct 61 PVRLEDLA--DAGQ--ISDPVFAGALRVAQALEGGEGPVVAIWRRAPLQALARLHMLAAA 116 Query 121 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 +QVDD+RLGRPR DA +GPRLELLAD+V T APV+AAVAHGELLTL+PFG +DGVV Sbjct 117 EQVDDERLGRPRPDAGIGPRLELLADLVNGRTQVPAPVLAAVAHGELLTLKPFGSSDGVV 176 Query 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 ARAVSRLVTIA+GLDPHGLGVPEV WMRQPA Y DAAR FA GTP+GV WL+LCC AM Sbjct 177 ARAVSRLVTIASGLDPHGLGVPEVSWMRQPAAYRDAARGFADGTPEGVGAWLVLCCRAMK 236 Query 241 DGAREALSIAESLS 254 GA+EA+SIA+S+S Sbjct 237 AGAQEAVSIADSMS 250 >gi|118619404|ref|YP_907736.1| hypothetical protein MUL_4236 [Mycobacterium ulcerans Agy99] gi|118571514|gb|ABL06265.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=256 Score = 352 bits (902), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 193/253 (77%), Positives = 213/253 (85%), Gaps = 0/253 (0%) Query 1 VTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG 60 +T DPLA LMELPGV ASDR R+AL + HRHRANLRGWPV AAEA+LR ARASSVLDGG Sbjct 1 MTADPLAALMELPGVGDASDRAREALGQAHRHRANLRGWPVTAAEAALRGARASSVLDGG 60 Query 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA 120 P RL D P++G P ++DPVF GALRV QALEGGAGP+VGVW++APLQALARLHMLAAA Sbjct 61 PTRLEDLVDPSAGDPVVNDPVFGGALRVAQALEGGAGPLVGVWQKAPLQALARLHMLAAA 120 Query 121 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 D D LGRPR+DA +GPRLELLAD+VT PT ASAPV+AAVAHGELLTLRPFG ADGVV Sbjct 121 DLAADGGLGRPRADAGIGPRLELLADLVTRPTRASAPVIAAVAHGELLTLRPFGTADGVV 180 Query 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 AR VSRLVTIATGLDPHGLGVPEV WMRQP Y DAA RFA GTP G+A WL+LCC AM Sbjct 181 ARGVSRLVTIATGLDPHGLGVPEVSWMRQPVGYRDAADRFAEGTPAGLAAWLVLCCRAME 240 Query 241 DGAREALSIAESL 253 GA+EAL+IA S+ Sbjct 241 AGAQEALAIANSV 253 >gi|183985120|ref|YP_001853411.1| hypothetical protein MMAR_5150 [Mycobacterium marinum M] gi|183178446|gb|ACC43556.1| conserved hypothetical protein [Mycobacterium marinum M] Length=256 Score = 349 bits (895), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 192/253 (76%), Positives = 212/253 (84%), Gaps = 0/253 (0%) Query 1 VTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG 60 +T DPLA LMELPGV ASDR R+AL + HRHRANLRGWPV AAEA+LR ARASSVLDGG Sbjct 1 MTADPLAALMELPGVGDASDRAREALGQAHRHRANLRGWPVTAAEAALRGARASSVLDGG 60 Query 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA 120 P RL D ++G P ++DPVF GALRV QALEGGAGP+VGVW++APLQALARLHMLAAA Sbjct 61 PTRLEDLVDASAGDPVVNDPVFGGALRVAQALEGGAGPLVGVWQKAPLQALARLHMLAAA 120 Query 121 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 D D LGRPR+DA +GPRLELLAD+VT PT ASAPV+AAVAHGELLTLRPFG ADGVV Sbjct 121 DLAADGGLGRPRADAGIGPRLELLADLVTRPTRASAPVIAAVAHGELLTLRPFGTADGVV 180 Query 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 AR VSRLVTIATGLDPHGLGVPEV WMRQP Y DAA RFA GTP G+A WL+LCC AM Sbjct 181 ARGVSRLVTIATGLDPHGLGVPEVSWMRQPVGYRDAADRFAEGTPAGLAAWLVLCCRAME 240 Query 241 DGAREALSIAESL 253 GA+EAL+IA S+ Sbjct 241 AGAQEALAIANSV 253 >gi|308378428|ref|ZP_07668750.1| hypothetical protein TMIG_00010 [Mycobacterium tuberculosis SUMu009] gi|308352458|gb|EFP41309.1| hypothetical protein TMIG_00010 [Mycobacterium tuberculosis SUMu009] Length=267 Score = 346 bits (887), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 189/189 (100%), Positives = 189/189 (100%), Gaps = 0/189 (0%) Query 68 GAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQVDDDR 127 GAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQVDDDR Sbjct 79 GAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQVDDDR 138 Query 128 LGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVARAVSRL 187 LGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVARAVSRL Sbjct 139 LGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVARAVSRL 198 Query 188 VTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGAREAL 247 VTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGAREAL Sbjct 199 VTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGAREAL 258 Query 248 SIAESLSPG 256 SIAESLSPG Sbjct 259 SIAESLSPG 267 >gi|118465103|ref|YP_879750.1| hypothetical protein MAV_0468 [Mycobacterium avium 104] gi|118166390|gb|ABK67287.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336460811|gb|EGO39696.1| hypothetical protein MAPs_36320 [Mycobacterium avium subsp. paratuberculosis S397] Length=243 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 195/245 (80%), Positives = 210/245 (86%), Gaps = 4/245 (1%) Query 10 MELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPARLHDAGA 69 MELPGVA ASDR RDAL R HRHRANLRGWPV AAEA+LRAARASSVLDGGP RL D Sbjct 1 MELPGVAEASDRARDALGRAHRHRANLRGWPVTAAEAALRAARASSVLDGGPVRLEDLA- 59 Query 70 PTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQVDDDRLG 129 +G+ +SDPVFAGALRV QALEGG GPVVG+WRRAPLQALARLHMLAAADQVDD+RLG Sbjct 60 -EAGQ--ISDPVFAGALRVAQALEGGEGPVVGIWRRAPLQALARLHMLAAADQVDDERLG 116 Query 130 RPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVARAVSRLVT 189 RPR+DA VGPRLELLAD+V T APV+AAVAHGELLTLRPFG DGVVARAVSRLVT Sbjct 117 RPRADAGVGPRLELLADLVNGRTRVPAPVLAAVAHGELLTLRPFGSCDGVVARAVSRLVT 176 Query 190 IATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGAREALSI 249 IA+GLDPHGLGVPEV WMRQPA Y DAAR FA GTP+GV WL+LCC AM GA+EALSI Sbjct 177 IASGLDPHGLGVPEVSWMRQPAAYRDAARGFADGTPEGVGAWLVLCCRAMRAGAQEALSI 236 Query 250 AESLS 254 A+S+S Sbjct 237 ADSMS 241 >gi|296166717|ref|ZP_06849141.1| oxidoreductase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897887|gb|EFG77469.1| oxidoreductase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=252 Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 196/254 (78%), Positives = 220/254 (87%), Gaps = 4/254 (1%) Query 1 VTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG 60 +T DPLAPL+ELPGVA ASDR R+AL R HRHRANLRGWPV AAEA+LRAARASSVLDGG Sbjct 1 MTADPLAPLLELPGVAEASDRAREALGRAHRHRANLRGWPVTAAEAALRAARASSVLDGG 60 Query 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA 120 P RL D + A+SDPVF GALRV QALEGG GP+VG+WRRAPLQALARLHMLAAA Sbjct 61 PVRLED----LADAAAVSDPVFGGALRVAQALEGGEGPLVGIWRRAPLQALARLHMLAAA 116 Query 121 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 DQV++DRLGRPR+DA VGPRLELLA++V+ T A APVVAAVAHGELLTLRPFG ADGVV Sbjct 117 DQVEEDRLGRPRADAGVGPRLELLAELVSGGTRAPAPVVAAVAHGELLTLRPFGSADGVV 176 Query 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 ARAVSRLVTIA+GLDPHGLGVPEV WMRQPA+Y DAA+ FA G+P+GV WL+LCC A+ Sbjct 177 ARAVSRLVTIASGLDPHGLGVPEVSWMRQPADYRDAAQGFANGSPEGVGAWLVLCCRAIR 236 Query 241 DGAREALSIAESLS 254 GA+EAL+IA+SLS Sbjct 237 AGAQEALTIADSLS 250 >gi|254820852|ref|ZP_05225853.1| hypothetical protein MintA_13038 [Mycobacterium intracellulare ATCC 13950] Length=252 Score = 331 bits (849), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 195/254 (77%), Positives = 216/254 (86%), Gaps = 4/254 (1%) Query 1 VTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG 60 +T DPLAPLMELPGVA ASDR R+AL R HRHRANLRGWPV AAEA+LRAARASSVLDGG Sbjct 1 MTADPLAPLMELPGVAEASDRAREALGRAHRHRANLRGWPVTAAEAALRAARASSVLDGG 60 Query 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA 120 P RL D +GK +SDPVFAGALRV QALEGG GPVVG+WRRAPLQALARLHMLAAA Sbjct 61 PIRLEDLA--DAGK--VSDPVFAGALRVAQALEGGEGPVVGIWRRAPLQALARLHMLAAA 116 Query 121 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 DQVD + LGRPR D+ VGPRLELLA++V T A APV+AAVAHGELLTL+PFG +DGVV Sbjct 117 DQVDAEHLGRPRGDSGVGPRLELLAELVNGRTQAPAPVIAAVAHGELLTLKPFGSSDGVV 176 Query 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 ARAVSRLVTIA+GLDPHGLGVPEV WMRQPA Y DAA+ FA GT +GV WL+LCC AM Sbjct 177 ARAVSRLVTIASGLDPHGLGVPEVSWMRQPAAYRDAAQGFAEGTREGVGTWLVLCCRAMQ 236 Query 241 DGAREALSIAESLS 254 GA+EAL+IA+S+S Sbjct 237 AGAKEALAIADSMS 250 >gi|307086456|ref|ZP_07495569.1| hypothetical protein TMLG_00147 [Mycobacterium tuberculosis SUMu012] gi|308364117|gb|EFP52968.1| hypothetical protein TMLG_00147 [Mycobacterium tuberculosis SUMu012] Length=166 Score = 322 bits (824), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 166/166 (100%), Positives = 166/166 (100%), Gaps = 0/166 (0%) Query 91 ALEGGAGPVVGVWRRAPLQALARLHMLAAADQVDDDRLGRPRSDADVGPRLELLADVVTH 150 ALEGGAGPVVGVWRRAPLQALARLHMLAAADQVDDDRLGRPRSDADVGPRLELLADVVTH Sbjct 1 ALEGGAGPVVGVWRRAPLQALARLHMLAAADQVDDDRLGRPRSDADVGPRLELLADVVTH 60 Query 151 PTLASAPVVAAVAHGELLTLRPFGCADGVVARAVSRLVTIATGLDPHGLGVPEVIWMRQP 210 PTLASAPVVAAVAHGELLTLRPFGCADGVVARAVSRLVTIATGLDPHGLGVPEVIWMRQP Sbjct 61 PTLASAPVVAAVAHGELLTLRPFGCADGVVARAVSRLVTIATGLDPHGLGVPEVIWMRQP 120 Query 211 AEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGAREALSIAESLSPG 256 AEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGAREALSIAESLSPG Sbjct 121 AEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGAREALSIAESLSPG 166 >gi|15828226|ref|NP_302489.1| hypothetical protein ML2289 [Mycobacterium leprae TN] gi|221230703|ref|YP_002504119.1| hypothetical protein MLBr_02289 [Mycobacterium leprae Br4923] gi|13093919|emb|CAC31805.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933810|emb|CAR72387.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=256 Score = 321 bits (822), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 194/253 (77%), Positives = 210/253 (84%), Gaps = 0/253 (0%) Query 1 VTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG 60 +T D LAPLMELPGVA ASDR RDAL R HRHRANLRGWPV AAEA+LRAARASSVLDGG Sbjct 1 MTADLLAPLMELPGVATASDRARDALGRAHRHRANLRGWPVTAAEAALRAARASSVLDGG 60 Query 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA 120 P RL + +SDPVF GALRV QALEGGAGP+VGVW+RAPLQALARLH+LAAA Sbjct 61 PVRLDHLPGASPQAGGVSDPVFGGALRVAQALEGGAGPLVGVWQRAPLQALARLHVLAAA 120 Query 121 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 DQV D+ LGRPR DA+VG RL LL DVV+ T A+APVVAAV HGELLTL+PFG ADGVV Sbjct 121 DQVGDEWLGRPRMDAEVGLRLGLLVDVVSGRTFAAAPVVAAVVHGELLTLQPFGSADGVV 180 Query 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 ARAVSRLVTIATGLDPHGLGVPEV WMR+ A Y DAA FAGGTP GVA WL+LCC A+ Sbjct 181 ARAVSRLVTIATGLDPHGLGVPEVSWMRRAAVYRDAACGFAGGTPKGVAAWLVLCCRALH 240 Query 241 DGAREALSIAESL 253 GA+EALSIAESL Sbjct 241 AGAQEALSIAESL 253 >gi|333992584|ref|YP_004525198.1| hypothetical protein JDM601_3944 [Mycobacterium sp. JDM601] gi|333488552|gb|AEF37944.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=248 Score = 306 bits (785), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 168/252 (67%), Positives = 191/252 (76%), Gaps = 8/252 (3%) Query 1 VTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG 60 + DPLAPL+ELPGVA AS++VRD L+R HRH+ N+RGW V+AAEASLRAARASSVLDGG Sbjct 1 MITDPLAPLLELPGVADASEKVRDELARAHRHKTNVRGWAVSAAEASLRAARASSVLDGG 60 Query 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAA 120 P T + DPVFAGALRV QALEGG +V VWRRAPLQALARLH+LAAA Sbjct 61 P--------TTVDARSTGDPVFAGALRVAQALEGGENSLVEVWRRAPLQALARLHVLAAA 112 Query 121 DQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 D VD+D LGRP +VG RLELLAD+ T A APV AAV HGELLTL PFG ADGVV Sbjct 113 DLVDEDHLGRPAGGGEVGRRLELLADLAAGGTRAPAPVFAAVVHGELLTLAPFGSADGVV 172 Query 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 AR +RLVTIA+GLD HGLGVPEV WMR+ Y AA+ FAGG+ +GV WLLLCCGA+ Sbjct 173 ARGAARLVTIASGLDRHGLGVPEVHWMRKAGAYRRAAQAFAGGSTEGVTEWLLLCCGALH 232 Query 241 DGAREALSIAES 252 GA +AL IAE+ Sbjct 233 AGALDALGIAEA 244 >gi|126437759|ref|YP_001073450.1| hypothetical protein Mjls_5195 [Mycobacterium sp. JLS] gi|126237559|gb|ABO00960.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=246 Score = 300 bits (768), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 170/250 (68%), Positives = 193/250 (78%), Gaps = 8/250 (3%) Query 3 VDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPA 62 DPLAPL+ELPGVA AS+ R+AL R HRH+ NLRGWP AAEA+LRAARASSVLDGG Sbjct 2 TDPLAPLVELPGVAEASEEARNALGRAHRHKTNLRGWPATAAEAALRAARASSVLDGGSL 61 Query 63 RLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQ 122 +L D G +DPV AGALRV QALEGGA +V VW+RAPLQALARLH LAAAD Sbjct 62 QLADTGE--------ADPVLAGALRVSQALEGGATALVDVWQRAPLQALARLHSLAAADL 113 Query 123 VDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVAR 182 DD+ LGRPR+DA VG RLELL +++T + A APV+AA+AHGELLTL PFG ADGVVAR Sbjct 114 TDDEHLGRPRADAGVGKRLELLVEILTGGSRAPAPVLAAIAHGELLTLAPFGTADGVVAR 173 Query 183 AVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDG 242 VSRLVTI +GLDPHGLGVPEV WMRQ +Y AAR FA GT DG+ WLLL C A+ +G Sbjct 174 GVSRLVTITSGLDPHGLGVPEVYWMRQSGDYQAAARGFASGTADGLTAWLLLSCRALHEG 233 Query 243 AREALSIAES 252 AREAL IA + Sbjct 234 AREALQIAST 243 >gi|108801771|ref|YP_641968.1| hypothetical protein Mmcs_4808 [Mycobacterium sp. MCS] gi|119870922|ref|YP_940874.1| hypothetical protein Mkms_4894 [Mycobacterium sp. KMS] gi|108772190|gb|ABG10912.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119697011|gb|ABL94084.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=246 Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 172/250 (69%), Positives = 194/250 (78%), Gaps = 8/250 (3%) Query 3 VDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPA 62 DPLAPL+ELPGVA AS+ R+AL R HRH+ NLRGWP AAEA+LRAARASSVLDGG Sbjct 2 TDPLAPLVELPGVAEASEEARNALGRAHRHKTNLRGWPATAAEAALRAARASSVLDGGSL 61 Query 63 RLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQ 122 +L D G +DPV AGALRV QALEGGA +V VW+RAPLQALARLH LAAAD Sbjct 62 QLADTGE--------ADPVLAGALRVSQALEGGATALVDVWQRAPLQALARLHSLAAADL 113 Query 123 VDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVAR 182 DD+ LGRPR+DA VG RLELL +++T + A APV+AAVAHGELLTL PFG ADGVVAR Sbjct 114 TDDEHLGRPRADAGVGKRLELLVEILTGGSQAPAPVLAAVAHGELLTLAPFGTADGVVAR 173 Query 183 AVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDG 242 VSRLVTI +GLDPHGLGVPEV WMRQ +Y AAR FA GTPDG+ WLLL C A+ +G Sbjct 174 GVSRLVTITSGLDPHGLGVPEVYWMRQSGDYQAAARGFASGTPDGLTAWLLLSCRALHEG 233 Query 243 AREALSIAES 252 AREAL IA + Sbjct 234 AREALQIAST 243 >gi|240173382|ref|ZP_04752040.1| hypothetical protein MkanA1_28976 [Mycobacterium kansasii ATCC 12478] Length=199 Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 153/201 (77%), Positives = 169/201 (85%), Gaps = 6/201 (2%) Query 54 SSVLDGGPARLHD-AGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALA 112 S+VLDG PARL D A A T+G DPVF GALRV QALEGG G +V VW++APLQALA Sbjct 1 SAVLDGSPARLDDLAEAGTAG-----DPVFGGALRVAQALEGGGGQLVVVWQKAPLQALA 55 Query 113 RLHMLAAADQVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRP 172 RLH LAAA VDDD LGRPR+D+ +GPRLELLADV+T PT ASAPVVA+VAHGELLTL+P Sbjct 56 RLHTLAAAGLVDDDMLGRPRADSAIGPRLELLADVMTRPTRASAPVVASVAHGELLTLKP 115 Query 173 FGCADGVVARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWL 232 FG ADGVVARAVSRLVTIATGLDPHGLGVPEV WMRQPA Y D ARRFA GTPDGVA WL Sbjct 116 FGHADGVVARAVSRLVTIATGLDPHGLGVPEVSWMRQPARYRDTARRFAEGTPDGVAAWL 175 Query 233 LLCCGAMLDGAREALSIAESL 253 +LCC A+ GA+EALSIA++L Sbjct 176 VLCCRALTAGAQEALSIADAL 196 >gi|315446288|ref|YP_004079167.1| hypothetical protein Mspyr1_47920 [Mycobacterium sp. Spyr1] gi|315264591|gb|ADU01333.1| hypothetical protein Mspyr1_47920 [Mycobacterium sp. Spyr1] Length=248 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 172/251 (69%), Positives = 192/251 (77%), Gaps = 11/251 (4%) Query 4 DPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPAR 63 DPLAPL ELPGVAAA+D R+AL R HRHRANLRGWP AAEASLRAARASSVLDGG + Sbjct 6 DPLAPLTELPGVAAAADEAREALGRAHRHRANLRGWPQNAAEASLRAARASSVLDGGALQ 65 Query 64 LHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQV 123 P ++PV AGA+RV +ALEGG G +VGVWRRAPLQA+ARLH LAAAD V Sbjct 66 F---------PPDGTEPVLAGAIRVAEALEGGEGTLVGVWRRAPLQAIARLHSLAAADLV 116 Query 124 DDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVARA 183 DDD LGRPR A G RLELLAD+ T T A ++AAVAHGELLTL PFG ADGVVAR Sbjct 117 DDDALGRPREGA--GRRLELLADLATGGTRVPASILAAVAHGELLTLEPFGSADGVVARG 174 Query 184 VSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGA 243 VSRL+TIA+GLDPHGLGVPEV WMR+ +Y AAR FA GTPDG+ WLLL C + GA Sbjct 175 VSRLITIASGLDPHGLGVPEVHWMRRSNDYRAAARGFASGTPDGLTAWLLLSCEGLHAGA 234 Query 244 REALSIAESLS 254 REALSIA++ S Sbjct 235 REALSIAQAPS 245 >gi|120406371|ref|YP_956200.1| hypothetical protein Mvan_5424 [Mycobacterium vanbaalenii PYR-1] gi|119959189|gb|ABM16194.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=263 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 174/251 (70%), Positives = 192/251 (77%), Gaps = 8/251 (3%) Query 4 DPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPAR 63 DPLAPL LPGVA A + R+AL R HRHRANLRGWP +AAEASLRAARASSVLDGGP + Sbjct 20 DPLAPLTTLPGVAEAGEEAREALGRAHRHRANLRGWPKSAAEASLRAARASSVLDGGPLQ 79 Query 64 LHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQV 123 + DPV AGALRV +ALEGG G +VGVWRRAPLQA+ARLH LAAAD Sbjct 80 FANVDD--------RDPVLAGALRVAEALEGGEGALVGVWRRAPLQAIARLHALAAADLA 131 Query 124 DDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVARA 183 D D LGRPR D VG RLELLAD+VT T APV+AAVAHGELLTL PFG ADGVVARA Sbjct 132 DGDTLGRPRRDEGVGRRLELLADLVTGGTRVPAPVLAAVAHGELLTLAPFGTADGVVARA 191 Query 184 VSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGA 243 VSRL+TIA+GLDPHGLGVPEV WMR+ +Y AAR FA GTPDG+A WL+L A+ GA Sbjct 192 VSRLITIASGLDPHGLGVPEVHWMRRSGDYRAAARGFASGTPDGLAAWLVLSSEALHAGA 251 Query 244 REALSIAESLS 254 REALSIA+ S Sbjct 252 REALSIAQGAS 262 >gi|145221973|ref|YP_001132651.1| hypothetical protein Mflv_1381 [Mycobacterium gilvum PYR-GCK] gi|145214459|gb|ABP43863.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=248 Score = 271 bits (692), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 171/251 (69%), Positives = 191/251 (77%), Gaps = 11/251 (4%) Query 4 DPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPAR 63 DPLAPL ELPGVAAA+D R+AL R HRHRANLRGWP AAEASLRAARASSVLDGG + Sbjct 6 DPLAPLTELPGVAAAADEAREALGRAHRHRANLRGWPQNAAEASLRAARASSVLDGGALQ 65 Query 64 LHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQV 123 P ++PV AGA+RV +ALEGG G +VGVWRRAPLQA+ARLH LAAAD V Sbjct 66 F---------PPDGTEPVLAGAIRVAEALEGGEGTLVGVWRRAPLQAIARLHSLAAADLV 116 Query 124 DDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVARA 183 DDD LGRPR A G RLELLA + T T A ++AAVAHGELLTL PFG ADGVVAR Sbjct 117 DDDALGRPREGA--GRRLELLAALATGRTRVPASILAAVAHGELLTLEPFGSADGVVARG 174 Query 184 VSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDGA 243 VSRL+TIA+GLDPHGLGVPEV WMR+ +Y AAR FA GTPDG+ WLLL C + GA Sbjct 175 VSRLITIASGLDPHGLGVPEVHWMRRSNDYRAAARGFASGTPDGLTAWLLLSCEGLHAGA 234 Query 244 REALSIAESLS 254 REALSIA++ S Sbjct 235 REALSIAQAPS 245 >gi|169627534|ref|YP_001701183.1| hypothetical protein MAB_0430 [Mycobacterium abscessus ATCC 19977] gi|169239501|emb|CAM60529.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=247 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 150/251 (60%), Positives = 181/251 (73%), Gaps = 9/251 (3%) Query 3 VDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPA 62 DPLAPL LPGV A++ RDAL++VHRHRANLRGWPV AAEA++RAAR+SS LDGG Sbjct 2 TDPLAPLASLPGVPEAAEAARDALTKVHRHRANLRGWPVTAAEAAVRAARSSSALDGGTM 61 Query 63 RLHDAGAPTSGKPALSDPVFAGALRVGQALEGGA-GPVVGVWRRAPLQALARLHMLAAAD 121 +L S A+ DP+ AGALRVGQAL+G A + VW RAPLQALARLH+LAA Sbjct 62 KL-------SADGAVEDPILAGALRVGQALDGDALTQLAAVWSRAPLQALARLHVLAATG 114 Query 122 QVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVA 181 D+D LGRPR AD RLELLA +++ T AP++AAV HGELL L PFG ADGVVA Sbjct 115 MADEDTLGRPRPGADTD-RLELLAQLISGGTSVPAPILAAVTHGELLALNPFGSADGVVA 173 Query 182 RAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLD 241 RA SRLVT++ GLDPH LGVPEV+WMRQ Y + + FA GTP+ + W++ CC A+ Sbjct 174 RAASRLVTVSRGLDPHALGVPEVMWMRQSGRYRELSSAFAQGTPEAITAWIVFCCQALTA 233 Query 242 GAREALSIAES 252 GA EA SIA++ Sbjct 234 GAAEATSIADT 244 >gi|333917954|ref|YP_004491535.1| hypothetical protein AS9A_0276 [Amycolicicoccus subflavus DQS3-9A1] gi|333480175|gb|AEF38735.1| hypothetical protein AS9A_0276 [Amycolicicoccus subflavus DQS3-9A1] Length=252 Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 138/245 (57%), Positives = 173/245 (71%), Gaps = 9/245 (3%) Query 3 VDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPA 62 DPLAP+++LPGV ++++ RD L++ HRH AN R W +A EAS+RAARASS LDGG Sbjct 2 TDPLAPILDLPGVLDSANKARDVLTQAHRHPANRREWAKSATEASVRAARASSALDGGKT 61 Query 63 RLHDAGAPTSGKPALSDPVFAGALRVGQALEG-GAGPVVGVWRRAPLQALARLHMLAAAD 121 L +G DP+ AGA RV Q+L+G G + VW+RAPLQALARLHMLAAAD Sbjct 62 ELDPSGQ-------FEDPILAGAFRVSQSLDGEGLANMARVWQRAPLQALARLHMLAAAD 114 Query 122 QVDDDR-LGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 ++D++ LGRPR +G RL+LLA +VT + A APV AAV HGE+LTLRPFG ADGVV Sbjct 115 LIEDEQQLGRPRPVEGIGARLDLLAQLVTGGSRAPAPVTAAVVHGEILTLRPFGTADGVV 174 Query 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 ARA SRLV + +GLDPH LGVPE W+++ + Y AA F GTPDGV W++ CCGA+ Sbjct 175 ARAASRLVAVTSGLDPHNLGVPEATWLKKLSAYRSAAESFGQGTPDGVGNWVIFCCGALE 234 Query 241 DGARE 245 G RE Sbjct 235 AGGRE 239 >gi|262200529|ref|YP_003271737.1| hypothetical protein Gbro_0514 [Gordonia bronchialis DSM 43247] gi|262083876|gb|ACY19844.1| hypothetical protein Gbro_0514 [Gordonia bronchialis DSM 43247] Length=251 Score = 242 bits (618), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 148/258 (58%), Positives = 177/258 (69%), Gaps = 9/258 (3%) Query 1 VTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG 60 +T DPLAPL++LPGV A+DR RDALS VHRH ANLRGW A EAS RA R+S+ +DGG Sbjct 1 MTTDPLAPLLDLPGVRDAADRARDALSAVHRHPANLRGWDKTATEASWRAGRSSAAIDGG 60 Query 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGA-GPVVGVWRRAPLQALARLHMLAA 119 L G DP+ AGA+RV QAL+G + + V+RRAP QA ARLHMLAA Sbjct 61 SVELRRDGD-------FDDPILAGAIRVAQALDGDSLDGLTTVFRRAPAQAFARLHMLAA 113 Query 120 ADQVDD-DRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADG 178 A VDD D LGRPR+ DV RL+LL ++T T A APV+AAV HGELL L F A+G Sbjct 114 AGLVDDADDLGRPRAGDDVPGRLDLLGQLITGATSAPAPVLAAVVHGELLGLAAFPTANG 173 Query 179 VVARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGA 238 +VARA SRLV+ ATGLDPH LGVPEV W+++ AEY +R FA GTP GV W++ CC A Sbjct 174 IVARAASRLVSTATGLDPHNLGVPEVTWLKRVAEYRTLSRAFASGTPAGVGEWIVFCCEA 233 Query 239 MLDGAREALSIAESLSPG 256 + GA EA SIAE+ G Sbjct 234 LEAGAGEARSIAEAARAG 251 >gi|343926482|ref|ZP_08765987.1| hypothetical protein GOALK_060_01460 [Gordonia alkanivorans NBRC 16433] gi|343763720|dbj|GAA12913.1| hypothetical protein GOALK_060_01460 [Gordonia alkanivorans NBRC 16433] Length=272 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 150/258 (59%), Positives = 176/258 (69%), Gaps = 9/258 (3%) Query 1 VTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG 60 VT DPLAPL++LPGVA A+DR RDALS VHRH ANLRGW A EAS RA R+S+ +DGG Sbjct 22 VTNDPLAPLLDLPGVADAADRARDALSAVHRHPANLRGWDKTATEASWRAGRSSAAIDGG 81 Query 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGA-GPVVGVWRRAPLQALARLHMLAA 119 L G DP+ AGA+RV QAL+G + + GV RRAP QALARLH LAA Sbjct 82 SVELRRDGD-------FDDPILAGAMRVSQALDGESLETLTGVIRRAPAQALARLHTLAA 134 Query 120 ADQV-DDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADG 178 AD V + D LGRPR + DV RL+LL ++T T APV+AAV HGELL L+PF A+G Sbjct 135 ADLVANHDELGRPRPETDVANRLDLLGQLITGATSVPAPVLAAVVHGELLGLQPFPTANG 194 Query 179 VVARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGA 238 VVARAVSRLV ATGLDPH LGVPEV W ++ EY A FA G PDG+ WL+ CC A Sbjct 195 VVARAVSRLVGAATGLDPHCLGVPEVTWFKRAGEYRSLAAAFASGGPDGLRDWLVFCCEA 254 Query 239 MLDGAREALSIAESLSPG 256 + GA EA SIA++ G Sbjct 255 LEAGAAEAKSIADAARAG 272 >gi|326383478|ref|ZP_08205165.1| hypothetical protein SCNU_11096 [Gordonia neofelifaecis NRRL B-59395] gi|326197884|gb|EGD55071.1| hypothetical protein SCNU_11096 [Gordonia neofelifaecis NRRL B-59395] Length=249 Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 136/254 (54%), Positives = 174/254 (69%), Gaps = 10/254 (3%) Query 1 VTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG 60 ++ DPL+PL++LPGV ASDR RDA+S HRH NLR W + EAS RA RAS+ +DGG Sbjct 1 MSSDPLSPLLDLPGVREASDRARDAVSAAHRHPINLRQWDKTSREASWRAGRASAAIDGG 60 Query 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALEGGA-GPVVGVWRRAPLQALARLHMLAA 119 + + L DP+ AGA+RV Q+L+ A V V+RRAP QALARLH LAA Sbjct 61 TTDI--------SRDDLGDPIAAGAIRVAQSLDSDAIDQAVAVFRRAPAQALARLHTLAA 112 Query 120 ADQVDD-DRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADG 178 +D VDD + LGRPR++ + RL+LL ++T T A APV+AAV HGELL L PF A+G Sbjct 113 SDLVDDPELLGRPRAEPHIAQRLDLLGQLITGGTAAPAPVLAAVVHGELLVLAPFTEANG 172 Query 179 VVARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGA 238 VVARA SRLV+ TGLDPH LGVPEV W+++ EY + + +FA G PD +A W++LCC A Sbjct 173 VVARAASRLVSAMTGLDPHLLGVPEVTWLKRLGEYRELSAQFATGDPDAIAAWIVLCCDA 232 Query 239 MLDGAREALSIAES 252 M G EA SIA++ Sbjct 233 MEAGGAEATSIADA 246 >gi|296141579|ref|YP_003648822.1| hypothetical protein Tpau_3911 [Tsukamurella paurometabola DSM 20162] gi|296029713|gb|ADG80483.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=245 Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 143/252 (57%), Positives = 174/252 (70%), Gaps = 12/252 (4%) Query 3 VDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPA 62 DPL+PL +P VA A+ RDAL++VHRH AN R W A E+SLR ARAS+ LDGG Sbjct 2 TDPLSPLAAVPAVAEAASAARDALAQVHRHPANRREWRATATESSLRGARASAALDGGAV 61 Query 63 RLHDAGAPTSGKPALSDPVFAGALRVGQALEGGA-GPVVGVWRRAPLQALARLHMLAAAD 121 L S ++DPV AGA+RV QA++G + V VWRRAPLQ LARLH LAAAD Sbjct 62 EL-------SRDELITDPVLAGAMRVYQAIDGDSLDATVAVWRRAPLQVLARLHTLAAAD 114 Query 122 QVDDD--RLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGV 179 V+ D RLGRPRS A G RL LLA ++T T A APV+AAV HGELL+LRPF +DGV Sbjct 115 LVEGDAERLGRPRSGA--GERLGLLAQLITGGTQAPAPVLAAVVHGELLSLRPFEVSDGV 172 Query 180 VARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAM 239 VARA SRLVT+++GLDPH LG+PE W++ Y +AA F G DGV W++LCC A+ Sbjct 173 VARAASRLVTVSSGLDPHALGIPETTWLKFAPSYAEAADTFGLGGTDGVVAWVVLCCQAL 232 Query 240 LDGAREALSIAE 251 GAREAL++AE Sbjct 233 EAGAREALALAE 244 >gi|312138007|ref|YP_004005343.1| hypothetical protein REQ_05340 [Rhodococcus equi 103S] gi|325675230|ref|ZP_08154915.1| hypothetical protein HMPREF0724_12697 [Rhodococcus equi ATCC 33707] gi|311887346|emb|CBH46657.1| conserved hypothetical protein [Rhodococcus equi 103S] gi|325553936|gb|EGD23613.1| hypothetical protein HMPREF0724_12697 [Rhodococcus equi ATCC 33707] Length=250 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 153/249 (62%), Positives = 179/249 (72%), Gaps = 9/249 (3%) Query 3 VDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPA 62 DPL PL++LPGV A+DR RDAL VHRHR N R WP A EAS+RAARAS+ +DGG Sbjct 2 TDPLQPLLDLPGVVDAADRARDALGEVHRHRTNRRDWPKTATEASVRAARASASIDGGST 61 Query 63 RLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVV-GVWRRAPLQALARLHMLAAAD 121 L P G + DPV +GALRV QAL+G A ++ W+RAPLQALARLH+LAAAD Sbjct 62 EL-----PVPGT--VGDPVLSGALRVAQALDGEALTIILPTWQRAPLQALARLHLLAAAD 114 Query 122 QVDDD-RLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 VDD LGRPR+D VG RL++LA +VT T A APV+AAV HGELL LRPFG ADG+V Sbjct 115 LVDDAATLGRPRTDPGVGERLDMLAQLVTGGTNAPAPVLAAVVHGELLALRPFGVADGIV 174 Query 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 ARA SRLV +TGLDPH LGVPEV WMR+ Y D FA GT +GV W++LCCGA+ Sbjct 175 ARAASRLVATSTGLDPHNLGVPEVSWMRRAPAYRDGIAGFASGTAEGVGSWVILCCGALE 234 Query 241 DGAREALSI 249 GAREA+SI Sbjct 235 AGAREAMSI 243 >gi|256374419|ref|YP_003098079.1| hypothetical protein Amir_0264 [Actinosynnema mirum DSM 43827] gi|255918722|gb|ACU34233.1| hypothetical protein Amir_0264 [Actinosynnema mirum DSM 43827] Length=240 Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 141/250 (57%), Positives = 170/250 (68%), Gaps = 13/250 (5%) Query 3 VDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPA 62 DPLAPL++LPGVA A RDA+ RVHRHR NLRGW AAEAS+RAARAS+ LDGGP Sbjct 2 TDPLAPLLDLPGVADAVASARDAVFRVHRHRVNLRGWATTAAEASVRAARASAALDGGPT 61 Query 63 RLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQ 122 + P G+ ++DPV AGALRV ++L G V W+RAPLQALA+LH+LAAAD Sbjct 62 TI-----PEDGE--VTDPVLAGALRVAESL----GVVFPTWQRAPLQALAKLHVLAAADL 110 Query 123 VDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVAR 182 LGRPR V RL+LLA +VT T A P+V AV HGEL+ L PF A+GVVAR Sbjct 111 --GTELGRPRLVPGVAERLDLLAGLVTGGTSAPGPLVVAVVHGELMALTPFDTANGVVAR 168 Query 183 AVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDG 242 A SRL +IATGLDP LGVPEV +R+ +EY A F+ G P+GVA W+ C A+ G Sbjct 169 AASRLASIATGLDPKSLGVPEVWCLRRRSEYDAALHGFSTGEPEGVARWITFSCAALEAG 228 Query 243 AREALSIAES 252 AREA IA++ Sbjct 229 AREAQGIADA 238 >gi|229494790|ref|ZP_04388546.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229318286|gb|EEN84151.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=249 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 155/252 (62%), Positives = 185/252 (74%), Gaps = 9/252 (3%) Query 3 VDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPA 62 DPL PL++LPGV AA+D RDAL VHRH+ N RGWP AAEA++RAARAS+ L GG Sbjct 2 TDPLQPLVDLPGVRAAADHARDALGEVHRHKTNRRGWPTTAAEAAVRAARASASLAGGTT 61 Query 63 RLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVV-GVWRRAPLQALARLHMLAAAD 121 L PT G DP+ AGALRV QAL+G + P++ W+RAPLQALARLH+LAAAD Sbjct 62 EL-----PTEGMAG--DPILAGALRVAQALDGDSLPLMESTWKRAPLQALARLHLLAAAD 114 Query 122 QVDD-DRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 V+D D+LGRPRSD VG RL+ LA +VT T A APV+AAV HGELL L PFG ADG+V Sbjct 115 LVEDADQLGRPRSDRGVGERLDALAQLVTGGTSAPAPVLAAVVHGELLALSPFGTADGIV 174 Query 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 ARA SRLV +++GLDPH LGVPEV W+R+P Y D A FA G P GV W++LCCGA+ Sbjct 175 ARAASRLVAVSSGLDPHNLGVPEVSWLRRPQAYTDGAAGFASGNPAGVGSWVILCCGALE 234 Query 241 DGAREALSIAES 252 GAREA SIA++ Sbjct 235 AGAREATSIADA 246 >gi|226303990|ref|YP_002763948.1| hypothetical protein RER_05010 [Rhodococcus erythropolis PR4] gi|226183105|dbj|BAH31209.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=249 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 154/252 (62%), Positives = 184/252 (74%), Gaps = 9/252 (3%) Query 3 VDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPA 62 DPL PL++LPGV AA+D RDAL VHRH+ N RGWP AAEA++RAARAS+ L GG Sbjct 2 TDPLQPLVDLPGVRAAADHARDALGEVHRHKTNRRGWPTTAAEAAVRAARASASLAGGTT 61 Query 63 RLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVV-GVWRRAPLQALARLHMLAAAD 121 L P G DP+ AGALRV QAL+G + P++ W+RAPLQALARLH+LAAAD Sbjct 62 EL-----PAEGMAG--DPILAGALRVAQALDGDSLPLMESTWKRAPLQALARLHLLAAAD 114 Query 122 QVDD-DRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVV 180 V+D D+LGRPRSD VG RL+ LA +VT T A APV+AAV HGELL L PFG ADG+V Sbjct 115 LVEDADQLGRPRSDRGVGERLDALAQLVTGGTSAPAPVLAAVVHGELLALSPFGTADGIV 174 Query 181 ARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAML 240 ARA SRLV +++GLDPH LGVPEV W+R+P Y D A FA G P GV W++LCCGA+ Sbjct 175 ARAASRLVAVSSGLDPHNLGVPEVSWLRRPQAYTDGAAGFASGNPAGVGSWVILCCGALE 234 Query 241 DGAREALSIAES 252 GAREA SIA++ Sbjct 235 AGAREATSIADA 246 >gi|111021313|ref|YP_704285.1| hypothetical protein RHA1_ro04337 [Rhodococcus jostii RHA1] gi|110820843|gb|ABG96127.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=249 Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 151/251 (61%), Positives = 185/251 (74%), Gaps = 9/251 (3%) Query 4 DPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPAR 63 DPL PL++LPGV A+DR RDAL VHRH+ N RGWP AAEA++RAARAS+ LDGG Sbjct 3 DPLQPLVDLPGVREAADRARDALGAVHRHKTNRRGWPTTAAEAAVRAARASASLDGGSTE 62 Query 64 LHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVV-GVWRRAPLQALARLHMLAAADQ 122 L P G+ DP+ +GALRVGQAL+G A ++ W+RAPLQALARLH+LAAAD Sbjct 63 L-----PAPGEAG--DPILSGALRVGQALDGDALTLLQSTWQRAPLQALARLHLLAAADL 115 Query 123 VDDDRL-GRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVA 181 V+D L GRPR+ + V RL+ LA +VT T A APV+AAV HGELLTL+PFG DG+VA Sbjct 116 VEDQELLGRPRAGSGVAERLDGLAQLVTGGTAAPAPVLAAVVHGELLTLKPFGVGDGIVA 175 Query 182 RAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLD 241 RA SRLV++A+GLDPH LGVPEV W+R+ Y + A FA G P+GV W++LCCGA+ Sbjct 176 RAASRLVSVASGLDPHNLGVPEVSWLRRQQAYRNGAAAFASGEPEGVGSWVVLCCGALEA 235 Query 242 GAREALSIAES 252 GAREA SIAE+ Sbjct 236 GAREATSIAEA 246 >gi|226363657|ref|YP_002781439.1| hypothetical protein ROP_42470 [Rhodococcus opacus B4] gi|226242146|dbj|BAH52494.1| hypothetical protein [Rhodococcus opacus B4] Length=249 Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 151/251 (61%), Positives = 185/251 (74%), Gaps = 9/251 (3%) Query 4 DPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPAR 63 DPL PL++LPGV A+DR RDAL VHRH+ N RGWP AAEA++RAARAS+ LDGG Sbjct 3 DPLQPLVDLPGVREAADRARDALGAVHRHKTNRRGWPTTAAEAAVRAARASASLDGGSTE 62 Query 64 LHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVV-GVWRRAPLQALARLHMLAAADQ 122 L P G+ DP+ +GALRVGQAL+G A ++ W+RAPLQALARLH+LAAAD Sbjct 63 L-----PAPGEAG--DPILSGALRVGQALDGDALTLLQSTWQRAPLQALARLHLLAAADL 115 Query 123 VDDDRL-GRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVA 181 V+D L GRPR+ + V RL+ LA +VT T A APV+AAV HGELLTLRPFG DG+VA Sbjct 116 VEDQELLGRPRAGSGVAERLDGLAQLVTGGTAAPAPVLAAVVHGELLTLRPFGVGDGIVA 175 Query 182 RAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLD 241 RA SRLV++++GLDPH LGVPEV W+R+ Y + A FA G P+GV W++LCCGA+ Sbjct 176 RAASRLVSVSSGLDPHNLGVPEVSWLRRQQAYRNGAAAFASGEPEGVGSWVVLCCGALEA 235 Query 242 GAREALSIAES 252 GAREA SIAE+ Sbjct 236 GAREATSIAEA 246 >gi|54022320|ref|YP_116562.1| hypothetical protein nfa3560 [Nocardia farcinica IFM 10152] gi|54013828|dbj|BAD55198.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=248 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 154/251 (62%), Positives = 191/251 (77%), Gaps = 10/251 (3%) Query 4 DPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPAR 63 DPL PL++LPGV A+DR RDAL+ VHRHRANLRGWP AAEA++RAAR+S+ ++GG Sbjct 3 DPLQPLVDLPGVRDAADRARDALAAVHRHRANLRGWPTTAAEAAVRAARSSAAIEGGSTE 62 Query 64 LHDAGAPTSGKPALSDPVFAGALRVGQALEGGA-GPVVGVWRRAPLQALARLHMLAAADQ 122 + P G+ ++DP+ AG+LRVGQAL+G A + VW+RAPLQALARLH+LAAAD Sbjct 63 I-----PADGR--VADPILAGSLRVGQALDGDALRNLTAVWQRAPLQALARLHLLAAADL 115 Query 123 VDDDR-LGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVA 181 V+D++ LGRPR+D V RL+LL + T A APV+AAV HGELL LRPFG DG+VA Sbjct 116 VEDEQSLGRPRTDPGVAQRLDLLVQTL-QATHAPAPVIAAVVHGELLALRPFGSGDGIVA 174 Query 182 RAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLD 241 RA SRLVT+A+GLDPH LGVPEV W+R+ Y DAA FA G P GV GW++LCCGA+ D Sbjct 175 RAASRLVTVASGLDPHSLGVPEVFWLRRRQAYLDAAAAFATGDPSGVGGWVILCCGALED 234 Query 242 GAREALSIAES 252 GAREA SIA++ Sbjct 235 GAREATSIADA 245 >gi|134096952|ref|YP_001102613.1| hypothetical protein SACE_0338 [Saccharopolyspora erythraea NRRL 2338] gi|291006301|ref|ZP_06564274.1| hypothetical protein SeryN2_17433 [Saccharopolyspora erythraea NRRL 2338] gi|133909575|emb|CAL99687.1| hypothetical protein SACE_0338 [Saccharopolyspora erythraea NRRL 2338] Length=252 Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 137/257 (54%), Positives = 173/257 (68%), Gaps = 17/257 (6%) Query 4 DPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPAR 63 + L PL+EL GVA A R A+ VHRH AN RGWP AAEAS+RAARAS+ + GG Sbjct 5 ESLLPLLELDGVAEAVTSARAAIDEVHRHPANRRGWPTTAAEASVRAARASAAVAGGATE 64 Query 64 LHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQV 123 + P +G+ +SDP+ AGALR+ + G GP++ W+RAPLQALARLH+LAAAD V Sbjct 65 I-----PETGE--VSDPLLAGALRIAE----GMGPLLPTWQRAPLQALARLHVLAAADLV 113 Query 124 DD-DRLGRPRSDADVGPRLELLADVVTHPTLAS-----APVVAAVAHGELLTLRPFGCAD 177 +D + LGRPR+D +V RL+LLA +V + S PV+AAV HGELL L PFG AD Sbjct 114 EDKESLGRPRADREVSERLDLLARIVADSSGKSQGVIPGPVLAAVVHGELLALSPFGLAD 173 Query 178 GVVARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCG 237 GV+ARA +RL I +GLDP GL VPEV + R+ +Y AA FA G P+GV WL CC Sbjct 174 GVIARAAARLTVIGSGLDPKGLVVPEVAYFRRQGDYSAAADGFANGDPEGVGEWLHYCCR 233 Query 238 AMLDGAREALSIAESLS 254 A+ GAREA SIA+++ Sbjct 234 ALEAGAREAKSIADAVQ 250 >gi|319951116|ref|ZP_08024966.1| hypothetical protein ES5_15801 [Dietzia cinnamea P4] gi|319435219|gb|EFV90489.1| hypothetical protein ES5_15801 [Dietzia cinnamea P4] Length=252 Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 136/251 (55%), Positives = 161/251 (65%), Gaps = 10/251 (3%) Query 4 DPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPAR 63 DPLAPL LPGVA A+D RDAL+ VHRH AN RGWP AAE+ LR ARAS+ ++G R Sbjct 7 DPLAPLTALPGVAEAADTARDALAAVHRHPANRRGWPTTAAESVLRGARASAGVEGASVR 66 Query 64 LHDAGAPTSGKPALSDPVFAGALRVGQALEGGA-GPVVGVWRRAPLQALARLHMLAAAD- 121 L G P D + +GALRV L G + V VW R+PLQ LA LH+LAAA Sbjct 67 LDSDGEP--------DEILSGALRVAGELTGESLDRAVAVWTRSPLQELAHLHLLAAARP 118 Query 122 QVDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVA 181 VD LGRPR+ V RL+ LA +VT T APV+AAV GEL L PFG ADG+VA Sbjct 119 DVDPQTLGRPRAGEGVAERLQGLAGLVTGGTRVPAPVLAAVVLGELSGLAPFGSADGIVA 178 Query 182 RAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLD 241 RA RLV ++TGLDPH LGVPEV + R P Y A + GT +GVA W+L CC A+ Sbjct 179 RAAFRLVAVSTGLDPHCLGVPEVTFYRDPVAYRAAVADYMAGTEEGVAAWVLYCCKALEA 238 Query 242 GAREALSIAES 252 GAREA SIA++ Sbjct 239 GAREATSIADA 249 >gi|257057550|ref|YP_003135382.1| hypothetical protein Svir_36000 [Saccharomonospora viridis DSM 43017] gi|256587422|gb|ACU98555.1| hypothetical protein Svir_36000 [Saccharomonospora viridis DSM 43017] Length=248 Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 143/250 (58%), Positives = 166/250 (67%), Gaps = 12/250 (4%) Query 4 DPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPAR 63 DPLAPLMEL GVA A+ +DA+ VHR ANLRG AAEAS+RAARAS+ LDG Sbjct 7 DPLAPLMELGGVAEAAKSAQDAVFAVHRLPANLRGGSATAAEASVRAARASAALDGADPD 66 Query 64 LHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQV 123 L D G ++DPV AG+LRV +A E ++ WRRAPLQ LAR+H+LAAAD Sbjct 67 LPDDGV-------VADPVLAGSLRVAKATES----LLPTWRRAPLQVLARMHVLAAADLT 115 Query 124 DDDRL-GRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVAR 182 DD GRPR V PRLELLA +VT T PV+ AV HGELLTLRPFG ADGV+AR Sbjct 116 DDADALGRPRPADGVAPRLELLAQLVTGATSVPGPVLTAVVHGELLTLRPFGSADGVLAR 175 Query 183 AVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDG 242 A +RL IATGLDP L VPEV + R+ Y +AA+ FA G PDGV WLL CC A G Sbjct 176 AAARLSMIATGLDPKALTVPEVAFFRRQRRYEEAAQAFASGEPDGVRQWLLFCCEAFETG 235 Query 243 AREALSIAES 252 AREA IA++ Sbjct 236 AREAKGIADA 245 >gi|260579404|ref|ZP_05847286.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] gi|258602533|gb|EEW15828.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] Length=261 Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 129/262 (50%), Positives = 158/262 (61%), Gaps = 22/262 (8%) Query 4 DPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPAR 63 DPLA L ELPGV A + D L+R+HRH ANLRGW V AE+ LR ARAS+ LDGG R Sbjct 8 DPLAGLAELPGVPEAVTQANDHLARLHRHPANLRGWDVTGAESVLRGARASAQLDGGSPR 67 Query 64 LHDAGAPTSGKPALSDPVFAGALRVGQALE-GGAGPVVGVWRRAPLQALARLHMLAAADQ 122 L P G+ + DP+ AGALR + L G V WRRAPLQ +AR++ +A+ Sbjct 68 L-----PEDGQ--VEDPILAGALRAAELLAPDGVTETVTTWRRAPLQIIARINSVASPQM 120 Query 123 VD---------DDRL---GRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTL 170 D D GRPR D RL+LL +T T +A V++AV HGELLTL Sbjct 121 SDPAFRQKAAGDAEFLVPGRPRRSTDA--RLQLLGKFITGGTKVNATVLSAVIHGELLTL 178 Query 171 RPFGCADGVVARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAG 230 +PF A GV ARA SRL TIATGLDP GLGVPEV W R+ EY A FA GTP+GVA Sbjct 179 QPFADATGVTARACSRLATIATGLDPRGLGVPEVWWNRRRDEYQAKAEGFASGTPEGVAE 238 Query 231 WLLLCCGAMLDGAREALSIAES 252 W++ + +G+ E SIA++ Sbjct 239 WIVFHATGLSEGSLEGKSIADA 260 >gi|300790618|ref|YP_003770909.1| hypothetical protein AMED_8814 [Amycolatopsis mediterranei U32] gi|299800132|gb|ADJ50507.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340532307|gb|AEK47512.1| hypothetical protein RAM_45225 [Amycolatopsis mediterranei S699] Length=240 Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 144/253 (57%), Positives = 170/253 (68%), Gaps = 15/253 (5%) Query 3 VDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPA 62 DPL PL++L GVAAA+ +DA+ VHR ANLRG AAEAS+RAARAS+ ++G Sbjct 2 TDPLKPLLDLEGVAAAAKSAQDAVFAVHRLPANLRGGAATAAEASVRAARASAGIEGANP 61 Query 63 RLHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAADQ 122 L P G + DPV AGALRV + LE ++ WRRAPLQALARLH+LAAAD Sbjct 62 EL-----PADGT--VDDPVLAGALRVAETLE----TLLPTWRRAPLQALARLHVLAAADL 110 Query 123 VDD-DRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVA 181 VDD D LGRP S G RLELLA +VT T PV+ AV HGELL L+PFG ADGVVA Sbjct 111 VDDLDALGRPHSG---GGRLELLAQLVTGATSVPGPVLTAVVHGELLALKPFGSADGVVA 167 Query 182 RAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLD 241 RA +RL +ATGLDP L VPEV + R+ Y +AA FA GTP+GV GWLL CC A Sbjct 168 RAAARLTMVATGLDPKALSVPEVAFFRRVPRYLEAAEGFASGTPEGVRGWLLFCCEAFEA 227 Query 242 GAREALSIAESLS 254 GAREA SI+++ S Sbjct 228 GAREAKSISDAAS 240 >gi|68537060|ref|YP_251765.1| hypothetical protein jk1965 [Corynebacterium jeikeium K411] gi|68264659|emb|CAI38147.1| hypothetical protein jk1965 [Corynebacterium jeikeium K411] Length=261 Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 129/262 (50%), Positives = 158/262 (61%), Gaps = 22/262 (8%) Query 4 DPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPAR 63 DPLA L ELPGV A + D L+R+HRH ANLRGW V AE+ LR ARAS+ LDGG R Sbjct 8 DPLAGLAELPGVPEAVTQANDHLARLHRHPANLRGWDVTGAESVLRGARASAQLDGGSPR 67 Query 64 LHDAGAPTSGKPALSDPVFAGALRVGQALE-GGAGPVVGVWRRAPLQALARLHMLAAADQ 122 L P G+ + DP+ AGALR + L G V WRRAPLQ +AR++ +A+ Sbjct 68 L-----PEDGQ--VEDPILAGALRAAELLAPDGVTETVTTWRRAPLQIIARINAVASPQM 120 Query 123 VD---------DDRL---GRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTL 170 D D GRPR D RL+LL +T T +A V++AV HGELLTL Sbjct 121 SDPAFRQKAAGDAEFLVPGRPRRSTDA--RLQLLGKFITGGTKVNATVLSAVIHGELLTL 178 Query 171 RPFGCADGVVARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAG 230 +PF A GV ARA SRL TIATGLDP GLGVPEV W R+ EY A FA GTP+GVA Sbjct 179 QPFADATGVTARACSRLATIATGLDPRGLGVPEVWWNRRRDEYQAKAEGFASGTPEGVAE 238 Query 231 WLLLCCGAMLDGAREALSIAES 252 W++ + +G+ E SIA++ Sbjct 239 WIVFHATGLSEGSLEGKSIADA 260 >gi|336326572|ref|YP_004606538.1| hypothetical protein CRES_2021 [Corynebacterium resistens DSM 45100] gi|336102554|gb|AEI10374.1| hypothetical protein CRES_2021 [Corynebacterium resistens DSM 45100] Length=262 Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 120/264 (46%), Positives = 156/264 (60%), Gaps = 24/264 (9%) Query 3 VDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPA 62 VDPL PL++L GV A ++ D ++RVHRH ANL+GW V +EA LR ARAS+ LDGG Sbjct 8 VDPLQPLLKLDGVQEAVEKANDYVARVHRHPANLKGWDVTGSEAVLRGARASAQLDGGTP 67 Query 63 RLHDAGAPTSGKPALSDPVFAGALRVGQALE-GGAGPVVGVWRRAPLQALARLHMLAAAD 121 L D G + DPV AGALR + L G WRRAPLQ +A+L+ +A+ Sbjct 68 WLPDDGQ-------VDDPVLAGALRAAEMLAPDGISETQTTWRRAPLQVMAKLNSVASP- 119 Query 122 QVDDDRL-------------GRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELL 168 Q+ D+ GRP+ D RL+LL ++T T ++ V++A+ HGELL Sbjct 120 QMSDESFRQKVAGSAEFLVPGRPKQATDA--RLQLLGRLITGGTKVNSVVLSAIIHGELL 177 Query 169 TLRPFGCADGVVARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGV 228 TL PF A+GV ARA SRL TI+ GLDP GLGVPEV W R EY A FA G P GV Sbjct 178 TLEPFADANGVTARACSRLATISGGLDPRGLGVPEVWWNRHREEYAAKAAGFASGEPSGV 237 Query 229 AGWLLLCCGAMLDGAREALSIAES 252 W++ + +G+ EA SIA++ Sbjct 238 GEWIIFHATGICEGSLEAKSIADA 261 >gi|296393543|ref|YP_003658427.1| hypothetical protein Srot_1123 [Segniliparus rotundus DSM 44985] gi|296180690|gb|ADG97596.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length=234 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 115/244 (48%), Positives = 153/244 (63%), Gaps = 15/244 (6%) Query 4 DPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPAR 63 DPL+ ++ LPGVA + + +D L+ + R +LRGW AAAE S RAAR S++L+G R Sbjct 5 DPLSGVLALPGVAETASQAQDFLAALTRQ--HLRGWEKAAAETSRRAARCSALLEGASLR 62 Query 64 LHDAGAPTSGKPALSDPVFAGALRVGQALEGGAGPVVGVWRRAPLQALARLHMLAAAD-Q 122 + P DP+ AGA+RV + L G + WRRAPLQ LARLH LAAAD Sbjct 63 EREEDDP--------DPLLAGAVRVAEEL----GRLGQTWRRAPLQVLARLHTLAAADLD 110 Query 123 VDDDRLGRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGELLTLRPFGCADGVVAR 182 + ++LGRP++D +VG RL LA++V T A APV+A++AHGE+L L+PFG ADG+VAR Sbjct 111 IPVEQLGRPKADPEVGARLTALAELVAGGTQAPAPVLASIAHGEILALQPFGAADGLVAR 170 Query 183 AVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGWLLLCCGAMLDG 242 A SRL +ATG DP L +PE W+R Y +A GT DGV W+L CC +L Sbjct 171 AASRLTLVATGSDPRDLALPESFWLRSGRAYRQRLDGYAAGTQDGVRAWVLFCCQGILSS 230 Query 243 AREA 246 +A Sbjct 231 GEQA 234 >gi|334563450|ref|ZP_08516441.1| hypothetical protein CbovD2_02660 [Corynebacterium bovis DSM 20582] Length=302 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 127/274 (47%), Positives = 157/274 (58%), Gaps = 33/274 (12%) Query 2 TVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGP 61 T DPLAPL LPGV A D +D LSRVHRH ANLRG V +E LR ARAS+ LDGG Sbjct 38 TPDPLAPLAGLPGVQEAVDEAQDFLSRVHRHPANLRGHDVTGSEGVLRGARASAQLDGGT 97 Query 62 ARLHDAGAPTSGKPALSDPVFAGALRVGQALE-GGAGPVVGVWRRAPLQALARLHMLAAA 120 + P SG+ + DPV AG+LR + L G WRRAPLQ +AR++ +A+ Sbjct 98 VVI-----PESGQ--VDDPVLAGSLRAAELLAPDGITETETTWRRAPLQVMARINAVASP 150 Query 121 DQVDDDRL----------------------GRPRSDADVGPRLELLADVVTHPTLASAPV 158 + D R GRPR D RL+LLA +VT T S+ + Sbjct 151 -TMSDSRFRRIAAESGRTVTRSGPDEFPVPGRPRQSTD--QRLQLLAGLVTGGTRVSSVI 207 Query 159 VAAVAHGELLTLRPFGCADGVVARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAAR 218 ++AV HGELLTL PF A+GV ARA SRL TI+ GLDP GLGVPEV W R EY + A Sbjct 208 LSAVVHGELLTLAPFPDANGVTARACSRLATISGGLDPRGLGVPEVWWNRHRDEYAEKAE 267 Query 219 RFAGGTPDGVAGWLLLCCGAMLDGAREALSIAES 252 FA GT +GV W++ + +G EA SIA++ Sbjct 268 GFASGTVEGVGEWIIFHARGLSEGTLEAKSIADA 301 >gi|172041539|ref|YP_001801253.1| hypothetical protein cur_1860 [Corynebacterium urealyticum DSM 7109] gi|171852843|emb|CAQ05819.1| hypothetical protein cu1860 [Corynebacterium urealyticum DSM 7109] Length=267 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 115/265 (44%), Positives = 155/265 (59%), Gaps = 22/265 (8%) Query 1 VTVDPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGG 60 T DPLAPL ELPGV A +R D ++R HRH ANLRGW V +E+ LR ARAS+ LDGG Sbjct 10 FTTDPLAPLAELPGVPEAVERASDFIARAHRHPANLRGWDVTGSESVLRGARASAQLDGG 69 Query 61 PARLHDAGAPTSGKPALSDPVFAGALRVGQALE-GGAGPVVGVWRRAPLQALARLHMLAA 119 RL P G+ + DP+ AG+LR + L G W+RAP+Q +A+++ +A+ Sbjct 70 TPRL-----PEDGQ--VEDPILAGSLRAAELLAPDGIAETRTTWQRAPMQVIAKINAVAS 122 Query 120 ADQVDDDRL------------GRPRSDADVGPRLELLADVVTHPTLASAPVVAAVAHGEL 167 D++ GRP+ D RL+LL ++ T ++ V++A+ HGEL Sbjct 123 PQMSDENFRAKAAHNAEFLVPGRPKRATD--GRLQLLGSLIAGGTKVNSVVLSAIIHGEL 180 Query 168 LTLRPFGCADGVVARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDG 227 LTL PF A+GV ARA SRL TI GLDP GLGVPEV W R EY A FA G + Sbjct 181 LTLEPFADANGVTARACSRLATITGGLDPRGLGVPEVWWNRHRDEYRAKAAAFAKGGSEA 240 Query 228 VAGWLLLCCGAMLDGAREALSIAES 252 +A W++ + +G+ EA SIA++ Sbjct 241 MAEWIIFHAEGLAEGSLEAKSIADA 265 >gi|213966024|ref|ZP_03394213.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] gi|213951319|gb|EEB62712.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] Length=335 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 118/262 (46%), Positives = 154/262 (59%), Gaps = 19/262 (7%) Query 4 DPLAPLMELPGVAAASDRVRDALSRVHRHRANLRGWPVAAAEASLRAARASSVLDGGPAR 63 DPLAPL +L GVA A+D A+ VHRH+ANLR V +E+ LR ARAS+ L+GG Sbjct 81 DPLAPLWQLDGVAHAADVAAKAIQAVHRHKANLRKHNVTGSESVLRGARASAWLEGGEPS 140 Query 64 LHDAGAPTSGKPALSDPVFAGALRVGQALE-GGAGPVVGVWRRAPLQALARLHMLAA-AD 121 L D G ++DPV A ALRV + G VW+RAP Q LA+ + A+ A Sbjct 141 LPDDGN-------ITDPVLAAALRVADTISPESIGETTRVWQRAPQQVLAKFALNASPAG 193 Query 122 QVDDD-----RLGRPRSDADVGP-----RLELLADVVTHPTLASAPVVAAVAHGELLTLR 171 + +D + GRP D + RL +L D +T + A V++A+ HGELLTLR Sbjct 194 ETEDGSEARMKAGRPVGDDKLSSAMKEQRLHVLGDFITGRSQVHAGVLSAIVHGELLTLR 253 Query 172 PFGCADGVVARAVSRLVTIATGLDPHGLGVPEVIWMRQPAEYHDAARRFAGGTPDGVAGW 231 PF +G++ARA SRL T+ATGLDP GL VPEV W R EY +AA FA G+ DG+ W Sbjct 254 PFEYHNGIIARAASRLTTVATGLDPRGLAVPEVYWTRHRQEYFEAAEGFASGSADGLRAW 313 Query 232 LLLCCGAMLDGAREALSIAESL 253 +LL + GA EA IAE++ Sbjct 314 ILLHLEGLKAGAVEARGIAEAV 335 Lambda K H 0.320 0.136 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 377837056800 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40