BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3665c Length=308 Score E Sequences producing significant alignments: (Bits) Value gi|15610801|ref|NP_218182.1| peptide ABC transporter transmembra... 587 7e-166 gi|339300072|gb|AEJ52182.1| peptide ABC transporter transmembran... 585 3e-165 gi|340628637|ref|YP_004747089.1| putative dipeptide-transport in... 580 1e-163 gi|254820849|ref|ZP_05225850.1| hypothetical protein MintA_13023... 545 3e-153 gi|41406508|ref|NP_959344.1| hypothetical protein MAP0410 [Mycob... 538 3e-151 gi|118465332|ref|YP_879747.1| ABC transporter permease [Mycobact... 537 8e-151 gi|342862000|ref|ZP_08718644.1| putative dipeptide-transport int... 526 1e-147 gi|183985123|ref|YP_001853414.1| dipeptide-transport integral me... 515 3e-144 gi|118619407|ref|YP_907739.1| dipeptide-transport integral membr... 511 5e-143 gi|296166720|ref|ZP_06849144.1| dipeptide ABC superfamily ATP bi... 510 1e-142 gi|240172665|ref|ZP_04751324.1| putative dipeptide-transport int... 498 5e-139 gi|289571903|ref|ZP_06452130.1| peptide ABC transporter [Mycobac... 446 2e-123 gi|226363654|ref|YP_002781436.1| ABC transporter permease protei... 440 2e-121 gi|229494791|ref|ZP_04388547.1| oligopeptide transport system pe... 435 3e-120 gi|226303987|ref|YP_002763945.1| ABC transporter permease protei... 435 5e-120 gi|111021310|ref|YP_704282.1| peptide ABC transporter permease [... 418 5e-115 gi|340793519|ref|YP_004758982.1| hypothetical protein CVAR_0559 ... 403 2e-110 gi|269795899|ref|YP_003315354.1| peptide ABC transporter permeas... 401 8e-110 gi|116671367|ref|YP_832300.1| binding-protein-dependent transpor... 397 8e-109 gi|296141582|ref|YP_003648825.1| binding-protein-dependent trans... 395 4e-108 gi|312138004|ref|YP_004005340.1| oligopeptide/dipeptide ABC tran... 394 1e-107 gi|119962653|ref|YP_948514.1| ABC-type dipeptide/oligopeptide tr... 394 1e-107 gi|227548450|ref|ZP_03978499.1| dipeptide ABC superfamily ATP bi... 393 2e-107 gi|259507500|ref|ZP_05750400.1| peptide ABC superfamily ATP bind... 390 1e-106 gi|337290429|ref|YP_004629450.1| hypothetical protein CULC22_008... 390 1e-106 gi|213965388|ref|ZP_03393584.1| oligopeptide transport system pe... 389 3e-106 gi|19553195|ref|NP_601197.1| ABC-type transporter, permease comp... 389 5e-106 gi|25028441|ref|NP_738495.1| putative peptide ABC transporter pe... 388 6e-106 gi|145295895|ref|YP_001138716.1| hypothetical protein cgR_1820 [... 388 7e-106 gi|227487767|ref|ZP_03918083.1| dipeptide/oligopeptide ABC super... 387 1e-105 gi|300858178|ref|YP_003783161.1| hypothetical protein cpfrc_0076... 386 2e-105 gi|325067459|ref|ZP_08126132.1| dipeptide/oligopeptide/nickel AB... 383 2e-104 gi|227505660|ref|ZP_03935709.1| dipeptide/oligopeptide/nickel (N... 383 2e-104 gi|326772216|ref|ZP_08231501.1| dipeptide ABC transporter, perme... 382 3e-104 gi|343523684|ref|ZP_08760645.1| ABC transporter, permease protei... 382 4e-104 gi|329944136|ref|ZP_08292395.1| ABC transporter, permease protei... 380 1e-103 gi|152965094|ref|YP_001360878.1| ABC transporter inner membrane ... 380 1e-103 gi|88856132|ref|ZP_01130793.1| ABC transporter, permease protein... 379 2e-103 gi|334336454|ref|YP_004541606.1| ABC-type transporter, integral ... 379 3e-103 gi|38233553|ref|NP_939320.1| putative peptide transport system m... 379 4e-103 gi|315654658|ref|ZP_07907564.1| dipeptide ABC superfamily ATP bi... 377 9e-103 gi|227832044|ref|YP_002833751.1| iron ABC transport system, perm... 376 2e-102 gi|317506676|ref|ZP_07964464.1| inner membrane transporter [Segn... 376 3e-102 gi|307700665|ref|ZP_07637693.1| putative dipeptide ABC transport... 375 3e-102 gi|269976781|ref|ZP_06183756.1| dipeptide ABC transporter, perme... 375 4e-102 gi|340360826|ref|ZP_08683291.1| dipeptide ABC superfamily ATP bi... 374 9e-102 gi|306818092|ref|ZP_07451823.1| dipeptide ABC superfamily ATP bi... 374 1e-101 gi|237784725|ref|YP_002905430.1| ABC transporter permease [Coryn... 372 3e-101 gi|334564087|ref|ZP_08517078.1| ABC transporter permease protein... 372 3e-101 gi|296118079|ref|ZP_06836661.1| peptide ABC transporter, permeas... 372 4e-101 >gi|15610801|ref|NP_218182.1| peptide ABC transporter transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|15843279|ref|NP_338316.1| peptide ABC transporter, permease protein [Mycobacterium tuberculosis CDC1551] gi|31794835|ref|NP_857328.1| peptide ABC transporter transmembrane protein [Mycobacterium bovis AF2122/97] 75 more sequence titles Length=308 Score = 587 bits (1514), Expect = 7e-166, Method: Compositional matrix adjust. Identities = 308/308 (100%), Positives = 308/308 (100%), Gaps = 0/308 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD Sbjct 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA Sbjct 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI Sbjct 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD Sbjct 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA Sbjct 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 Query 301 LDPRIRYG 308 LDPRIRYG Sbjct 301 LDPRIRYG 308 >gi|339300072|gb|AEJ52182.1| peptide ABC transporter transmembrane protein [Mycobacterium tuberculosis CCDC5180] Length=308 Score = 585 bits (1507), Expect = 3e-165, Method: Compositional matrix adjust. Identities = 307/308 (99%), Positives = 307/308 (99%), Gaps = 0/308 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD Sbjct 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA Sbjct 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI Sbjct 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD Sbjct 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 LGALM GAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA Sbjct 241 LGALMDGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 Query 301 LDPRIRYG 308 LDPRIRYG Sbjct 301 LDPRIRYG 308 >gi|340628637|ref|YP_004747089.1| putative dipeptide-transport integral membrane protein ABC transporter DPPB [Mycobacterium canettii CIPT 140010059] gi|340006827|emb|CCC46016.1| putative dipeptide-transport integral membrane protein ABC transporter DPPB [Mycobacterium canettii CIPT 140010059] Length=308 Score = 580 bits (1494), Expect = 1e-163, Method: Compositional matrix adjust. Identities = 305/308 (99%), Positives = 305/308 (99%), Gaps = 0/308 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 MGWYVA RVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLT AVAAQLRSHYHLDD Sbjct 1 MGWYVACRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTSAVAAQLRSHYHLDD 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA Sbjct 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFL QFLFGVQLEIAPVTVGERASVGRLLLPGI Sbjct 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLVQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD Sbjct 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA Sbjct 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 Query 301 LDPRIRYG 308 LDPRIRYG Sbjct 301 LDPRIRYG 308 >gi|254820849|ref|ZP_05225850.1| hypothetical protein MintA_13023 [Mycobacterium intracellulare ATCC 13950] Length=308 Score = 545 bits (1405), Expect = 3e-153, Method: Compositional matrix adjust. Identities = 279/308 (91%), Positives = 300/308 (98%), Gaps = 0/308 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 MGWY+ARR+AVMVPVFLGATLLIYGMVFLLPGDP+AA+AGDRPLTPAVAAQLR+ YHLDD Sbjct 1 MGWYIARRIAVMVPVFLGATLLIYGMVFLLPGDPLAAIAGDRPLTPAVAAQLRARYHLDD 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PF+VQYLRYLGG+LHGDLGRAYSGLPVS VLAHAFPVT+RL+LIALAVEAVLGIGFG+IA Sbjct 61 PFIVQYLRYLGGVLHGDLGRAYSGLPVSDVLAHAFPVTLRLSLIALAVEAVLGIGFGLIA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLR GG+FDS VL+TGLVIIAIPIFVLGFLAQF+FGV+L IAPVTVG+RA+ RLLLPGI Sbjct 121 GLRAGGLFDSTVLITGLVIIAIPIFVLGFLAQFVFGVRLGIAPVTVGQRATFTRLLLPGI 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLG++SFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD Sbjct 181 VLGSVSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 LGALMGGAIVTEGIFNIHG+GGVLYQAVTRQE PTVVSIVTVLVLIYL+TNL+VDLLYAA Sbjct 241 LGALMGGAIVTEGIFNIHGIGGVLYQAVTRQEAPTVVSIVTVLVLIYLLTNLMVDLLYAA 300 Query 301 LDPRIRYG 308 LDPRIRYG Sbjct 301 LDPRIRYG 308 >gi|41406508|ref|NP_959344.1| hypothetical protein MAP0410 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394857|gb|AAS02727.1| DppB [Mycobacterium avium subsp. paratuberculosis K-10] gi|336460814|gb|EGO39699.1| ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Mycobacterium avium subsp. paratuberculosis S397] Length=308 Score = 538 bits (1387), Expect = 3e-151, Method: Compositional matrix adjust. Identities = 278/308 (91%), Positives = 296/308 (97%), Gaps = 0/308 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 MGWY+ARR+AVMVPVFLGATLLIY MVFLLPGDPVAA+AGDRPLTPAVAA LR+ YHLDD Sbjct 1 MGWYIARRIAVMVPVFLGATLLIYAMVFLLPGDPVAAIAGDRPLTPAVAAALRARYHLDD 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PFLVQYLRYLGG+L GDLGRAYSGLPVS VLAHAFPVT+RL+LIALAVEAVLGIGFGVIA Sbjct 61 PFLVQYLRYLGGVLRGDLGRAYSGLPVSDVLAHAFPVTLRLSLIALAVEAVLGIGFGVIA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLRQGG+FDSAVL+TGLVIIA+PIFVLGFLAQF+FGV+L IAPVTVG A+ RLLLPGI Sbjct 121 GLRQGGLFDSAVLITGLVIIAVPIFVLGFLAQFVFGVRLGIAPVTVGNAATFTRLLLPGI 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLG++SFAYVVRLTRSAVAANAHADYVRTATAKGLS+PRVVTVHILRNSLIPVVTFLGAD Sbjct 181 VLGSVSFAYVVRLTRSAVAANAHADYVRTATAKGLSQPRVVTVHILRNSLIPVVTFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQE PTVVSIVTVLVLIYL+TNL+VDLLYA Sbjct 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVLIYLVTNLVVDLLYAV 300 Query 301 LDPRIRYG 308 LDPRIRYG Sbjct 301 LDPRIRYG 308 >gi|118465332|ref|YP_879747.1| ABC transporter permease [Mycobacterium avium 104] gi|254773471|ref|ZP_05214987.1| ABC transporter, permease protein DppB [Mycobacterium avium subsp. avium ATCC 25291] gi|118166619|gb|ABK67516.1| ABC transporter, permease protein DppB [Mycobacterium avium 104] Length=308 Score = 537 bits (1384), Expect = 8e-151, Method: Compositional matrix adjust. Identities = 277/308 (90%), Positives = 294/308 (96%), Gaps = 0/308 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 MGWY+ARR+AVMVPVFLGATLLIY MVFLLPGDPVAA+AGDRPLTPAVAA LR+ YHLDD Sbjct 1 MGWYIARRIAVMVPVFLGATLLIYAMVFLLPGDPVAAIAGDRPLTPAVAAALRARYHLDD 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PFLVQYLRYLGG+L GDLGRAYSGLPVS VLAHAFPVT+RL+LIALAVEAVLGIGFGVIA Sbjct 61 PFLVQYLRYLGGVLRGDLGRAYSGLPVSDVLAHAFPVTLRLSLIALAVEAVLGIGFGVIA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLRQGG+FDSAVL+TGLVIIA+PIFVLGFLAQF+FGV+L IAPVTVG A+ RLLLPGI Sbjct 121 GLRQGGLFDSAVLITGLVIIAVPIFVLGFLAQFVFGVRLGIAPVTVGNAATFTRLLLPGI 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLG++SFAYVVRLTRS VA NAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD Sbjct 181 VLGSVSFAYVVRLTRSTVAVNAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQE PTVVSIVTVLVLIYL+TNL+VDLLYA Sbjct 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVLIYLVTNLVVDLLYAV 300 Query 301 LDPRIRYG 308 LDPRIRYG Sbjct 301 LDPRIRYG 308 >gi|342862000|ref|ZP_08718644.1| putative dipeptide-transport integral membrane protein ABC transporter DPPB [Mycobacterium colombiense CECT 3035] gi|342130540|gb|EGT83849.1| putative dipeptide-transport integral membrane protein ABC transporter DPPB [Mycobacterium colombiense CECT 3035] Length=308 Score = 526 bits (1356), Expect = 1e-147, Method: Compositional matrix adjust. Identities = 278/308 (91%), Positives = 300/308 (98%), Gaps = 0/308 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 MGWY+ARR+AVMVPVFLGATLLIYGMVFLLPGDP+AA+AGDRPLTPAVAA LR+ YHLDD Sbjct 1 MGWYIARRIAVMVPVFLGATLLIYGMVFLLPGDPLAAIAGDRPLTPAVAAALRARYHLDD 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PF+VQYLRYLGG++HGDLGRAYSGLPVSAVLAHAFPVT+RLALIAL VEAVLG+GFGVI+ Sbjct 61 PFIVQYLRYLGGVVHGDLGRAYSGLPVSAVLAHAFPVTLRLALIALVVEAVLGVGFGVIS 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLRQGG+FD+ VL+ GL+IIAIPIFVLGFLAQFLFGV+L +APVTVGERAS+ RLLLPGI Sbjct 121 GLRQGGLFDATVLIAGLIIIAIPIFVLGFLAQFLFGVKLGVAPVTVGERASLARLLLPGI 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLG++SFAY+VRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD Sbjct 181 VLGSVSFAYIVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQE PTVVSIVTVLVLIYL+TNLLVDLLYAA Sbjct 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVLIYLVTNLLVDLLYAA 300 Query 301 LDPRIRYG 308 LDPRIRYG Sbjct 301 LDPRIRYG 308 >gi|183985123|ref|YP_001853414.1| dipeptide-transport integral membrane protein ABC transporter DppB [Mycobacterium marinum M] gi|183178449|gb|ACC43559.1| dipeptide-transport integral membrane protein ABC transporter DppB [Mycobacterium marinum M] Length=308 Score = 515 bits (1327), Expect = 3e-144, Method: Compositional matrix adjust. Identities = 275/308 (90%), Positives = 295/308 (96%), Gaps = 0/308 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 M WYVARR+ MVPVFLGATLLIYGMVFLLPGDP+AA+AGDRPLTPAVA QLR+ YHLDD Sbjct 1 MVWYVARRILAMVPVFLGATLLIYGMVFLLPGDPLAAIAGDRPLTPAVAQQLRARYHLDD 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PFLVQY YLGG+LHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA Sbjct 61 PFLVQYAHYLGGVLHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLRQGGIFD+ VL+TGL+IIA+PIFVLGFLAQ+LFGV+L +APVTVG R ++ RLLLPG+ Sbjct 121 GLRQGGIFDATVLLTGLIIIAVPIFVLGFLAQYLFGVRLGLAPVTVGARTTLDRLLLPGM 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLGA+SFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD Sbjct 181 VLGAVSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 LGALMGGA+VTEGIFNIHGVGGVLYQAVTRQE PTVVSIVTVLV++YL+TNLLVDLLYAA Sbjct 241 LGALMGGAVVTEGIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVMVYLLTNLLVDLLYAA 300 Query 301 LDPRIRYG 308 LDPRIRYG Sbjct 301 LDPRIRYG 308 >gi|118619407|ref|YP_907739.1| dipeptide-transport integral membrane protein ABC transporter DppB [Mycobacterium ulcerans Agy99] gi|118571517|gb|ABL06268.1| dipeptide-transport integral membrane protein ABC transporter DppB [Mycobacterium ulcerans Agy99] Length=308 Score = 511 bits (1316), Expect = 5e-143, Method: Compositional matrix adjust. Identities = 274/308 (89%), Positives = 293/308 (96%), Gaps = 0/308 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 M WYVARR+ MVPVFLGATLLIYGMVFLLPGDP+AA+AGDRPLTPAVA QLR+ YHLDD Sbjct 1 MVWYVARRILAMVPVFLGATLLIYGMVFLLPGDPLAAIAGDRPLTPAVAQQLRARYHLDD 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PFLVQY YLGG+LHGDLGRAYSGLPVSAVLAHAFPVTIRLA IALAVEAVLGIGFGVIA Sbjct 61 PFLVQYAHYLGGVLHGDLGRAYSGLPVSAVLAHAFPVTIRLAWIALAVEAVLGIGFGVIA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLRQGGIFD+ VL+TGL+IIA PIFVLGFLAQ+LFGV+L +APVTVG R ++ RLLLPG+ Sbjct 121 GLRQGGIFDATVLLTGLIIIAAPIFVLGFLAQYLFGVRLGLAPVTVGARTTLDRLLLPGM 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLGA+SFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD Sbjct 181 VLGAVSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 LGALMGGA+VTEGIFNIHGVGGVLYQAVTRQE PTVVSIVTVLV++YL+TNLLVDLLYAA Sbjct 241 LGALMGGAVVTEGIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVMVYLLTNLLVDLLYAA 300 Query 301 LDPRIRYG 308 LDPRIRYG Sbjct 301 LDPRIRYG 308 >gi|296166720|ref|ZP_06849144.1| dipeptide ABC superfamily ATP binding cassette transporter, permease protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897890|gb|EFG77472.1| dipeptide ABC superfamily ATP binding cassette transporter, permease protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=308 Score = 510 bits (1313), Expect = 1e-142, Method: Compositional matrix adjust. Identities = 275/308 (90%), Positives = 296/308 (97%), Gaps = 0/308 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 MG Y+ARR+AVMVPVFLGATLLIYGMVFLLPGDPVAA+AGDRPLTP VAAQLR+ YHLDD Sbjct 1 MGSYIARRIAVMVPVFLGATLLIYGMVFLLPGDPVAAMAGDRPLTPEVAAQLRARYHLDD 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PF+VQYLRYLGG+LHGDLGR+YSGLPVS VLAHAFPVT+RLALIALAVEAVLGIGFGVIA Sbjct 61 PFVVQYLRYLGGVLHGDLGRSYSGLPVSDVLAHAFPVTLRLALIALAVEAVLGIGFGVIA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLR GG+FD+ VL+ GLVIIA+PIFVLGFLAQF+FGV+L IAPVTVGER++ GRLLLPGI Sbjct 121 GLRTGGLFDAGVLIAGLVIIAVPIFVLGFLAQFVFGVRLGIAPVTVGERSTFGRLLLPGI 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLG++SFAYVVRLTRSAVAANAHAD+VRTATAKGLSRPRVV VHILRNSLIPVVTFLGAD Sbjct 181 VLGSVSFAYVVRLTRSAVAANAHADHVRTATAKGLSRPRVVMVHILRNSLIPVVTFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQE PTVVSIVTVLVL+YL+TNL VDLLYAA Sbjct 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVLVYLVTNLAVDLLYAA 300 Query 301 LDPRIRYG 308 LDPRIRYG Sbjct 301 LDPRIRYG 308 >gi|240172665|ref|ZP_04751324.1| putative dipeptide-transport integral membrane protein ABC transporter [Mycobacterium kansasii ATCC 12478] Length=308 Score = 498 bits (1282), Expect = 5e-139, Method: Compositional matrix adjust. Identities = 277/308 (90%), Positives = 296/308 (97%), Gaps = 0/308 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 MGWY+ RR+A MVPVFLGATLLIY MVFLLPGDP+AA+AGDRPLTPAVAAQLR+ YHLDD Sbjct 1 MGWYLVRRIAAMVPVFLGATLLIYAMVFLLPGDPLAAMAGDRPLTPAVAAQLRARYHLDD 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PFLVQYLRYLGG+LHGDLGRAYSGLPVS+VLAHAFPVTIRLALIAL VEAVLGIGFGVIA Sbjct 61 PFLVQYLRYLGGLLHGDLGRAYSGLPVSSVLAHAFPVTIRLALIALVVEAVLGIGFGVIA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLRQGG+FD++VL+TGL+IIA+PIFVLGFLAQFLFGV+L +APVTVG RA+ GRLLLPGI Sbjct 121 GLRQGGLFDASVLITGLIIIAVPIFVLGFLAQFLFGVKLGLAPVTVGGRATFGRLLLPGI 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLGA+SFAYVVRLTRSAVAANA ADYVRTATAKGLSRPRVV VHILRNSLIPVVTFLGAD Sbjct 181 VLGAVSFAYVVRLTRSAVAANADADYVRTATAKGLSRPRVVAVHILRNSLIPVVTFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQE PTVVSIVTVLV++YLITNL VDLLYAA Sbjct 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQEAPTVVSIVTVLVVVYLITNLAVDLLYAA 300 Query 301 LDPRIRYG 308 LDPRIRYG Sbjct 301 LDPRIRYG 308 >gi|289571903|ref|ZP_06452130.1| peptide ABC transporter [Mycobacterium tuberculosis T17] gi|289545657|gb|EFD49305.1| peptide ABC transporter [Mycobacterium tuberculosis T17] Length=262 Score = 446 bits (1148), Expect = 2e-123, Method: Compositional matrix adjust. Identities = 233/233 (100%), Positives = 233/233 (100%), Gaps = 0/233 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD Sbjct 30 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 89 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA Sbjct 90 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 149 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI Sbjct 150 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 209 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPV 233 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPV Sbjct 210 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPV 262 >gi|226363654|ref|YP_002781436.1| ABC transporter permease protein [Rhodococcus opacus B4] gi|226242143|dbj|BAH52491.1| putative ABC transporter permease protein [Rhodococcus opacus B4] Length=308 Score = 440 bits (1131), Expect = 2e-121, Method: Compositional matrix adjust. Identities = 222/307 (73%), Positives = 256/307 (84%), Gaps = 0/307 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 M WYV RR+ M+PVFLGAT LIY MVFLLPGDP+AALAGD+ L+PAVAAQLR+ YHLD Sbjct 1 MLWYVGRRLLQMIPVFLGATFLIYAMVFLLPGDPIAALAGDKALSPAVAAQLRARYHLDQ 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PFL+QY YL GI D G ++SG PVS VLA AFP+TI+L+L+ALA+E + GIGFG+ A Sbjct 61 PFLMQYFLYLKGIFTLDFGTSFSGRPVSEVLAQAFPITIKLSLMALAIEGIFGIGFGLFA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLR+GGIFDS+VL+ LVIIAIPIFV+GFLAQF GV+ + P TVG S LLLP Sbjct 121 GLRKGGIFDSSVLLVSLVIIAIPIFVIGFLAQFFIGVKWGLVPPTVGGNTSFKNLLLPAF 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLG++SFAYV+RLTR++VA N ADYVRTATAKGLSR RVV VH+LRNSLIPVVTFLGAD Sbjct 181 VLGSVSFAYVLRLTRTSVAENLTADYVRTATAKGLSRRRVVQVHVLRNSLIPVVTFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 L LMGGAIVTEGIFNI+GVGG +YQAVTR E PTVVS VTVL++IYL+ NL+VDLLYAA Sbjct 241 LATLMGGAIVTEGIFNINGVGGTIYQAVTRGEAPTVVSFVTVLIVIYLLANLIVDLLYAA 300 Query 301 LDPRIRY 307 LDPRIRY Sbjct 301 LDPRIRY 307 >gi|229494791|ref|ZP_04388547.1| oligopeptide transport system permease protein OppB [Rhodococcus erythropolis SK121] gi|229318287|gb|EEN84152.1| oligopeptide transport system permease protein OppB [Rhodococcus erythropolis SK121] Length=308 Score = 435 bits (1119), Expect = 3e-120, Method: Compositional matrix adjust. Identities = 223/307 (73%), Positives = 253/307 (83%), Gaps = 0/307 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 M WY+ RRV M+PVFLGATLLIY MVFLLPGDP+AALAGD+ L+PAVAAQLR YHLD Sbjct 1 MLWYIGRRVLQMIPVFLGATLLIYAMVFLLPGDPIAALAGDKALSPAVAAQLRERYHLDL 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PF QYL YL GI D G ++SG PVS VLA AFP+T++LA +AL VE V G+GFG+IA Sbjct 61 PFYQQYLLYLKGIFTLDFGTSFSGRPVSEVLAQAFPITMKLAFMALIVETVFGVGFGLIA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLR+GG FDS VL+ LV+IAIPIFV+GFLAQF GV+ I P TVG S LLLP + Sbjct 121 GLRKGGFFDSTVLLFSLVLIAIPIFVIGFLAQFFIGVKWGIVPPTVGGNTSFKNLLLPAL 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLG++SFAYV+RLTR++VA N ADYVRTATAKGLSR RVV VH+LRNSLIPVVTFLGAD Sbjct 181 VLGSVSFAYVLRLTRTSVAENLSADYVRTATAKGLSRGRVVRVHVLRNSLIPVVTFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 L LMGGAIVTEGIFNI+GVGG +YQAVTR E PTVVS VT+L++IYLI NLLVDLLYAA Sbjct 241 LATLMGGAIVTEGIFNINGVGGTIYQAVTRGEAPTVVSFVTILIVIYLIANLLVDLLYAA 300 Query 301 LDPRIRY 307 LDPRIRY Sbjct 301 LDPRIRY 307 >gi|226303987|ref|YP_002763945.1| ABC transporter permease protein [Rhodococcus erythropolis PR4] gi|226183102|dbj|BAH31206.1| putative ABC transporter permease protein [Rhodococcus erythropolis PR4] Length=308 Score = 435 bits (1118), Expect = 5e-120, Method: Compositional matrix adjust. Identities = 223/307 (73%), Positives = 253/307 (83%), Gaps = 0/307 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 M WY+ RRV M+PVFLGATLLIY MVFLLPGDP+AALAGD+ L+PAVAAQLR YHLD Sbjct 1 MLWYIGRRVLQMIPVFLGATLLIYAMVFLLPGDPIAALAGDKALSPAVAAQLRERYHLDL 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PF QYL YL GI D G ++SG PVS VLA AFP+T++LA +AL VE V G+GFG+IA Sbjct 61 PFYQQYLLYLKGIFTLDFGTSFSGRPVSEVLAQAFPITMKLAFMALIVETVFGVGFGLIA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLR+GG FDS VL+ LV+IAIPIFV+GFLAQF GV+ I P TVG S LLLP + Sbjct 121 GLRKGGFFDSTVLLFSLVLIAIPIFVIGFLAQFFIGVKWGIVPPTVGGNTSFTNLLLPAL 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLG++SFAYV+RLTR++VA N ADYVRTATAKGLSR RVV VH+LRNSLIPVVTFLGAD Sbjct 181 VLGSVSFAYVLRLTRTSVAENLTADYVRTATAKGLSRGRVVRVHVLRNSLIPVVTFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 L LMGGAIVTEGIFNI+GVGG +YQAVTR E PTVVS VT+L++IYLI NLLVDLLYAA Sbjct 241 LATLMGGAIVTEGIFNINGVGGTIYQAVTRGEAPTVVSFVTILIVIYLIANLLVDLLYAA 300 Query 301 LDPRIRY 307 LDPRIRY Sbjct 301 LDPRIRY 307 >gi|111021310|ref|YP_704282.1| peptide ABC transporter permease [Rhodococcus jostii RHA1] gi|110820840|gb|ABG96124.1| ABC peptide transporter, permease component [Rhodococcus jostii RHA1] Length=308 Score = 418 bits (1075), Expect = 5e-115, Method: Compositional matrix adjust. Identities = 221/307 (72%), Positives = 255/307 (84%), Gaps = 0/307 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 M WYV RR+ M+PVFLGAT LIY MVFLLPGDP+AALAGD+ L+PAVAAQLR YHLD+ Sbjct 1 MLWYVGRRLLQMIPVFLGATFLIYAMVFLLPGDPIAALAGDKALSPAVAAQLRERYHLDE 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PFL QYL YL GI D G ++SG VS VLA AFP+TI+L+L+ALA+E + G+GFG+ A Sbjct 61 PFLTQYLLYLKGIFTLDFGTSFSGRAVSEVLAQAFPITIKLSLMALAIEGIFGVGFGLWA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLR+GGIFDS+VL+ L+IIAIPIFV+GFLAQF GV+ + P TVG S LLLP Sbjct 121 GLRKGGIFDSSVLLVSLLIIAIPIFVIGFLAQFFVGVKWGLVPPTVGGNTSFKNLLLPAF 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLG++SFAYV+RLTR++VA N ADYVRTATAKGLSR RVV VH+LRNSLIPVVTFLGAD Sbjct 181 VLGSVSFAYVLRLTRTSVAENLTADYVRTATAKGLSRRRVVQVHVLRNSLIPVVTFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 L LMGGAIVTEGIFNI+GVGG +YQAVTR E PTVVS VTVL++IYL+ NLLVDLLYAA Sbjct 241 LATLMGGAIVTEGIFNINGVGGTIYQAVTRGEAPTVVSFVTVLIVIYLLANLLVDLLYAA 300 Query 301 LDPRIRY 307 LDPRIRY Sbjct 301 LDPRIRY 307 >gi|340793519|ref|YP_004758982.1| hypothetical protein CVAR_0559 [Corynebacterium variabile DSM 44702] gi|340533429|gb|AEK35909.1| putative membrane protein [Corynebacterium variabile DSM 44702] Length=308 Score = 403 bits (1035), Expect = 2e-110, Method: Compositional matrix adjust. Identities = 207/307 (68%), Positives = 249/307 (82%), Gaps = 0/307 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 M WY+ +R+ ++PVFLGAT LIY MVFL PGDPV ALAGD+ PAV +R YHLD Sbjct 1 MWWYLGKRLLQLIPVFLGATFLIYAMVFLTPGDPVLALAGDKAADPAVLESIREQYHLDK 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PF+VQYL YLGGI GDLG +SG V+ VLA AFP+TIRLAL+AL +E V G+GFGV+A Sbjct 61 PFIVQYLMYLGGIFQGDLGLTFSGREVTTVLAEAFPITIRLALMALVIETVFGVGFGVVA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GL++GG FDS +LV L+IIAIPIFVLGF+ QFLFG+Q I P TVG S RLLLP Sbjct 121 GLKKGGWFDSTLLVVSLIIIAIPIFVLGFVGQFLFGIQWGIVPPTVGSHGSFTRLLLPAF 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLG +SFAYV+RLTRS VA N ADYVRTA+A+GLSRP+V+ H+LRNSLIPVVTF+GAD Sbjct 181 VLGLVSFAYVLRLTRSEVAQNLRADYVRTASARGLSRPKVIAAHVLRNSLIPVVTFIGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 AL+GGAIVTEGIFNIHGVGG+L++AV E+PTVVS+VTVLV+I++++NL++DLLYA Sbjct 241 FAALLGGAIVTEGIFNIHGVGGLLFEAVKLGESPTVVSVVTVLVIIFVLSNLIIDLLYAL 300 Query 301 LDPRIRY 307 LDPRIRY Sbjct 301 LDPRIRY 307 >gi|269795899|ref|YP_003315354.1| peptide ABC transporter permease [Sanguibacter keddieii DSM 10542] gi|269098084|gb|ACZ22520.1| ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Sanguibacter keddieii DSM 10542] Length=308 Score = 401 bits (1030), Expect = 8e-110, Method: Compositional matrix adjust. Identities = 206/304 (68%), Positives = 247/304 (82%), Gaps = 0/304 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 YV RR+ M+PVF+GATLLIY MVF LPGDP+ AL GDR L+PAVA Q+R+ ++LD P L Sbjct 4 YVGRRLLQMIPVFIGATLLIYLMVFALPGDPIQALGGDRGLSPAVADQIRAQFNLDKPLL 63 Query 64 VQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLR 123 VQYL +L GI DLG ++SG P+ V+A AFPVT++LAL+ALA EA+LG+G G IAGLR Sbjct 64 VQYLLFLKGIFTFDLGNSFSGQPIFDVVARAFPVTVKLALMALAFEAILGVGIGFIAGLR 123 Query 124 QGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVLG 183 +GGIFD++VL+ LV+IA+P FV+GF+ QF GV+ P TVG AS LL+P IVLG Sbjct 124 KGGIFDASVLLVSLVVIAVPTFVIGFVLQFFIGVKAGWLPPTVGGDASFKALLMPAIVLG 183 Query 184 AMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGA 243 A+SFAYV+RLTR++VA N ADYVRTATAKGLSR RVV VH+LRNSLIPV+TFLGADLGA Sbjct 184 AVSFAYVLRLTRTSVAENLSADYVRTATAKGLSRGRVVNVHVLRNSLIPVITFLGADLGA 243 Query 244 LMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDP 303 LMGGAIVTEGIFNI GVGG LYQA+ R E TVV+ VT+LV++Y+I NL VDLLYA LDP Sbjct 244 LMGGAIVTEGIFNIAGVGGTLYQAIIRGEPTTVVTFVTILVVVYIIANLFVDLLYAVLDP 303 Query 304 RIRY 307 RIRY Sbjct 304 RIRY 307 >gi|116671367|ref|YP_832300.1| binding-protein-dependent transport systems inner membrane component [Arthrobacter sp. FB24] gi|116611476|gb|ABK04200.1| binding-protein-dependent transport systems inner membrane component [Arthrobacter sp. FB24] Length=309 Score = 397 bits (1021), Expect = 8e-109, Method: Compositional matrix adjust. Identities = 209/307 (69%), Positives = 244/307 (80%), Gaps = 0/307 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 M Y+ +R ++PVFLGATLL+Y +VF LPGDP+ AL GD+P+ AVAAQLR+ YHLD Sbjct 1 MATYILKRFLQLIPVFLGATLLVYFLVFSLPGDPIVALFGDKPVNEAVAAQLRAQYHLDQ 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PF +QYL YL GI DLG+ +SG P++ VL FPVT RLA++AL EAV GI FG+IA Sbjct 61 PFWIQYLLYLKGIFTFDLGQDFSGRPIATVLGEVFPVTARLAVMALIFEAVFGIIFGLIA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLR+G FD+ VL+ LV+I IPIFVLGFL QF GVQL A TV A+V L+LP I Sbjct 121 GLRKGKFFDATVLIASLVVIGIPIFVLGFLLQFTIGVQLGWAKPTVSSAATVQDLILPAI 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLG SFAYV+RLTR++V N +ADYVRTATAKGLSR RVV VHILRNSLIPV+TFLGAD Sbjct 181 VLGLGSFAYVLRLTRTSVIENMNADYVRTATAKGLSRFRVVRVHILRNSLIPVITFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 LGALMGGAIVTEGIFN+ GVG LY+AVT+ E PTVVSIVTVLVLIY+++NLLVDLLYA Sbjct 241 LGALMGGAIVTEGIFNVPGVGNRLYRAVTQGEGPTVVSIVTVLVLIYVVSNLLVDLLYAW 300 Query 301 LDPRIRY 307 LDPRIRY Sbjct 301 LDPRIRY 307 >gi|296141582|ref|YP_003648825.1| binding-protein-dependent transporters inner membrane component [Tsukamurella paurometabola DSM 20162] gi|296029716|gb|ADG80486.1| binding-protein-dependent transport systems inner membrane component [Tsukamurella paurometabola DSM 20162] Length=308 Score = 395 bits (1015), Expect = 4e-108, Method: Compositional matrix adjust. Identities = 206/307 (68%), Positives = 241/307 (79%), Gaps = 0/307 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 M Y+ R+ +V VF G+TLLIY +VFL+P DP+AAL GDR L P V LR+ YHLD Sbjct 1 MTRYLLSRLGQLVIVFFGSTLLIYALVFLVPADPIAALGGDRTLPPEVVEGLRAQYHLDQ 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PFLVQY Y+ G+ D G ++SG PV V+ AFPVT+ LALIAL VEAVLGI FGV+A Sbjct 61 PFLVQYWYYIKGVFTLDFGTSFSGQPVWDVMKRAFPVTVNLALIALVVEAVLGIFFGVLA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GL++G FD+ +L LVIIA+PIFVLGF+AQF+FGV+L+ PVTVG LLLPGI Sbjct 121 GLKKGKWFDTTILFVSLVIIAVPIFVLGFIAQFIFGVKLQWFPVTVGGNLDFYHLLLPGI 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLG +SFAYVVRLTRS V+ N ADYVRTATAKGL R RVV VH+LRNSLIPVVTFLGAD Sbjct 181 VLGLVSFAYVVRLTRSQVSQNLTADYVRTATAKGLPRSRVVLVHVLRNSLIPVVTFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 +GALMGGA+VTEGIFNI GVGG +YQA+ R E TVVS VTVL++IYLI N++VDLLYAA Sbjct 241 IGALMGGALVTEGIFNIPGVGGTIYQAIIRGEATTVVSFVTVLIVIYLICNVVVDLLYAA 300 Query 301 LDPRIRY 307 LDPRIRY Sbjct 301 LDPRIRY 307 >gi|312138004|ref|YP_004005340.1| oligopeptide/dipeptide ABC transporter transmembrane protein [Rhodococcus equi 103S] gi|325675233|ref|ZP_08154918.1| dipeptide ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] gi|311887343|emb|CBH46654.1| putative oligopeptide/dipeptide ABC transporter integral membrane subunit [Rhodococcus equi 103S] gi|325553939|gb|EGD23616.1| dipeptide ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] Length=308 Score = 394 bits (1012), Expect = 1e-107, Method: Compositional matrix adjust. Identities = 215/304 (71%), Positives = 247/304 (82%), Gaps = 0/304 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 Y RRV M+PVF+G T LIY +VFLLPGDPVAALAGDR LTPAV QLR+ YHLD PFL Sbjct 4 YTGRRVLQMIPVFIGTTFLIYALVFLLPGDPVAALAGDRALTPAVTEQLRARYHLDQPFL 63 Query 64 VQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLR 123 VQYL YL G+L D G ++SG PV VLA AFP+T++LA A+ +E VLGIG G+IAGLR Sbjct 64 VQYLLYLKGLLTLDFGTSFSGRPVGEVLAQAFPITLKLAFTAIVIETVLGIGAGLIAGLR 123 Query 124 QGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVLG 183 QGG+FD VLV LV+IAIP+FVLGFLAQF G++ +AP TVG S+ RLLLP VL Sbjct 124 QGGVFDGTVLVLSLVLIAIPVFVLGFLAQFFVGIRWGLAPPTVGADTSLSRLLLPACVLA 183 Query 184 AMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGA 243 A+SFAYV+RLTR++VA AD+VRTATAKGLSRPRVV VH+LRNSLIPVVTFLGADL A Sbjct 184 AVSFAYVLRLTRTSVATTLSADFVRTATAKGLSRPRVVWVHVLRNSLIPVVTFLGADLAA 243 Query 244 LMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDP 303 LMGGA+VTEGIFNI+GVGG +YQAV R E PTVVS V+VLV++YLI NL VDLLYA LDP Sbjct 244 LMGGAVVTEGIFNINGVGGTIYQAVIRGEAPTVVSFVSVLVVVYLIANLFVDLLYAVLDP 303 Query 304 RIRY 307 RIRY Sbjct 304 RIRY 307 >gi|119962653|ref|YP_948514.1| ABC-type dipeptide/oligopeptide transport systems, permease components [Arthrobacter aurescens TC1] gi|119949512|gb|ABM08423.1| putative ABC-type dipeptide/oligopeptide transport systems, permease components [Arthrobacter aurescens TC1] Length=309 Score = 394 bits (1011), Expect = 1e-107, Method: Compositional matrix adjust. Identities = 205/307 (67%), Positives = 242/307 (79%), Gaps = 0/307 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 M Y+ +R ++PVFLGATLL+Y +VF LPGDP+AAL GD+P+ AVAA+LR+ Y+LD Sbjct 1 MATYILKRFLQLIPVFLGATLLVYFLVFSLPGDPIAALFGDKPVNEAVAAKLRAQYNLDQ 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PF++QYL YL I DLG+ +SG P++AVL FPVT RLA++AL EAV GI FG+IA Sbjct 61 PFIIQYLLYLKSIFTFDLGQDFSGRPIAAVLGEVFPVTARLAVMALIFEAVFGIAFGLIA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLR+G +FD VL+ L++I IPIFVLGF+ QF GVQL A TV A+V L+LP I Sbjct 121 GLRKGKLFDGTVLIASLIVIGIPIFVLGFILQFFIGVQLGWAKPTVSAAATVQDLILPAI 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLG SFAYV+RLTR++V N +ADYVRTATAKGLSR RVV VHILRNSLIPVVTFLGAD Sbjct 181 VLGLASFAYVLRLTRTSVIENMNADYVRTATAKGLSRFRVVNVHILRNSLIPVVTFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 LG LMGGAIVTEGIFN+ GVG LY+AV E PTVVSIVTVLVLIY ++NLLVDLLYA Sbjct 241 LGTLMGGAIVTEGIFNVPGVGNRLYRAVLSGEGPTVVSIVTVLVLIYCLSNLLVDLLYAW 300 Query 301 LDPRIRY 307 LDPRIRY Sbjct 301 LDPRIRY 307 >gi|227548450|ref|ZP_03978499.1| dipeptide ABC superfamily ATP binding cassette transporter, membrane protein DppB [Corynebacterium lipophiloflavum DSM 44291] gi|227079494|gb|EEI17457.1| dipeptide ABC superfamily ATP binding cassette transporter, membrane protein DppB [Corynebacterium lipophiloflavum DSM 44291] Length=308 Score = 393 bits (1010), Expect = 2e-107, Method: Compositional matrix adjust. Identities = 196/304 (65%), Positives = 243/304 (80%), Gaps = 0/304 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 Y+ RR+ M+PVF GATLL+Y +VFL+PGDPV AL GDR LT A A++ + Y+LD PF+ Sbjct 4 YIGRRLLQMIPVFFGATLLLYALVFLMPGDPVQALGGDRGLTEAARARIEAEYNLDQPFI 63 Query 64 VQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLR 123 VQYL Y+ GI GD G +SG PVS+V+A+AFPVTI+LAL+AL EAV GI FGVIAG+R Sbjct 64 VQYLLYIKGIFTGDFGTTFSGQPVSSVMANAFPVTIKLALMALVFEAVFGILFGVIAGVR 123 Query 124 QGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVLG 183 +GGIFDS +L+ L +IA+P FV+GF+ Q++ GVQ ++ PVTVG S LL+P +VLG Sbjct 124 RGGIFDSTILLVSLFVIAVPSFVIGFVLQYVVGVQWQLLPVTVGRNESFTALLMPAVVLG 183 Query 184 AMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGA 243 A+SFAYV+RLTR +V+ N ADYVRTA AKGLS +V+ H+LRNSLIPVVTFLGADLGA Sbjct 184 ALSFAYVIRLTRQSVSENLRADYVRTARAKGLSNGQVMNRHVLRNSLIPVVTFLGADLGA 243 Query 244 LMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDP 303 LMGGAIVTEGIF I+GVGG +YQA+ + E TVVS TVLV++Y+I NL+VDLLYA LDP Sbjct 244 LMGGAIVTEGIFGINGVGGTIYQAIIKGEPATVVSFTTVLVIVYIIANLIVDLLYAVLDP 303 Query 304 RIRY 307 RIRY Sbjct 304 RIRY 307 >gi|259507500|ref|ZP_05750400.1| peptide ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium efficiens YS-314] gi|259164885|gb|EEW49439.1| peptide ABC superfamily ATP binding cassette transporter, permease protein [Corynebacterium efficiens YS-314] Length=308 Score = 390 bits (1003), Expect = 1e-106, Method: Compositional matrix adjust. Identities = 202/304 (67%), Positives = 239/304 (79%), Gaps = 0/304 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 YV RR+ M+PVF GATLLIY +VFL+PGDPV AL GDR LT A A ++R Y+LD PFL Sbjct 4 YVGRRLLQMIPVFFGATLLIYALVFLMPGDPVQALGGDRGLTEAAAQRIREEYNLDRPFL 63 Query 64 VQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLR 123 +QYL Y+ GI D G +SG PV V+A+AFPVTI+LAL+ALA EA+ GI FGV AG+R Sbjct 64 IQYLLYIQGIFVLDFGTTFSGQPVLDVMANAFPVTIKLALMALAFEAIFGIAFGVYAGMR 123 Query 124 QGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVLG 183 +GGIFDS VLV LV+IA+P FV+GF+ QFL GV+ + PVTVG S LL+P VLG Sbjct 124 RGGIFDSTVLVLSLVVIAVPTFVIGFVLQFLVGVEWGLLPVTVGSNESFTALLMPAFVLG 183 Query 184 AMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGA 243 A+SFAYV+RLTR +V+ N ADYVRTA AKGLS V+ H+LRNSLIPV TFLGADLGA Sbjct 184 AVSFAYVLRLTRQSVSENLRADYVRTARAKGLSNFTVMNRHVLRNSLIPVATFLGADLGA 243 Query 244 LMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDP 303 LMGGAIVTEGIF I+GVGG LYQA+ R E TVVSIVTVLV++Y+I NL+VDL+YA LDP Sbjct 244 LMGGAIVTEGIFGINGVGGTLYQAILRGEPTTVVSIVTVLVIVYIIANLVVDLIYAVLDP 303 Query 304 RIRY 307 RIRY Sbjct 304 RIRY 307 >gi|337290429|ref|YP_004629450.1| hypothetical protein CULC22_00818 [Corynebacterium ulcerans BR-AD22] gi|334696542|gb|AEG81339.1| putative membrane protein [Corynebacterium ulcerans 809] gi|334698735|gb|AEG83531.1| putative membrane protein [Corynebacterium ulcerans BR-AD22] Length=308 Score = 390 bits (1002), Expect = 1e-106, Method: Compositional matrix adjust. Identities = 198/304 (66%), Positives = 238/304 (79%), Gaps = 0/304 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 YV RR+ M+PVF GATLL+Y +VFL+PGDPVAAL GDR LT A A++ + Y+LD PF+ Sbjct 4 YVGRRLLQMIPVFFGATLLLYALVFLMPGDPVAALGGDRGLTEATRARIEAEYNLDKPFI 63 Query 64 VQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLR 123 +QYL Y+ GI D G +SG PV+ +AHAFPVTI+LA++AL EAV GI FGVIAG+R Sbjct 64 IQYLLYIKGIFSLDFGTTFSGRPVAEAMAHAFPVTIKLAVMALIFEAVFGICFGVIAGMR 123 Query 124 QGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVLG 183 +GGIFDS VLV L++IA+P FV+GF+ QF GV+ I PVTVG SV LL+P IVLG Sbjct 124 RGGIFDSTVLVMSLIVIAVPSFVIGFVFQFFVGVKWGILPVTVGSNTSVTSLLMPAIVLG 183 Query 184 AMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGA 243 A+SFAYVVRLTR +V+ N ADYVRTA AKGLS V H+LRNSLIPV TFLGADLGA Sbjct 184 ALSFAYVVRLTRQSVSENLRADYVRTARAKGLSGRNVTMRHVLRNSLIPVATFLGADLGA 243 Query 244 LMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDP 303 LMGGAIVTEGIF I+GVGG +YQA+ + E TVVS TVLV++Y+I NL+VDL+YA LDP Sbjct 244 LMGGAIVTEGIFGINGVGGTMYQAILKGEPTTVVSFTTVLVIVYIIANLVVDLIYALLDP 303 Query 304 RIRY 307 RIRY Sbjct 304 RIRY 307 >gi|213965388|ref|ZP_03393584.1| oligopeptide transport system permease protein OppB [Corynebacterium amycolatum SK46] gi|213952004|gb|EEB63390.1| oligopeptide transport system permease protein OppB [Corynebacterium amycolatum SK46] Length=308 Score = 389 bits (999), Expect = 3e-106, Method: Compositional matrix adjust. Identities = 197/307 (65%), Positives = 237/307 (78%), Gaps = 0/307 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 MGWY+ +R+ MVPVF GATLLIY MVF +PGDP+AALAGD+ L P A LR+HYHLD Sbjct 1 MGWYIGKRLLQMVPVFFGATLLIYAMVFAMPGDPIAALAGDKQLPPEQVAALRAHYHLDQ 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PF VQY YL G+ D+G +SG V +A AFP+TIRLAL+A+A+EA+ GIG GVIA Sbjct 61 PFFVQYWEYLKGLFTLDMGETFSGRSVGEEIALAFPITIRLALMAVAIEAIFGIGLGVIA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 G+R+GG FDS VLV L++IA P FVLGF+A++LFGV+ +I TVG AS LLLP Sbjct 121 GMRKGGFFDSTVLVLSLLVIATPTFVLGFVARYLFGVRWQIVSPTVGSDASFTSLLLPAF 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLG +S AYV+RLTRS V++ HAD+VRTA AKGL V HILRNSLIPVVTF+GAD Sbjct 181 VLGLVSVAYVLRLTRSEVSSARHADFVRTARAKGLPTSEVTRRHILRNSLIPVVTFIGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 L ALMGGAIVTEGIFN+ G+GG+++ AV E PTVVSIVT+LV+IY+ NLL+DLLYA Sbjct 241 LAALMGGAIVTEGIFNVPGIGGLIFHAVQIGEAPTVVSIVTILVVIYMFANLLIDLLYAV 300 Query 301 LDPRIRY 307 LDPRIRY Sbjct 301 LDPRIRY 307 >gi|19553195|ref|NP_601197.1| ABC-type transporter, permease component [Corynebacterium glutamicum ATCC 13032] gi|62390831|ref|YP_226233.1| ABC-type peptide transport system, permease component [Corynebacterium glutamicum ATCC 13032] gi|21324761|dbj|BAB99384.1| ABC-type transporter, permease components [Corynebacterium glutamicum ATCC 13032] gi|41326169|emb|CAF20332.1| ABC-type peptide transport system, permease component [Corynebacterium glutamicum ATCC 13032] gi|344044126|gb|EGV39807.1| ABC-type peptide transport system, permease component [Corynebacterium glutamicum S9114] Length=308 Score = 389 bits (998), Expect = 5e-106, Method: Compositional matrix adjust. Identities = 198/304 (66%), Positives = 241/304 (80%), Gaps = 0/304 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 YV RR+ M+PVF GATLLIY +VFL+PGDPV AL GDR LT A A ++R Y+LD PF+ Sbjct 4 YVGRRLLQMIPVFFGATLLIYALVFLMPGDPVQALGGDRGLTEAAAEKIRQEYNLDKPFI 63 Query 64 VQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLR 123 VQYL Y+ GI D G +SG PV V+A AFPVTI+LA++AL E++LGI FGVIAG+R Sbjct 64 VQYLLYIKGIFVLDFGTTFSGQPVIDVMARAFPVTIKLAIMALLFESILGIIFGVIAGIR 123 Query 124 QGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVLG 183 +GGIFDS VLV L++IA+P FV+GF+ QFL GV+ + PVTVG S+ L++P +VLG Sbjct 124 RGGIFDSTVLVLSLIVIAVPTFVIGFVLQFLVGVKWGLLPVTVGSNTSITALIMPAVVLG 183 Query 184 AMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGA 243 A+SFAYV+RLTR +V+ N ADYVRTA AKG+S V+ H+LRNSLIPV TFLGADLGA Sbjct 184 AVSFAYVLRLTRQSVSENLRADYVRTARAKGMSGFNVMNRHVLRNSLIPVATFLGADLGA 243 Query 244 LMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDP 303 LMGGAIVTEGIF I+GVGG LYQA+ + E TVVSIVTVLV++Y+I NLLVDL+YA LDP Sbjct 244 LMGGAIVTEGIFGINGVGGTLYQAILKGEPTTVVSIVTVLVIVYIIANLLVDLIYAVLDP 303 Query 304 RIRY 307 RIRY Sbjct 304 RIRY 307 >gi|25028441|ref|NP_738495.1| putative peptide ABC transporter permease protein [Corynebacterium efficiens YS-314] gi|23493726|dbj|BAC18695.1| putative peptide ABC transporter permease protein [Corynebacterium efficiens YS-314] Length=337 Score = 388 bits (997), Expect = 6e-106, Method: Compositional matrix adjust. Identities = 202/304 (67%), Positives = 239/304 (79%), Gaps = 0/304 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 YV RR+ M+PVF GATLLIY +VFL+PGDPV AL GDR LT A A ++R Y+LD PFL Sbjct 33 YVGRRLLQMIPVFFGATLLIYALVFLMPGDPVQALGGDRGLTEAAAQRIREEYNLDRPFL 92 Query 64 VQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLR 123 +QYL Y+ GI D G +SG PV V+A+AFPVTI+LAL+ALA EA+ GI FGV AG+R Sbjct 93 IQYLLYIQGIFVLDFGTTFSGQPVLDVMANAFPVTIKLALMALAFEAIFGIAFGVYAGMR 152 Query 124 QGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVLG 183 +GGIFDS VLV LV+IA+P FV+GF+ QFL GV+ + PVTVG S LL+P VLG Sbjct 153 RGGIFDSTVLVLSLVVIAVPTFVIGFVLQFLVGVEWGLLPVTVGSNESFTALLMPAFVLG 212 Query 184 AMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGA 243 A+SFAYV+RLTR +V+ N ADYVRTA AKGLS V+ H+LRNSLIPV TFLGADLGA Sbjct 213 AVSFAYVLRLTRQSVSENLRADYVRTARAKGLSNFTVMNRHVLRNSLIPVATFLGADLGA 272 Query 244 LMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDP 303 LMGGAIVTEGIF I+GVGG LYQA+ R E TVVSIVTVLV++Y+I NL+VDL+YA LDP Sbjct 273 LMGGAIVTEGIFGINGVGGTLYQAILRGEPTTVVSIVTVLVIVYIIANLVVDLIYAVLDP 332 Query 304 RIRY 307 RIRY Sbjct 333 RIRY 336 >gi|145295895|ref|YP_001138716.1| hypothetical protein cgR_1820 [Corynebacterium glutamicum R] gi|140845815|dbj|BAF54814.1| hypothetical protein [Corynebacterium glutamicum R] Length=308 Score = 388 bits (996), Expect = 7e-106, Method: Compositional matrix adjust. Identities = 198/304 (66%), Positives = 241/304 (80%), Gaps = 0/304 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 YV RR+ M+PVF GATLLIY +VFL+PGDPV AL GDR LT A A ++R Y+LD PF+ Sbjct 4 YVGRRLLQMIPVFFGATLLIYALVFLMPGDPVQALGGDRGLTEAAAEKIRQEYNLDKPFI 63 Query 64 VQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLR 123 VQYL Y+ GI D G +SG PV V+A AFPVTI+LA++AL E++LGI FGVIAG+R Sbjct 64 VQYLLYIKGIFVLDFGTTFSGQPVIDVMARAFPVTIKLAIMALLFESILGIIFGVIAGIR 123 Query 124 QGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVLG 183 +GGIFDS VLV L++IA+P FV+GF+ QFL GV+ + PVTVG S+ L++P +VLG Sbjct 124 RGGIFDSTVLVLSLIVIALPTFVIGFVLQFLVGVKWGLLPVTVGSNTSITALIMPAVVLG 183 Query 184 AMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGA 243 A+SFAYV+RLTR +V+ N ADYVRTA AKG+S V+ H+LRNSLIPV TFLGADLGA Sbjct 184 AVSFAYVLRLTRQSVSENLRADYVRTARAKGMSGFNVMNRHVLRNSLIPVATFLGADLGA 243 Query 244 LMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDP 303 LMGGAIVTEGIF I+GVGG LYQA+ + E TVVSIVTVLV++Y+I NLLVDL+YA LDP Sbjct 244 LMGGAIVTEGIFGINGVGGTLYQAILKGEPTTVVSIVTVLVIVYIIANLLVDLIYAVLDP 303 Query 304 RIRY 307 RIRY Sbjct 304 RIRY 307 >gi|227487767|ref|ZP_03918083.1| dipeptide/oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227542410|ref|ZP_03972459.1| dipeptide/oligopeptide/nickel (Ni2+) ABC superfamily ATP binding cassette transporter, membrane protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227092269|gb|EEI27581.1| dipeptide/oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227181608|gb|EEI62580.1| dipeptide/oligopeptide/nickel (Ni2+) ABC superfamily ATP binding cassette transporter, membrane protein [Corynebacterium glucuronolyticum ATCC 51866] Length=308 Score = 387 bits (994), Expect = 1e-105, Method: Compositional matrix adjust. Identities = 195/304 (65%), Positives = 245/304 (81%), Gaps = 0/304 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 Y+ RR+ M+PVF+GATLL+Y +VFL+PGDPVAAL GDR ++ A A++ + Y+LD PF+ Sbjct 4 YIGRRLLQMIPVFIGATLLLYSLVFLMPGDPVAALGGDRGISEAARARIEAEYNLDKPFI 63 Query 64 VQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLR 123 VQYL YL GIL D G +SG PV+ V+A+AFPVTI+LA++ALA EA+LGI GVIAG+R Sbjct 64 VQYLLYLKGILTLDFGTTFSGQPVAHVMANAFPVTIKLAVMALAFEAILGISVGVIAGVR 123 Query 124 QGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVLG 183 +GGIFDS VL+ L +IA+P FV+GF+ QFL GV+ + PVTVG S LL+P +VLG Sbjct 124 RGGIFDSTVLLVSLFVIAVPSFVIGFVLQFLVGVKWGLLPVTVGRNESFEALLMPAVVLG 183 Query 184 AMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGA 243 A+SFAYV+RLTR +V+ N ADYVRTATAKG+S+ V+ H+LRNSLIPVVTFLGADLGA Sbjct 184 ALSFAYVLRLTRQSVSENLSADYVRTATAKGMSKSSVMGRHVLRNSLIPVVTFLGADLGA 243 Query 244 LMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDP 303 LMGGAIVTEGIF I+GVGG +YQA+ + E TVVS TVLV++Y+I NL+VDL+YA LDP Sbjct 244 LMGGAIVTEGIFGINGVGGSIYQAILKGEPATVVSFTTVLVIVYIIANLIVDLIYALLDP 303 Query 304 RIRY 307 RIRY Sbjct 304 RIRY 307 >gi|300858178|ref|YP_003783161.1| hypothetical protein cpfrc_00760 [Corynebacterium pseudotuberculosis FRC41] gi|300685632|gb|ADK28554.1| putative membrane protein [Corynebacterium pseudotuberculosis FRC41] gi|302205900|gb|ADL10242.1| Oligopeptide transport system permease protein oppB [Corynebacterium pseudotuberculosis C231] gi|308276135|gb|ADO26034.1| Putative ABC-type oligopeptide transport system [Corynebacterium pseudotuberculosis I19] gi|341824570|gb|AEK92091.1| Oligopeptide transport system permease protein oppB [Corynebacterium pseudotuberculosis PAT10] Length=308 Score = 386 bits (992), Expect = 2e-105, Method: Compositional matrix adjust. Identities = 195/304 (65%), Positives = 237/304 (78%), Gaps = 0/304 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 Y+ RR+ M+PVF GATLL+Y +VFL+PGDPVAAL GDR LT A A++ + Y+LD PF+ Sbjct 4 YIGRRLLQMIPVFFGATLLLYALVFLMPGDPVAALGGDRGLTEAARARIEADYNLDKPFI 63 Query 64 VQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLR 123 +QYL Y+ GI D G +SG PV+ +A AFPVTI+LA++AL EAV GI FGVIAG+R Sbjct 64 IQYLLYIKGIFSLDFGTTFSGRPVAEAMAQAFPVTIKLAVMALIFEAVFGICFGVIAGMR 123 Query 124 QGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVLG 183 +GGIFDS VLV L++IA+P FV+GF+ QF GV+ I PVTVG SV LL+P IVLG Sbjct 124 RGGIFDSTVLVMSLIVIAVPSFVIGFVFQFFVGVKWGILPVTVGSNTSVKSLLMPAIVLG 183 Query 184 AMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGA 243 A+SFAYVVRLTR +V+ N ADYVRTA AKGL+ V H+LRNSLIPV TFLGADLGA Sbjct 184 ALSFAYVVRLTRQSVSENLRADYVRTARAKGLNGRNVTMRHVLRNSLIPVATFLGADLGA 243 Query 244 LMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDP 303 LMGGAIVTEGIF I+GVGG +YQA+ + E TVVS TVLV++Y+I NL+VDL+YA LDP Sbjct 244 LMGGAIVTEGIFGINGVGGTMYQAILKGEPTTVVSFTTVLVIVYIIANLVVDLIYALLDP 303 Query 304 RIRY 307 RIRY Sbjct 304 RIRY 307 >gi|325067459|ref|ZP_08126132.1| dipeptide/oligopeptide/nickel ABC transporter permease [Actinomyces oris K20] Length=309 Score = 383 bits (984), Expect = 2e-104, Method: Compositional matrix adjust. Identities = 201/305 (66%), Positives = 241/305 (80%), Gaps = 1/305 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 YVARR+ MVPVF GATLLIY MVF LPGDP+AAL G R L+P V Q+++ YHLD PF+ Sbjct 4 YVARRLLQMVPVFFGATLLIYAMVFALPGDPIAALGGQRSLSPEVIDQIKASYHLDKPFI 63 Query 64 VQYLRYLGGILHGDLGRAYSGLP-VSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGL 122 VQYL YL G+ DLG++ G V VL A+P+TI+L+L+ALA EAV GIGFG+IAG+ Sbjct 64 VQYLLYLKGLFTLDLGQSLRGTESVLDVLVRAYPITIKLSLMALAFEAVAGIGFGLIAGV 123 Query 123 RQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVL 182 R+GG FD+ VLV LV+IA+P FV+GF+ QF+ GV+L PVT GE LL+P +VL Sbjct 124 RKGGWFDATVLVLSLVVIAVPTFVIGFVLQFIVGVRLGWLPVTAGESPGFTELLMPAVVL 183 Query 183 GAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLG 242 GA+SFAYV+RLTR+ VA N AD+VRTA AKGLS RV+ VH+LRNSL+PVVTFLGADLG Sbjct 184 GAVSFAYVLRLTRTEVAENLTADHVRTARAKGLSGARVMIVHVLRNSLVPVVTFLGADLG 243 Query 243 ALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALD 302 ALMGGAIVTEGIFNI GVGG LY A+ R + P VVS TVLVL+++I+NLLVDLLYAALD Sbjct 244 ALMGGAIVTEGIFNIKGVGGTLYSAIIRGDGPMVVSFTTVLVLVFIISNLLVDLLYAALD 303 Query 303 PRIRY 307 PRIRY Sbjct 304 PRIRY 308 >gi|227505660|ref|ZP_03935709.1| dipeptide/oligopeptide/nickel (Ni2+) ABC superfamily ATP binding cassette transporter, membrane protein DppB [Corynebacterium striatum ATCC 6940] gi|227197734|gb|EEI77782.1| dipeptide/oligopeptide/nickel (Ni2+) ABC superfamily ATP binding cassette transporter, membrane protein DppB [Corynebacterium striatum ATCC 6940] Length=308 Score = 383 bits (984), Expect = 2e-104, Method: Compositional matrix adjust. Identities = 191/304 (63%), Positives = 238/304 (79%), Gaps = 0/304 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 Y+ RRV M+PVF GATLLIY +VFL+PGDPV AL GDR LT A A++ + Y+LD PF+ Sbjct 4 YIGRRVLQMIPVFFGATLLIYALVFLMPGDPVEALGGDRGLTEAARARIEAEYNLDKPFI 63 Query 64 VQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLR 123 VQYL Y+ GI D G +SG+PV+ V+A+AFPVT++L L+A+ E V GI FGVIAG+R Sbjct 64 VQYLLYIKGIFMLDFGTTFSGIPVTEVMANAFPVTVKLTLMAIVFETVFGILFGVIAGMR 123 Query 124 QGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVLG 183 +GGIFDS VLV L++IA+P FV+GF+ Q+L G++ ++ PVTVG +AS LL+P +VLG Sbjct 124 RGGIFDSTVLVASLLVIAVPSFVIGFVFQYLVGIKWQLLPVTVGAKASFESLLMPAMVLG 183 Query 184 AMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGA 243 A+S AYV+RLTR +VA N ADYVRTA AKGLS V H+LRNSLIPV TF+GAD+G+ Sbjct 184 ALSLAYVIRLTRQSVAENLRADYVRTARAKGLSSGAVTRRHVLRNSLIPVATFIGADIGS 243 Query 244 LMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDP 303 LM GAIVTEGIF I+GVGG +YQA+ R E T+VS TVLV+IY+I NLLVDLLYA LDP Sbjct 244 LMTGAIVTEGIFGINGVGGTMYQAILRGEPTTIVSFTTVLVIIYIIANLLVDLLYAVLDP 303 Query 304 RIRY 307 RIRY Sbjct 304 RIRY 307 >gi|326772216|ref|ZP_08231501.1| dipeptide ABC transporter, permease protein [Actinomyces viscosus C505] gi|326638349|gb|EGE39250.1| dipeptide ABC transporter, permease protein [Actinomyces viscosus C505] Length=309 Score = 382 bits (981), Expect = 3e-104, Method: Compositional matrix adjust. Identities = 199/305 (66%), Positives = 241/305 (80%), Gaps = 1/305 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 YVARR+ MVPVF GATLLIY MVF LPGDP+AAL G R L+P V Q+++ YHLD PF+ Sbjct 4 YVARRLLQMVPVFFGATLLIYAMVFALPGDPIAALGGQRSLSPEVIDQIKASYHLDKPFI 63 Query 64 VQYLRYLGGILHGDLGRAYSGLP-VSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGL 122 VQYL YL G+ DLG++ G V VL A+P+TI+L+L+ALA EA+ GIGFG+IAG+ Sbjct 64 VQYLLYLKGLFTLDLGQSLRGTESVLDVLVRAYPITIKLSLMALAFEAIAGIGFGLIAGV 123 Query 123 RQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVL 182 R+GG FD+ VLV LV+IA+P FV+GF+ QF+ GV+L PVT GE LL+P +VL Sbjct 124 RKGGWFDATVLVLSLVVIAVPTFVIGFVLQFIVGVRLGWLPVTAGESPGFTELLMPAVVL 183 Query 183 GAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLG 242 GA+SFAYV+RLTR+ VA N AD+VRTA AKGLS RV+ VH+LRNSL+PVVTFLGADLG Sbjct 184 GAVSFAYVLRLTRTEVAENLTADHVRTARAKGLSGARVMIVHVLRNSLVPVVTFLGADLG 243 Query 243 ALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALD 302 ALMGGAIVTEGIFNI GVGG LY A+ R + P VVS TVLVL+++++NLLVDLLYAALD Sbjct 244 ALMGGAIVTEGIFNIKGVGGTLYSAIIRGDGPMVVSFTTVLVLVFIVSNLLVDLLYAALD 303 Query 303 PRIRY 307 PRIRY Sbjct 304 PRIRY 308 >gi|343523684|ref|ZP_08760645.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 175 str. F0384] gi|343399901|gb|EGV12422.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 175 str. F0384] Length=309 Score = 382 bits (981), Expect = 4e-104, Method: Compositional matrix adjust. Identities = 199/305 (66%), Positives = 241/305 (80%), Gaps = 1/305 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 YVARR+ MVPVF GATLLIY MVF LPGDP+AAL G R L+P V Q+++ YHLD PF+ Sbjct 4 YVARRLLQMVPVFFGATLLIYAMVFALPGDPIAALGGQRSLSPEVIDQIKASYHLDKPFI 63 Query 64 VQYLRYLGGILHGDLGRAYSGLP-VSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGL 122 VQYL YL G+ DLG++ G V VL A+P+TI+L+L+ALA EA+ GIGFG+IAG+ Sbjct 64 VQYLLYLKGLFTLDLGQSLRGTESVLDVLVRAYPITIKLSLMALAFEAIAGIGFGLIAGV 123 Query 123 RQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVL 182 R+GG FD+ VLV LV+IA+P FV+GF+ QF+ GV+L PVT GE LL+P +VL Sbjct 124 RKGGWFDATVLVLSLVVIAVPTFVIGFVLQFIVGVRLGWLPVTAGESPGFTELLMPAVVL 183 Query 183 GAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLG 242 GA+SFAYV+RLTR+ VA N AD+VRTA AKGLS RV+ VH+LRNSL+PVVTFLGADLG Sbjct 184 GAVSFAYVLRLTRTEVAENLTADHVRTARAKGLSGVRVMIVHVLRNSLVPVVTFLGADLG 243 Query 243 ALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALD 302 ALMGGAIVTEGIFNI GVGG LY A+ R + P VVS TVLVL+++++NLLVDLLYAALD Sbjct 244 ALMGGAIVTEGIFNIKGVGGTLYSAIIRGDGPMVVSFTTVLVLVFIVSNLLVDLLYAALD 303 Query 303 PRIRY 307 PRIRY Sbjct 304 PRIRY 308 >gi|329944136|ref|ZP_08292395.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328530866|gb|EGF57722.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170 str. F0386] Length=309 Score = 380 bits (976), Expect = 1e-103, Method: Compositional matrix adjust. Identities = 198/305 (65%), Positives = 241/305 (80%), Gaps = 1/305 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 YV+RR+ MVPVF GATLLIY MVF LPGDP+AAL G R L+P V Q+++ YHLD PF+ Sbjct 4 YVSRRLLQMVPVFFGATLLIYAMVFALPGDPIAALGGQRSLSPEVIEQIKAGYHLDKPFI 63 Query 64 VQYLRYLGGILHGDLGRAYSGLP-VSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGL 122 VQYL YL G+ DLG++ G V VL A+P+TI+L+L+ALA EAV GIGFG+IAG+ Sbjct 64 VQYLLYLKGLFTLDLGQSLRGTESVLDVLVRAYPITIKLSLMALAFEAVAGIGFGLIAGV 123 Query 123 RQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVL 182 R+GG FD+ VLV LV+IA+P FV+GF+ QF+ GV+L PVT GE LL+P +VL Sbjct 124 RKGGWFDATVLVLSLVVIAVPTFVIGFVLQFIIGVRLGWLPVTAGESPGFTELLMPAVVL 183 Query 183 GAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLG 242 GA+SFAYV+RLTR+ VA N AD+VRTA A+GLS RV+ VH+LRNSL+PVVTFLGADLG Sbjct 184 GAVSFAYVLRLTRTEVAENLTADHVRTARARGLSGARVMIVHVLRNSLVPVVTFLGADLG 243 Query 243 ALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALD 302 ALMGGAIVTEGIFNI GVGG LY A+ R + P VVS TVLVL+++++NLLVDLLYAALD Sbjct 244 ALMGGAIVTEGIFNIKGVGGTLYSAIIRGDGPMVVSFTTVLVLVFIVSNLLVDLLYAALD 303 Query 303 PRIRY 307 PRIRY Sbjct 304 PRIRY 308 >gi|152965094|ref|YP_001360878.1| ABC transporter inner membrane protein [Kineococcus radiotolerans SRS30216] gi|151359611|gb|ABS02614.1| binding-protein-dependent transport systems inner membrane component [Kineococcus radiotolerans SRS30216] Length=308 Score = 380 bits (976), Expect = 1e-103, Method: Compositional matrix adjust. Identities = 204/307 (67%), Positives = 247/307 (81%), Gaps = 0/307 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 MGWY+ RR+ MVPVF GATLLIY +VF LPGDP+ AL GD+P++ + A L + Y+LD Sbjct 1 MGWYIGRRLLQMVPVFFGATLLIYALVFALPGDPILALFGDKPVSDSARATLTAQYNLDK 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PFLVQYL +L GI+ D G ++SG PV + AFP TI+LA++AL +EAVLGI FG IA Sbjct 61 PFLVQYLLFLKGIVTLDFGTSFSGQPVVDQILRAFPTTIKLAVVALVIEAVLGILFGFIA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLR+GGIFDS VL LV+I IP+FVLGF+AQ+ GV+ I TVG V L+LPGI Sbjct 121 GLRRGGIFDSTVLFISLVVIGIPVFVLGFVAQYTVGVKWGIVRPTVGGDPGVLDLVLPGI 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLGA+SFAYV+RLTR++VA AD+VRTATAKGLSRPRV+TVH+LRNSLIPVVTFLG D Sbjct 181 VLGALSFAYVLRLTRNSVAEGLSADHVRTATAKGLSRPRVMTVHVLRNSLIPVVTFLGTD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 LGALMGGA+VTEGIFNI GVG +L+Q+V RQE PTVVS+VT+LV++YL+ NL+VDLLYA Sbjct 241 LGALMGGAVVTEGIFNIPGVGNLLFQSVVRQEGPTVVSVVTILVVVYLVANLVVDLLYAV 300 Query 301 LDPRIRY 307 LDPRIRY Sbjct 301 LDPRIRY 307 >gi|88856132|ref|ZP_01130793.1| ABC transporter, permease protein [marine actinobacterium PHSC20C1] gi|88814700|gb|EAR24561.1| ABC transporter, permease protein [marine actinobacterium PHSC20C1] Length=309 Score = 379 bits (974), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 190/307 (62%), Positives = 241/307 (79%), Gaps = 0/307 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 M WY +R M+PVF GAT LIY MVF +PGDP+AAL GDRP P V LR+ Y+LD Sbjct 1 MLWYAGKRFLQMIPVFFGATFLIYFMVFAVPGDPIAALYGDRPPAPGVIELLRAEYNLDK 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PF+VQYL Y+GG+ GD G +SG PV+ V+A AFP+T RLA++ALA+EA GI G+IA Sbjct 61 PFIVQYLLYIGGLFQGDFGTTFSGRPVADVMAQAFPITARLAMLALAIEAFFGIIVGLIA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLR+G +FD++ LV L++I++P FV+GF+ Q +FG+QL A TV A L++P I Sbjct 121 GLRKGKLFDASALVISLLLISVPTFVVGFVLQLVFGIQLGWARTTVSGDAPWNELIMPAI 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VL ++SFAY+VRLTR++VA N AD+VRTATAKGLSR RVVTVH+LRNSL+PVVT+LG D Sbjct 181 VLASVSFAYIVRLTRASVADNLGADFVRTATAKGLSRRRVVTVHVLRNSLVPVVTYLGVD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 +G+LM GAIVTEGIFNI+GVGG +Y+A+T E PTVVS V V+V+I+++ NLLVDLLYAA Sbjct 241 IGSLMVGAIVTEGIFNINGVGGTVYRAITLGEGPTVVSFVAVMVIIFVLANLLVDLLYAA 300 Query 301 LDPRIRY 307 LDPRIRY Sbjct 301 LDPRIRY 307 >gi|334336454|ref|YP_004541606.1| ABC-type transporter, integral membrane subunit [Isoptericola variabilis 225] gi|334106822|gb|AEG43712.1| ABC-type transporter, integral membrane subunit [Isoptericola variabilis 225] Length=308 Score = 379 bits (973), Expect = 3e-103, Method: Compositional matrix adjust. Identities = 197/307 (65%), Positives = 237/307 (78%), Gaps = 0/307 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 M WY+ RR+ ++PVFLGATLL+Y MVFLLPGDPVAAL G+R L AV Q+R Y+LD Sbjct 1 MLWYLGRRLLQVIPVFLGATLLLYAMVFLLPGDPVAALGGERGLPEAVQEQIRERYNLDK 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PFLVQYL +L G+ D G + G + V+A A PVT +LAL+AL EAV GI FG++A Sbjct 61 PFLVQYLLFLQGVFTLDFGVDFRGREILDVIAGALPVTFQLALMALVFEAVFGIAFGLLA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 G+R+GG FD +VLV L +IA+P FV+GF+ QF+ GVQL PVT G + LL+P I Sbjct 121 GMRKGGWFDGSVLVMSLFVIAVPTFVIGFVLQFVVGVQLGWLPVTAGRDPNFRSLLMPAI 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLGA+SFAYV+RLTR++VA N ADYVRTA AKGL R +V H+LRNSLIPVVTFLGAD Sbjct 181 VLGAVSFAYVLRLTRTSVAENLSADYVRTARAKGLRRSQVTRRHVLRNSLIPVVTFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 LG+LM GAIVTEGIFNI+GVGG LYQA+ R E TVVS+ TVLVLIY++ NL+VDLLYAA Sbjct 241 LGSLMAGAIVTEGIFNINGVGGTLYQAILRGENVTVVSLTTVLVLIYIVANLVVDLLYAA 300 Query 301 LDPRIRY 307 LDPRIRY Sbjct 301 LDPRIRY 307 >gi|38233553|ref|NP_939320.1| putative peptide transport system membrane protein [Corynebacterium diphtheriae NCTC 13129] gi|38199813|emb|CAE49476.1| Putative peptide transport system membrane protein [Corynebacterium diphtheriae] Length=308 Score = 379 bits (973), Expect = 4e-103, Method: Compositional matrix adjust. Identities = 193/304 (64%), Positives = 235/304 (78%), Gaps = 0/304 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 Y+ RR+ M+PVF GATLL+Y +VFL+PGDPVAAL GDR LT A A++ + Y+LD PFL Sbjct 4 YIGRRLLQMIPVFFGATLLLYALVFLMPGDPVAALGGDRGLTEAARARISAEYNLDKPFL 63 Query 64 VQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLR 123 VQYL Y+ GI D G +SG PV+ +AHAFPVTI+LA++AL EAV G+ FGVIAG+R Sbjct 64 VQYLLYIKGIFQLDFGTTFSGRPVAEAMAHAFPVTIKLAVMALIFEAVFGVIFGVIAGMR 123 Query 124 QGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVLG 183 +GGIFDS VLV L++IA+P FV+GF+ QF GV+ + PVTVG SV LL+P IVLG Sbjct 124 RGGIFDSTVLVLSLLVIAVPSFVIGFVFQFFVGVKWGLLPVTVGSNVSVKSLLMPAIVLG 183 Query 184 AMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGA 243 A+SFAYVVRLTR +V+ N ADYVRTA AKGL V H+LRNSLIPV T+LGADLGA Sbjct 184 ALSFAYVVRLTRQSVSENLTADYVRTARAKGLKGSTVTMRHVLRNSLIPVATYLGADLGA 243 Query 244 LMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDP 303 LM GAIVTEGIF I+GVGG +Y A+ + E TVVS TVLV++Y+I NL+VDL+YA LDP Sbjct 244 LMAGAIVTEGIFGINGVGGTMYHAILKGEPTTVVSFTTVLVIVYIIANLVVDLIYALLDP 303 Query 304 RIRY 307 RIRY Sbjct 304 RIRY 307 >gi|315654658|ref|ZP_07907564.1| dipeptide ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii ATCC 51333] gi|315491122|gb|EFU80741.1| dipeptide ABC superfamily ATP binding cassette transporter, membrane protein [Mobiluncus curtisii ATCC 51333] Length=308 Score = 377 bits (969), Expect = 9e-103, Method: Compositional matrix adjust. Identities = 197/307 (65%), Positives = 238/307 (78%), Gaps = 0/307 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 MG Y+ RR+ ++PV LGATLLIY +VFL+PGDP+ AL GDR L+ A AA +R YHLD Sbjct 1 MGRYLGRRLLQIIPVMLGATLLIYALVFLMPGDPIQALGGDRGLSEAAAAAMRRRYHLDQ 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PF+VQYL YL GI D G +SG V+ V+A AFPVTI+LAL+ALA EA+ GI FG IA Sbjct 61 PFIVQYLLYLKGIFTLDFGLTFSGREVTEVMASAFPVTIKLALMALAFEAIFGIVFGTIA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GL++GG+FD+ VLV L +IA+P FV+GF+ QFL GV+L P TVG S RLL+P I Sbjct 121 GLKRGGVFDATVLVVSLFVIAVPTFVIGFVMQFLIGVKLRWLPTTVGGDTSFERLLMPAI 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLGA+SFAYV+RLTR +V+ ADYVRTA AKGL RV+ VHILRNSLIPV TFLGAD Sbjct 181 VLGAVSFAYVLRLTRQSVSETVSADYVRTAYAKGLRPGRVIRVHILRNSLIPVATFLGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 LGALMGGAIVTEGIF I+GVGG +YQA+ + E TVVS TVLV++Y++ NL+VDL+YA Sbjct 241 LGALMGGAIVTEGIFAINGVGGNIYQAIIKGEPATVVSFTTVLVMVYVLANLIVDLMYAL 300 Query 301 LDPRIRY 307 LDPRIRY Sbjct 301 LDPRIRY 307 >gi|227832044|ref|YP_002833751.1| iron ABC transport system, permease protein [Corynebacterium aurimucosum ATCC 700975] gi|262184102|ref|ZP_06043523.1| iron ABC transport system, permease protein [Corynebacterium aurimucosum ATCC 700975] gi|227453060|gb|ACP31813.1| iron ABC transport system, permease protein [Corynebacterium aurimucosum ATCC 700975] Length=308 Score = 376 bits (966), Expect = 2e-102, Method: Compositional matrix adjust. Identities = 188/304 (62%), Positives = 236/304 (78%), Gaps = 0/304 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 Y+ RRV M+PVF GATLLIY +VFL+PGDPV AL GDR LT A A++ + Y+LD PF+ Sbjct 4 YIGRRVLQMIPVFFGATLLIYALVFLMPGDPVEALGGDRGLTEAARARIEAEYNLDKPFI 63 Query 64 VQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLR 123 +QYL Y+ GI D G +SG+PV+ V+A+AFPVT++L ++A+ E+V GI FGV AG+R Sbjct 64 IQYLLYIKGIFMLDFGTTFSGVPVTQVMANAFPVTVKLTVMAIIFESVFGILFGVFAGMR 123 Query 124 QGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVLG 183 +GG FDS VLV L++IA+P FV+GF+ Q+L G++ + PVTVG A+V LL+P +VLG Sbjct 124 RGGFFDSTVLVISLLVIAVPSFVIGFVFQYLVGIKWGVLPVTVGANATVKSLLMPAMVLG 183 Query 184 AMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGA 243 A+S AYV+RLTR +VA N ADYVRTA AKGLS V H+LRNSLIPV TF+GAD+GA Sbjct 184 ALSLAYVIRLTRQSVAENLRADYVRTARAKGLSNGAVTRRHVLRNSLIPVATFIGADIGA 243 Query 244 LMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDP 303 LM GAIVTEGIF I+GVGG +YQA+ R E T+VS TVLV+IY+I NLLVDLLYA LDP Sbjct 244 LMTGAIVTEGIFGINGVGGTMYQAILRGEPTTIVSFTTVLVIIYIIANLLVDLLYAVLDP 303 Query 304 RIRY 307 RIRY Sbjct 304 RIRY 307 >gi|317506676|ref|ZP_07964464.1| inner membrane transporter [Segniliparus rugosus ATCC BAA-974] gi|316255026|gb|EFV14308.1| inner membrane transporter [Segniliparus rugosus ATCC BAA-974] Length=309 Score = 376 bits (965), Expect = 3e-102, Method: Compositional matrix adjust. Identities = 197/302 (66%), Positives = 235/302 (78%), Gaps = 0/302 (0%) Query 5 VARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFLV 64 +A+R+ +VPVF GATLL+Y +VFL+PGDP+AAL G + L V QLR+ YHLD PFLV Sbjct 5 IAQRLLQLVPVFFGATLLLYALVFLMPGDPIAALGGGKQLPQPVIDQLRARYHLDRPFLV 64 Query 65 QYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLRQ 124 QYL YL GI DLG ++SG PV+ V+A FPVTIRL +IA VE V G+ GV++GLR+ Sbjct 65 QYLYYLKGIFTFDLGTSFSGRPVAEVIAEKFPVTIRLTVIAALVELVGGVALGVVSGLRK 124 Query 125 GGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVLGA 184 GG DS +L LV+IA+PIFVLG +AQF+ GVQ + PVTVG AS GRLLLPG VLG Sbjct 125 GGWLDSTILAASLVVIAVPIFVLGLVAQFVLGVQWGLVPVTVGPNASWGRLLLPGTVLGL 184 Query 185 MSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGAL 244 +S AYVVRLTR+AVA ADYVRTATAKGL R+V VH+LRNSLIPVVTF+GAD+GAL Sbjct 185 VSLAYVVRLTRNAVAETVGADYVRTATAKGLRPSRLVVVHVLRNSLIPVVTFVGADIGAL 244 Query 245 MGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDPR 304 MGGA VTEGIFNI GVG L+Q+V R E+ TVVS+VTVL+++YL NL VDLLYA LDPR Sbjct 245 MGGATVTEGIFNIDGVGNTLFQSVVRGESSTVVSLVTVLIVVYLFANLAVDLLYALLDPR 304 Query 305 IR 306 IR Sbjct 305 IR 306 >gi|307700665|ref|ZP_07637693.1| putative dipeptide ABC transporter, permease protein DppB [Mobiluncus mulieris FB024-16] gi|307614195|gb|EFN93436.1| putative dipeptide ABC transporter, permease protein DppB [Mobiluncus mulieris FB024-16] Length=308 Score = 375 bits (964), Expect = 3e-102, Method: Compositional matrix adjust. Identities = 190/304 (63%), Positives = 235/304 (78%), Gaps = 0/304 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 Y+ RR+ ++PV +GAT +IY +VFL+PGDP+AAL GDR L PA L++ Y+LD PF+ Sbjct 4 YLGRRLLQIIPVLIGATFIIYALVFLMPGDPIAALGGDRGLPPAAETALKAKYNLDKPFI 63 Query 64 VQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLR 123 VQYL YL GI+ D G +SG V+ V+A AFPVTI+LA +ALA EA+ GI FG IAGLR Sbjct 64 VQYLLYLKGIMTFDFGLTFSGREVTEVMASAFPVTIKLAFMALAFEAIFGITFGTIAGLR 123 Query 124 QGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVLG 183 +GG+FD+ VLV L +IA+P FV+GF+ QF+ GV+L P TV + + LL+P IVLG Sbjct 124 RGGVFDATVLVVSLFVIAVPTFVIGFVMQFIIGVKLGWLPTTVAGKDNFVSLLMPAIVLG 183 Query 184 AMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGA 243 A+SFAYV+RLTR +V+ A AD+VRTA AKGL RV+ VHILRNSLIPV TFLGADLG Sbjct 184 AVSFAYVLRLTRQSVSETASADFVRTAKAKGLKNGRVIRVHILRNSLIPVATFLGADLGG 243 Query 244 LMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDP 303 LMGGAIVTEGIF I+GVGG +YQA+ + E TVVS TVLVL+Y++ NLLVDLLYAALDP Sbjct 244 LMGGAIVTEGIFAINGVGGNIYQAIIKGEPATVVSFTTVLVLVYIVANLLVDLLYAALDP 303 Query 304 RIRY 307 RIRY Sbjct 304 RIRY 307 >gi|269976781|ref|ZP_06183756.1| dipeptide ABC transporter, permease protein DppB [Mobiluncus mulieris 28-1] gi|269934978|gb|EEZ91537.1| dipeptide ABC transporter, permease protein DppB [Mobiluncus mulieris 28-1] Length=308 Score = 375 bits (964), Expect = 4e-102, Method: Compositional matrix adjust. Identities = 189/304 (63%), Positives = 235/304 (78%), Gaps = 0/304 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 Y+ RR+ ++PV +GAT +IY +VFL+PGDP+AAL GDR L PA L++ Y+LD PF+ Sbjct 4 YLGRRLLQIIPVLIGATFIIYALVFLMPGDPIAALGGDRGLPPAAETALKAKYNLDKPFI 63 Query 64 VQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLR 123 VQYL YL GI+ D G +SG V+ V+A AFPVTI+LA +ALA EA+ GI FG IAGLR Sbjct 64 VQYLLYLKGIMTFDFGLTFSGREVTEVMASAFPVTIKLAFMALAFEAIFGITFGTIAGLR 123 Query 124 QGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVLG 183 +GG+FD+ VL+ L +IA+P FV+GF+ QF+ GV+L P TV + + LL+P IVLG Sbjct 124 RGGVFDATVLIVSLFVIAVPTFVIGFVMQFIIGVKLGWLPTTVAGKDNFVSLLMPAIVLG 183 Query 184 AMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGA 243 A+SFAYV+RLTR +V+ A AD+VRTA AKGL RV+ VHILRNSLIPV TFLGADLG Sbjct 184 AVSFAYVLRLTRQSVSETASADFVRTAKAKGLKNGRVIRVHILRNSLIPVATFLGADLGG 243 Query 244 LMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDP 303 LMGGAIVTEGIF I+GVGG +YQA+ + E TVVS TVLVL+Y++ NLLVDLLYAALDP Sbjct 244 LMGGAIVTEGIFAINGVGGNIYQAIIKGEPATVVSFTTVLVLVYIVANLLVDLLYAALDP 303 Query 304 RIRY 307 RIRY Sbjct 304 RIRY 307 >gi|340360826|ref|ZP_08683291.1| dipeptide ABC superfamily ATP binding cassette transporter, membrane protein DppB [Actinomyces sp. oral taxon 448 str. F0400] gi|339883018|gb|EGQ72898.1| dipeptide ABC superfamily ATP binding cassette transporter, membrane protein DppB [Actinomyces sp. oral taxon 448 str. F0400] Length=311 Score = 374 bits (961), Expect = 9e-102, Method: Compositional matrix adjust. Identities = 195/305 (64%), Positives = 239/305 (79%), Gaps = 1/305 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 Y RR+ M+PVF GATLLIY MVF LPGDPV+AL GDR L+PA+ Q+R+ Y+LD PFL Sbjct 6 YAGRRLLQMIPVFFGATLLIYAMVFALPGDPVSALGGDRALSPALQEQIRAQYNLDKPFL 65 Query 64 VQYLRYLGGILHGDLGRAYSG-LPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGL 122 VQYL +L GI DLG G P+ VLA A+PVTIRL+++ALAVE V GI G++AG+ Sbjct 66 VQYLLFLKGIATFDLGTTIRGSRPIVDVLAEAYPVTIRLSVMALAVETVAGIVIGMVAGM 125 Query 123 RQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVL 182 R+G +FD+ VLV LV+IA+P FV+GFL QF GV+L PVT G + LL+P +VL Sbjct 126 RKGRLFDATVLVLSLVVIAVPTFVIGFLLQFFVGVKLGWLPVTAGNAPGLKELLMPALVL 185 Query 183 GAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLG 242 GA+SFAYV+RLTR+ V N AD+VRTA AKGLS RV+ VH+LRNSL+PVVTFLGADLG Sbjct 186 GAVSFAYVLRLTRTQVGENLSADHVRTARAKGLSGGRVMIVHVLRNSLVPVVTFLGADLG 245 Query 243 ALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALD 302 +LMGGAIVTEGIFNI+GVGG LY+A+ E PTVV+ TVL+L+++I+NLLVDLLYAALD Sbjct 246 SLMGGAIVTEGIFNINGVGGTLYRAILNGEGPTVVAFTTVLILVFIISNLLVDLLYAALD 305 Query 303 PRIRY 307 PRIRY Sbjct 306 PRIRY 310 >gi|306818092|ref|ZP_07451823.1| dipeptide ABC superfamily ATP binding cassette transporter, membrane protein DppB [Mobiluncus mulieris ATCC 35239] gi|304649056|gb|EFM46350.1| dipeptide ABC superfamily ATP binding cassette transporter, membrane protein DppB [Mobiluncus mulieris ATCC 35239] Length=308 Score = 374 bits (960), Expect = 1e-101, Method: Compositional matrix adjust. Identities = 188/304 (62%), Positives = 234/304 (77%), Gaps = 0/304 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 Y+ RR+ ++PV +GAT +IY +VFL+PGDP+AAL GDR L PA L++ Y+LD PF+ Sbjct 4 YLGRRLLQIIPVLIGATFIIYALVFLMPGDPIAALGGDRGLPPAAETALKAKYNLDKPFI 63 Query 64 VQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLR 123 VQYL YL GI+ D G +SG V+ V+A AFPVTI+LA +ALA EA+ GI FG IAGLR Sbjct 64 VQYLLYLKGIMTFDFGLTFSGREVTEVMASAFPVTIKLAFMALAFEAIFGITFGTIAGLR 123 Query 124 QGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVLG 183 +GG+FD+ VL+ L +IA+P FV+GF+ QF+ GV+L P TV + + LL+P IVLG Sbjct 124 RGGVFDATVLIVSLFVIAVPTFVIGFVMQFIIGVKLGWLPTTVAGKDNFVSLLMPAIVLG 183 Query 184 AMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGA 243 A+SFAYV+RLTR +V+ AD+VRTA AKGL RV+ VHILRNSLIPV TFLGADLG Sbjct 184 AVSFAYVLRLTRQSVSETTSADFVRTAKAKGLKNGRVIRVHILRNSLIPVATFLGADLGG 243 Query 244 LMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDP 303 LMGGAIVTEGIF I+GVGG +YQA+ + E TVVS TVLVL+Y++ NLLVDLLYAALDP Sbjct 244 LMGGAIVTEGIFAINGVGGNIYQAIIKGEPATVVSFTTVLVLVYIVANLLVDLLYAALDP 303 Query 304 RIRY 307 RIRY Sbjct 304 RIRY 307 >gi|237784725|ref|YP_002905430.1| ABC transporter permease [Corynebacterium kroppenstedtii DSM 44385] gi|237757637|gb|ACR16887.1| ABC-type transport system, permease protein [Corynebacterium kroppenstedtii DSM 44385] Length=308 Score = 372 bits (956), Expect = 3e-101, Method: Compositional matrix adjust. Identities = 202/307 (66%), Positives = 248/307 (81%), Gaps = 0/307 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 M WY+ +R+ MVPVFLGAT LIY MVFL PGDPVAALAGD+PL+P + +RS YHLD Sbjct 1 MFWYIGKRLLQMVPVFLGATFLIYAMVFLTPGDPVAALAGDKPLSPEIIHSIRSQYHLDQ 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PF+VQYL YL GI GDLG+ +SG V VL +AFPVTIRLAL+A+ +E V GIGFGV+A Sbjct 61 PFIVQYLLYLKGIFTGDLGQTFSGQSVGTVLGNAFPVTIRLALMAIVIETVFGIGFGVLA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GL++GG+FDS VLV L IIA+PIFV+GF+AQFLFG++ I P TVG + LL+P Sbjct 121 GLKKGGLFDSTVLVISLFIIAVPIFVIGFVAQFLFGIKWGILPATVGAQGDFKHLLMPAF 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLG +SFAYV+RLTRS VA D+VRTA A+G+S+P+V+ H+LRNS+IPVVTF+GAD Sbjct 181 VLGLVSFAYVLRLTRSEVAEALGRDFVRTAYARGMSKPQVILHHVLRNSMIPVVTFIGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 L ALMGGAIVTEGIFNI+GVGG++Y AV E PTVVS+VTVLV+I++++NLL+DLLYA Sbjct 241 LAALMGGAIVTEGIFNINGVGGLVYHAVMLGEAPTVVSVVTVLVIIFVVSNLLIDLLYAL 300 Query 301 LDPRIRY 307 LDPRIRY Sbjct 301 LDPRIRY 307 >gi|334564087|ref|ZP_08517078.1| ABC transporter permease protein [Corynebacterium bovis DSM 20582] Length=308 Score = 372 bits (955), Expect = 3e-101, Method: Compositional matrix adjust. Identities = 203/307 (67%), Positives = 251/307 (82%), Gaps = 0/307 (0%) Query 1 MGWYVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDD 60 M WY+ RR+ ++PVF GAT LIY MVFL PGDP ALAG++ +PAV +R YHLD Sbjct 1 MLWYIGRRLLQLIPVFFGATFLIYAMVFLTPGDPALALAGEKATSPAVLDAIRERYHLDR 60 Query 61 PFLVQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIA 120 PF+VQYL Y+ GI GDLG +S PV+ VLA AFPVT+RLA++AL +E VLG+GFGV+A Sbjct 61 PFIVQYLLYIKGIFQGDLGMTFSDRPVAEVLAEAFPVTLRLAVMALVIETVLGVGFGVVA 120 Query 121 GLRQGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGI 180 GLR+G FDS +LV LVIIA+PIFV+GF++QFLFG++ + P TVG S GRLLLP + Sbjct 121 GLRKGSWFDSTLLVVSLVIIAVPIFVIGFVSQFLFGIRWGLVPPTVGSHGSFGRLLLPAV 180 Query 181 VLGAMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGAD 240 VLG +SFAYV+RLTRS VA N AD+VRTATA+GLSR RV+ H+LRNSLIPVVTF+GAD Sbjct 181 VLGLVSFAYVLRLTRSEVAGNLQADFVRTATARGLSRGRVIRDHVLRNSLIPVVTFIGAD 240 Query 241 LGALMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAA 300 L +LMGGAIVTEGIFNIHGVGG+++QAVT E+PTVVS+VTVLV++++++NLL+DLLYA Sbjct 241 LASLMGGAIVTEGIFNIHGVGGLVFQAVTLGESPTVVSVVTVLVIVFVVSNLLIDLLYAL 300 Query 301 LDPRIRY 307 LDPRIRY Sbjct 301 LDPRIRY 307 >gi|296118079|ref|ZP_06836661.1| peptide ABC transporter, permease protein [Corynebacterium ammoniagenes DSM 20306] gi|295968965|gb|EFG82208.1| peptide ABC transporter, permease protein [Corynebacterium ammoniagenes DSM 20306] Length=308 Score = 372 bits (955), Expect = 4e-101, Method: Compositional matrix adjust. Identities = 185/304 (61%), Positives = 234/304 (77%), Gaps = 0/304 (0%) Query 4 YVARRVAVMVPVFLGATLLIYGMVFLLPGDPVAALAGDRPLTPAVAAQLRSHYHLDDPFL 63 Y+ RRV M+PVF GATLLIY +VFL+PGDPV AL GDR LT A A++ + Y+LD PF+ Sbjct 4 YIGRRVLQMIPVFFGATLLIYALVFLMPGDPVEALGGDRGLTDAARARIEAEYNLDKPFI 63 Query 64 VQYLRYLGGILHGDLGRAYSGLPVSAVLAHAFPVTIRLALIALAVEAVLGIGFGVIAGLR 123 VQYL Y+ GIL D G +SG+PV+ V+ + FPVT++LA +A+ E + GI FGV +G+R Sbjct 64 VQYLLYVKGILTLDFGTTFSGVPVTEVMRNVFPVTLKLAFMAIIFETIFGIAFGVFSGIR 123 Query 124 QGGIFDSAVLVTGLVIIAIPIFVLGFLAQFLFGVQLEIAPVTVGERASVGRLLLPGIVLG 183 +GG FDS VLV L++IA+P FV GF+ Q++ G++ ++ PVTVG S LL+P IVLG Sbjct 124 RGGFFDSTVLVVSLLVIAVPSFVTGFVFQYIVGIRWDLLPVTVGRDESFQSLLMPAIVLG 183 Query 184 AMSFAYVVRLTRSAVAANAHADYVRTATAKGLSRPRVVTVHILRNSLIPVVTFLGADLGA 243 A+S AY++RLTR +V+ N ADYVRTA AKG+S V+T H+LRNSLIPV TF+GADLG+ Sbjct 184 ALSCAYIIRLTRQSVSENMRADYVRTARAKGMSGGSVMTRHVLRNSLIPVATFIGADLGS 243 Query 244 LMGGAIVTEGIFNIHGVGGVLYQAVTRQETPTVVSIVTVLVLIYLITNLLVDLLYAALDP 303 LM GAIVTEGIF I+GVGG LYQA+ R E T+VS TVLV+IY+I NLLVDLLYA LDP Sbjct 244 LMTGAIVTEGIFGINGVGGTLYQAILRGEPTTIVSFTTVLVVIYIIANLLVDLLYAVLDP 303 Query 304 RIRY 307 RIRY Sbjct 304 RIRY 307 Lambda K H 0.329 0.146 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 524399257434 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40