BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3673c
Length=227
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610809|ref|NP_218190.1| membrane-anchored thioredoxin-like ... 447 7e-124
gi|294995421|ref|ZP_06801112.1| membrane-anchored thioredoxin [M... 446 2e-123
gi|289441105|ref|ZP_06430849.1| membrane-anchored thioredoxin [M... 444 7e-123
gi|340628645|ref|YP_004747097.1| putative membrane-anchored thio... 442 2e-122
gi|289748186|ref|ZP_06507564.1| LOW QUALITY PROTEIN: membrane-an... 427 4e-118
gi|308232526|ref|ZP_07664109.1| membrane-anchored thioredoxin [M... 423 1e-116
gi|339300080|gb|AEJ52190.1| membrane-anchored thioredoxin [Mycob... 422 2e-116
gi|254820839|ref|ZP_05225840.1| hypothetical protein MintA_12973... 296 2e-78
gi|118463887|ref|YP_879738.1| hypothetical protein MAV_0456 [Myc... 295 4e-78
gi|41406499|ref|NP_959335.1| hypothetical protein MAP0401 [Mycob... 294 8e-78
gi|336460823|gb|EGO39708.1| thiol-disulfide isomerase-like thior... 292 3e-77
gi|342861990|ref|ZP_08718634.1| hypothetical protein MCOL_23985 ... 290 7e-77
gi|296166730|ref|ZP_06849154.1| membrane-anchored thioredoxin fa... 278 5e-73
gi|15828232|ref|NP_302495.1| hypothetical protein ML2300 [Mycoba... 270 1e-70
gi|183985131|ref|YP_001853422.1| membrane-anchored thioredoxin-l... 261 4e-68
gi|118619414|ref|YP_907746.1| membrane-anchored thioredoxin-like... 245 4e-63
gi|118470253|ref|YP_890406.1| hypothetical protein MSMEG_6186 [M... 240 1e-61
gi|108801778|ref|YP_641975.1| redoxin [Mycobacterium sp. MCS] >g... 234 8e-60
gi|315446295|ref|YP_004079174.1| thiol-disulfide isomerase-like ... 225 4e-57
gi|120406379|ref|YP_956208.1| redoxin domain-containing protein ... 221 8e-56
gi|145221966|ref|YP_001132644.1| alkyl hydroperoxide reductase/ ... 216 2e-54
gi|169627523|ref|YP_001701172.1| hypothetical protein MAB_0419 [... 214 6e-54
gi|333992591|ref|YP_004525205.1| membrane-anchored thioredoxin-l... 191 5e-47
gi|240172677|ref|ZP_04751336.1| membrane-anchored thioredoxin-li... 174 8e-42
gi|254773462|ref|ZP_05214978.1| hypothetical protein MaviaA2_021... 159 3e-37
gi|111021300|ref|YP_704272.1| thioredoxin [Rhodococcus jostii RH... 152 4e-35
gi|333917946|ref|YP_004491527.1| putative thiol-disulfide oxidor... 145 6e-33
gi|226363644|ref|YP_002781426.1| thiol-disulfide oxidoreductase ... 139 2e-31
gi|312137992|ref|YP_004005328.1| thioredoxin [Rhodococcus equi 1... 139 3e-31
gi|325675282|ref|ZP_08154967.1| thioredoxin [Rhodococcus equi AT... 139 3e-31
gi|226303972|ref|YP_002763930.1| thiol-disulfide oxidoreductase ... 138 5e-31
gi|229492163|ref|ZP_04385972.1| antioxidant, AhpC/TSA family [Rh... 135 6e-30
gi|262200523|ref|YP_003271731.1| alkyl hydroperoxide reductase/ ... 131 9e-29
gi|54022313|ref|YP_116555.1| hypothetical protein nfa3490 [Nocar... 130 1e-28
gi|343926476|ref|ZP_08765981.1| putative thiol-disulfide oxidore... 130 2e-28
gi|331700213|ref|YP_004336452.1| alkyl hydroperoxide reductase/ ... 119 4e-25
gi|296141597|ref|YP_003648840.1| redoxin [Tsukamurella paurometa... 117 2e-24
gi|326383485|ref|ZP_08205172.1| alkyl hydroperoxide reductase/ T... 108 4e-22
gi|256374411|ref|YP_003098071.1| alkyl hydroperoxide reductase/ ... 104 9e-21
gi|237786549|ref|YP_002907254.1| hypothetical protein ckrop_2004... 102 4e-20
gi|145294425|ref|YP_001137246.1| hypothetical protein cgR_0380 [... 101 7e-20
gi|344045216|gb|EGV40889.1| hypothetical protein CgS9114_06002 [... 101 7e-20
gi|19551544|ref|NP_599546.1| thiol-disulfide isomerase [Coryneba... 100 2e-19
gi|291010077|ref|ZP_06568050.1| redoxin [Saccharopolyspora eryth... 98.6 6e-19
gi|134096946|ref|YP_001102607.1| redoxin [Saccharopolyspora eryt... 97.8 9e-19
gi|25026846|ref|NP_736900.1| hypothetical protein CE0290 [Coryne... 94.4 1e-17
gi|300790633|ref|YP_003770924.1| redoxin [Amycolatopsis mediterr... 94.0 1e-17
gi|340795427|ref|YP_004760890.1| hypothetical protein CVAR_2472 ... 92.8 3e-17
gi|302530868|ref|ZP_07283210.1| redoxin [Streptomyces sp. AA4] >... 92.0 5e-17
gi|38232926|ref|NP_938693.1| hypothetical protein DIP0305 [Coryn... 92.0 6e-17
>gi|15610809|ref|NP_218190.1| membrane-anchored thioredoxin-like protein [Mycobacterium tuberculosis
H37Rv]
gi|15843290|ref|NP_338327.1| thioredoxin-related protein [Mycobacterium tuberculosis CDC1551]
gi|31794843|ref|NP_857336.1| membrane-anchored thioredoxin-like protein [Mycobacterium bovis
AF2122/97]
43 more sequence titles
Length=227
Score = 447 bits (1149), Expect = 7e-124, Method: Compositional matrix adjust.
Identities = 227/227 (100%), Positives = 227/227 (100%), Gaps = 0/227 (0%)
Query 1 MPSLPTTPAETAMTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHR 60
MPSLPTTPAETAMTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHR
Sbjct 1 MPSLPTTPAETAMTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHR 60
Query 61 DGDTPEALAWSRQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVIN 120
DGDTPEALAWSRQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVIN
Sbjct 61 DGDTPEALAWSRQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVIN 120
Query 121 LWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRR 180
LWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRR
Sbjct 121 LWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRR 180
Query 181 RVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
RVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG
Sbjct 181 RVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
>gi|294995421|ref|ZP_06801112.1| membrane-anchored thioredoxin [Mycobacterium tuberculosis 210]
Length=227
Score = 446 bits (1146), Expect = 2e-123, Method: Compositional matrix adjust.
Identities = 226/227 (99%), Positives = 227/227 (100%), Gaps = 0/227 (0%)
Query 1 MPSLPTTPAETAMTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHR 60
MPSLPTTPAETAMTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHR
Sbjct 1 MPSLPTTPAETAMTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHR 60
Query 61 DGDTPEALAWSRQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVIN 120
DGDTPEALAWSRQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVIN
Sbjct 61 DGDTPEALAWSRQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVIN 120
Query 121 LWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRR 180
LWAHWCAPCMTELPVM+EYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRR
Sbjct 121 LWAHWCAPCMTELPVMSEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRR 180
Query 181 RVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
RVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG
Sbjct 181 RVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
>gi|289441105|ref|ZP_06430849.1| membrane-anchored thioredoxin [Mycobacterium tuberculosis T46]
gi|289571913|ref|ZP_06452140.1| membrane-anchored thioredoxin [Mycobacterium tuberculosis T17]
gi|289414024|gb|EFD11264.1| membrane-anchored thioredoxin [Mycobacterium tuberculosis T46]
gi|289545667|gb|EFD49315.1| membrane-anchored thioredoxin [Mycobacterium tuberculosis T17]
Length=227
Score = 444 bits (1141), Expect = 7e-123, Method: Compositional matrix adjust.
Identities = 226/227 (99%), Positives = 226/227 (99%), Gaps = 0/227 (0%)
Query 1 MPSLPTTPAETAMTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHR 60
MPSLPTTPAETAMTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQ PAPREHR
Sbjct 1 MPSLPTTPAETAMTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQGPAPREHR 60
Query 61 DGDTPEALAWSRQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVIN 120
DGDTPEALAWSRQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVIN
Sbjct 61 DGDTPEALAWSRQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVIN 120
Query 121 LWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRR 180
LWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRR
Sbjct 121 LWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRR 180
Query 181 RVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
RVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG
Sbjct 181 RVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
>gi|340628645|ref|YP_004747097.1| putative membrane-anchored thioredoxin-like protein [Mycobacterium
canettii CIPT 140010059]
gi|340006835|emb|CCC46024.1| putative membrane-anchored thioredoxin-like protein (thiol-disulfide
interchange related protein) [Mycobacterium canettii
CIPT 140010059]
Length=227
Score = 442 bits (1136), Expect = 2e-122, Method: Compositional matrix adjust.
Identities = 225/227 (99%), Positives = 225/227 (99%), Gaps = 0/227 (0%)
Query 1 MPSLPTTPAETAMTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHR 60
MPSLPTTPAETAMTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASS ISQRPAPREHR
Sbjct 1 MPSLPTTPAETAMTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSMISQRPAPREHR 60
Query 61 DGDTPEALAWSRQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVIN 120
DGDTPEALAWSRQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVIN
Sbjct 61 DGDTPEALAWSRQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVIN 120
Query 121 LWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRR 180
LWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQ QNEAAALSRLADLGVRLPTLQDDRR
Sbjct 121 LWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQDQNEAAALSRLADLGVRLPTLQDDRR 180
Query 181 RVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
RVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG
Sbjct 181 RVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
>gi|289748186|ref|ZP_06507564.1| LOW QUALITY PROTEIN: membrane-anchored thioredoxin [Mycobacterium
tuberculosis T92]
gi|289688773|gb|EFD56202.1| LOW QUALITY PROTEIN: membrane-anchored thioredoxin [Mycobacterium
tuberculosis T92]
Length=228
Score = 427 bits (1099), Expect = 4e-118, Method: Compositional matrix adjust.
Identities = 218/219 (99%), Positives = 218/219 (99%), Gaps = 0/219 (0%)
Query 1 MPSLPTTPAETAMTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHR 60
MPSLPTTPAETAMTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQ PAPREHR
Sbjct 1 MPSLPTTPAETAMTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQGPAPREHR 60
Query 61 DGDTPEALAWSRQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVIN 120
DGDTPEALAWSRQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVIN
Sbjct 61 DGDTPEALAWSRQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVIN 120
Query 121 LWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRR 180
LWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRR
Sbjct 121 LWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRR 180
Query 181 RVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIV 219
RVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIV
Sbjct 181 RVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIV 219
>gi|308232526|ref|ZP_07664109.1| membrane-anchored thioredoxin [Mycobacterium tuberculosis SUMu001]
gi|308369189|ref|ZP_07666680.1| membrane-anchored thioredoxin [Mycobacterium tuberculosis SUMu002]
gi|308371409|ref|ZP_07667155.1| membrane-anchored thioredoxin [Mycobacterium tuberculosis SUMu003]
22 more sequence titles
Length=215
Score = 423 bits (1087), Expect = 1e-116, Method: Compositional matrix adjust.
Identities = 215/215 (100%), Positives = 215/215 (100%), Gaps = 0/215 (0%)
Query 13 MTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHRDGDTPEALAWSR 72
MTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHRDGDTPEALAWSR
Sbjct 1 MTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHRDGDTPEALAWSR 60
Query 73 QRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTE 132
QRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTE
Sbjct 61 QRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTE 120
Query 133 LPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVM 192
LPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVM
Sbjct 121 LPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVM 180
Query 193 PATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
PATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG
Sbjct 181 PATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 215
>gi|339300080|gb|AEJ52190.1| membrane-anchored thioredoxin [Mycobacterium tuberculosis CCDC5180]
Length=215
Score = 422 bits (1085), Expect = 2e-116, Method: Compositional matrix adjust.
Identities = 214/215 (99%), Positives = 215/215 (100%), Gaps = 0/215 (0%)
Query 13 MTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHRDGDTPEALAWSR 72
MTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHRDGDTPEALAWSR
Sbjct 1 MTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHRDGDTPEALAWSR 60
Query 73 QRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTE 132
QRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTE
Sbjct 61 QRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTE 120
Query 133 LPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVM 192
LPVM+EYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVM
Sbjct 121 LPVMSEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVM 180
Query 193 PATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
PATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG
Sbjct 181 PATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 215
>gi|254820839|ref|ZP_05225840.1| hypothetical protein MintA_12973 [Mycobacterium intracellulare
ATCC 13950]
Length=215
Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/215 (74%), Positives = 171/215 (80%), Gaps = 3/215 (1%)
Query 16 LTGKTRWTIAILAVVAALMAALVAQLHDYSASS---TISQRPAPREHRDGDTPEALAWSR 72
++ TRWTIAILAVV AL+AALVAQL D SA+ + A REHRD DTP ALA R
Sbjct 1 MSRTTRWTIAILAVVVALIAALVAQLRDNSATPGTPATDRAAANREHRDADTPAALAGPR 60
Query 73 QRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTE 132
QRA L PCPAA +GPG ALRGV CA DGS VDVARA+AGRRVV+NLWA+WCAPC E
Sbjct 61 QRAGLAPCPAAASGPGPEALRGVTAECAADGSVVDVARAVAGRRVVLNLWAYWCAPCAAE 120
Query 133 LPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVM 192
LP MAEYQRRVG V VVTVHQ +NE AAL RLA+LGVRLPTLQD RRRVAAALRV NVM
Sbjct 121 LPAMAEYQRRVGSDVTVVTVHQDENETAALLRLAELGVRLPTLQDGRRRVAAALRVVNVM 180
Query 193 PATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
PATVVLRPDGSVAQTLPRAF +ADEI AA+G D G
Sbjct 181 PATVVLRPDGSVAQTLPRAFTTADEIAAAIGTDRG 215
>gi|118463887|ref|YP_879738.1| hypothetical protein MAV_0456 [Mycobacterium avium 104]
gi|118165174|gb|ABK66071.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=222
Score = 295 bits (754), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 156/216 (73%), Positives = 170/216 (79%), Gaps = 3/216 (1%)
Query 15 TLTGKTRWTIAILAVVAALMAALVAQLHDYSASS---TISQRPAPREHRDGDTPEALAWS 71
TLT K RW IAILAVV AL+ AL+AQL D +A+ + A REHRD DTP ALA
Sbjct 7 TLTRKVRWHIAILAVVVALIVALLAQLRDDAATPGPPATGRVVADREHRDADTPAALAGP 66
Query 72 RQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMT 131
RQRA+LPPCPAAG GPG AALRGV CA DGS VD RA+AGRRVV+N WA+WCAPC
Sbjct 67 RQRADLPPCPAAGTGPGPAALRGVTAECAADGSVVDAGRAVAGRRVVLNFWAYWCAPCAA 126
Query 132 ELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANV 191
ELP MAEYQRR G V V+TVHQ +NE AAL RLA+LGVRLPTLQD RRRVAAALRV NV
Sbjct 127 ELPAMAEYQRRAGAEVTVLTVHQDENETAALLRLAELGVRLPTLQDGRRRVAAALRVVNV 186
Query 192 MPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
MPATVVLRPDGSVAQTLPRAF +ADEI AA+GND G
Sbjct 187 MPATVVLRPDGSVAQTLPRAFSTADEIAAAIGNDRG 222
>gi|41406499|ref|NP_959335.1| hypothetical protein MAP0401 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394848|gb|AAS02718.1| hypothetical protein MAP_0401 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=222
Score = 294 bits (752), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 155/216 (72%), Positives = 169/216 (79%), Gaps = 3/216 (1%)
Query 15 TLTGKTRWTIAILAVVAALMAALVAQLHDYSASS---TISQRPAPREHRDGDTPEALAWS 71
TLT K RW IAIL VV AL+ AL+AQL D +A+ + A REHRD DTP ALA
Sbjct 7 TLTRKVRWHIAILTVVVALIVALLAQLRDDAATPGPPATGRAVADREHRDADTPAALAGP 66
Query 72 RQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMT 131
RQRA+LPPCPAAG GPG AALRGV CA DGS VD RA+AGRRVV+N WA+WCAPC
Sbjct 67 RQRADLPPCPAAGTGPGPAALRGVTAECAADGSVVDAGRAVAGRRVVLNFWAYWCAPCAA 126
Query 132 ELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANV 191
ELP MAEYQRR G V V+TVHQ +NE AAL RLA+LGVRLPTLQD RRRVAAALRV NV
Sbjct 127 ELPAMAEYQRRAGAEVTVLTVHQDENETAALLRLAELGVRLPTLQDGRRRVAAALRVVNV 186
Query 192 MPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
MPATVVLRPDGSVAQTLPRAF +ADEI AA+GND G
Sbjct 187 MPATVVLRPDGSVAQTLPRAFSTADEIAAAIGNDRG 222
>gi|336460823|gb|EGO39708.1| thiol-disulfide isomerase-like thioredoxin [Mycobacterium avium
subsp. paratuberculosis S397]
Length=222
Score = 292 bits (747), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/216 (72%), Positives = 168/216 (78%), Gaps = 3/216 (1%)
Query 15 TLTGKTRWTIAILAVVAALMAALVAQLHDYSASS---TISQRPAPREHRDGDTPEALAWS 71
TLT K RW AIL VV AL+ AL+AQL D +A+ + A REHRD DTP ALA
Sbjct 7 TLTRKVRWHTAILTVVVALIVALLAQLRDDAATPGPPATGRAVADREHRDADTPAALAGP 66
Query 72 RQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMT 131
RQRA+LPPCPAAG GPG AALRGV CA DGS VD RA+AGRRVV+N WA+WCAPC
Sbjct 67 RQRADLPPCPAAGTGPGPAALRGVTAECAADGSVVDAGRAVAGRRVVLNFWAYWCAPCAA 126
Query 132 ELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANV 191
ELP MAEYQRR G V V+TVHQ +NE AAL RLA+LGVRLPTLQD RRRVAAALRV NV
Sbjct 127 ELPAMAEYQRRAGAEVTVLTVHQDENETAALLRLAELGVRLPTLQDGRRRVAAALRVVNV 186
Query 192 MPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
MPATVVLRPDGSVAQTLPRAF +ADEI AA+GND G
Sbjct 187 MPATVVLRPDGSVAQTLPRAFSTADEIAAAIGNDRG 222
>gi|342861990|ref|ZP_08718634.1| hypothetical protein MCOL_23985 [Mycobacterium colombiense CECT
3035]
gi|342130530|gb|EGT83839.1| hypothetical protein MCOL_23985 [Mycobacterium colombiense CECT
3035]
Length=215
Score = 290 bits (743), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 163/215 (76%), Positives = 176/215 (82%), Gaps = 3/215 (1%)
Query 16 LTGKTRWTIAILAVVAALMAALVAQLHDYSASSTI--SQRP-APREHRDGDTPEALAWSR 72
+T K RW IAILAVVAAL+ ALVAQL D SA+++ + RP A REHRD DTP ALA R
Sbjct 1 MTRKARWHIAILAVVAALIVALVAQLRDDSATTSTPATDRPVADREHRDADTPAALAGPR 60
Query 73 QRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTE 132
QRANLPPCP AG G G AALRGV CA DGS VDVARALAGRRVV+NLWA+WCAPC E
Sbjct 61 QRANLPPCPGAGAGDGPAALRGVTADCAADGSPVDVARALAGRRVVLNLWAYWCAPCAAE 120
Query 133 LPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVM 192
LP MAEYQRR G V+VVTVHQ +NE AAL RLA+LGVRLPTLQD RRRVAAALRV NVM
Sbjct 121 LPAMAEYQRRAGSDVMVVTVHQDENETAALLRLAELGVRLPTLQDGRRRVAAALRVVNVM 180
Query 193 PATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
PATVVLRPDGSVAQTLPRAF +ADEI AA+GND G
Sbjct 181 PATVVLRPDGSVAQTLPRAFTTADEIAAAIGNDRG 215
>gi|296166730|ref|ZP_06849154.1| membrane-anchored thioredoxin family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897900|gb|EFG77482.1| membrane-anchored thioredoxin family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=215
Score = 278 bits (710), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 162/215 (76%), Positives = 174/215 (81%), Gaps = 3/215 (1%)
Query 16 LTGKTRWTIAILAVVAALMAALVAQLHDYSASSTI--SQRPAP-REHRDGDTPEALAWSR 72
+T TRWTIAILAVVAAL AALVA+L D SA++ + R AP REHRD DT ALA R
Sbjct 1 MTRTTRWTIAILAVVAALTAALVAELRDDSATTPTPGTARNAPDREHRDADTAAALAGPR 60
Query 73 QRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTE 132
QRA+L PCP AG+GPG AAL GV CA DGS VDVARALAGRRVV+NLWA+WCAPC E
Sbjct 61 QRADLAPCPTAGDGPGPAALHGVTAECAADGSVVDVARALAGRRVVLNLWAYWCAPCAAE 120
Query 133 LPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVM 192
LP MAEYQRR GP V V+TVHQ +NE AAL RLA+LGVRLPTLQD RRRVAAAL VANVM
Sbjct 121 LPAMAEYQRRAGPDVTVLTVHQDENETAALLRLAELGVRLPTLQDGRRRVAAALGVANVM 180
Query 193 PATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
PATVVLRPDGSVAQ LPRAF SADEI AAVGND G
Sbjct 181 PATVVLRPDGSVAQMLPRAFDSADEIAAAVGNDKG 215
>gi|15828232|ref|NP_302495.1| hypothetical protein ML2300 [Mycobacterium leprae TN]
gi|221230709|ref|YP_002504125.1| hypothetical protein MLBr_02300 [Mycobacterium leprae Br4923]
gi|13093925|emb|CAC31816.1| putative membrane protein [Mycobacterium leprae]
gi|219933816|emb|CAR72398.1| putative membrane protein [Mycobacterium leprae Br4923]
Length=215
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/215 (72%), Positives = 168/215 (79%), Gaps = 0/215 (0%)
Query 13 MTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHRDGDTPEALAWSR 72
M TLT KT TI +LAVV AL+AALV QL D + + ++Q REHRD DTP ALA R
Sbjct 1 MKTLTPKTCGTIVVLAVVVALVAALVGQLRDNARTIEMTQATIEREHRDADTPAALAGPR 60
Query 73 QRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTE 132
+ ANLPPCP AG+GPG A LRGVV+ CA DG AVDVARALAGRRVV+NLWA WCA C+ E
Sbjct 61 EHANLPPCPDAGSGPGPAVLRGVVLECASDGFAVDVARALAGRRVVLNLWASWCASCLGE 120
Query 133 LPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVM 192
LP M EYQRRVG V+VVTVHQ +NE AAL RLA LGVRLPTLQD RRRVAAA VANV+
Sbjct 121 LPAMVEYQRRVGSDVMVVTVHQDENEMAALLRLAQLGVRLPTLQDGRRRVAAAFGVANVI 180
Query 193 PATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
P TVVLRPDGSVAQTLPRA S D+I AAVGND G
Sbjct 181 PTTVVLRPDGSVAQTLPRALVSVDQIAAAVGNDTG 215
>gi|183985131|ref|YP_001853422.1| membrane-anchored thioredoxin-like protein [Mycobacterium marinum
M]
gi|183178457|gb|ACC43567.1| membrane-anchored thioredoxin-like protein [Mycobacterium marinum
M]
Length=217
Score = 261 bits (668), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 152/214 (72%), Positives = 171/214 (80%), Gaps = 0/214 (0%)
Query 13 MTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHRDGDTPEALAWSR 72
+T LT RWTIA+LAVV AL+ AL AQL + S + + P REHRD DTP ALA R
Sbjct 4 LTRLTPGARWTIAVLAVVVALIIALAAQLREGSGPAGHTGAPVAREHRDADTPAALAGPR 63
Query 73 QRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTE 132
+RANLPPCPA G GPG A L+GVVV CA +G+ VDVA A+AGRRV++NLWA+WCA C E
Sbjct 64 RRANLPPCPAGGAGPGPARLQGVVVECAANGAPVDVASAVAGRRVLLNLWAYWCAECTAE 123
Query 133 LPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVM 192
LP +AEYQRRVG V V+TVHQ +NEAAAL LADLGVRLPTLQD RR+VAAAL VANVM
Sbjct 124 LPALAEYQRRVGSEVTVLTVHQDENEAAALVELADLGVRLPTLQDGRRKVAAALGVANVM 183
Query 193 PATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDA 226
PATV+LRPDGSVAQTLPRAFGSADEI AAVGN A
Sbjct 184 PATVLLRPDGSVAQTLPRAFGSADEIAAAVGNPA 217
>gi|118619414|ref|YP_907746.1| membrane-anchored thioredoxin-like protein [Mycobacterium ulcerans
Agy99]
gi|118571524|gb|ABL06275.1| membrane-anchored thioredoxin-like protein [Mycobacterium ulcerans
Agy99]
Length=201
Score = 245 bits (625), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 143/201 (72%), Positives = 162/201 (81%), Gaps = 0/201 (0%)
Query 26 ILAVVAALMAALVAQLHDYSASSTISQRPAPREHRDGDTPEALAWSRQRANLPPCPAAGN 85
+LAVV AL+ AL AQL + S S+ + P REHRD DTP ALA R+R+NLPPCPA G
Sbjct 1 MLAVVVALIIALAAQLREGSGSAGHTGAPVAREHRDADTPAALAGPRRRSNLPPCPAGGA 60
Query 86 GPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTELPVMAEYQRRVGP 145
GPG A L+GVVV CA +G+ VDVA A+AGRRV++NLWA+WCA C ELP +AEYQRRVG
Sbjct 61 GPGPARLQGVVVECAANGAPVDVASAVAGRRVLLNLWAYWCAECTAELPALAEYQRRVGS 120
Query 146 AVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVMPATVVLRPDGSVA 205
V V+TVHQ +NEAAAL LADLGVRLPTLQD RR+VAAAL VANVMPATV+LRPDGSVA
Sbjct 121 EVTVLTVHQDENEAAALVELADLGVRLPTLQDGRRKVAAALGVANVMPATVLLRPDGSVA 180
Query 206 QTLPRAFGSADEIVAAVGNDA 226
QTLPRAFGSADEI AAV N A
Sbjct 181 QTLPRAFGSADEIAAAVENPA 201
>gi|118470253|ref|YP_890406.1| hypothetical protein MSMEG_6186 [Mycobacterium smegmatis str.
MC2 155]
gi|118171540|gb|ABK72436.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=215
Score = 240 bits (612), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/208 (66%), Positives = 155/208 (75%), Gaps = 2/208 (0%)
Query 16 LTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAP-REHRDGDTPEALAWSRQR 74
++ TRWT+A+L V+ AL A +L D A+ A R+HRD DTPEALA R R
Sbjct 1 MSVSTRWTVAVLVVLLALGTAFWLELRDDGAAPGAEAPSATARDHRDADTPEALAEPRAR 60
Query 75 ANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTELP 134
A+LPPCP GNG G ALRG+ + CAGDG VDVA ALAGR VV+NLWA+WC PC ELP
Sbjct 61 ADLPPCPGPGNGQGPEALRGMTLECAGDGDPVDVAAALAGRPVVLNLWAYWCGPCADELP 120
Query 135 VMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVMPA 194
MAEYQRR P VLV+TVHQ +NE AAL RLA+LGVRLPTLQD RR VAAAL+V NVMPA
Sbjct 121 AMAEYQRR-NPDVLVLTVHQDENETAALLRLAELGVRLPTLQDGRRLVAAALKVPNVMPA 179
Query 195 TVVLRPDGSVAQTLPRAFGSADEIVAAV 222
TVVLRPDGSVA+ LPR+F ADEI AAV
Sbjct 180 TVVLRPDGSVAEILPRSFVDADEIAAAV 207
>gi|108801778|ref|YP_641975.1| redoxin [Mycobacterium sp. MCS]
gi|119870929|ref|YP_940881.1| redoxin domain-containing protein [Mycobacterium sp. KMS]
gi|126437766|ref|YP_001073457.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Mycobacterium sp. JLS]
gi|108772197|gb|ABG10919.1| Redoxin [Mycobacterium sp. MCS]
gi|119697018|gb|ABL94091.1| Redoxin domain protein [Mycobacterium sp. KMS]
gi|126237566|gb|ABO00967.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Mycobacterium sp. JLS]
Length=215
Score = 234 bits (597), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 135/213 (64%), Positives = 157/213 (74%), Gaps = 2/213 (0%)
Query 16 LTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAP-REHRDGDTPEALAWSRQR 74
++ TRWT+A+LAVV AL+ AL QL + A T PAP R+HRD DTPEALA R
Sbjct 1 MSTSTRWTVAVLAVVLALVVALSMQLAEDPAP-TRRDGPAPARDHRDADTPEALAGPRAE 59
Query 75 ANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTELP 134
A+LPPCP G G G +LRG+ + CAGDG VDVAR+LAGR VV+NLWA+WC PC ELP
Sbjct 60 ADLPPCPPPGVGAGPESLRGITLECAGDGQMVDVARSLAGRTVVLNLWAYWCGPCADELP 119
Query 135 VMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVMPA 194
MAEYQRRVG AV VVTVHQ +NE A L RLA+LGVRLPTLQD RR +AAA++ NVMPA
Sbjct 120 AMAEYQRRVGDAVTVVTVHQDENETAGLLRLAELGVRLPTLQDGRRLIAAAVKAPNVMPA 179
Query 195 TVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
TVVLR DGSVA +PR+F +ADEI AV G
Sbjct 180 TVVLRADGSVAGIVPRSFATADEIEEAVDQTMG 212
>gi|315446295|ref|YP_004079174.1| thiol-disulfide isomerase-like thioredoxin [Mycobacterium sp.
Spyr1]
gi|315264598|gb|ADU01340.1| thiol-disulfide isomerase-like thioredoxin [Mycobacterium sp.
Spyr1]
Length=218
Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 122/216 (57%), Positives = 151/216 (70%), Gaps = 4/216 (1%)
Query 16 LTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRP----APREHRDGDTPEALAWS 71
++ RW++ L ++ AL A ++L +S + R+ RD DTPEALA
Sbjct 1 MSASARWSVVALVILVALGVAFWSELDAQDPASPAGNDARDTVSARDKRDADTPEALAGP 60
Query 72 RQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMT 131
R A L PCPA G G G A LRG+V+ C GDG+ D+A A+AGR VV+NLWA+WC PC
Sbjct 61 RAAAALEPCPAPGEGQGPAPLRGIVLECVGDGTPTDIAAAVAGRPVVLNLWAYWCGPCAD 120
Query 132 ELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANV 191
ELP MAEYQRRVGP VLV+TVHQ +NE+AAL RLA+LGV LPT+QD RR +AAAL+V NV
Sbjct 121 ELPAMAEYQRRVGPEVLVLTVHQDENESAALIRLAELGVHLPTVQDGRRSIAAALQVPNV 180
Query 192 MPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
MPATVVLR DGSVA+ LPR+F +AD+I AAV G
Sbjct 181 MPATVVLRADGSVAEILPRSFATADDIAAAVDPKIG 216
>gi|120406379|ref|YP_956208.1| redoxin domain-containing protein [Mycobacterium vanbaalenii
PYR-1]
gi|119959197|gb|ABM16202.1| Redoxin domain protein [Mycobacterium vanbaalenii PYR-1]
Length=207
Score = 221 bits (562), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 130/204 (64%), Positives = 149/204 (74%), Gaps = 4/204 (1%)
Query 27 LAVVAALMAALVAQLHDYSASSTISQRPA--PREHRDGDTPEALAWSRQRANLPPCPAAG 84
L +V AL AAL A+L D S +QR A R+ RD DTPEALA R RA L PCP G
Sbjct 3 LVIVVALGAALWAEL-DADESQPRTQRDAISARDRRDADTPEALAGLRARAALEPCPTGG 61
Query 85 N-GPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTELPVMAEYQRRV 143
+ GPG LRG+ + C GDGS VDVA A+AGR VV+NLWA+WC PC ELP MAEYQRRV
Sbjct 62 DAGPGPETLRGIELECVGDGSRVDVAEAVAGRPVVLNLWAYWCGPCADELPAMAEYQRRV 121
Query 144 GPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVMPATVVLRPDGS 203
G AV V+TVHQ +NE+AAL RL +LGV LPTLQD RR +AAAL+V NVMPATVVLR DGS
Sbjct 122 GSAVTVLTVHQDENESAALLRLTELGVHLPTLQDGRRTIAAALQVPNVMPATVVLRADGS 181
Query 204 VAQTLPRAFGSADEIVAAVGNDAG 227
VA+ LPR+F +ADEI AAV G
Sbjct 182 VAEILPRSFATADEIAAAVDPKIG 205
>gi|145221966|ref|YP_001132644.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Mycobacterium gilvum PYR-GCK]
gi|145214452|gb|ABP43856.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Mycobacterium gilvum PYR-GCK]
Length=209
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/204 (59%), Positives = 146/204 (72%), Gaps = 0/204 (0%)
Query 24 IAILAVVAALMAALVAQLHDYSASSTISQRPAPREHRDGDTPEALAWSRQRANLPPCPAA 83
+ ++A+ A + L AQ A + + R+ RD DTPEALA R A L PCPA
Sbjct 4 VILVALGVAFWSELDAQDPASPAGNDARDTVSARDKRDADTPEALAGLRAAAGLEPCPAP 63
Query 84 GNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTELPVMAEYQRRV 143
G G G A LRG+V+ C GDG+ D+A A+AGR VV+NLWA+WC PC ELP MAEYQRRV
Sbjct 64 GEGQGPAPLRGIVLECVGDGAPTDIAAAVAGRPVVLNLWAYWCGPCADELPAMAEYQRRV 123
Query 144 GPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVMPATVVLRPDGS 203
GP VLV+TVHQ +NE+AAL RLA+LGV LPT+QD RR +AAAL+V NVMPATVVLR DGS
Sbjct 124 GPEVLVLTVHQDENESAALIRLAELGVHLPTVQDGRRSIAAALQVPNVMPATVVLRADGS 183
Query 204 VAQTLPRAFGSADEIVAAVGNDAG 227
VA+ LPR+F +AD+I AAV G
Sbjct 184 VAEILPRSFATADDIAAAVDPKIG 207
>gi|169627523|ref|YP_001701172.1| hypothetical protein MAB_0419 [Mycobacterium abscessus ATCC 19977]
gi|169239490|emb|CAM60518.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=217
Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 118/216 (55%), Positives = 146/216 (68%), Gaps = 3/216 (1%)
Query 13 MTTLTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRP-APREHRDGDTPEALAWS 71
M L RWTIA + +VAAL+A +++Q HD Q+ A RE RD +TPEALA
Sbjct 1 MARLNTGARWTIAGVVLVAALIAVMLSQQHDQQRRGPQGQQQVAARERRDAETPEALAEL 60
Query 72 RQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMT 131
R++A LP CPAA PG AL G+ + C+G V V LAGR+VV+NLWA+WC PC
Sbjct 61 RRQAQLPSCPAANPDPGTPALAGITLECSG--VRVPVGPVLAGRQVVLNLWAYWCGPCAD 118
Query 132 ELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANV 191
ELP MAE QRR G + V+TVHQ +NEAA L+RLA+L VRLP +QD RR+AAAL+ NV
Sbjct 119 ELPAMAELQRRAGDKLTVITVHQDENEAAGLNRLAELHVRLPMIQDGARRIAAALKSPNV 178
Query 192 MPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
MP T+++R DGSVAQ LPR+F SADEI A V G
Sbjct 179 MPTTILIRADGSVAQVLPRSFTSADEIGAEVEQALG 214
>gi|333992591|ref|YP_004525205.1| membrane-anchored thioredoxin-like protein [Mycobacterium sp.
JDM601]
gi|333488559|gb|AEF37951.1| membrane-anchored thioredoxin-like protein [Mycobacterium sp.
JDM601]
Length=210
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 107/153 (70%), Positives = 120/153 (79%), Gaps = 0/153 (0%)
Query 72 RQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMT 131
R+RA LPPC A +G G AALRGV V CA DG+ VDVA AGRRVV+NLWA+WC PC
Sbjct 55 RERAGLPPCRDASDGAGPAALRGVTVACAADGAPVDVAAMFAGRRVVLNLWAYWCRPCRD 114
Query 132 ELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANV 191
ELP AEYQRR GP V VVTVHQ N+AA L+ LA+LGVRLPTLQD RR+VAAALRV NV
Sbjct 115 ELPAFAEYQRRAGPDVTVVTVHQDDNQAAGLALLAELGVRLPTLQDGRRQVAAALRVPNV 174
Query 192 MPATVVLRPDGSVAQTLPRAFGSADEIVAAVGN 224
MPATVVL DGSVA+ LP++F +ADEI AAVG
Sbjct 175 MPATVVLAMDGSVARILPQSFATADEIAAAVGG 207
>gi|240172677|ref|ZP_04751336.1| membrane-anchored thioredoxin-like protein [Mycobacterium kansasii
ATCC 12478]
Length=107
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 85/106 (81%), Positives = 94/106 (89%), Gaps = 0/106 (0%)
Query 121 LWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRR 180
LWA+WC C+ ELP MAEYQ+RVGP V+VVTVHQ +NE AAL RLADLGVRLPTLQD RR
Sbjct 1 LWAYWCGECIAELPAMAEYQQRVGPEVMVVTVHQDENETAALLRLADLGVRLPTLQDGRR 60
Query 181 RVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDA 226
+VAAALRVANVMPATV+LRPDGSVAQTLPRAF SA+EI AAVG+ A
Sbjct 61 KVAAALRVANVMPATVLLRPDGSVAQTLPRAFASAEEIAAAVGDKA 106
>gi|254773462|ref|ZP_05214978.1| hypothetical protein MaviaA2_02125 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=100
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/100 (80%), Positives = 85/100 (85%), Gaps = 0/100 (0%)
Query 128 PCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALR 187
PC ELP MAEYQRR G V V+TVHQ +NE AAL RLA+LGVRLPTLQD RRRVAAALR
Sbjct 1 PCAAELPAMAEYQRRAGAEVTVLTVHQDENETAALLRLAELGVRLPTLQDGRRRVAAALR 60
Query 188 VANVMPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
V NVMPATVVLRPDGSVAQTLPRAF +ADEI AA+GND G
Sbjct 61 VVNVMPATVVLRPDGSVAQTLPRAFSTADEIAAAIGNDRG 100
>gi|111021300|ref|YP_704272.1| thioredoxin [Rhodococcus jostii RHA1]
gi|110820830|gb|ABG96114.1| possible thioredoxin [Rhodococcus jostii RHA1]
Length=220
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/167 (50%), Positives = 107/167 (65%), Gaps = 5/167 (2%)
Query 65 PEALAWSRQRANLPPCPAAGN----GPGAAALRGVVVVCAGDGSAVDVARALAGRRVVIN 120
P+ALA R +A L CPAA PG+ L G+ + C GDGS VD+A AL G+ ++N
Sbjct 52 PDALAALRTQAGLASCPAATATSEPSPGSV-LSGITLECVGDGSQVDLAAALGGKPALLN 110
Query 121 LWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRR 180
LWA+WC PC ELP M ++ R G AV V+TVH NEA+ALSRL D V LP +QD
Sbjct 111 LWAYWCGPCAEELPYMQQFSDRAGDAVTVLTVHTDPNEASALSRLVDYSVTLPGVQDADG 170
Query 181 RVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
RV AA+ V+P +V++RPDG+VA+ LP+ F S DEI AV + G
Sbjct 171 RVRAAVGAPPVLPVSVLIRPDGTVAKVLPQPFRSVDEIADAVEQNLG 217
>gi|333917946|ref|YP_004491527.1| putative thiol-disulfide oxidoreductase [Amycolicicoccus subflavus
DQS3-9A1]
gi|333480167|gb|AEF38727.1| Putative thiol-disulfide oxidoreductase [Amycolicicoccus subflavus
DQS3-9A1]
Length=225
Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/182 (47%), Positives = 108/182 (60%), Gaps = 11/182 (6%)
Query 49 TISQRPAPREHRDGDTPEALAWSRQRANLPPCPAAGNGPGA--------AALRGVVVVCA 100
T +++P E RD DTPEALA R ANL PCP P A L G+ + C
Sbjct 39 TATEQP---ERRDQDTPEALAGPRLDANLMPCPEPVASPPARWPAGSALEILAGLQLGCL 95
Query 101 GDGSAVDVARALAGRRVVINLWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAA 160
DG+ VD++ LAG+ VIN+WA+WCAPC ELP + EY VG +V V+TVH+ NE
Sbjct 96 SDGTRVDLSSVLAGKPAVINVWAYWCAPCAEELPALQEYADSVGDSVTVLTVHRDPNERN 155
Query 161 ALSRLADLGVRLPTLQDDRRRVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIVA 220
AL +L + GV LP +QD VA L NV+P T+VLR DG++A+ L F SA EI
Sbjct 156 ALLKLTEYGVDLPGVQDGSGTVAGLLGAPNVLPVTIVLRADGTLARILAVPFTSASEIAD 215
Query 221 AV 222
AV
Sbjct 216 AV 217
>gi|226363644|ref|YP_002781426.1| thiol-disulfide oxidoreductase [Rhodococcus opacus B4]
gi|226242133|dbj|BAH52481.1| putative thiol-disulfide oxidoreductase [Rhodococcus opacus B4]
Length=218
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/134 (51%), Positives = 90/134 (68%), Gaps = 0/134 (0%)
Query 94 GVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVH 153
G+ + C GDGS VD+A AL G+ ++NLWA+WC PC ELP M ++ R G AV V+TVH
Sbjct 82 GITLECVGDGSQVDLAAALGGKPAMLNLWAYWCGPCAEELPYMQQFSDRAGDAVTVLTVH 141
Query 154 QGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVMPATVVLRPDGSVAQTLPRAFG 213
NE++ALSRL D V LP +QD RV AA+ V+P +V++RPDG+VA+ LP+ F
Sbjct 142 TDPNESSALSRLIDYSVTLPGVQDGDGRVRAAVGAPPVLPVSVLIRPDGTVAKVLPQPFR 201
Query 214 SADEIVAAVGNDAG 227
S DEI AV + G
Sbjct 202 SVDEIADAVEQNLG 215
>gi|312137992|ref|YP_004005328.1| thioredoxin [Rhodococcus equi 103S]
gi|311887331|emb|CBH46642.1| putative secreted thioredoxin [Rhodococcus equi 103S]
Length=222
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/134 (52%), Positives = 91/134 (68%), Gaps = 0/134 (0%)
Query 89 AAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTELPVMAEYQRRVGPAVL 148
+ L G+ + C GDGS VD+A ALAG+ V++NLWA+WC PC ELP + +Y R G AV
Sbjct 81 GSVLEGITLECVGDGSRVDLAAALAGKPVLLNLWAYWCGPCREELPYLQQYADRAGSAVT 140
Query 149 VVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVMPATVVLRPDGSVAQTL 208
V+TVH NEA AL+RLA+ V LP +QD RV AA+ V+P +V++RPDG+VA+ L
Sbjct 141 VLTVHTDPNEANALARLAEYDVHLPGVQDGSARVQAAVGSPAVLPVSVLIRPDGTVAKIL 200
Query 209 PRAFGSADEIVAAV 222
P+ F S DEI V
Sbjct 201 PQPFRSVDEIADVV 214
>gi|325675282|ref|ZP_08154967.1| thioredoxin [Rhodococcus equi ATCC 33707]
gi|325553988|gb|EGD23665.1| thioredoxin [Rhodococcus equi ATCC 33707]
Length=222
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/134 (52%), Positives = 91/134 (68%), Gaps = 0/134 (0%)
Query 89 AAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTELPVMAEYQRRVGPAVL 148
+ L G+ + C GDGS VD+A ALAG+ V++NLWA+WC PC ELP + +Y R G AV
Sbjct 81 GSVLEGITLECVGDGSRVDLAAALAGKPVLLNLWAYWCGPCREELPYLQQYADRAGSAVT 140
Query 149 VVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVMPATVVLRPDGSVAQTL 208
V+TVH NEA AL+RLA+ V LP +QD RV AA+ V+P +V++RPDG+VA+ L
Sbjct 141 VLTVHTDPNEANALARLAEYDVHLPGVQDGSARVQAAVGSPAVLPVSVLIRPDGTVAKIL 200
Query 209 PRAFGSADEIVAAV 222
P+ F S DEI V
Sbjct 201 PQPFRSVDEIADVV 214
>gi|226303972|ref|YP_002763930.1| thiol-disulfide oxidoreductase [Rhodococcus erythropolis PR4]
gi|226183087|dbj|BAH31191.1| putative thiol-disulfide oxidoreductase [Rhodococcus erythropolis
PR4]
Length=217
Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/154 (45%), Positives = 98/154 (64%), Gaps = 1/154 (0%)
Query 66 EALAWSRQRANLPPCPA-AGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAH 124
E+L R +A+L PCP G P +AL G+ + C DG VD+A A+ G+ ++NLWA+
Sbjct 52 ESLDQLRSQASLAPCPTPTGEAPAGSALAGITLDCVSDGRPVDLAAAVGGKPTLLNLWAY 111
Query 125 WCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAA 184
WCAPC ELP + E+ R ++ V+TVH N+ AL+RL D VRLP +QD +V
Sbjct 112 WCAPCAEELPYLQEFAERAEGSINVLTVHSDPNQENALTRLIDYSVRLPGVQDGDGKVRI 171
Query 185 ALRVANVMPATVVLRPDGSVAQTLPRAFGSADEI 218
A+ V+P +V++R DG+VA+ LP+ F SADEI
Sbjct 172 AVGAPPVLPVSVLVRADGTVAKVLPQPFRSADEI 205
>gi|229492163|ref|ZP_04385972.1| antioxidant, AhpC/TSA family [Rhodococcus erythropolis SK121]
gi|229320951|gb|EEN86763.1| antioxidant, AhpC/TSA family [Rhodococcus erythropolis SK121]
Length=217
Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/154 (45%), Positives = 97/154 (63%), Gaps = 1/154 (0%)
Query 66 EALAWSRQRANLPPCPA-AGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAH 124
E+L R +A L CP G P +AL G+ + C DG+ VD+A A+ G+ ++NLWA+
Sbjct 52 ESLDQLRSQAALASCPTPTGEAPAGSALAGITLDCVSDGAPVDLAAAVGGKPTLLNLWAY 111
Query 125 WCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAA 184
WCAPC ELP + E+ R ++ V+TVH N+ AL+RL D VRLP +QD +V
Sbjct 112 WCAPCAEELPYLQEFAERADGSINVLTVHSDPNQENALTRLIDYSVRLPGVQDGDGKVRI 171
Query 185 ALRVANVMPATVVLRPDGSVAQTLPRAFGSADEI 218
A+ V+P +V++R DG+VA+ LP+ F SADEI
Sbjct 172 AVGAPPVLPVSVLVRADGTVAKVLPQPFRSADEI 205
>gi|262200523|ref|YP_003271731.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal
allergen [Gordonia bronchialis DSM 43247]
gi|262083870|gb|ACY19838.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Gordonia bronchialis DSM 43247]
Length=206
Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/166 (44%), Positives = 101/166 (61%), Gaps = 4/166 (2%)
Query 66 EALAWSRQRANLPPCPAAGNGPGA-AALRGVVVVCAGDGSAVDVARALAGRRVVINLWAH 124
+ LA +R+ A + PCPA G PG A L G+ V C G+ +DV A AGR +VIN+WA
Sbjct 38 DELAAARRDAAINPCPATGGVPGPDAVLAGITVPCLATGAPIDVGAATAGRPLVINIWAT 97
Query 125 WCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAA---ALSRLADLGVRLPTLQDDRRR 181
WC PC ELP E+ +R G V V+ VH + ++ L LA+ G+ LP++ D +
Sbjct 98 WCLPCRKELPYFEEFAQRAGDRVTVLGVHAAEGASSPVLVLKFLAENGIHLPSVLDTKGA 157
Query 182 VAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
V+AAL V P+T+++RPDG+VA+ LP F S D+I AAV + G
Sbjct 158 VSAALGAPPVFPSTILVRPDGTVAKVLPILFHSPDQIAAAVAENLG 203
>gi|54022313|ref|YP_116555.1| hypothetical protein nfa3490 [Nocardia farcinica IFM 10152]
gi|54013821|dbj|BAD55191.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=209
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/152 (49%), Positives = 92/152 (61%), Gaps = 1/152 (0%)
Query 72 RQRANLPPCPAAGNGP-GAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCM 130
R A L PCP G GA L G+ C DG+ VD+A ALAG+ ++NLWA+WC PC
Sbjct 50 RADAALAPCPGPAPGAVGAGPLAGLTPTCLADGAPVDLAAALAGKPALLNLWAYWCGPCA 109
Query 131 TELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVAN 190
ELP + EY RVG V V+TVH EA ALSRL L V LP + D RV AA+
Sbjct 110 EELPHLREYVSRVGDRVTVLTVHSDPEEAKALSRLTGLDVHLPGVLDPDARVRAAVGAPA 169
Query 191 VMPATVVLRPDGSVAQTLPRAFGSADEIVAAV 222
V+P +V++RPDGSVA+ + R F D+I A V
Sbjct 170 VLPISVLVRPDGSVAEVVVRTFTGVDDIAATV 201
>gi|343926476|ref|ZP_08765981.1| putative thiol-disulfide oxidoreductase [Gordonia alkanivorans
NBRC 16433]
gi|343763714|dbj|GAA12907.1| putative thiol-disulfide oxidoreductase [Gordonia alkanivorans
NBRC 16433]
Length=246
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/215 (40%), Positives = 115/215 (54%), Gaps = 11/215 (5%)
Query 21 RWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHRDGDTP--EA-LAWSRQRANL 77
RWT+ + V+ AL+ A+ + + S T P+ R D P EA +A +R A L
Sbjct 32 RWTLVFVIVMIALIVAIWPRGD--APSPTTGSPPSVSGPRPFDAPVDEARVAQARADAEL 89
Query 78 PPCPAAG--NGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTELPV 135
CP G P + L G+V C G G+ D+ A AG+ +V+N+WA WC PC TELP
Sbjct 90 ADCPVTGLPENPDSV-LAGIVEPCLGTGAPYDLGAATAGKPLVVNVWAQWCGPCKTELPY 148
Query 136 MAEYQRRVGPAVLVVTVHQ---GQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVM 192
E+ R G V V+ +H G N L+ L ++GVRLP++ D RVAAA+ V
Sbjct 149 FEEFAARAGDRVTVLALHAKEGGTNPFFPLTLLTEIGVRLPSVLDPDGRVAAAITAPRVF 208
Query 193 PATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
P+TV LRPDG++A+ P F S EI AV G
Sbjct 209 PSTVFLRPDGTIAKVYPGVFDSPQEIADAVEEYLG 243
>gi|331700213|ref|YP_004336452.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Pseudonocardia dioxanivorans CB1190]
gi|326954902|gb|AEA28599.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Pseudonocardia dioxanivorans CB1190]
Length=217
Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/138 (47%), Positives = 84/138 (61%), Gaps = 1/138 (0%)
Query 72 RQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMT 131
+ RA LPPCPA P A L GV V C G G VD+ ALAGRR ++N+WA WCAPC
Sbjct 60 QARAALPPCPAPSGAPAAGPLAGVSVPCLGTGGTVDLGAALAGRRALLNVWASWCAPCRA 119
Query 132 ELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANV 191
ELP +AEY R G AV V+ + AL+ LADLG++LP++ D +AAAL +
Sbjct 120 ELPALAEYAARPG-AVPVIGIDVRDQPGPALTLLADLGIKLPSVADPDGTLAAALSLPPA 178
Query 192 MPATVVLRPDGSVAQTLP 209
+P + ++ DG+V LP
Sbjct 179 VPVSYLVDADGTVTPILP 196
>gi|296141597|ref|YP_003648840.1| redoxin [Tsukamurella paurometabola DSM 20162]
gi|296029731|gb|ADG80501.1| Redoxin domain protein [Tsukamurella paurometabola DSM 20162]
Length=225
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/151 (45%), Positives = 88/151 (59%), Gaps = 6/151 (3%)
Query 79 PCPAAG--NGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTELPVM 136
PCP G GP L G+ + C DG +D G V++N+WA WCAPC ELP +
Sbjct 76 PCPTGGVPRGP----LAGLRLDCLADGRTLDAGAFPDGLPVLVNVWAWWCAPCRVELPAL 131
Query 137 AEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVMPATV 196
AE RR + V+TVH N AAAL L +L + LPT++D + +VA L V PAT+
Sbjct 132 AEVARRGADKLTVLTVHADPNAAAALDLLTELKLTLPTVEDPQSKVATMLGAPRVYPATI 191
Query 197 VLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
+LR DGSVA+ R F S D++ AAV +D G
Sbjct 192 LLRADGSVAKVHARPFTSVDDVTAAVRDDLG 222
>gi|326383485|ref|ZP_08205172.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Gordonia neofelifaecis NRRL B-59395]
gi|326197891|gb|EGD55078.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Gordonia neofelifaecis NRRL B-59395]
Length=230
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/156 (40%), Positives = 87/156 (56%), Gaps = 10/156 (6%)
Query 79 PCPAAGNGPGAAA----LRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTELP 134
PCP +GPG A L GV V C G+ VD+ AG+ +VIN+WA WC PC ELP
Sbjct 71 PCP---DGPGPAVPDAVLAGVTVPCMATGAPVDLGVTTAGKPLVINMWAVWCLPCRRELP 127
Query 135 VMAEYQRRVGPAVLVVTVHQ---GQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANV 191
+ ++ +R G ++ V+ VH G L L ++GV LP + D VA A+ V
Sbjct 128 IFDDFSKRAGDSLNVLAVHAREGGDKPYFVLKFLEEVGVHLPVVTDPDGAVAKAIGAPRV 187
Query 192 MPATVVLRPDGSVAQTLPRAFGSADEIVAAVGNDAG 227
P+TV++R DG+VA+ LP+ F S E+ AV + G
Sbjct 188 FPSTVMIRADGTVAKVLPQVFESEAELAEAVRENLG 223
>gi|256374411|ref|YP_003098071.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Actinosynnema mirum DSM 43827]
gi|255918714|gb|ACU34225.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
allergen [Actinosynnema mirum DSM 43827]
Length=226
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/137 (44%), Positives = 80/137 (59%), Gaps = 3/137 (2%)
Query 88 GAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTELPVMAEYQRRVGPAV 147
G ALRG VC GDG VD A AL+GR V++N WA WCAPC EL V+ +Y +R G A+
Sbjct 92 GPEALRGATAVCLGDGERVDAATALSGR-VLVNFWASWCAPCREELRVLDDYSQRPG-AI 149
Query 148 LVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVMPATVVLRPDGSVAQ- 206
V+ V EA L L+ +GV LP+L DD + A +V +PA+ ++ DGS+
Sbjct 150 PVLGVQVKSGEADGLDLLSRIGVHLPSLVDDSEALLRAFKVPPTLPASFLVGADGSITPV 209
Query 207 TLPRAFGSADEIVAAVG 223
T P F S D++ VG
Sbjct 210 TDPLVFTSVDQVREVVG 226
>gi|237786549|ref|YP_002907254.1| hypothetical protein ckrop_2004 [Corynebacterium kroppenstedtii
DSM 44385]
gi|237759461|gb|ACR18711.1| putative secreted protein [Corynebacterium kroppenstedtii DSM
44385]
Length=247
Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/240 (33%), Positives = 112/240 (47%), Gaps = 37/240 (15%)
Query 19 KTRWTIAILAVVAALMAALV-------AQLHDYSASSTISQRPAPREHRDGDTPEALAW- 70
+ RWTI I+AV+ L+ V + +D + + IS PA + D+ E
Sbjct 4 QQRWTILIIAVLTGLVICAVPLMLRSTSSHNDAHSGAAISDNPAGQGSGSNDSSEGADSP 63
Query 71 -SRQRANLPPCPAAGNGPGAAALRG----------------------VVVVCAGDGS--- 104
S P CP G+ A + G V + C G+ +
Sbjct 64 ASNPTTGRPACPTEGSDTAATSAEGSGNSEDSGSSEGSDDANSPLGSVTLPCLGNSASEA 123
Query 105 -AVDVARALAGRRVVINLWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAAALS 163
A ++R LAG+ VINLWA WC PC ELP++ + + P VV VH +N A +
Sbjct 124 GAQPLSRNLAGKPTVINLWAFWCQPCKKELPIVDKVAQS-HPEWNVVGVHADKNGDAGVG 182
Query 164 RLADLGV-RLPTLQDDRRRVAAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIVAAV 222
L+DL V L + QD VA AL++ +V+P T VL P+G VA+ P+ F S E+ +AV
Sbjct 183 VLSDLHVDHLASFQDSGGDVARALKLPSVIPITAVLTPNGEVAKVYPQTFTSTSELESAV 242
>gi|145294425|ref|YP_001137246.1| hypothetical protein cgR_0380 [Corynebacterium glutamicum R]
gi|140844345|dbj|BAF53344.1| hypothetical protein [Corynebacterium glutamicum R]
Length=186
Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/207 (34%), Positives = 101/207 (49%), Gaps = 28/207 (13%)
Query 16 LTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHRDGDTPEALAWSRQRA 75
+T +W+I + + A++ AL+ QL ++ E G+T + +R
Sbjct 1 MTSSAKWSIVGVVAILAVIVALIPQLVGGESA----------EEAQGETSTSKITTR--- 47
Query 76 NLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTELPV 135
P C A+G GV + C G A V LA V+NLWA WC PC ELP+
Sbjct 48 --PDCVASG-------AAGVDLPCLG--GANGVGNELA---TVVNLWAWWCEPCRAELPI 93
Query 136 MAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVMPAT 195
E+ P + V+ VH QN A + L DLGV L + QDD A AL + V+P T
Sbjct 94 FDEF-ATTHPELNVIGVHADQNAANGAALLEDLGVNLASYQDDSNLFAGALGLPGVVPIT 152
Query 196 VVLRPDGSVAQTLPRAFGSADEIVAAV 222
+V+ PDG+V T P+ F + D++ AV
Sbjct 153 IVVSPDGNVVDTFPQPFETIDDLETAV 179
>gi|344045216|gb|EGV40889.1| hypothetical protein CgS9114_06002 [Corynebacterium glutamicum
S9114]
Length=186
Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/212 (34%), Positives = 100/212 (48%), Gaps = 38/212 (17%)
Query 16 LTGKTRWTI----AILAVVAALMAALVA-QLHDYSASSTISQRPAPREHRDGDTPEALAW 70
+T +W+I AILAV+ AL+ LV + + + T + + PR P+ +A
Sbjct 1 MTSSAKWSIVGVVAILAVIVALIPQLVGGESAEEAQGETSTSKITPR-------PDCVAS 53
Query 71 SRQRANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCM 130
+LP C NG V LA V+NLWA WC PC
Sbjct 54 GAAGVDLP-CLGGANG---------------------VGNELA---TVVNLWAWWCEPCR 88
Query 131 TELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVAN 190
ELP+ E+ P + V+ VH QN A + L DLGV L + QDD A AL +
Sbjct 89 AELPIFDEF-ATTHPELNVIGVHADQNAANGAALLEDLGVNLASYQDDSNLFAGALGLPG 147
Query 191 VMPATVVLRPDGSVAQTLPRAFGSADEIVAAV 222
V+P T+V+ PDG+V T P+ F + D++ AV
Sbjct 148 VVPITIVVSPDGNVVDTFPQPFETIDDLETAV 179
>gi|19551544|ref|NP_599546.1| thiol-disulfide isomerase [Corynebacterium glutamicum ATCC 13032]
gi|62389191|ref|YP_224593.1| thioredoxin-related protein [Corynebacterium glutamicum ATCC
13032]
gi|21323058|dbj|BAB97687.1| Thiol-disulfide isomerase and thioredoxins [Corynebacterium glutamicum
ATCC 13032]
gi|41324524|emb|CAF18864.1| THIOREDOXIN-RELATED PROTEIN, secreted [Corynebacterium glutamicum
ATCC 13032]
Length=186
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/207 (34%), Positives = 100/207 (49%), Gaps = 28/207 (13%)
Query 16 LTGKTRWTIAILAVVAALMAALVAQLHDYSASSTISQRPAPREHRDGDTPEALAWSRQRA 75
+T +W+I + + A++ AL+ QL ++ E G+T + +R
Sbjct 1 MTSSAKWSIVGVVAILAVIVALIPQLVGGESA----------EEAQGETSTSKITTR--- 47
Query 76 NLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTELPV 135
P C A+G GV + C G A V LA V+NLWA WC PC ELP+
Sbjct 48 --PDCVASG-------AAGVDLPCLG--GANGVGNELA---TVVNLWAWWCEPCRAELPI 93
Query 136 MAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVMPAT 195
E+ P + V+ VH QN A + L DLGV L + QDD A L + V+P T
Sbjct 94 FDEFATT-HPELNVIGVHADQNAANGAALLEDLGVNLASYQDDSNLFAGTLGLPGVVPIT 152
Query 196 VVLRPDGSVAQTLPRAFGSADEIVAAV 222
+V+ PDG+V T P+ F + D++ AV
Sbjct 153 IVVSPDGNVVDTFPQPFETIDDLETAV 179
>gi|291010077|ref|ZP_06568050.1| redoxin [Saccharopolyspora erythraea NRRL 2338]
Length=165
Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/130 (45%), Positives = 74/130 (57%), Gaps = 2/130 (1%)
Query 99 CAGDGSAVDVARALAGRRVVINLWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNE 158
C DG D+A + GR ++N+WA WC PC TELP + EY RR G AV VV V +E
Sbjct 34 CLADGRPADLAAMVGGRTTLVNVWATWCQPCRTELPALQEYSRRPG-AVPVVGVQVQSDE 92
Query 159 AAALSRLADLGVRLPTLQDDRRRVAAALRVANVMPATVVLRPDGSVAQTLPR-AFGSADE 217
L+ L +LGVR P + D R+ AAL V V+P + V+ G V + P AF SADE
Sbjct 93 DDGLALLRELGVRYPNVHDPDNRIRAALNVPAVLPMSYVVTASGEVRRVDPPVAFESADE 152
Query 218 IVAAVGNDAG 227
+ AV AG
Sbjct 153 VRTAVQRTAG 162
>gi|134096946|ref|YP_001102607.1| redoxin [Saccharopolyspora erythraea NRRL 2338]
gi|133909569|emb|CAL99681.1| redoxin [Saccharopolyspora erythraea NRRL 2338]
Length=212
Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/130 (45%), Positives = 74/130 (57%), Gaps = 2/130 (1%)
Query 99 CAGDGSAVDVARALAGRRVVINLWAHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNE 158
C DG D+A + GR ++N+WA WC PC TELP + EY RR G AV VV V +E
Sbjct 81 CLADGRPADLAAMVGGRTTLVNVWATWCQPCRTELPALQEYSRRPG-AVPVVGVQVQSDE 139
Query 159 AAALSRLADLGVRLPTLQDDRRRVAAALRVANVMPATVVLRPDGSVAQTL-PRAFGSADE 217
L+ L +LGVR P + D R+ AAL V V+P + V+ G V + P AF SADE
Sbjct 140 DDGLALLRELGVRYPNVHDPDNRIRAALNVPAVLPMSYVVTASGEVRRVDPPVAFESADE 199
Query 218 IVAAVGNDAG 227
+ AV AG
Sbjct 200 VRTAVQRTAG 209
>gi|25026846|ref|NP_736900.1| hypothetical protein CE0290 [Corynebacterium efficiens YS-314]
gi|259506092|ref|ZP_05748994.1| thiol-disulfide isomerase [Corynebacterium efficiens YS-314]
gi|23492126|dbj|BAC17100.1| hypothetical protein [Corynebacterium efficiens YS-314]
gi|259166308|gb|EEW50862.1| thiol-disulfide isomerase [Corynebacterium efficiens YS-314]
Length=192
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/131 (42%), Positives = 68/131 (52%), Gaps = 8/131 (6%)
Query 99 CAGDGSAVDVARALAGRR-------VVINLWAHWCAPCMTELPVMAEYQRRVGPAVLVVT 151
C DG+A L G + V+N+WA WC PC ELPV E+ P + VV
Sbjct 59 CQDDGAAGVQLPCLGGEQGQGNDLPTVVNVWAWWCEPCRDELPVFDEFAAS-HPELNVVG 117
Query 152 VHQGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVMPATVVLRPDGSVAQTLPRA 211
VH N A + L DLGV LP+ QDD A L + V+P TVV+ PDG + T PR
Sbjct 118 VHADTNAANGAAMLGDLGVGLPSYQDDSNLFAGTLGLPAVVPITVVVDPDGELVGTFPRT 177
Query 212 FGSADEIVAAV 222
F S ++ AAV
Sbjct 178 FDSVQDLEAAV 188
>gi|300790633|ref|YP_003770924.1| redoxin [Amycolatopsis mediterranei U32]
gi|299800147|gb|ADJ50522.1| redoxin [Amycolatopsis mediterranei U32]
gi|340532322|gb|AEK47527.1| redoxin [Amycolatopsis mediterranei S699]
Length=199
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/135 (43%), Positives = 79/135 (59%), Gaps = 5/135 (3%)
Query 92 LRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTELPVMAEYQRRVGPAVLVVT 151
L GV C GDG++VDV +ALAG ++N+WA WC PC TELPV+ EY ++ G AV V+
Sbjct 62 LEGVTADCLGDGASVDVGKALAGAPALVNVWASWCEPCRTELPVLQEYAKQPG-AVRVLG 120
Query 152 VHQGQNEAAALSRLADLGVRLPTLQDDRRR---VAAALRVANVMPATVVLRPDGSVAQTL 208
V L LA LGV LP++ D V AL+V + +PA+ ++ G V
Sbjct 121 VQVQSPAKDGLDLLAKLGVHLPSVFDGDGSSGPVRTALKVPSALPASYLVTAGGEVRFIA 180
Query 209 -PRAFGSADEIVAAV 222
PR+F + D++ AAV
Sbjct 181 NPRSFVNTDQVRAAV 195
>gi|340795427|ref|YP_004760890.1| hypothetical protein CVAR_2472 [Corynebacterium variabile DSM
44702]
gi|340535337|gb|AEK37817.1| hypothetical protein CVAR_2472 [Corynebacterium variabile DSM
44702]
Length=228
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/149 (41%), Positives = 80/149 (54%), Gaps = 7/149 (4%)
Query 80 CPAA-GNGPGAAALRGVVVVCAGDGSA---VDVARALAGRRVVINLWAHWCAPCMTELPV 135
CP G+ P + L VVV C DG +A+ALAG+ ++N+WA WC PC ELPV
Sbjct 79 CPTGDGSDPQDSELSDVVVPCLTDGGGAAETSMAQALAGKPTLVNVWAWWCQPCRAELPV 138
Query 136 MAEYQRRVGPAVLVVTVH-QGQNEAAALSRLADLGVRLPTLQDDRRRVAAALRVANVMPA 194
+ E + P +V VH GQ +A A LADL RLP QD AAA + +V+P
Sbjct 139 LTEAAAK-HPEWNIVGVHANGQGQAGA-DLLADLDARLPAFQDSDGAFAAAAELPSVIPV 196
Query 195 TVVLRPDGSVAQTLPRAFGSADEIVAAVG 223
+V+ R DGS A P S +E+ +G
Sbjct 197 SVIYRADGSRASFHPGEITSVEELEELMG 225
>gi|302530868|ref|ZP_07283210.1| redoxin [Streptomyces sp. AA4]
gi|302439763|gb|EFL11579.1| redoxin [Streptomyces sp. AA4]
Length=200
Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/137 (41%), Positives = 76/137 (56%), Gaps = 5/137 (3%)
Query 92 LRGVVVVCAGDGSAVDVARALAGRRVVINLWAHWCAPCMTELPVMAEYQRRVGPAVLVVT 151
L G+ C GDGS VDV + L G V++N+WA WC PC TELPV+ Y G AV VV
Sbjct 63 LSGIEADCLGDGSRVDVGKVLGGGPVLVNVWASWCQPCRTELPVLQRYAAEPG-AVRVVG 121
Query 152 VHQGQNEAAALSRLADLGVRLPTLQDDRRR---VAAALRVANVMPATVVLRPDGSVAQTL 208
V + L LGV LP+L D + + AAL+V + +PA+ ++ DG V
Sbjct 122 VQVASPASDGLGLFQRLGVHLPSLYDGDGQTGPIRAALKVPSSLPASYLVTADGQVRFIA 181
Query 209 -PRAFGSADEIVAAVGN 224
PR F + D++ AAV +
Sbjct 182 NPRLFDNTDQVRAAVKD 198
>gi|38232926|ref|NP_938693.1| hypothetical protein DIP0305 [Corynebacterium diphtheriae NCTC
13129]
gi|38199184|emb|CAE48809.1| Putative secreted protein [Corynebacterium diphtheriae]
Length=186
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/160 (36%), Positives = 81/160 (51%), Gaps = 12/160 (7%)
Query 64 TPEALAWSRQR-ANLPPCPAAGNGPGAAALRGVVVVCAGDGSAVDVARALAGRRVVINLW 122
TPE L Q A+ P C + + GV + C G + + + V+N+W
Sbjct 31 TPENLQEETQNVASRPDCEVS-------TVAGVQLDCLGGNAHMSDGNP---KITVVNVW 80
Query 123 AHWCAPCMTELPVMAEYQRRVGPAVLVVTVHQGQNEAAALSRLADLGVRLPTLQDDRRRV 182
A WC PC ELP+ +R P + V+ VH N A + L DLGV LP+LQD+
Sbjct 81 AWWCEPCRAELPLFDTLAQR-HPELRVIGVHADTNAANGAALLNDLGVSLPSLQDNHNAF 139
Query 183 AAALRVANVMPATVVLRPDGSVAQTLPRAFGSADEIVAAV 222
A L + NV+P TV++ DGS +PRAF + +E+ AV
Sbjct 140 AGTLGLPNVVPITVIMNADGSKEAVMPRAFSTYEELETAV 179
Lambda K H
0.319 0.130 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 291076174136
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40