BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3688c
Length=154
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610824|ref|NP_218205.1| hypothetical protein Rv3688c [Mycob... 301 2e-80
gi|340628661|ref|YP_004747113.1| hypothetical protein MCAN_37091... 300 5e-80
gi|240172915|ref|ZP_04751574.1| hypothetical protein MkanA1_2661... 275 2e-72
gi|308406218|ref|ZP_07495597.2| hypothetical protein TMLG_00176 ... 272 1e-71
gi|183985167|ref|YP_001853458.1| hypothetical protein MMAR_5198 ... 267 4e-70
gi|118472316|ref|YP_890433.1| GatB/Yqey domain-containing protei... 263 7e-69
gi|254820809|ref|ZP_05225810.1| GatB/Yqey domain-containing prot... 248 2e-64
gi|41406461|ref|NP_959297.1| hypothetical protein MAP0363 [Mycob... 248 2e-64
gi|254773421|ref|ZP_05214937.1| GatB/Yqey domain-containing prot... 246 1e-63
gi|342861949|ref|ZP_08718593.1| GatB/Yqey domain-containing prot... 243 8e-63
gi|118619431|ref|YP_907763.1| hypothetical protein MUL_4271 [Myc... 243 1e-62
gi|108801819|ref|YP_642016.1| hypothetical protein Mmcs_4856 [My... 243 1e-62
gi|296166772|ref|ZP_06849194.1| GatB/Yqey domain protein [Mycoba... 229 1e-58
gi|226303951|ref|YP_002763909.1| hypothetical protein RER_04620 ... 223 1e-56
gi|54022302|ref|YP_116544.1| hypothetical protein nfa3380 [Nocar... 216 8e-55
gi|312137970|ref|YP_004005306.1| hypothetical protein REQ_04940 ... 214 2e-54
gi|111021290|ref|YP_704262.1| hypothetical protein RHA1_ro04314 ... 212 2e-53
gi|333992607|ref|YP_004525221.1| hypothetical protein JDM601_396... 208 2e-52
gi|333920596|ref|YP_004494177.1| GatB/YqeY [Amycolicicoccus subf... 162 2e-38
gi|134096926|ref|YP_001102587.1| GatB/YqeY [Saccharopolyspora er... 155 2e-36
gi|256374389|ref|YP_003098049.1| GatB/YqeY domain-containing pro... 151 3e-35
gi|25026827|ref|NP_736881.1| hypothetical protein CE0271 [Coryne... 150 8e-35
gi|296141627|ref|YP_003648870.1| hypothetical protein Tpau_3960 ... 148 2e-34
gi|38232918|ref|NP_938685.1| hypothetical protein DIP0297 [Coryn... 145 1e-33
gi|227502457|ref|ZP_03932506.1| possible glutaminyl-tRNA synthas... 143 8e-33
gi|306835028|ref|ZP_07468074.1| GatB/Yqey domain protein [Coryne... 143 8e-33
gi|300779999|ref|ZP_07089855.1| GatB/YqeY domain protein [Coryne... 142 1e-32
gi|255324174|ref|ZP_05365296.1| GatB/Yqey domain protein [Coryne... 142 2e-32
gi|296128397|ref|YP_003635647.1| hypothetical protein Cfla_0535 ... 139 1e-31
gi|72160512|ref|YP_288169.1| hypothetical protein Tfu_0108 [Ther... 139 2e-31
gi|331694278|ref|YP_004330517.1| hypothetical protein Psed_0392 ... 138 2e-31
gi|256398105|ref|YP_003119669.1| hypothetical protein Caci_9015 ... 137 5e-31
gi|227505986|ref|ZP_03936035.1| possible glutaminyl-tRNA synthas... 136 1e-30
gi|300857616|ref|YP_003782599.1| hypothetical protein cpfrc_0019... 136 1e-30
gi|308275592|gb|ADO25491.1| atB/YqeY domain protein [Corynebacte... 135 1e-30
gi|225022060|ref|ZP_03711252.1| hypothetical protein CORMATOL_02... 135 1e-30
gi|227832030|ref|YP_002833737.1| hypothetical protein cauri_0200... 135 2e-30
gi|19551528|ref|NP_599530.1| hypothetical protein NCgl0273 [Cory... 134 4e-30
gi|344045200|gb|EGV40873.1| hypothetical protein CgS9114_05922 [... 133 1e-29
gi|254391715|ref|ZP_05006912.1| conserved hypothetical protein [... 132 2e-29
gi|294813405|ref|ZP_06772048.1| YqeY domain-containing protein [... 132 2e-29
gi|271962032|ref|YP_003336228.1| GatB/YqeY domain-containing pro... 132 2e-29
gi|213966303|ref|ZP_03394486.1| GatB/Yqey domain protein [Coryne... 131 3e-29
gi|297564219|ref|YP_003683192.1| hypothetical protein Ndas_5306 ... 130 5e-29
gi|297193060|ref|ZP_06910458.1| conserved hypothetical protein [... 129 1e-28
gi|311743391|ref|ZP_07717198.1| GatB/Yqey domain protein [Aeromi... 129 2e-28
gi|312194242|ref|YP_004014303.1| hypothetical protein FraEuI1c_0... 128 2e-28
gi|296268187|ref|YP_003650819.1| GatB/YqeY domain-containing pro... 128 3e-28
gi|297201313|ref|ZP_06918710.1| GatB/Yqey domain-containing prot... 127 4e-28
gi|337766884|emb|CCB75595.1| conserved protein of unknown functi... 127 5e-28
>gi|15610824|ref|NP_218205.1| hypothetical protein Rv3688c [Mycobacterium tuberculosis H37Rv]
gi|15843306|ref|NP_338343.1| hypothetical protein MT3790 [Mycobacterium tuberculosis CDC1551]
gi|31794859|ref|NP_857352.1| hypothetical protein Mb3713c [Mycobacterium bovis AF2122/97]
74 more sequence titles
Length=154
Score = 301 bits (771), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/154 (100%), Positives = 154/154 (100%), Gaps = 0/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES
Sbjct 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR
Sbjct 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL
Sbjct 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
>gi|340628661|ref|YP_004747113.1| hypothetical protein MCAN_37091 [Mycobacterium canettii CIPT
140010059]
gi|340006851|emb|CCC46040.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=154
Score = 300 bits (768), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 153/154 (99%), Positives = 154/154 (100%), Gaps = 0/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES
Sbjct 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAE+LGHR
Sbjct 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEQLGHR 120
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL
Sbjct 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
>gi|240172915|ref|ZP_04751574.1| hypothetical protein MkanA1_26617 [Mycobacterium kansasii ATCC
12478]
Length=154
Score = 275 bits (702), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/154 (90%), Positives = 148/154 (97%), Gaps = 0/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
MAELKS+LR+DLT+AMKTQDKLRTAT+RM+LAAIQTEEVSGKQA+ELSDDEV+KVLARES
Sbjct 1 MAELKSRLRADLTEAMKTQDKLRTATLRMVLAAIQTEEVSGKQAKELSDDEVLKVLARES 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
RKRGEAAEIYTQNGRGELAA EHAEARIIDEYLPTPLTE ELADVADTAIA+VAE+LGHR
Sbjct 61 RKRGEAAEIYTQNGRGELAANEHAEARIIDEYLPTPLTEAELADVADTAIAQVAEQLGHR 120
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
P MKQMG+VMK AT IA GKADGARLSAAVKERL
Sbjct 121 PGMKQMGMVMKFATEIAEGKADGARLSAAVKERL 154
>gi|308406218|ref|ZP_07495597.2| hypothetical protein TMLG_00176 [Mycobacterium tuberculosis SUMu012]
gi|308364080|gb|EFP52931.1| hypothetical protein TMLG_00176 [Mycobacterium tuberculosis SUMu012]
gi|339296497|gb|AEJ48608.1| hypothetical protein CCDC5079_3419 [Mycobacterium tuberculosis
CCDC5079]
gi|339300096|gb|AEJ52206.1| hypothetical protein CCDC5180_3369 [Mycobacterium tuberculosis
CCDC5180]
Length=139
Score = 272 bits (696), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/139 (100%), Positives = 139/139 (100%), Gaps = 0/139 (0%)
Query 16 MKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARESRKRGEAAEIYTQNGR 75
MKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARESRKRGEAAEIYTQNGR
Sbjct 1 MKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARESRKRGEAAEIYTQNGR 60
Query 76 GELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHRPSMKQMGLVMKAATV 135
GELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHRPSMKQMGLVMKAATV
Sbjct 61 GELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHRPSMKQMGLVMKAATV 120
Query 136 IAAGKADGARLSAAVKERL 154
IAAGKADGARLSAAVKERL
Sbjct 121 IAAGKADGARLSAAVKERL 139
>gi|183985167|ref|YP_001853458.1| hypothetical protein MMAR_5198 [Mycobacterium marinum M]
gi|183178493|gb|ACC43603.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=154
Score = 267 bits (682), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 133/154 (87%), Positives = 145/154 (95%), Gaps = 0/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
MAELKS+LRSDLT+AMK+QDKLRTAT+RM+LAAIQTEEVSGKQA+EL+DDEV+KVLARES
Sbjct 1 MAELKSRLRSDLTKAMKSQDKLRTATLRMVLAAIQTEEVSGKQAKELTDDEVLKVLARES 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
RKRGEAAEIYTQNGRGE+AA EHAEARIIDEYLPTPLTE ELADV DTAIA+VAE+LG R
Sbjct 61 RKRGEAAEIYTQNGRGEMAANEHAEARIIDEYLPTPLTEAELADVVDTAIAQVAEQLGQR 120
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
P MKQMG+VMK AT IA GKADGARLS AVKERL
Sbjct 121 PHMKQMGMVMKVATEIAEGKADGARLSTAVKERL 154
>gi|118472316|ref|YP_890433.1| GatB/Yqey domain-containing protein [Mycobacterium smegmatis
str. MC2 155]
gi|118173603|gb|ABK74499.1| GatB/Yqey domain protein [Mycobacterium smegmatis str. MC2 155]
Length=154
Score = 263 bits (672), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 132/154 (86%), Positives = 146/154 (95%), Gaps = 0/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
MAELK +LR+DLT AMK+QDKLRTAT+RMLLAAIQ EEVSGKQARELSD++VI VLARES
Sbjct 1 MAELKDRLRADLTAAMKSQDKLRTATLRMLLAAIQKEEVSGKQARELSDEDVIAVLARES 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
R+RGEAAEIYTQNGRG+LAATEHAEAR+IDEYLPTPLTE ELADVADTAIA+VAE++G R
Sbjct 61 RRRGEAAEIYTQNGRGDLAATEHAEARVIDEYLPTPLTEAELADVADTAIAQVAEQIGER 120
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
PSM+QMG VMKAATVIAAGKADGARLS AV+ERL
Sbjct 121 PSMRQMGQVMKAATVIAAGKADGARLSQAVRERL 154
>gi|254820809|ref|ZP_05225810.1| GatB/Yqey domain-containing protein [Mycobacterium intracellulare
ATCC 13950]
Length=154
Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/154 (88%), Positives = 147/154 (96%), Gaps = 0/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
MAELKS+LR+DLT AMK QDKLRTAT+RMLLAAIQTEEVSGKQA++L+D+EVIKVLA+ES
Sbjct 1 MAELKSRLRADLTAAMKAQDKLRTATLRMLLAAIQTEEVSGKQAKDLTDEEVIKVLAKES 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
RKRGE+AEIYTQNGRG+LAA EHAEARIIDEYLPTPLTE E+ADVADTAIA+VAEE+G R
Sbjct 61 RKRGESAEIYTQNGRGDLAANEHAEARIIDEYLPTPLTEAEVADVADTAIAQVAEEIGER 120
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
P MKQMGLVMKAAT IAAGKADGARLSAAVKERL
Sbjct 121 PGMKQMGLVMKAATAIAAGKADGARLSAAVKERL 154
>gi|41406461|ref|NP_959297.1| hypothetical protein MAP0363 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118465492|ref|YP_879701.1| GatB/Yqey domain-containing protein [Mycobacterium avium 104]
gi|41394810|gb|AAS02680.1| hypothetical protein MAP_0363 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118166779|gb|ABK67676.1| GatB/Yqey domain protein [Mycobacterium avium 104]
gi|336460863|gb|EGO39748.1| hypothetical protein MAPs_36860 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=154
Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/154 (87%), Positives = 146/154 (95%), Gaps = 0/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
MAELKS+LR+DLT AMK QDKLRTAT+RMLLAAIQTEEVSGKQA++L+DDEVIKVLA+ES
Sbjct 1 MAELKSRLRADLTAAMKAQDKLRTATLRMLLAAIQTEEVSGKQAKDLTDDEVIKVLAKES 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
RKR E+AEIYTQNGRG+LAA EHAEARIIDEYLPTPLTE E+ADV DTAIA+VAEE+G R
Sbjct 61 RKRAESAEIYTQNGRGDLAANEHAEARIIDEYLPTPLTEAEVADVVDTAIAQVAEEIGER 120
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
PSMKQMG+VMKAAT IAAGKADGARLSAAVKERL
Sbjct 121 PSMKQMGMVMKAATAIAAGKADGARLSAAVKERL 154
>gi|254773421|ref|ZP_05214937.1| GatB/Yqey domain-containing protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length=154
Score = 246 bits (627), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/154 (86%), Positives = 145/154 (95%), Gaps = 0/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
MAELKS+LR+DLT AMK QDKLRTAT+RMLLAAIQTEEVSGKQA+EL+D+E IKVLA+ES
Sbjct 1 MAELKSRLRADLTAAMKAQDKLRTATLRMLLAAIQTEEVSGKQAKELTDEETIKVLAKES 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
RKR E+AEIYTQNGRG+LAA EHAEARIIDEYLPTPLTE E+ADV DTAIA+VAEE+G R
Sbjct 61 RKRAESAEIYTQNGRGDLAANEHAEARIIDEYLPTPLTEAEVADVVDTAIAQVAEEIGER 120
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
PSMKQMG+VMKAAT IAAGKADGARLSAAVKERL
Sbjct 121 PSMKQMGMVMKAATAIAAGKADGARLSAAVKERL 154
>gi|342861949|ref|ZP_08718593.1| GatB/Yqey domain-containing protein [Mycobacterium colombiense
CECT 3035]
gi|342130489|gb|EGT83798.1| GatB/Yqey domain-containing protein [Mycobacterium colombiense
CECT 3035]
Length=154
Score = 243 bits (619), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 130/154 (85%), Positives = 145/154 (95%), Gaps = 0/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
MAELKS++R+DLT AMK QDKLRTAT+RMLLAAIQTEEVSGK+AR+L+D+EV+KVLA+ES
Sbjct 1 MAELKSRIRTDLTAAMKAQDKLRTATLRMLLAAIQTEEVSGKEARDLTDEEVLKVLAKES 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
RKR E+AEIYTQNGRGELAA EHAE RIIDEYLPTPLTE E+ADVADTAIA+VAEE+G R
Sbjct 61 RKRSESAEIYTQNGRGELAANEHAEGRIIDEYLPTPLTEAEVADVADTAIAQVAEEIGER 120
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
P MKQMG+VMKAAT IAAGKADGARLSAAVKERL
Sbjct 121 PGMKQMGMVMKAATAIAAGKADGARLSAAVKERL 154
>gi|118619431|ref|YP_907763.1| hypothetical protein MUL_4271 [Mycobacterium ulcerans Agy99]
gi|118571541|gb|ABL06292.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=139
Score = 243 bits (619), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/139 (87%), Positives = 130/139 (94%), Gaps = 0/139 (0%)
Query 16 MKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARESRKRGEAAEIYTQNGR 75
MK+QDKLRTAT+RM+LAAIQTEEVSGKQA+EL+DDEV+KVLARESRKRGEAAEIYTQNGR
Sbjct 1 MKSQDKLRTATLRMVLAAIQTEEVSGKQAKELTDDEVLKVLARESRKRGEAAEIYTQNGR 60
Query 76 GELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHRPSMKQMGLVMKAATV 135
GE+AA EHAEARIIDEYLPTPLTE ELADV DTAIA+VAE+LG RP MKQMG+VMK AT
Sbjct 61 GEMAANEHAEARIIDEYLPTPLTEAELADVVDTAIAQVAEQLGQRPHMKQMGMVMKVATE 120
Query 136 IAAGKADGARLSAAVKERL 154
IA GKADGARLS AVKERL
Sbjct 121 IAEGKADGARLSTAVKERL 139
>gi|108801819|ref|YP_642016.1| hypothetical protein Mmcs_4856 [Mycobacterium sp. MCS]
gi|119870972|ref|YP_940924.1| GatB/Yqey domain-containing protein [Mycobacterium sp. KMS]
gi|126437788|ref|YP_001073479.1| GatB/Yqey domain-containing protein [Mycobacterium sp. JLS]
gi|108772238|gb|ABG10960.1| GatB/Yqey [Mycobacterium sp. MCS]
gi|119697061|gb|ABL94134.1| GatB/Yqey domain protein [Mycobacterium sp. KMS]
gi|126237588|gb|ABO00989.1| GatB/Yqey domain protein [Mycobacterium sp. JLS]
Length=154
Score = 243 bits (619), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/154 (84%), Positives = 146/154 (95%), Gaps = 0/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
MAELK++LR+DLT AMK+QDKLRTAT+RMLLAAIQTEEVSGK+AREL+DD+V+KVLARES
Sbjct 1 MAELKARLRADLTTAMKSQDKLRTATLRMLLAAIQTEEVSGKEARELTDDDVVKVLARES 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
RKRGEAAE+YTQNGRGELAA EHAEAR+I+EYLPTPLTE ELADV DTA+A+VAE+LG R
Sbjct 61 RKRGEAAEVYTQNGRGELAANEHAEARVIEEYLPTPLTEAELADVVDTAMAQVAEQLGER 120
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
P+MKQMG VMKAA+ IAAGKADG+RLSAAVK RL
Sbjct 121 PTMKQMGQVMKAASAIAAGKADGSRLSAAVKARL 154
>gi|296166772|ref|ZP_06849194.1| GatB/Yqey domain protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897869|gb|EFG77453.1| GatB/Yqey domain protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=154
Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/154 (89%), Positives = 147/154 (96%), Gaps = 0/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
MAELKS+LR+DLT AMK++DKLRTAT+R+LLAAIQTEEVSGKQA+ELSDDEVIKVLARES
Sbjct 1 MAELKSRLRADLTDAMKSKDKLRTATLRLLLAAIQTEEVSGKQAKELSDDEVIKVLARES 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
RKR E+AEIYTQNGRGELAA EHAEARIIDEYLPTPLTE ELADVADTAIA+VAEE+G R
Sbjct 61 RKRAESAEIYTQNGRGELAANEHAEARIIDEYLPTPLTEAELADVADTAIAQVAEEIGER 120
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
P MKQMGLVMKAAT IAAGKADGARLSAAVKERL
Sbjct 121 PGMKQMGLVMKAATAIAAGKADGARLSAAVKERL 154
>gi|226303951|ref|YP_002763909.1| hypothetical protein RER_04620 [Rhodococcus erythropolis PR4]
gi|229492154|ref|ZP_04385963.1| GatB/Yqey domain protein [Rhodococcus erythropolis SK121]
gi|226183066|dbj|BAH31170.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
gi|229320942|gb|EEN86754.1| GatB/Yqey domain protein [Rhodococcus erythropolis SK121]
Length=158
Score = 223 bits (567), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/151 (72%), Positives = 134/151 (89%), Gaps = 0/151 (0%)
Query 4 LKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARESRKR 63
LK+ LR+D+ +MK +D LRTAT+RML+AAIQTEEV+GK+AR L+D+E+IKVLA+ES+KR
Sbjct 8 LKATLRTDMVASMKAKDPLRTATLRMLMAAIQTEEVAGKEARVLTDEEIIKVLAKESKKR 67
Query 64 GEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHRPSM 123
GE+AEIYT+NGRGELAA E AEA+IIDEYLPTPLT+ EL DV DTA+A+V+EELG RP M
Sbjct 68 GESAEIYTENGRGELAAKERAEAQIIDEYLPTPLTDAELVDVVDTALAQVSEELGERPGM 127
Query 124 KQMGLVMKAATVIAAGKADGARLSAAVKERL 154
+QMG V+KAA+ +A GKADGAR+SAAVK RL
Sbjct 128 RQMGQVIKAASALAKGKADGARISAAVKSRL 158
>gi|54022302|ref|YP_116544.1| hypothetical protein nfa3380 [Nocardia farcinica IFM 10152]
gi|54013810|dbj|BAD55180.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=180
Score = 216 bits (550), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 110/154 (72%), Positives = 131/154 (86%), Gaps = 0/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M+ELK +LR+D+T AMK +D LR AT+RMLLAAIQ EV+G QARELSD EVI VL +E+
Sbjct 27 MSELKERLRADMTAAMKAKDTLRLATLRMLLAAIQNAEVAGAQARELSDAEVIAVLQKEA 86
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR E+AE+YTQ GRGELAA EHAEARIIDEYLPT L+E E+AD+ADTAIA+VAE+LG R
Sbjct 87 KKRNESAEVYTQAGRGELAANEHAEARIIDEYLPTQLSEAEVADLADTAIAQVAEQLGER 146
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
P M+QMG VMK AT +A GKADG+R+SAAVK RL
Sbjct 147 PGMRQMGQVMKIATQLAQGKADGSRISAAVKARL 180
>gi|312137970|ref|YP_004005306.1| hypothetical protein REQ_04940 [Rhodococcus equi 103S]
gi|325673231|ref|ZP_08152923.1| YqeY family protein [Rhodococcus equi ATCC 33707]
gi|311887309|emb|CBH46620.1| conserved hypothetical protein [Rhodococcus equi 103S]
gi|325555821|gb|EGD25491.1| YqeY family protein [Rhodococcus equi ATCC 33707]
Length=158
Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/151 (75%), Positives = 137/151 (91%), Gaps = 0/151 (0%)
Query 4 LKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARESRKR 63
LKS LR+DLT AMK +D+LR +T+RM++AAIQTEE SGK+AREL+DDEVIKVLA+ES+KR
Sbjct 8 LKSTLRADLTAAMKAKDQLRLSTLRMIMAAIQTEETSGKEARELTDDEVIKVLAKESKKR 67
Query 64 GEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHRPSM 123
GEAAE+YT+ GRGELAA E AEA++IDEYLPTPLT+ ELADVADTAIA++AEE+G RP M
Sbjct 68 GEAAEVYTEAGRGELAANERAEAQVIDEYLPTPLTDAELADVADTAIAQIAEEIGERPGM 127
Query 124 KQMGLVMKAATVIAAGKADGARLSAAVKERL 154
+QMG VMKAAT +AAGKADG+R+S AVK+RL
Sbjct 128 RQMGQVMKAATALAAGKADGSRISKAVKDRL 158
>gi|111021290|ref|YP_704262.1| hypothetical protein RHA1_ro04314 [Rhodococcus jostii RHA1]
gi|226363633|ref|YP_002781415.1| hypothetical protein ROP_42230 [Rhodococcus opacus B4]
gi|110820820|gb|ABG96104.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
gi|226242122|dbj|BAH52470.1| hypothetical protein [Rhodococcus opacus B4]
Length=155
Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/151 (77%), Positives = 135/151 (90%), Gaps = 0/151 (0%)
Query 4 LKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARESRKR 63
LK++LRSD+T AMK +D LRTATIRML+AA+QTEEVSGK+AREL+DDEV+KVLA+ES+KR
Sbjct 5 LKARLRSDMTAAMKAKDSLRTATIRMLMAAVQTEEVSGKEARELTDDEVLKVLAKESKKR 64
Query 64 GEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHRPSM 123
GE+AEIYT+NGRGELAA E AEA+IIDEYLPTPLT+ EL DV DTAIA+VAEE+G RP M
Sbjct 65 GESAEIYTENGRGELAAQERAEAQIIDEYLPTPLTDAELVDVVDTAIAQVAEEIGERPGM 124
Query 124 KQMGLVMKAATVIAAGKADGARLSAAVKERL 154
+QMG VMKAA +A GKADG+RLS AVK RL
Sbjct 125 RQMGQVMKAAGALAGGKADGSRLSHAVKSRL 155
>gi|333992607|ref|YP_004525221.1| hypothetical protein JDM601_3967 [Mycobacterium sp. JDM601]
gi|333488575|gb|AEF37967.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=154
Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/154 (81%), Positives = 139/154 (91%), Gaps = 0/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
MAELKS+LR+DLT+AMK QDKLRTAT+RMLLAAIQ+EEVSGKQAREL+DD+V+KVL RE+
Sbjct 1 MAELKSRLRADLTEAMKAQDKLRTATLRMLLAAIQSEEVSGKQARELTDDDVLKVLTREA 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
RKR E+A IYT+NGRGELAA EHAEARII EYLP PL E ELADV DTA+A+VAEE+G R
Sbjct 61 RKRAESAAIYTENGRGELAAEEHAEARIIAEYLPEPLNEAELADVVDTALAQVAEEIGER 120
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
P K MGLVMKAAT IAAGKADG+RLSAAVKERL
Sbjct 121 PHSKHMGLVMKAATAIAAGKADGSRLSAAVKERL 154
>gi|333920596|ref|YP_004494177.1| GatB/YqeY [Amycolicicoccus subflavus DQS3-9A1]
gi|333482817|gb|AEF41377.1| GatB/YqeY [Amycolicicoccus subflavus DQS3-9A1]
Length=155
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/154 (55%), Positives = 116/154 (76%), Gaps = 0/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
MAELK++LR+DLT AMK +D TAT+RML+AAI+TEEVSG +A+EL+D ++IKVL +E+
Sbjct 1 MAELKAKLRADLTAAMKAKDSATTATLRMLIAAIRTEEVSGTEAKELTDADIIKVLTKEA 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR E+A +++ GR ELA+ E AE II YLP L++ EL V A+A V +E G R
Sbjct 61 KKRAESATVFSDAGREELASKERAEGDIIARYLPKQLSDEELDAVVTKALAAVEQETGER 120
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
P M+QMG VMK A+ AG+ADG+R++A VK++L
Sbjct 121 PGMRQMGQVMKVASAEVAGRADGSRVAAMVKQKL 154
>gi|134096926|ref|YP_001102587.1| GatB/YqeY [Saccharopolyspora erythraea NRRL 2338]
gi|291006632|ref|ZP_06564605.1| GatB/YqeY [Saccharopolyspora erythraea NRRL 2338]
gi|133909549|emb|CAL99661.1| GatB/YqeY [Saccharopolyspora erythraea NRRL 2338]
Length=156
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/154 (54%), Positives = 106/154 (69%), Gaps = 0/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
MAELKS+LR+DLT AMK +D T +RM LAA+ EEVSGKQAREL+D+EV++VL +E+
Sbjct 1 MAELKSKLRADLTAAMKERDNTVTGVLRMALAAVNVEEVSGKQARELTDEEVLRVLGKEA 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR E+AE + GR E AA E AE I+ YLP L + ELA + +AE+ ELG +
Sbjct 61 KKRDESAEAFAAAGRDEQAAAERAEGEILRRYLPKQLDDAELAQLVQDTVAELTAELGEK 120
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
P MKQMG VMKA AG+A+G R++ VK L
Sbjct 121 PGMKQMGQVMKAVNAKVAGRAEGGRVAPLVKSAL 154
>gi|256374389|ref|YP_003098049.1| GatB/YqeY domain-containing protein [Actinosynnema mirum DSM
43827]
gi|255918692|gb|ACU34203.1| GatB/YqeY domain protein [Actinosynnema mirum DSM 43827]
Length=155
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/154 (54%), Positives = 109/154 (71%), Gaps = 1/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
MA+LK++L+SDLT AMK ++ + +RM L A+ EEVSGK AREL+DDEV+KVL RE
Sbjct 1 MAQLKARLQSDLTGAMKNRESVTAGALRMALTAVTNEEVSGKTARELTDDEVLKVLGREV 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR EAAE + GR E A E E I++ YLP L + ELA + D A+AE+A+ G +
Sbjct 61 KKRREAAEAFANAGRDEKAELERQELAILEAYLPKQLDDAELAALVDEAVAELAQG-GEQ 119
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
P +KQMGLVMKAA AG+A+G R++AAVK RL
Sbjct 120 PGLKQMGLVMKAANAKVAGRAEGGRVAAAVKARL 153
>gi|25026827|ref|NP_736881.1| hypothetical protein CE0271 [Corynebacterium efficiens YS-314]
gi|259506111|ref|ZP_05749013.1| GatB/Yqey domain protein [Corynebacterium efficiens YS-314]
gi|23492106|dbj|BAC17081.1| hypothetical protein [Corynebacterium efficiens YS-314]
gi|259166285|gb|EEW50839.1| GatB/Yqey domain protein [Corynebacterium efficiens YS-314]
Length=154
Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/154 (52%), Positives = 112/154 (73%), Gaps = 1/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M++LK ++R DLT +MK +DK T T+RMLL+A+ EE +G + EL+D++V++++ARE
Sbjct 1 MSDLKKKIREDLTTSMKARDKDTTGTLRMLLSALTQEETTGAK-HELTDEDVLRIIAREI 59
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR E+AEIYTQNGR ELA+ E EA I++ Y P L++ EL + D +IAE+++ G
Sbjct 60 KKRRESAEIYTQNGREELASAELKEASILEAYQPAQLSDDELEALIDDSIAEISQATGEE 119
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
+MK MG VMKAAT AAG+ DG RLS AVK RL
Sbjct 120 VTMKHMGQVMKAATGKAAGQVDGKRLSTAVKSRL 153
>gi|296141627|ref|YP_003648870.1| hypothetical protein Tpau_3960 [Tsukamurella paurometabola DSM
20162]
gi|296029761|gb|ADG80531.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=154
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/154 (58%), Positives = 111/154 (73%), Gaps = 1/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M+E+K+ +R DL AMK +D L T T+RMLL+AIQ EE SG A L+D+E +KV+ARE
Sbjct 1 MSEVKAAIRDDLKTAMKAKDTLVTGTLRMLLSAIQNEETSG-TAHALTDEEFLKVVAREV 59
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KRGEAAEIYT NGR ELAA E AEA ++ YLP L++ EL + D A+A+V +LG
Sbjct 60 KKRGEAAEIYTANGREELAAQERAEAEVMSRYLPKQLSDDELNSLVDDAVAQVKADLGEA 119
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
P+++ MG VMK A AAG ADG RLSAAVK RL
Sbjct 120 PTVRNMGQVMKIANAKAAGAADGKRLSAAVKARL 153
>gi|38232918|ref|NP_938685.1| hypothetical protein DIP0297 [Corynebacterium diphtheriae NCTC
13129]
gi|38199176|emb|CAE48801.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length=154
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/151 (58%), Positives = 112/151 (75%), Gaps = 1/151 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M+ELK+++R+DLT AMK ++K RT T+RMLLAAIQTEE SG + EL+D++V+KV+ARE
Sbjct 1 MSELKNKIRADLTTAMKAREKERTGTLRMLLAAIQTEETSGSK-HELTDEDVLKVIAREI 59
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR E+AE+Y + GR ELA E EA I+ EY P L + ELA + A+A+V ELG
Sbjct 60 KKRRESAEVYAEAGRSELADAETNEANILAEYQPQQLDDDELAALVAEAVAQVKAELGEG 119
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVK 151
SMKQMG VMK AT AAG+ADG RLS AV+
Sbjct 120 VSMKQMGQVMKLATAQAAGRADGKRLSTAVR 150
>gi|227502457|ref|ZP_03932506.1| possible glutaminyl-tRNA synthase b subunit [Corynebacterium
accolens ATCC 49725]
gi|227076826|gb|EEI14789.1| possible glutaminyl-tRNA synthase b subunit [Corynebacterium
accolens ATCC 49725]
Length=154
Score = 143 bits (361), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/154 (52%), Positives = 106/154 (69%), Gaps = 1/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M+ELK +R+DL +MK ++K RT+ IR LLAAIQ EE +G + EL D++++KV+ARE
Sbjct 1 MSELKDTIRADLKTSMKAKEKQRTSAIRALLAAIQAEETTGSR-HELEDEDILKVIAREI 59
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR E+AE+Y +NGR ELA E + + Y P L + EL + + AIAEV +E G
Sbjct 60 KKRRESAEVYEENGRPELAEAELVDVPFFEAYQPRQLDDAELKALVEEAIAEVEKENGEA 119
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
P+MKQMG VMK A AAG+ADG RLSA VK +L
Sbjct 120 PTMKQMGAVMKVANAKAAGQADGKRLSAEVKGQL 153
>gi|306835028|ref|ZP_07468074.1| GatB/Yqey domain protein [Corynebacterium accolens ATCC 49726]
gi|304569086|gb|EFM44605.1| GatB/Yqey domain protein [Corynebacterium accolens ATCC 49726]
Length=157
Score = 143 bits (361), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/154 (52%), Positives = 106/154 (69%), Gaps = 1/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M+ELK +R+DL +MK ++K RT+ IR LLAAIQ EE +G + EL D++++KV+ARE
Sbjct 4 MSELKDTIRADLKTSMKAKEKQRTSAIRALLAAIQAEETTGSR-HELEDEDILKVIAREI 62
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR E+AE+Y +NGR ELA E + + Y P L + EL + + AIAEV +E G
Sbjct 63 KKRRESAEVYEENGRPELAEAELVDVPFFEAYQPRQLDDAELKALVEEAIAEVEKENGEA 122
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
P+MKQMG VMK A AAG+ADG RLSA VK +L
Sbjct 123 PTMKQMGAVMKVANAKAAGQADGKRLSAEVKGQL 156
>gi|300779999|ref|ZP_07089855.1| GatB/YqeY domain protein [Corynebacterium genitalium ATCC 33030]
gi|300534109|gb|EFK55168.1| GatB/YqeY domain protein [Corynebacterium genitalium ATCC 33030]
Length=149
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/154 (56%), Positives = 106/154 (69%), Gaps = 6/154 (3%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M+ELK Q+R+DL +AMK ++K RT IRMLLAAIQTEE G + EL D V+KV+ARE
Sbjct 1 MSELKDQIRADLKEAMKAKEKDRTGAIRMLLAAIQTEETEGAK-HELDDAAVLKVVAREI 59
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR E+AEIY QN R +LA E AE +++ Y P L + ELA + D A+ E
Sbjct 60 KKRRESAEIYQQNDRQDLADAELAEVAVLEAYQPKQLDDVELAALIDEAVTETGA----- 114
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
SMK+MG VMKAAT AAG+ADG RLSAAVK RL
Sbjct 115 TSMKEMGQVMKAATGKAAGRADGKRLSAAVKARL 148
>gi|255324174|ref|ZP_05365296.1| GatB/Yqey domain protein [Corynebacterium tuberculostearicum
SK141]
gi|311741064|ref|ZP_07714889.1| GatB/Yqey domain protein [Corynebacterium pseudogenitalium ATCC
33035]
gi|255298690|gb|EET77985.1| GatB/Yqey domain protein [Corynebacterium tuberculostearicum
SK141]
gi|311303866|gb|EFQ79944.1| GatB/Yqey domain protein [Corynebacterium pseudogenitalium ATCC
33035]
Length=154
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/154 (52%), Positives = 103/154 (67%), Gaps = 1/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M+ELK +R+DL AMK ++K RT+ IR LLAAIQ EE +G + EL D +++KV+ARE
Sbjct 1 MSELKQTIRADLKTAMKAKEKQRTSAIRALLAAIQAEETNGSR-HELEDADILKVIAREI 59
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR E+AE+Y +N R ELA E A+ + Y P L E EL + +IAEV E G
Sbjct 60 KKRRESAEVYEENSRPELAEAELADVPFFEAYQPRQLDESELKALVKESIAEVEAENGEA 119
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
P+MKQMG VMK A AAG+ADG RLSA VK +L
Sbjct 120 PTMKQMGAVMKVANAKAAGQADGKRLSAEVKSQL 153
>gi|296128397|ref|YP_003635647.1| hypothetical protein Cfla_0535 [Cellulomonas flavigena DSM 20109]
gi|296020212|gb|ADG73448.1| hypothetical protein Cfla_0535 [Cellulomonas flavigena DSM 20109]
Length=150
Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/148 (53%), Positives = 107/148 (73%), Gaps = 5/148 (3%)
Query 7 QLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARESRKRGEA 66
+L +DLT A+K +D LRT+T+R L+ A++ EE +G AREL++DEV+KVLARE++KR E+
Sbjct 6 RLTADLTTALKARDTLRTSTLRQLIGAVRHEEKAGTVARELTEDEVLKVLAREAKKRRES 65
Query 67 AEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHRPSMKQM 126
A+IYT G + AATE AEA ++DEYLPT L++ ELA + D +A+ ++K+M
Sbjct 66 AQIYTDAGAADRAATETAEADVVDEYLPTRLSDDELAALVDAVVADTGA-----STLKEM 120
Query 127 GLVMKAATVIAAGKADGARLSAAVKERL 154
G VMK AT AAG+ADG LSA V+ RL
Sbjct 121 GAVMKEATARAAGRADGKALSALVRARL 148
>gi|72160512|ref|YP_288169.1| hypothetical protein Tfu_0108 [Thermobifida fusca YX]
gi|71914244|gb|AAZ54146.1| conserved hypothetical protein [Thermobifida fusca YX]
Length=167
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/154 (52%), Positives = 105/154 (69%), Gaps = 5/154 (3%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M+ELK++L++DLT AMK +D +RT +RMLL AI EEVSGK ARELSDDE+IKV+ +E
Sbjct 18 MSELKTRLQADLTAAMKARDAVRTRALRMLLTAISNEEVSGKSARELSDDEIIKVITKEV 77
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR EAAE + Q GR + AA E AE ++ EYLP L++ ELAD+ AIAE
Sbjct 78 KKRREAAEAFEQGGRADRAADERAEGEVLSEYLPEQLSDEELADLVRAAIAEAGV----- 132
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
+K MG VMK T AG+A+G R++ V+ +L
Sbjct 133 SDVKGMGAVMKLLTPRVAGRAEGRRVADEVRRQL 166
>gi|331694278|ref|YP_004330517.1| hypothetical protein Psed_0392 [Pseudonocardia dioxanivorans
CB1190]
gi|326948967|gb|AEA22664.1| hypothetical protein Psed_0392 [Pseudonocardia dioxanivorans
CB1190]
Length=162
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/131 (56%), Positives = 97/131 (75%), Gaps = 0/131 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
++ELK +LR DLT AMK +D+L +T+RM L AI EV+G +ARELSDDEV+KV+A+E+
Sbjct 8 VSELKQRLRDDLTAAMKARDELVKSTLRMTLTAIGNAEVAGTEARELSDDEVLKVIAKEA 67
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR E+AE +T GR ELAA E AEA ++ YLPT LT+ ELA +A +A+ E ELG +
Sbjct 68 KKRAESAEAFTAGGRAELAAQELAEADVLARYLPTQLTDDELAVIARSAVDETEAELGAK 127
Query 121 PSMKQMGLVMK 131
P +QMG VMK
Sbjct 128 PGPRQMGQVMK 138
>gi|256398105|ref|YP_003119669.1| hypothetical protein Caci_9015 [Catenulispora acidiphila DSM
44928]
gi|256364331|gb|ACU77828.1| conserved hypothetical protein [Catenulispora acidiphila DSM
44928]
Length=150
Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/154 (54%), Positives = 103/154 (67%), Gaps = 5/154 (3%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M LK LR+DLT AMK +D+L TAT+RM L A+ TEEV+GKQAR LSD EV++VL RE+
Sbjct 1 MTALKETLRTDLTAAMKGRDELVTATLRMALTAVGTEEVAGKQARVLSDAEVVQVLTREA 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR EAAE + GR E AA E AE ++ YLP L++ ELA++ AIAE E
Sbjct 61 KKRREAAEAFENGGRPEQAAREKAEGEVLARYLPAQLSDEELAELVAAAIAETGAE---- 116
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
K MGLVMKA AG+A+G R++AAVK L
Sbjct 117 -GPKGMGLVMKALNPKIAGRAEGGRVAAAVKSAL 149
>gi|227505986|ref|ZP_03936035.1| possible glutaminyl-tRNA synthase b subunit [Corynebacterium
striatum ATCC 6940]
gi|227197420|gb|EEI77468.1| possible glutaminyl-tRNA synthase b subunit [Corynebacterium
striatum ATCC 6940]
Length=154
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/154 (51%), Positives = 104/154 (68%), Gaps = 1/154 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M++LK +R+DL AMK ++K RT+ IR LLAAIQ EE +G + EL+D++V+KV+ARE
Sbjct 1 MSQLKETIRADLKTAMKAREKERTSAIRSLLAAIQAEETNGSR-HELTDEDVLKVIAREI 59
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR E+AE+Y +NGR ELA E E + Y P L + L + AIAEV + G
Sbjct 60 KKRRESAEVYAENGRQELADAELVEVPFFEAYQPEQLDDAALDALVSEAIAEVEADSGEA 119
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
++KQMG VMK AT AAG+ADG RLS AVK +L
Sbjct 120 ATIKQMGNVMKVATAKAAGRADGKRLSRAVKAKL 153
>gi|300857616|ref|YP_003782599.1| hypothetical protein cpfrc_00199 [Corynebacterium pseudotuberculosis
FRC41]
gi|300685070|gb|ADK27992.1| hypothetical protein cpfrc_00199 [Corynebacterium pseudotuberculosis
FRC41]
gi|302205354|gb|ADL09696.1| Uncharacterized protein yqeY [Corynebacterium pseudotuberculosis
C231]
gi|340539278|gb|ADL20102.2| Uncharacterized protein yqeY [Corynebacterium pseudotuberculosis
1002]
gi|341824019|gb|AEK91540.1| Uncharacterized protein yqeY [Corynebacterium pseudotuberculosis
PAT10]
Length=153
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/151 (57%), Positives = 108/151 (72%), Gaps = 2/151 (1%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M+ELK ++R+DLT AMK ++K RT T+RMLLAAIQTEE SG + EL+D +V+KV+ARE
Sbjct 1 MSELKKKIRADLTTAMKAREKERTGTLRMLLAAIQTEETSGTK-HELTDGDVLKVIAREI 59
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR E+AE+Y GR ELA E EA I+ EY P L + +LA + A+ EVA E G
Sbjct 60 KKRRESAEVYAGAGRQELADAETQEADILAEYQPAQLDDAQLAALVAQAVEEVAAEHGE- 118
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVK 151
+MKQMG VMK AT AAG+ADG RLS AV+
Sbjct 119 ATMKQMGQVMKIATAKAAGQADGKRLSTAVR 149
>gi|308275592|gb|ADO25491.1| atB/YqeY domain protein [Corynebacterium pseudotuberculosis I19]
Length=200
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/151 (57%), Positives = 108/151 (72%), Gaps = 2/151 (1%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M+ELK ++R+DLT AMK ++K RT T+RMLLAAIQTEE SG + EL+D +V+KV+ARE
Sbjct 48 MSELKKKIRADLTTAMKAREKERTGTLRMLLAAIQTEETSGTK-HELTDGDVLKVIAREI 106
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR E+AE+Y GR ELA E EA I+ EY P L + +LA + A+ EVA E G
Sbjct 107 KKRRESAEVYAGAGRQELADAETQEADILAEYQPAQLDDAQLAALVAQAVEEVAAEHGE- 165
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVK 151
+MKQMG VMK AT AAG+ADG RLS AV+
Sbjct 166 ATMKQMGQVMKIATAKAAGQADGKRLSTAVR 196
>gi|225022060|ref|ZP_03711252.1| hypothetical protein CORMATOL_02093 [Corynebacterium matruchotii
ATCC 33806]
gi|305680370|ref|ZP_07403178.1| YqeY-like protein [Corynebacterium matruchotii ATCC 14266]
gi|224945181|gb|EEG26390.1| hypothetical protein CORMATOL_02093 [Corynebacterium matruchotii
ATCC 33806]
gi|305659901|gb|EFM49400.1| YqeY-like protein [Corynebacterium matruchotii ATCC 14266]
Length=152
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/151 (52%), Positives = 102/151 (68%), Gaps = 3/151 (1%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M+ L++Q+R D+ AMK DK RT T+RM LAA+ EE SG + +L DDEV+KVLARE
Sbjct 1 MSNLQTQIRDDMKTAMKAHDKQRTGTLRMFLAALTAEETSGAR-HKLDDDEVLKVLAREI 59
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR E+A++Y GR ELA E AE +++EY PT LT+ E+ + AI +VA G
Sbjct 60 KKRKESAQVYADAGRQELADQELAEVAVLEEYQPTQLTDDEVTALVQAAITDVAA--GGD 117
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVK 151
SMK MG VM+ T AAG+ADG RLSAAV+
Sbjct 118 ISMKLMGPVMQQVTKTAAGRADGKRLSAAVR 148
>gi|227832030|ref|YP_002833737.1| hypothetical protein cauri_0200 [Corynebacterium aurimucosum
ATCC 700975]
gi|262184115|ref|ZP_06043536.1| hypothetical protein CaurA7_08998 [Corynebacterium aurimucosum
ATCC 700975]
gi|227453046|gb|ACP31799.1| hypothetical protein cauri_0200 [Corynebacterium aurimucosum
ATCC 700975]
Length=154
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/151 (50%), Positives = 104/151 (69%), Gaps = 1/151 (0%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M+ELK +R+DL +MK +DK RT+ IR LL+AIQ EE +G + E++D++++KV+ARE
Sbjct 1 MSELKETIRADLKTSMKAKDKARTSAIRSLLSAIQAEETTGSR-HEITDEDILKVIAREI 59
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR E+AE+Y +NGR ELA E A+ + Y P L + L + +IAEV ++ G
Sbjct 60 KKRRESAEVYAENGRPELAEEELADVPFFEAYQPEQLDDDSLNTLVAESIAEVEKDSGEP 119
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVK 151
++KQMG VMK AT AAG+ADG RLS AVK
Sbjct 120 VTIKQMGNVMKVATAKAAGRADGKRLSTAVK 150
>gi|19551528|ref|NP_599530.1| hypothetical protein NCgl0273 [Corynebacterium glutamicum ATCC
13032]
gi|62389175|ref|YP_224577.1| hypothetical protein cg0335 [Corynebacterium glutamicum ATCC
13032]
gi|145294409|ref|YP_001137230.1| hypothetical protein cgR_0364 [Corynebacterium glutamicum R]
gi|21323041|dbj|BAB97670.1| Uncharacterized ACR [Corynebacterium glutamicum ATCC 13032]
gi|41324508|emb|CAF18848.1| conserved hypothetical protein, GatB/Yqey domain [Corynebacterium
glutamicum ATCC 13032]
gi|140844329|dbj|BAF53328.1| hypothetical protein [Corynebacterium glutamicum R]
Length=151
Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/154 (56%), Positives = 110/154 (72%), Gaps = 5/154 (3%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M+ELK ++R+DLT AMK +DK T T+RMLL+A+ EE SG + EL+D+EV+KV+ARE
Sbjct 1 MSELKDKIRADLTTAMKARDKDTTGTLRMLLSALTQEETSGTK-HELNDEEVLKVIAREI 59
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR E+AE+YT+NGR ELA E EA I++ Y P L + +L + D AIAEV G
Sbjct 60 KKRRESAEVYTENGRQELADVELKEAAILEGYQPEQLDDDQLNALIDEAIAEV----GGE 115
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
MK+MG +MKAAT AAG+ADG RLS AVK RL
Sbjct 116 ADMKKMGQIMKAATAKAAGRADGKRLSTAVKSRL 149
>gi|344045200|gb|EGV40873.1| hypothetical protein CgS9114_05922 [Corynebacterium glutamicum
S9114]
Length=151
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/154 (55%), Positives = 110/154 (72%), Gaps = 5/154 (3%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M+ELK ++R+DLT AMK +DK T T+RMLL+A+ EE +G + EL+D+EV+KV+ARE
Sbjct 1 MSELKGKIRADLTTAMKARDKDTTGTLRMLLSALTQEETTGAK-HELNDEEVLKVIAREI 59
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR E+AE+YT+NGR ELA E EA I++ Y P L + +L + D AIAEV G
Sbjct 60 KKRRESAEVYTENGRQELADVELKEAAILEGYQPEQLDDDQLNALIDEAIAEV----GGE 115
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
MK+MG +MKAAT AAG+ADG RLS AVK RL
Sbjct 116 ADMKKMGQIMKAATAKAAGRADGKRLSTAVKSRL 149
>gi|254391715|ref|ZP_05006912.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|326441883|ref|ZP_08216617.1| hypothetical protein SclaA2_12504 [Streptomyces clavuligerus
ATCC 27064]
gi|197705399|gb|EDY51211.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length=154
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/154 (52%), Positives = 102/154 (67%), Gaps = 2/154 (1%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M LKS+L DLT A+K +D+LR++TIR+ LAAI EEVSGK ARELSDDEV KV+ARE+
Sbjct 1 MTTLKSKLHDDLTTAIKARDELRSSTIRLTLAAISKEEVSGKTARELSDDEVQKVIAREA 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR EAA+ + Q GR E A E AE ++D YLP LT+ EL + A+AE
Sbjct 61 KKRREAADAFAQGGRAEQAERERAEGAVLDGYLPQQLTDDELTGIVTEAVAEARAAGAEG 120
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
P + MG VMK AG+A+G R++AAVK L
Sbjct 121 P--RAMGAVMKIVNPKVAGRAEGGRVAAAVKRLL 152
>gi|294813405|ref|ZP_06772048.1| YqeY domain-containing protein [Streptomyces clavuligerus ATCC
27064]
gi|294326004|gb|EFG07647.1| YqeY domain-containing protein [Streptomyces clavuligerus ATCC
27064]
Length=168
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/154 (52%), Positives = 102/154 (67%), Gaps = 2/154 (1%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M LKS+L DLT A+K +D+LR++TIR+ LAAI EEVSGK ARELSDDEV KV+ARE+
Sbjct 15 MTTLKSKLHDDLTTAIKARDELRSSTIRLTLAAISKEEVSGKTARELSDDEVQKVIAREA 74
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR EAA+ + Q GR E A E AE ++D YLP LT+ EL + A+AE
Sbjct 75 KKRREAADAFAQGGRAEQAERERAEGAVLDGYLPQQLTDDELTGIVTEAVAEARAAGAEG 134
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
P + MG VMK AG+A+G R++AAVK L
Sbjct 135 P--RAMGAVMKIVNPKVAGRAEGGRVAAAVKRLL 166
>gi|271962032|ref|YP_003336228.1| GatB/YqeY domain-containing protein [Streptosporangium roseum
DSM 43021]
gi|270505207|gb|ACZ83485.1| GatB/YqeY domain protein [Streptosporangium roseum DSM 43021]
Length=154
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/154 (49%), Positives = 104/154 (68%), Gaps = 5/154 (3%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M+ LK +L++DLT +MK++D++RT TIRM LAA+ EEV+GK ARELSDDE+IKVL +E+
Sbjct 4 MSTLKDKLKTDLTASMKSRDEVRTRTIRMALAAVNVEEVAGKTARELSDDEIIKVLTKEA 63
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR EAAE ++ GR E A E E +++EYLP L++ EL + D A+AE
Sbjct 64 KKRREAAEAFSGAGRTEQAQAEVDEQAVLEEYLPAQLSDEELGKLVDEAVAETGA----- 118
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
+ MG VMK AG+A+G R++ AV+ RL
Sbjct 119 AGPQAMGQVMKVLNPKVAGRAEGGRVAQAVRARL 152
>gi|213966303|ref|ZP_03394486.1| GatB/Yqey domain protein [Corynebacterium amycolatum SK46]
gi|213951076|gb|EEB62475.1| GatB/Yqey domain protein [Corynebacterium amycolatum SK46]
Length=153
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/151 (52%), Positives = 103/151 (69%), Gaps = 3/151 (1%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M+ELK+ + SD+T AMK +DK A +RML AAIQTEEVSG + EL+D+EV++V+ RE
Sbjct 1 MSELKNTIVSDMTAAMKARDKETVAALRMLKAAIQTEEVSGSK-HELTDEEVLRVIEREV 59
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR E+AE+Y +NGR ELA E AEA + Y P L + + ++ ++AEVA +
Sbjct 60 KKRRESAEMYAENGRQELADAELAEAEVFARYQPEQLDDDAVKNLVAESVAEVAGD--DA 117
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVK 151
PSMK MG VMK A AAG+ DG RLS AVK
Sbjct 118 PSMKIMGQVMKVAKEKAAGQVDGKRLSEAVK 148
>gi|297564219|ref|YP_003683192.1| hypothetical protein Ndas_5306 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848668|gb|ADH70686.1| hypothetical protein Ndas_5306 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length=151
Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/154 (49%), Positives = 105/154 (69%), Gaps = 5/154 (3%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M+ELK++L++DLT A+K +DK+RT T+RM+LAAI TEE +G +R L DDE+ ++L RE+
Sbjct 1 MSELKARLKNDLTTAIKARDKVRTGTLRMVLAAISTEEAAGSTSRSLGDDEITRLLTREA 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR EAAE + + R E AA E AE+ +I +YLP LT+ EL+ + A+ E E G R
Sbjct 61 KKRREAAEAFDKGDRPEQAAAERAESEVISDYLPKQLTDEELSSLVAEAVTETGAE-GPR 119
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
MG VMK AG+A+GAR++A VK +L
Sbjct 120 A----MGQVMKVVNPKIAGRAEGARVAAEVKRQL 149
>gi|297193060|ref|ZP_06910458.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|197719809|gb|EDY63717.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
Length=154
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/154 (49%), Positives = 101/154 (66%), Gaps = 2/154 (1%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M LKS+L+ DLT A++ +D+LR++T+R+ L+AI EEVSGK ARELSDDEV KV+A+E+
Sbjct 1 MTTLKSKLQEDLTAAIRARDELRSSTLRLTLSAITKEEVSGKTARELSDDEVQKVIAKEA 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR EAA+ + Q GR E A E AE I+D YLP LT+ EL + A+ E
Sbjct 61 KKRREAADAFAQGGRAEQAEREKAEGVILDAYLPQQLTDDELNQIVAQAVEEARSTGAEG 120
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
P + MG VMK AG+A+G R++A VK L
Sbjct 121 P--RAMGAVMKIVNPKVAGRAEGGRVAATVKRLL 152
>gi|311743391|ref|ZP_07717198.1| GatB/Yqey domain protein [Aeromicrobium marinum DSM 15272]
gi|311313459|gb|EFQ83369.1| GatB/Yqey domain protein [Aeromicrobium marinum DSM 15272]
Length=153
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/154 (51%), Positives = 101/154 (66%), Gaps = 3/154 (1%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M+ +K +LRSDLT +MK +D LR++TIRM+LAAI T EV+GK+ARELSDD+VI VL +E+
Sbjct 1 MSAMKDRLRSDLTASMKARDALRSSTIRMVLAAISTAEVAGKEARELSDDDVIAVLGKEA 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR E+AE + R LA E EA I+ EYLP LTE E+A + TA E A G
Sbjct 61 KKRRESAEAFDAGDRPALAQKERDEAAILAEYLPASLTEAEVAAIV-TAAVEQAGAAGQ- 118
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
MK MG VM G+ADG ++A VK +L
Sbjct 119 -GMKAMGAVMAVVQPQVKGRADGGVVAAEVKRQL 151
>gi|312194242|ref|YP_004014303.1| hypothetical protein FraEuI1c_0347 [Frankia sp. EuI1c]
gi|311225578|gb|ADP78433.1| hypothetical protein FraEuI1c_0347 [Frankia sp. EuI1c]
Length=151
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/154 (48%), Positives = 100/154 (65%), Gaps = 5/154 (3%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M LK +LR+DLT AMK +D+LRT+T+R+ ++A++ EV+GK A EL+DDEV KVL RE
Sbjct 1 MNTLKERLRADLTTAMKARDELRTSTLRLAISAVKEAEVAGKSAHELTDDEVEKVLTREV 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
RKR EAA+ Y GR E AA E +E ++ +YLP L + ELA + D +A+ G
Sbjct 61 RKRREAADAYAGAGRAEQAARERSEGEVLADYLPKQLGDDELAAIVDKVLAD-----GDF 115
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
K +G MKA I AG+ADG +++ VK RL
Sbjct 116 AGPKAIGPAMKAVQAIVAGRADGGKVAGLVKARL 149
>gi|296268187|ref|YP_003650819.1| GatB/YqeY domain-containing protein [Thermobispora bispora DSM
43833]
gi|296090974|gb|ADG86926.1| GatB/YqeY domain protein [Thermobispora bispora DSM 43833]
Length=151
Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/154 (50%), Positives = 104/154 (68%), Gaps = 5/154 (3%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M+ LK +L++DLT AMK +D++R TIRM LAAI EV+G++ARELSDDEVIKVL +E+
Sbjct 1 MSALKDRLQADLTAAMKARDEVRMRTIRMALAAINVAEVAGEKARELSDDEVIKVLTKEA 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR EAA ++ GR + A E E +++EYLP L++ EL + D AIAE +
Sbjct 61 KKRREAATAFSDAGRADRAQAELDELAVLEEYLPAQLSDEELNKLIDEAIAETGAQ---- 116
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
K MG VMK T AG+A+GAR++ AV+ RL
Sbjct 117 -GPKAMGQVMKVLTPRIAGRAEGARVAQAVRARL 149
>gi|297201313|ref|ZP_06918710.1| GatB/Yqey domain-containing protein [Streptomyces sviceus ATCC
29083]
gi|197712826|gb|EDY56860.1| GatB/Yqey domain-containing protein [Streptomyces sviceus ATCC
29083]
Length=154
Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/154 (48%), Positives = 101/154 (66%), Gaps = 2/154 (1%)
Query 1 MAELKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARES 60
M LKS+L+ DL A+K +D+LR++T+RM LAAI EEV+GK+ RELSD EV+KV+ +E+
Sbjct 1 MTTLKSKLQEDLNAAIKGRDELRSSTLRMTLAAITNEEVAGKEKRELSDAEVLKVITKEA 60
Query 61 RKRGEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHR 120
+KR EAA+ + Q GR E A E AE ++ EYLP L++ EL D+ A+ E
Sbjct 61 KKRREAADAFAQGGRAESAEREKAEGEVLAEYLPQQLSDEELNDIVAQAVEEAKATGAEG 120
Query 121 PSMKQMGLVMKAATVIAAGKADGARLSAAVKERL 154
P + MG VMK AG A+G R++AAVK+ L
Sbjct 121 P--RAMGAVMKIVNPKVAGLAEGGRVAAAVKKHL 152
>gi|337766884|emb|CCB75595.1| conserved protein of unknown function [Streptomyces cattleya
NRRL 8057]
Length=155
Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/151 (53%), Positives = 103/151 (69%), Gaps = 2/151 (1%)
Query 4 LKSQLRSDLTQAMKTQDKLRTATIRMLLAAIQTEEVSGKQARELSDDEVIKVLARESRKR 63
LK +L+ DLT A+K +D++R A +R+ L+A+ EE +G QARELSDDEV+KV+ RE++KR
Sbjct 5 LKQRLQEDLTVALKARDEVRLAALRLTLSAVSKEETAGTQARELSDDEVLKVITREAKKR 64
Query 64 GEAAEIYTQNGRGELAATEHAEARIIDEYLPTPLTEGELADVADTAIAEVAEELGHRPSM 123
EAAE + Q GR E AA E AE I+ EYLP LT+ EL + D A+AE A P
Sbjct 65 REAAEAFEQGGRSESAARERAEGEILAEYLPKQLTDEELGALVDEAVAEAAASGTEGP-- 122
Query 124 KQMGLVMKAATVIAAGKADGARLSAAVKERL 154
K MG VMK A AG+A+G R++AAVK RL
Sbjct 123 KAMGAVMKIANAKIAGRAEGGRVAAAVKRRL 153
Lambda K H
0.311 0.125 0.317
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131222683000
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40