BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3689

Length=451
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15610825|ref|NP_218206.1|  transmembrane protein [Mycobacteriu...   857    0.0   
gi|31794860|ref|NP_857353.1|  transmembrane protein [Mycobacteriu...   855    0.0   
gi|289572337|ref|ZP_06452564.1|  transmembrane protein [Mycobacte...   854    0.0   
gi|308232533|ref|ZP_07416382.2|  transmembrane protein [Mycobacte...   765    0.0   
gi|323717551|gb|EGB26753.1|  membrane protein [Mycobacterium tube...   763    0.0   
gi|240172916|ref|ZP_04751575.1|  hypothetical protein MkanA1_2662...   391    2e-106
gi|183985168|ref|YP_001853459.1|  hypothetical protein MMAR_5199 ...   389    6e-106
gi|118619432|ref|YP_907764.1|  hypothetical protein MUL_4272 [Myc...   386    4e-105
gi|254820808|ref|ZP_05225809.1|  hypothetical protein MintA_12818...   354    2e-95 
gi|41406460|ref|NP_959296.1|  hypothetical protein MAP0362c [Myco...   353    2e-95 
gi|118462736|ref|YP_879700.1|  hypothetical protein MAV_0415 [Myc...   340    3e-91 
gi|336460864|gb|EGO39749.1|  hypothetical protein MAPs_36870 [Myc...   327    4e-87 
gi|296166774|ref|ZP_06849196.1|  transmembrane protein [Mycobacte...   306    7e-81 
gi|126437789|ref|YP_001073480.1|  hypothetical protein Mjls_5225 ...   297    2e-78 
gi|108801820|ref|YP_642017.1|  hypothetical protein Mmcs_4857 [My...   295    8e-78 
gi|254773420|ref|ZP_05214936.1|  hypothetical protein MaviaA2_019...   287    3e-75 
gi|333992608|ref|YP_004525222.1|  transmembrane protein [Mycobact...   278    2e-72 
gi|118468350|ref|YP_890435.1|  integral membrane protein [Mycobac...   273    5e-71 
gi|342861948|ref|ZP_08718592.1|  hypothetical protein MCOL_23775 ...   266    4e-69 
gi|145221932|ref|YP_001132610.1|  hypothetical protein Mflv_1340 ...   258    2e-66 
gi|120406399|ref|YP_956228.1|  putative transmembrane protein [My...   219    1e-54 
gi|315446331|ref|YP_004079210.1|  hypothetical protein Mspyr1_483...   212    1e-52 
gi|169627496|ref|YP_001701145.1|  hypothetical protein MAB_0392c ...   203    5e-50 
gi|296139166|ref|YP_003646409.1|  hypothetical protein Tpau_1442 ...   199    7e-49 
gi|297562676|ref|YP_003681650.1|  glycerophosphoryl diester phosp...   189    7e-46 
gi|271962952|ref|YP_003337148.1|  hypothetical protein Sros_1411 ...   171    3e-40 
gi|154509503|ref|ZP_02045145.1|  hypothetical protein ACTODO_0203...   154    2e-35 
gi|293189435|ref|ZP_06608155.1|  putative membrane protein [Actin...   150    5e-34 
gi|269794262|ref|YP_003313717.1|  hypothetical protein Sked_09330...   147    5e-33 
gi|329944313|ref|ZP_08292572.1|  hypothetical protein HMPREF9056_...   144    3e-32 
gi|227497999|ref|ZP_03928175.1|  possible integral membrane prote...   142    1e-31 
gi|291439273|ref|ZP_06578663.1|  integral membrane protein [Strep...   141    3e-31 
gi|345015648|ref|YP_004818002.1|  integral membrane protein [Stre...   139    1e-30 
gi|317508341|ref|ZP_07966016.1|  hypothetical protein HMPREF9336_...   138    2e-30 
gi|320533911|ref|ZP_08034488.1|  hypothetical protein HMPREF9057_...   137    4e-30 
gi|29831604|ref|NP_826238.1|  integral membrane protein [Streptom...   135    2e-29 
gi|239988167|ref|ZP_04708831.1|  putative integral membrane prote...   133    5e-29 
gi|297200107|ref|ZP_06917504.1|  integral membrane protein [Strep...   133    5e-29 
gi|21221458|ref|NP_627237.1|  integral membrane protein [Streptom...   133    7e-29 
gi|116671259|ref|YP_832192.1|  integral membrane protein [Arthrob...   132    1e-28 
gi|291445151|ref|ZP_06584541.1|  integral membrane protein [Strep...   132    2e-28 
gi|318081807|ref|ZP_07989116.1|  integral membrane protein [Strep...   131    2e-28 
gi|269957299|ref|YP_003327088.1|  hypothetical protein Xcel_2515 ...   129    9e-28 
gi|317123407|ref|YP_004097519.1|  hypothetical protein Intca_0235...   128    2e-27 
gi|343523441|ref|ZP_08760402.1|  putative membrane protein [Actin...   128    2e-27 
gi|158317587|ref|YP_001510095.1|  hypothetical protein Franean1_5...   128    2e-27 
gi|290959915|ref|YP_003491097.1|  protein [Streptomyces scabiei 8...   127    4e-27 
gi|291453739|ref|ZP_06593129.1|  integral membrane protein [Strep...   127    4e-27 
gi|302544905|ref|ZP_07297247.1|  putative membrane protein [Strep...   127    4e-27 
gi|119718127|ref|YP_925092.1|  hypothetical protein Noca_3907 [No...   125    2e-26 


>gi|15610825|ref|NP_218206.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
 gi|15843307|ref|NP_338344.1| hypothetical protein MT3791 [Mycobacterium tuberculosis CDC1551]
 gi|148663552|ref|YP_001285075.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra]
 30 more sequence titles
 Length=451

 Score =  857 bits (2214),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 450/451 (99%), Positives = 451/451 (100%), Gaps = 0/451 (0%)

Query  1    LHKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP  60
            +HKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP
Sbjct  1    MHKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP  60

Query  61   AGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVA  120
            AGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVA
Sbjct  61   AGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVA  120

Query  121  PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF  180
            PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF
Sbjct  121  PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF  180

Query  181  GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW  240
            GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW
Sbjct  181  GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW  240

Query  241  AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA  300
            AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA
Sbjct  241  AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA  300

Query  301  YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF  360
            YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF
Sbjct  301  YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF  360

Query  361  MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF  420
            MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF
Sbjct  361  MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF  420

Query  421  DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF  451
            DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF
Sbjct  421  DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF  451


>gi|31794860|ref|NP_857353.1| transmembrane protein [Mycobacterium bovis AF2122/97]
 gi|121639603|ref|YP_979827.1| putative transmembrane protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224992099|ref|YP_002646788.1| putative transmembrane protein [Mycobacterium bovis BCG str. 
Tokyo 172]
 14 more sequence titles
 Length=451

 Score =  855 bits (2210),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 449/451 (99%), Positives = 451/451 (100%), Gaps = 0/451 (0%)

Query  1    LHKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP  60
            +HKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP
Sbjct  1    MHKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP  60

Query  61   AGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVA  120
            AGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPP+A
Sbjct  61   AGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPLA  120

Query  121  PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF  180
            PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF
Sbjct  121  PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF  180

Query  181  GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW  240
            GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW
Sbjct  181  GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW  240

Query  241  AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA  300
            AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA
Sbjct  241  AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA  300

Query  301  YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF  360
            YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF
Sbjct  301  YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF  360

Query  361  MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF  420
            MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF
Sbjct  361  MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF  420

Query  421  DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF  451
            DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF
Sbjct  421  DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF  451


>gi|289572337|ref|ZP_06452564.1| transmembrane protein [Mycobacterium tuberculosis K85]
 gi|339633681|ref|YP_004725323.1| hypothetical protein MAF_36970 [Mycobacterium africanum GM041182]
 gi|289536768|gb|EFD41346.1| transmembrane protein [Mycobacterium tuberculosis K85]
 gi|339333037|emb|CCC28766.1| putative conserved transmembrane protein [Mycobacterium africanum 
GM041182]
Length=451

 Score =  854 bits (2207),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 448/451 (99%), Positives = 451/451 (100%), Gaps = 0/451 (0%)

Query  1    LHKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP  60
            +HKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP
Sbjct  1    MHKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP  60

Query  61   AGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVA  120
            AGYPPYPATPPGYGPPGYGAPP+YGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPP+A
Sbjct  61   AGYPPYPATPPGYGPPGYGAPPNYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPLA  120

Query  121  PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF  180
            PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF
Sbjct  121  PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF  180

Query  181  GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW  240
            GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW
Sbjct  181  GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW  240

Query  241  AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA  300
            AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA
Sbjct  241  AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA  300

Query  301  YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF  360
            YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF
Sbjct  301  YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF  360

Query  361  MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF  420
            MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF
Sbjct  361  MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF  420

Query  421  DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF  451
            DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF
Sbjct  421  DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF  451


>gi|308232533|ref|ZP_07416382.2| transmembrane protein [Mycobacterium tuberculosis SUMu001]
 gi|308369195|ref|ZP_07416914.2| transmembrane protein [Mycobacterium tuberculosis SUMu002]
 gi|308371418|ref|ZP_07424922.2| transmembrane protein [Mycobacterium tuberculosis SUMu003]
 11 more sequence titles
 Length=412

 Score =  765 bits (1975),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 411/412 (99%), Positives = 412/412 (100%), Gaps = 0/412 (0%)

Query  40   VSMLPPGYPVEPPPVAPGYAPAGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAA  99
            +SMLPPGYPVEPPPVAPGYAPAGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAA
Sbjct  1    MSMLPPGYPVEPPPVAPGYAPAGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAA  60

Query  100  PPGCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTA  159
            PPGCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTA
Sbjct  61   PPGCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTA  120

Query  160  MVVVTLQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSG  219
            MVVVTLQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSG
Sbjct  121  MVVVTLQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSG  180

Query  220  MLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAA  279
            MLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAA
Sbjct  181  MLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAA  240

Query  280  NEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVL  339
            NEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVL
Sbjct  241  NEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVL  300

Query  340  GIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTA  399
            GIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTA
Sbjct  301  GIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTA  360

Query  400  PFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF  451
            PFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF
Sbjct  361  PFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF  412


>gi|323717551|gb|EGB26753.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
 gi|339296498|gb|AEJ48609.1| putative transmembrane protein [Mycobacterium tuberculosis CCDC5079]
 gi|339300097|gb|AEJ52207.1| putative transmembrane protein [Mycobacterium tuberculosis CCDC5180]
Length=410

 Score =  763 bits (1969),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 410/410 (100%), Positives = 410/410 (100%), Gaps = 0/410 (0%)

Query  42   MLPPGYPVEPPPVAPGYAPAGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPP  101
            MLPPGYPVEPPPVAPGYAPAGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPP
Sbjct  1    MLPPGYPVEPPPVAPGYAPAGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPP  60

Query  102  GCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMV  161
            GCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMV
Sbjct  61   GCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMV  120

Query  162  VVTLQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGML  221
            VVTLQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGML
Sbjct  121  VVTLQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGML  180

Query  222  TVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANE  281
            TVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANE
Sbjct  181  TVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANE  240

Query  282  AAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGI  341
            AAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGI
Sbjct  241  AAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGI  300

Query  342  RLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPF  401
            RLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPF
Sbjct  301  RLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPF  360

Query  402  SAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF  451
            SAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF
Sbjct  361  SAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF  410


>gi|240172916|ref|ZP_04751575.1| hypothetical protein MkanA1_26622 [Mycobacterium kansasii ATCC 
12478]
Length=477

 Score =  391 bits (1004),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 238/331 (72%), Positives = 275/331 (84%), Gaps = 4/331 (1%)

Query  121  PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF  180
            PGAVKPGIIPLRPLTLSDI+NGA GYIR NPKATLGLTA+VVV +Q+I+L+A  GP+TA 
Sbjct  151  PGAVKPGIIPLRPLTLSDIYNGAAGYIRTNPKATLGLTAIVVVIMQVITLIATVGPLTAL  210

Query  181  GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW  240
              +      EL+  V G W  S  AS LV+WL G+LLSG+LTV+VGRAVFGSPIT+GEAW
Sbjct  211  NQLENQPSTELSLGVFGAWMGSVAASGLVTWLGGMLLSGILTVVVGRAVFGSPITIGEAW  270

Query  241  AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA  300
            A+VRGR+LAL GLALLEAAG+VA+ GL VVIL GVAAA N AAA L+G PLLL+VG+ LA
Sbjct  271  ARVRGRVLALIGLALLEAAGMVALGGLVVVILVGVAAAVNGAAAVLVGIPLLLLVGLLLA  330

Query  301  YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF  360
            YLY +L+FAPVLIVLERLP+V+A+ RSF LVR GFWRVLGIRLLT LVVG+VG A+AAPF
Sbjct  331  YLYTMLVFAPVLIVLERLPLVDAVIRSFRLVRGGFWRVLGIRLLTALVVGLVGGAVAAPF  390

Query  361  MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF  420
             I  +I+  VTAS+GS+ M LVG TLSA+G  I QI+TAPF+AGVVVLLYTDRR+RAEAF
Sbjct  391  SIASQILLGVTASEGSIGMLLVGTTLSAVGSAISQIITAPFTAGVVVLLYTDRRMRAEAF  450

Query  421  DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF  451
            DLVLQT    G AGGPA VESTDNLWLTRP+
Sbjct  451  DLVLQT----GAAGGPAAVESTDNLWLTRPY  477


>gi|183985168|ref|YP_001853459.1| hypothetical protein MMAR_5199 [Mycobacterium marinum M]
 gi|183178494|gb|ACC43604.1| conserved membrane protein [Mycobacterium marinum M]
Length=420

 Score =  389 bits (999),  Expect = 6e-106, Method: Compositional matrix adjust.
 Identities = 246/331 (75%), Positives = 279/331 (85%), Gaps = 5/331 (1%)

Query  121  PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF  180
            PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTA+VVV +Q+I+L+A  GP+ A 
Sbjct  95   PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAIVVVVMQVITLLATIGPLEAA  154

Query  181  GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW  240
                T  P EL+  VVG W+ S  A LLVSWL G+LLSG+LTV+VGRAVFGSPIT+ EAW
Sbjct  155  SRFDT-HPSELSWGVVGAWTGSAAAGLLVSWLGGMLLSGILTVVVGRAVFGSPITISEAW  213

Query  241  AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA  300
            A+VRGR+LAL GLALLE AG+VA+ GL VVIL GVAAAAN A AALLGFPL+L+VG+ +A
Sbjct  214  ARVRGRILALIGLALLEGAGLVALAGLVVVILVGVAAAANGATAALLGFPLVLLVGLLVA  273

Query  301  YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF  360
            YLY VL+FAPVLIVLERLP+V+AITRSFALV  GFWRVLGIRLLT +VVG+VG AI+APF
Sbjct  274  YLYTVLMFAPVLIVLERLPLVDAITRSFALVTGGFWRVLGIRLLTAIVVGLVGGAISAPF  333

Query  361  MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF  420
             IVG+I+   TAS+GS  M LVG TLS+IG  I QI+TAPF+AGVVVLLYTDRR+RAEAF
Sbjct  334  GIVGQILLGATASEGSTGMFLVGMTLSSIGSAISQIITAPFTAGVVVLLYTDRRMRAEAF  393

Query  421  DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF  451
            DLVLQT    G AGGPA VESTDNLWLTRP 
Sbjct  394  DLVLQT----GAAGGPAAVESTDNLWLTRPL  420


>gi|118619432|ref|YP_907764.1| hypothetical protein MUL_4272 [Mycobacterium ulcerans Agy99]
 gi|118571542|gb|ABL06293.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
Length=419

 Score =  386 bits (992),  Expect = 4e-105, Method: Compositional matrix adjust.
 Identities = 245/331 (75%), Positives = 278/331 (84%), Gaps = 5/331 (1%)

Query  121  PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF  180
            PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTA+VVV +Q+I+L+A  GP+ A 
Sbjct  94   PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAIVVVVMQVITLLAAIGPLEAA  153

Query  181  GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW  240
                T  P EL+  VVG W+ S  A LLVSWL G+LLSG+LTV+VGRAVFGSPIT+ EAW
Sbjct  154  SRFDT-HPSELSWGVVGAWTGSAAAGLLVSWLGGMLLSGILTVVVGRAVFGSPITISEAW  212

Query  241  AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA  300
            A+VRGR+LAL GLALLE AG+VA+ GL VVIL GVAAAAN A AALLGFPL+L+VG+ +A
Sbjct  213  ARVRGRILALIGLALLEGAGLVALAGLVVVILVGVAAAANGATAALLGFPLVLLVGLLVA  272

Query  301  YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF  360
            YLY VL+FAPVLIVLERLP+V+AITRSFALV  GFWRVLGIRLLT +VVG+VG AI+APF
Sbjct  273  YLYTVLMFAPVLIVLERLPLVDAITRSFALVTGGFWRVLGIRLLTAIVVGLVGGAISAPF  332

Query  361  MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF  420
             IVG+I+   TAS+GS  M LVG TLS+IG  I QI+TAPF+AGVVVLLYTDRR+RAEAF
Sbjct  333  GIVGQILLGATASEGSTGMFLVGMTLSSIGSAISQIITAPFTAGVVVLLYTDRRMRAEAF  392

Query  421  DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF  451
            DLVLQT    G AGGPA VESTD LWLTRP 
Sbjct  393  DLVLQT----GAAGGPAAVESTDTLWLTRPL  419


>gi|254820808|ref|ZP_05225809.1| hypothetical protein MintA_12818 [Mycobacterium intracellulare 
ATCC 13950]
Length=396

 Score =  354 bits (908),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 225/353 (64%), Positives = 265/353 (76%), Gaps = 15/353 (4%)

Query  100  PPGCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTA  159
            PPG G PP +G P GYG       VKPGIIPLRPLTL DIFNGAVGY+RANPKATLGLTA
Sbjct  58   PPGYGTPPAFGAPPGYG------TVKPGIIPLRPLTLGDIFNGAVGYVRANPKATLGLTA  111

Query  160  MVVVTLQIISLVALFGPMTAFGDIVT-GEPDELTGAVVGGWSASFGASLLVSWLAGVLLS  218
            +VVV +QII+ VA FGP+ A     T GEPD LT  V+G W+AS GA LLV WL G+LLS
Sbjct  112  IVVVVMQIITKVAFFGPLAAHDRFTTTGEPDTLTAGVLGAWTASVGAGLLVGWLGGMLLS  171

Query  219  GMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAA  278
            GMLTVIVGRAVFGSPIT+GE W ++RGRL AL GLAL+EA  V A+ GL  VI+  +AA 
Sbjct  172  GMLTVIVGRAVFGSPITIGETWTRIRGRLPALLGLALVEAVVVAALAGLVAVIIGVLAAI  231

Query  279  ANEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRV  338
             + AAA +LG PL+LVV  +L YLY V+LFAPVLIVLERLP+++AITRSF L+R+GFWRV
Sbjct  232  GSAAAAVVLGIPLVLVVLAALVYLYTVVLFAPVLIVLERLPVLDAITRSFKLIRNGFWRV  291

Query  339  LGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVT  398
            LGIR LT LV  +V NA+A PF IVG+    +T+S    T  L+   +  +G  IG+I+T
Sbjct  292  LGIRTLTFLVASIVANAVAVPFSIVGQFF-QITSSG---TAFLISTAILFVGAAIGEIIT  347

Query  399  APFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF  451
            APF+AGV+VLLYTDRR+RAEAFDLVLQT    G A GP    STD+LWLTRP 
Sbjct  348  APFNAGVIVLLYTDRRMRAEAFDLVLQT----GAAQGPYAAASTDHLWLTRPL  396


>gi|41406460|ref|NP_959296.1| hypothetical protein MAP0362c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41394809|gb|AAS02679.1| hypothetical protein MAP_0362c [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=419

 Score =  353 bits (907),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 237/455 (53%), Positives = 282/455 (62%), Gaps = 57/455 (12%)

Query  11   KPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAPAGYPPYPATP  70
            +      + K + RRQDG HDE                   PPV        + P  +  
Sbjct  6    RAGARVNVVKWSGRRQDGAHDE-------------------PPV--------HEPRGSVS  38

Query  71   PGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVAP---------  121
                    G PP+YGP   YG       A  G   P  YG   G  P   P         
Sbjct  39   APPPGYPVGPPPAYGPQSQYG-------AQYGAHFPGRYGAHYGPPPTYPPPGYPPAPAF  91

Query  122  ------GAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFG  175
                  G +KPGIIPLRPLTL DIFNGAVGYIRANPKATLGLTA+VV+ +QII+  A+ G
Sbjct  92   GPPPGYGVLKPGIIPLRPLTLGDIFNGAVGYIRANPKATLGLTAIVVIAMQIITKAAVLG  151

Query  176  PMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPIT  235
            P+ A+G       DELT  V+G WS S GA +LV WL G+LLSGMLTVIVGRAVFGS IT
Sbjct  152  PLAAYGRFTGDRSDELTAGVLGAWSVSVGAGVLVGWLGGMLLSGMLTVIVGRAVFGSSIT  211

Query  236  VGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVV  295
            +GE W K+RGRL AL GLALLEA  V A+ GL VV+++ +A   N AAA +LG PL+L V
Sbjct  212  IGETWTKIRGRLPALLGLALLEAVVVAAIAGLVVVVIAILATIGNAAAAVVLGIPLVLTV  271

Query  296  GVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNA  355
               L YLY V+LFAPVLIVLERLP+++AITRSF LVR GFWRVLGIR L  LV  VV NA
Sbjct  272  IAVLVYLYTVVLFAPVLIVLERLPVLDAITRSFQLVRRGFWRVLGIRALAFLVTAVVANA  331

Query  356  IAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRI  415
            +A PF IVG++     +S G  T  L+   + ++G  IG+I+TAPF+AGV+VLLYTDRR+
Sbjct  332  VAVPFSIVGQVFQ--ISSSG--TAFLISTAILSVGAAIGEIITAPFNAGVIVLLYTDRRM  387

Query  416  RAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRP  450
            RAEAFDLVLQ+    G A G     STD+LWLTRP
Sbjct  388  RAEAFDLVLQS----GAAQGSYAAASTDSLWLTRP  418


>gi|118462736|ref|YP_879700.1| hypothetical protein MAV_0415 [Mycobacterium avium 104]
 gi|118164023|gb|ABK64920.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=418

 Score =  340 bits (872),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 245/443 (56%), Positives = 289/443 (66%), Gaps = 34/443 (7%)

Query  11   KPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAPAG-YPPYPAT  69
            +      + K + RRQDG HDE                   PPV   + P G     P  
Sbjct  6    RAGARVNVVKWSGRRQDGAHDE-------------------PPV---HEPRGSVSAPPPG  43

Query  70   PPGYGPPGYGAPPSYGPPPGYGPP--LGYPAAPPGCGPPPGYGPPLGYGPPVAPGAVKPG  127
             P   PP YG+   YG   G   P   G    PP   PPPGY P   +GPP   G +KPG
Sbjct  44   YPVGPPPAYGSQSHYGTQYGAQYPGQYGVHYGPPPTYPPPGYPPAPAFGPPPGYGVLKPG  103

Query  128  IIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDIVTGE  187
            IIPLRPLTL DIFNGAVGYIRANPKATLGLTA+VV+ +QII+  A+ GP+ A+G      
Sbjct  104  IIPLRPLTLGDIFNGAVGYIRANPKATLGLTAIVVIAMQIITKAAVLGPLAAYGRFTGDR  163

Query  188  PDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAWAKVRGRL  247
             DELT  V+G WS S GA +LV WL G+LLSGMLTVIVGRAVFGS ITVGE W K+RGRL
Sbjct  164  SDELTAGVLGAWSVSVGAGVLVGWLGGMLLSGMLTVIVGRAVFGSSITVGETWTKIRGRL  223

Query  248  LALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLAYLYVVLL  307
             AL GLALLEA  V A+ GL VV+++ +AA  N AAA +LG PL+L V   L YLY V+L
Sbjct  224  PALLGLALLEAVVVAAIAGLVVVVIAILAAIGNAAAAVVLGIPLVLTVIAVLVYLYTVVL  283

Query  308  FAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIV  367
            FAPVLIVLERLP+++AITRSF LVR GFWRVLGIR L  LV  VV NA+A PF IVG++ 
Sbjct  284  FAPVLIVLERLPVLDAITRSFRLVRRGFWRVLGIRALAFLVTAVVANAVAVPFSIVGQVF  343

Query  368  TAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVLQTG  427
                +S G  T  L+   + ++G  IG+I+TAPF+AGV+VLLYTDRR+RAEAFDL     
Sbjct  344  Q--ISSSG--TAFLISTAILSVGAAIGEIITAPFNAGVIVLLYTDRRMRAEAFDL-----  394

Query  428  LEAGPAGGPAPVESTDNLWLTRP  450
            L++G A G     STDNLWLTRP
Sbjct  395  LQSGAAQGSYAAASTDNLWLTRP  417


>gi|336460864|gb|EGO39749.1| hypothetical protein MAPs_36870 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=386

 Score =  327 bits (837),  Expect = 4e-87, Method: Compositional matrix adjust.
 Identities = 205/355 (58%), Positives = 243/355 (69%), Gaps = 33/355 (9%)

Query  96   YPAAPPGCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATL  155
            Y    PG  P                         LRPLTL DIFNGAVGYIRANPKATL
Sbjct  64   YGVLKPGIIP-------------------------LRPLTLGDIFNGAVGYIRANPKATL  98

Query  156  GLTAMVVVTLQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGV  215
            GLTA+VV+ +QII+  A+ GP+ A+G       DELT  V+G WS S GA +LV WL G+
Sbjct  99   GLTAIVVIAMQIITKAAVLGPLAAYGRFTGDRSDELTAGVLGAWSVSVGAGVLVGWLGGM  158

Query  216  LLSGMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGV  275
            LLSGMLTVIVGRAVFGS IT+GE W K+RGRL AL GLALLEA  V A+ GL VV+++ +
Sbjct  159  LLSGMLTVIVGRAVFGSSITIGETWTKIRGRLPALLGLALLEAVVVAAIAGLVVVVIAIL  218

Query  276  AAAANEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGF  335
            A   N AAA +LG PL+L V   L YLY V+LFAPVLIVLERLP+++AITRSF LVR GF
Sbjct  219  ATIGNAAAAVVLGIPLVLTVIAVLVYLYTVVLFAPVLIVLERLPVLDAITRSFQLVRRGF  278

Query  336  WRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQ  395
            WRVLGIR L  LV  VV NA+A PF IVG++     +S G  T  L+   + ++G  IG+
Sbjct  279  WRVLGIRALAFLVTAVVANAVAVPFSIVGQVFQ--ISSSG--TAFLISTAILSVGAAIGE  334

Query  396  IVTAPFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRP  450
            I+TAPF+AGV+VLLYTDRR+RAEAFDLVLQ+    G A G     STD+LWLTRP
Sbjct  335  IITAPFNAGVIVLLYTDRRMRAEAFDLVLQS----GAAQGSYAAASTDSLWLTRP  385


>gi|296166774|ref|ZP_06849196.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897871|gb|EFG77455.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=310

 Score =  306 bits (783),  Expect = 7e-81, Method: Compositional matrix adjust.
 Identities = 193/317 (61%), Positives = 241/317 (77%), Gaps = 8/317 (2%)

Query  134  LTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDIVTGEPDELTG  193
            +TL DIFNGAVGY+RANP+ATLGLTA+VVV +QI++ VA+FGP+ A+G + T +  EL+ 
Sbjct  1    MTLGDIFNGAVGYVRANPRATLGLTAIVVVAIQIVTKVAVFGPLAAYGRLTTDQAKELSS  60

Query  194  AVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGL  253
             VVG W  S GA +LV+WL G+LLSGMLTVIVGRAVFG+PIT+GE WAK+RGRL+ L GL
Sbjct  61   GVVGAWLTSMGAGVLVAWLGGMLLSGMLTVIVGRAVFGTPITIGETWAKIRGRLVPLLGL  120

Query  254  ALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLI  313
            A+LE A +    GL  VI++ +AA  + AA  LLG PL L +   L YLY V+LFAPVLI
Sbjct  121  AVLEGAVLAVFAGLVAVIVAVLAAIGSAAAVVLLGLPLALAMLALLVYLYTVVLFAPVLI  180

Query  314  VLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTAS  373
            VLERLP+++AITRSF LVR+GFWRVLGIR+LT+LV  VV  A+A PF IV ++   VT S
Sbjct  181  VLERLPVLDAITRSFVLVRNGFWRVLGIRVLTLLVTSVVAAAVAVPFNIVSQVFL-VTPS  239

Query  374  DGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPA  433
              +    LV   ++++G  IG+I+TAPF+AGV+ LLYTDRR+RAEAFDLVLQTG      
Sbjct  240  TAAF---LVSTAVASVGAAIGEIITAPFNAGVITLLYTDRRMRAEAFDLVLQTGAAG---  293

Query  434  GGPAPVESTDNLWLTRP  450
             GP+   STDNLWLTRP
Sbjct  294  -GPSGAASTDNLWLTRP  309


>gi|126437789|ref|YP_001073480.1| hypothetical protein Mjls_5225 [Mycobacterium sp. JLS]
 gi|126237589|gb|ABO00990.1| putative conserved transmembrane protein [Mycobacterium sp. JLS]
Length=398

 Score =  297 bits (761),  Expect = 2e-78, Method: Compositional matrix adjust.
 Identities = 208/389 (54%), Positives = 248/389 (64%), Gaps = 16/389 (4%)

Query  62   GYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVAP  121
            GYPP P    GY PPGY     Y PPPGY    GYP  PPG                  P
Sbjct  23   GYPP-PGYQQGYPPPGY--QQGY-PPPGY--QHGYP--PPGYQHGYPPPGYPPQQGYAPP  74

Query  122  GAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLV-ALFGPMTAF  180
            G +KPG+IPLRPL LSDIFNGAV YIR NPKATLGLTA+VVV  Q+ISLV  + GP+ A 
Sbjct  75   GVIKPGVIPLRPLGLSDIFNGAVNYIRRNPKATLGLTAIVVVAAQLISLVLQILGPLIAT  134

Query  181  GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW  240
            GD+      E     V   S S  A  + + LA V+LSGMLTVIVGRAVFG+ IT+GEAW
Sbjct  135  GDLDPTLSGEAGAGDVAVLSGSSLAGSITTALASVVLSGMLTVIVGRAVFGADITIGEAW  194

Query  241  AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA  300
             +V+GRLLAL G   LEA  V+ ++ + VV +    A     AA L+G PL++   + + 
Sbjct  195  QRVKGRLLALLGFTALEAVAVLLLIVVVVVAIIAAEAIGGGVAAFLVGAPLVIAAFLLIV  254

Query  301  YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF  360
            Y+   L+F P LIVLERL IVEA  RSF LV+  FWRVLGI +L  L   V+  A+  PF
Sbjct  255  YVATSLVFTPALIVLERLGIVEAAGRSFTLVKRDFWRVLGIWILAALAAAVIAGAVGVPF  314

Query  361  MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF  420
             + G+++ A + SDG V   LVG  L A+G  IGQI+TAPFSAGV+VLLYTDRRIRAEAF
Sbjct  315  SLGGQLL-AGSGSDGGV---LVGLILIAVGAAIGQILTAPFSAGVIVLLYTDRRIRAEAF  370

Query  421  DLVLQTGLEAGPAGGPAPVESTDNLWLTR  449
            DLVL TG  AGP     P +STD+LWLTR
Sbjct  371  DLVLHTGAAAGPG---VPADSTDHLWLTR  396


>gi|108801820|ref|YP_642017.1| hypothetical protein Mmcs_4857 [Mycobacterium sp. MCS]
 gi|119870973|ref|YP_940925.1| hypothetical protein Mkms_4946 [Mycobacterium sp. KMS]
 gi|108772239|gb|ABG10961.1| putative conserved transmembrane protein [Mycobacterium sp. MCS]
 gi|119697062|gb|ABL94135.1| putative conserved transmembrane protein [Mycobacterium sp. KMS]
Length=398

 Score =  295 bits (756),  Expect = 8e-78, Method: Compositional matrix adjust.
 Identities = 207/389 (54%), Positives = 247/389 (64%), Gaps = 16/389 (4%)

Query  62   GYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVAP  121
            GYPP P    GY PPGY     Y PPPGY    GYP  PPG                  P
Sbjct  23   GYPP-PGYQQGYPPPGY--QQGY-PPPGY--QHGYP--PPGYQHGYPPPGYPPQQGYAPP  74

Query  122  GAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLV-ALFGPMTAF  180
              +KPG+IPLRPL LSDIFNGAV YIR NPKATLGLTA+VVV  Q+ISLV  + GP+ A 
Sbjct  75   DVIKPGVIPLRPLGLSDIFNGAVNYIRRNPKATLGLTAIVVVAAQLISLVLQILGPLIAT  134

Query  181  GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW  240
            GD+      E     V   S S  A  + + LA V+LSGMLTVIVGRAVFG+ IT+GEAW
Sbjct  135  GDLDPTLSGEAGAGDVAVLSGSSLAGSITTALASVVLSGMLTVIVGRAVFGADITIGEAW  194

Query  241  AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA  300
             +V+GRLLAL G   LEA  V+ ++ + VV +    A     AA L+G PL++   + + 
Sbjct  195  QRVKGRLLALLGFTALEAVAVLLLIVVVVVAIIAAEAIGGGVAAFLVGAPLVIAAFLLIV  254

Query  301  YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF  360
            Y+   L+F P LIVLERL IVEA  RSF LV+  FWRVLGI +L  L   V+  A+  PF
Sbjct  255  YVATSLVFTPALIVLERLGIVEAAGRSFTLVKRDFWRVLGIWILAALAAAVIAGAVGVPF  314

Query  361  MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF  420
             + G+++ A + SDG V   LVG  L A+G  IGQI+TAPFSAGV+VLLYTDRRIRAEAF
Sbjct  315  SLGGQLL-AGSGSDGGV---LVGLILIAVGAAIGQILTAPFSAGVIVLLYTDRRIRAEAF  370

Query  421  DLVLQTGLEAGPAGGPAPVESTDNLWLTR  449
            DLVL TG  AGP     P +STD+LWLTR
Sbjct  371  DLVLHTGAAAGPG---VPADSTDHLWLTR  396


>gi|254773420|ref|ZP_05214936.1| hypothetical protein MaviaA2_01906 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=389

 Score =  287 bits (734),  Expect = 3e-75, Method: Compositional matrix adjust.
 Identities = 188/350 (54%), Positives = 226/350 (65%), Gaps = 51/350 (14%)

Query  122  GAVKPGIIPLRPLTLSDIF---------------------NGAVGYIRANPKATLGLTAM  160
            G +KPGIIPLRPLTL DIF                                         
Sbjct  69   GVLKPGIIPLRPLTLGDIFNGAVGYIRANPKATLGLTAIV--------------------  108

Query  161  VVVTLQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGM  220
             V+ +QII+  A+ GP+ A+G       DELT  V+G WS S GA +LV WL G+LLSGM
Sbjct  109  -VIAMQIITKAAVLGPLAAYGRFTGDRSDELTAGVLGAWSVSVGAGVLVGWLGGMLLSGM  167

Query  221  LTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAAN  280
            LTVIVGRAVFGS IT+GE W K+RGRL AL GLALLEA GV A+ GL VV+++ +A   N
Sbjct  168  LTVIVGRAVFGSSITIGETWTKIRGRLPALLGLALLEAVGVAAIAGLVVVVIAILATIGN  227

Query  281  EAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLG  340
             AAA +LG PL+L V   L YLY V+LFAPVLIVLERLP+++AITRSF LVR GFWRVLG
Sbjct  228  AAAAVVLGIPLVLTVIAVLVYLYTVVLFAPVLIVLERLPVLDAITRSFRLVRRGFWRVLG  287

Query  341  IRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAP  400
            IR L  LV  VV NA+A PF IVG++     +S G  T  L+   + ++G  IG+I+TAP
Sbjct  288  IRALAFLVTAVVANAVAVPFSIVGQVFQ--ISSSG--TAFLISTAILSVGAAIGEIITAP  343

Query  401  FSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRP  450
            F+AGV+VLLYTDRR+RAEAFDL     L++G A G     STDNLWLTRP
Sbjct  344  FNAGVIVLLYTDRRMRAEAFDL-----LQSGAAQGSYAAASTDNLWLTRP  388


>gi|333992608|ref|YP_004525222.1| transmembrane protein [Mycobacterium sp. JDM601]
 gi|333488576|gb|AEF37968.1| transmembrane protein [Mycobacterium sp. JDM601]
Length=319

 Score =  278 bits (710),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 172/325 (53%), Positives = 215/325 (67%), Gaps = 10/325 (3%)

Query  128  IIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDIVTGE  187
            +IPLRPL+L+DI+NGAVGY+RANP   LGLTA+VVV  QIIS +AL G + A      G 
Sbjct  1    MIPLRPLSLTDIYNGAVGYVRANPTVVLGLTAIVVVVTQIISGIALAGLLKAVAPEHRGS  60

Query  188  PD-ELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAWAKVRGR  246
               E++G  V  W  +F  + LV+ L  ++L+GMLT +VGR+VFGSPITVGEAWA VR R
Sbjct  61   SAGEISGGDVVAWLIAFAGAGLVTALGTIVLTGMLTAVVGRSVFGSPITVGEAWAIVRTR  120

Query  247  LLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLAYLYVVL  306
              AL GL +L       + G AV ++     A    AA L+G PL+L +  +L Y Y V+
Sbjct  121  FAALIGLTVLVGLAAAVLCGFAVFVIVMAGGAGGSGAAVLVGLPLVLALIAALGYGYAVV  180

Query  307  LFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEI  366
             FAP +IVLER P+ EA+ RSF LVR+ FWRVLGI  LT L+  +V +A+A PF I+G  
Sbjct  181  AFAPTVIVLERQPVFEAMRRSFTLVRNSFWRVLGILALTALIASLVSSAVAFPFNIIG--  238

Query  367  VTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVLQT  426
              AVT    ++T        S IG TIGQI+  PF+AGV VLLYTDRRIRAEAFDLVL+T
Sbjct  239  -MAVTHGADALTTSAQLDVFSRIGATIGQIIVLPFTAGVAVLLYTDRRIRAEAFDLVLRT  297

Query  427  GLEAGP-AGGPAPVESTDNLWLTRP  450
            G+ +GP A G     STD LWLTRP
Sbjct  298  GVTSGPYAAG-----STDQLWLTRP  317


>gi|118468350|ref|YP_890435.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
 gi|118169637|gb|ABK70533.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
Length=357

 Score =  273 bits (698),  Expect = 5e-71, Method: Compositional matrix adjust.
 Identities = 194/348 (56%), Positives = 243/348 (70%), Gaps = 15/348 (4%)

Query  107  PGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQ  166
            PGY    G+G PV      PGI+ LRPL+LSDIFNGAV YIR NPKATLGLT +VVV  Q
Sbjct  22   PGYASAPGFGAPV------PGIVALRPLSLSDIFNGAVAYIRRNPKATLGLTTIVVVLAQ  75

Query  167  IISLVALFGPMTAFGDI---VTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTV  223
            +++L+   GP+ A G +   V GE    TGAV   +S +  A +LV+ LA VLL+GMLTV
Sbjct  76   LVTLLLQVGPLAAMGGLGSEVQGEAPS-TGAV-AMFSGATLAGVLVTQLASVLLTGMLTV  133

Query  224  IVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAA  283
            I+GR++FG  +T+G+AW ++RGRLLAL GL LLEA  ++AV+ + + +++   A     A
Sbjct  134  IIGRSIFGGTVTIGQAWERLRGRLLALIGLTLLEAVVLLAVVLVVIGLIAAAGAVGGAVA  193

Query  284  AALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRL  343
            A ++G PL+L   +   +   VLLFAPVLIVLERL +  AI RSFALV+ GFWRVLGI L
Sbjct  194  AFVMGVPLVLAAVLGALFGLTVLLFAPVLIVLERLDVFAAIARSFALVKTGFWRVLGIWL  253

Query  344  LTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSA  403
            L  LV  V+ +A+ APF IVG+++T   + DG V M +VG  L A+G TIGQIVTAPF+A
Sbjct  254  LASLVASVIASAVGAPFSIVGQLLT--MSPDG-VGMSIVGLVLVAVGGTIGQIVTAPFAA  310

Query  404  GVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF  451
            GV VLLYTDRRIRAEAFDLVL+TG    PA   AP ESTD LWL R F
Sbjct  311  GVDVLLYTDRRIRAEAFDLVLRTGAYT-PAPPAAPAESTDQLWLVRHF  357


>gi|342861948|ref|ZP_08718592.1| hypothetical protein MCOL_23775 [Mycobacterium colombiense CECT 
3035]
 gi|342130488|gb|EGT83797.1| hypothetical protein MCOL_23775 [Mycobacterium colombiense CECT 
3035]
Length=281

 Score =  266 bits (681),  Expect = 4e-69, Method: Compositional matrix adjust.
 Identities = 169/287 (59%), Positives = 210/287 (74%), Gaps = 8/287 (2%)

Query  165  LQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVI  224
            +QI++ VA FGP+ A   + + +P +L+  V+G WS S G  +LV WL G+LLSGMLTVI
Sbjct  3    MQIVTKVAFFGPLAAADRLASDQPGQLSSGVLGAWSVSVGGGILVGWLGGMLLSGMLTVI  62

Query  225  VGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAA  284
            VGRAVFGS IT+GE W+K+RGRLLAL GLALLEA  V A+ GL  VI+  +AA  +  AA
Sbjct  63   VGRAVFGSSITIGETWSKIRGRLLALLGLALLEAVVVAALAGLVAVIIGVLAAIGSAVAA  122

Query  285  ALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLL  344
             +LG PL+LVV   L +LY V+LFAPVLIVLERLP+++AI RSF LVR+GFWRVLGIR+L
Sbjct  123  VVLGIPLVLVVLALLVFLYTVVLFAPVLIVLERLPVMDAIARSFKLVRNGFWRVLGIRVL  182

Query  345  TVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAG  404
              LV  VV NA+A PF I G+    +T+S    T  LV   + ++G  IG+I+TAPF+AG
Sbjct  183  AFLVTSVVANAVAVPFSIAGQFFQ-ITSSG---TAFLVSTAVLSVGAAIGEIITAPFNAG  238

Query  405  VVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF  451
            V+VLLYTDRR+RAEAFDLVLQ+    G A GP    STDNLWLTRP 
Sbjct  239  VIVLLYTDRRMRAEAFDLVLQS----GAAQGPYAAASTDNLWLTRPL  281


>gi|145221932|ref|YP_001132610.1| hypothetical protein Mflv_1340 [Mycobacterium gilvum PYR-GCK]
 gi|145214418|gb|ABP43822.1| putative conserved transmembrane protein [Mycobacterium gilvum 
PYR-GCK]
Length=370

 Score =  258 bits (658),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 168/329 (52%), Positives = 215/329 (66%), Gaps = 11/329 (3%)

Query  124  VKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDI  183
            +KPG++PLRPLTLSDIFNGAV Y+RANPKATLGLT +VVV  QI+SLV    P T F D+
Sbjct  50   LKPGVVPLRPLTLSDIFNGAVAYVRANPKATLGLTTIVVVAAQILSLVLSLVPFT-FTDM  108

Query  184  VT---GEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW  240
            V    GE DE +  V+ GW AS  A  + + LA  +L+GMLTV++GR+VFG+ ITVGEAW
Sbjct  109  VADGLGE-DEASVQVIVGWVASSLAGGIATALAATVLAGMLTVVIGRSVFGAGITVGEAW  167

Query  241  AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA  300
             ++R R   L G  +L+    +  L L V I+    A      A  +  PL+L   ++  
Sbjct  168  KRLRPRFWPLIGFTVLKMLVFLVGLVLVVGIIGATGALTTGVVAFAVAIPLVLAAVLAAV  227

Query  301  YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF  360
            +L V+L FAPV+IVLER  IV A+ RSF L++  FWRV GI LL  +V   +  A++ PF
Sbjct  228  WLSVMLTFAPVIIVLERRDIVTAVKRSFTLIKADFWRVFGIWLLAAIVAQFIAGAVSIPF  287

Query  361  MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF  420
             + G+I  + +A+  S  +      L AIG  IGQI+T PF+AGV VL Y DRRIRAEAF
Sbjct  288  TLGGQIAFSASATTASAMLAF---ALFAIGGAIGQIITGPFTAGVSVLQYADRRIRAEAF  344

Query  421  DLVLQTGLEAGPAGGPAPVESTDNLWLTR  449
            DLVLQTG  AGP    AP +STD+LWLTR
Sbjct  345  DLVLQTGATAGP---YAPADSTDDLWLTR  370


>gi|120406399|ref|YP_956228.1| putative transmembrane protein [Mycobacterium vanbaalenii PYR-1]
 gi|119959217|gb|ABM16222.1| putative conserved transmembrane protein [Mycobacterium vanbaalenii 
PYR-1]
Length=384

 Score =  219 bits (557),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 162/381 (43%), Positives = 221/381 (59%), Gaps = 46/381 (12%)

Query  83   SYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNG  142
             Y  PPGY P  G P  PP  G PP                +KPG++PLRPLTLSDIFNG
Sbjct  36   QYWQPPGYAPGYGAPGYPPQFGLPP---------------VIKPGVVPLRPLTLSDIFNG  80

Query  143  AVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDIV-TGEPDELTGAVVGGWSA  201
            AV YIR NPKATLGLTA+VV+  QI++L+    P    G +  T + DE +  V+  W A
Sbjct  81   AVAYIRTNPKATLGLTAIVVIASQIVALLLSLWPFAFTGQVASTLDGDEASTEVLVSWMA  140

Query  202  SFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGV  261
            S  A+ + + L+  LLSG+LTV++GR+VFG+ IT+GEAW ++R RL AL G  +L+   +
Sbjct  141  SSLATAITTGLSTTLLSGLLTVVIGRSVFGADITIGEAWRRLRPRLWALIGFTVLKTLAL  200

Query  262  VAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIV  321
            +   G+ ++I+    A  +  AA L+  PL+L   ++  ++ V+L FAP +IVLER  IV
Sbjct  201  IVWFGVVLLIVVLAVAVIDGPAAFLIAAPLVLASILAAVWVSVMLTFAPAVIVLERRDIV  260

Query  322  EAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGE------------IVTA  369
             ++ RSFAL++  FWRV GI LL  +V   +  A++ PF I G+            +++ 
Sbjct  261  TSVKRSFALIKSDFWRVFGIWLLAAIVAQFIAGAVSIPFSIGGQAVLTASATTTAAMISM  320

Query  370  VTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVLQTGLE  429
            V  S G    +++    SA GVT+ Q                 RRIRAEAFDLVLQTG  
Sbjct  321  VLFSVGGAVGQIITGPFSA-GVTVLQYTD--------------RRIRAEAFDLVLQTGAA  365

Query  430  AGPAGGPAPVESTDNLWLTRP  450
            AGP    AP +STD+LWLT P
Sbjct  366  AGPQ---APADSTDDLWLTGP  383


>gi|315446331|ref|YP_004079210.1| hypothetical protein Mspyr1_48380 [Mycobacterium sp. Spyr1]
 gi|315264634|gb|ADU01376.1| hypothetical protein Mspyr1_48380 [Mycobacterium sp. Spyr1]
Length=370

 Score =  212 bits (539),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 158/352 (45%), Positives = 202/352 (58%), Gaps = 57/352 (16%)

Query  124  VKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDI  183
            +KPG++PLRPLTLSDIFNGAV Y+RANPKATLGLT +VVV  QI+SLV    P T F D+
Sbjct  50   LKPGVVPLRPLTLSDIFNGAVAYVRANPKATLGLTTIVVVAAQILSLVLSLVPFT-FTDM  108

Query  184  VT---GEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW  240
            V    GE DE +  V+ GW AS  A  + + LA  +L+GMLTV++GR+VFG+ ITVGEAW
Sbjct  109  VADGLGE-DEASVQVIVGWVASSLAGGIATALAATVLAGMLTVVIGRSVFGAGITVGEAW  167

Query  241  AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA  300
             ++R R   L G  +L+    +  L L V I+    A      A  +  PL+L   ++  
Sbjct  168  KRLRPRFWPLIGFTVLKMLVFLVGLVLVVGIIGATGALTTGVVAFAVAIPLVLAAVLAAV  227

Query  301  YLYVVLLFAPVLIVLERLPIVEAITRSF-----------------------ALVRHGFWR  337
            +L V+L FAPV+IVLER  IV A+ RSF                                
Sbjct  228  WLSVMLTFAPVIIVLERRDIVTAVKRSFTLIKADFWRVFGIWLLAAIVAQF---------  278

Query  338  VLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIV  397
                          +  A++ PF + G+I  + +A+  S  +      L AIG  IGQI+
Sbjct  279  --------------IAGAVSIPFTLGGQIAFSASATTASAMLAF---ALFAIGGAIGQII  321

Query  398  TAPFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTR  449
            T PF+AGV VL Y DRRIRAEAFDLVLQTG  AGP    AP +STD+LWLTR
Sbjct  322  TGPFTAGVSVLQYADRRIRAEAFDLVLQTGATAGP---YAPADSTDDLWLTR  370


>gi|169627496|ref|YP_001701145.1| hypothetical protein MAB_0392c [Mycobacterium abscessus ATCC 
19977]
 gi|169239463|emb|CAM60491.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=402

 Score =  203 bits (516),  Expect = 5e-50, Method: Compositional matrix adjust.
 Identities = 158/387 (41%), Positives = 209/387 (55%), Gaps = 38/387 (9%)

Query  72   GYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVAPGAVKPGIIPL  131
            GY PPG+   P   PPPGY      P+A P    P              P A+KPG+IPL
Sbjct  35   GYPPPGFAYQP---PPPGY-QN---PSAVPYWVTP-------------EPPALKPGVIPL  74

Query  132  RPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDIVTGEPDEL  191
            RPL LS ++NGA+  IRANPK TLGLTA+VV+  Q++    +FG   A    V       
Sbjct  75   RPLDLSSLYNGAIAAIRANPKTTLGLTAIVVIVSQLL----IFGIQAAPATAVLTGAASF  130

Query  192  TGAVVGGWSASFGASLL--------VSWLAGVLLSGMLTVIVGRAVFGSPITVGEAWAKV  243
                   + A+FG   +        V+ L  ++LSGMLTV +GR+VFG   T+ EAW + 
Sbjct  131  DKNTEDSFGAAFGLGYIGGQLIGAVVTSLVTIILSGMLTVTIGRSVFGERTTIKEAWQRA  190

Query  244  RGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLAYLY  303
            + R+ AL G+A++E      VLG  V ++ G+A     A A   G  L L   +   YL 
Sbjct  191  KPRIWALLGVAVVELVLFAVVLGFGVAVVVGLALTVGPAGAIPAGLLLALAYFLFYLYLI  250

Query  304  VVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIV  363
             V    P +++LE+  +  AI RS +LVR GFWR+LGI +LT  +VG V   I  PF++V
Sbjct  251  PVFSLVPSVLILEQQSVFGAIGRSVSLVRKGFWRLLGILVLTGFIVGFVSMIIGMPFILV  310

Query  364  GEIVTAVTASDGSV---TMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF  420
            GE V A   SD +     M L+ A L+A+G  I QI++ PF A V VLLYTD+R+R EA 
Sbjct  311  GE-VAAFAGSDPNNLGPKMLLIFA-LAAVGAVIAQIISLPFKAAVNVLLYTDQRMRTEAL  368

Query  421  DLVLQTGLEAGPAGGPAPVESTDNLWL  447
            DLVLQT        G  P    D+LWL
Sbjct  369  DLVLQTEARTRERLG-QPGIDPDSLWL  394


>gi|296139166|ref|YP_003646409.1| hypothetical protein Tpau_1442 [Tsukamurella paurometabola DSM 
20162]
 gi|296027300|gb|ADG78070.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 
20162]
Length=439

 Score =  199 bits (507),  Expect = 7e-49, Method: Compositional matrix adjust.
 Identities = 167/446 (38%), Positives = 231/446 (52%), Gaps = 44/446 (9%)

Query  10   PKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPP-PVAPGYAPAGYPPYPA  68
            P P          + +QDG          P +    GYP   P P  PGY  A Y     
Sbjct  8    PDPGRHEQTGSSNEVQQDGAQWPHH----PGAESHAGYPASGPVPPQPGYPHAEYR----  59

Query  69   TPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGP-PPGYGPPLGYGPPV----APGA  123
               GY P G+  P    P  G+G P GY A  P     PPGYG P GY P      AP A
Sbjct  60   ---GYLPQGFPNPSQGSPQSGHGAPSGYQAGYPQPRQVPPGYGQP-GYPPSYYGWGAPSA  115

Query  124  VKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDI  183
             +PG IPLRPL + +I+NGA   IRANP   +G TA++VV  Q+++ +A   P+TA   +
Sbjct  116  PEPGSIPLRPLNVGEIYNGAFAAIRANPGVMIGFTAIIVVVSQVLTFLAQI-PLTAV-SV  173

Query  184  VTGEPDELTGAVVGGWSASFGASL---LVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW  240
             TG  D+   A++    AS   SL   L++ LA  +L+GMLTV+V R+V G     G AW
Sbjct  174  DTGSDDD--SAILANSMASLAVSLGMSLITALATTILTGMLTVVVARSVLGDRTDAGSAW  231

Query  241  AKVRGRLLALFGLALLEA----AGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVG  296
              ++ RL  L GL +++        + ++ + V++L G     + AAAA+L    L++V 
Sbjct  232  RALKPRLWPLIGLVVIQGLIYLVPTMLLIAMLVLVLGG-----SWAAAAILAVLGLVLVF  286

Query  297  VSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAI  356
            V +  L      A   +VLE    ++++ R F L R G+WR+LGI +LT L+  +V   I
Sbjct  287  VVMLGLMPAFALATAAVVLEGRGPIDSLRRGFQLQRPGYWRLLGILVLTYLITSIVAGII  346

Query  357  AAPFMIVGEIVTAVTASDGSVT-MRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRI  415
            A PF  VG I +A   S  ++T   ++G  L+AI   IG I+T PF + V  LLYTD+R+
Sbjct  347  AIPFS-VGTIFSAGDGSLDNITGSSVLGLGLTAIAGVIGSIITMPFLSAVQTLLYTDQRM  405

Query  416  RAEAFDLVL--------QTGLEAGPA  433
            R E FDLVL        QTG+  GPA
Sbjct  406  RTERFDLVLQSASVHQTQTGIPIGPA  431


>gi|297562676|ref|YP_003681650.1| glycerophosphoryl diester phosphodiesterase, membrane domain-containing 
protein [Nocardiopsis dassonvillei subsp. dassonvillei 
DSM 43111]
 gi|296847124|gb|ADH69144.1| Glycerophosphoryl diester phosphodiesterase, membrane domain 
protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111]
Length=514

 Score =  189 bits (481),  Expect = 7e-46, Method: Compositional matrix adjust.
 Identities = 161/447 (37%), Positives = 218/447 (49%), Gaps = 63/447 (14%)

Query  44   PPGYP-VEPPPVAPGYAPAGYPPYPA-TPPGYGP-------------PGYGAPPSYGPPP  88
            P G P   PP   PGY   GY   P+   PGYG               GYG  P+YG  P
Sbjct  64   PQGQPNFAPPEQTPGYGQQGYGQTPSGQQPGYGQYGQHASGQQPSQGGGYGQQPAYGQQP  123

Query  89   GYG------------------PPLGYPAAPPGCGPPPGYGPPLGYG--PPVA-PGAVKPG  127
            GYG                  P  G     PG G P GYG   GYG  PP   P A+KPG
Sbjct  124  GYGQYGHGQQAQWQQSGHGQQPGYGQYGQQPGYGQP-GYGAQAGYGQQPPYGQPRALKPG  182

Query  128  IIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFG---DIV  184
            ++ LRP+TL DI NGA   IR NPK T+GL  +V+    I+S V   G M+ +G   D V
Sbjct  183  VVALRPMTLGDILNGAFSLIRNNPKTTVGLALVVMAVASIVSSVGFSGYMSGYGAFLDQV  242

Query  185  TGEPDELTGAV---VGGWS--ASFGASLLVSWLAGVLL-SGMLTVIVGRAVFGSPITVGE  238
              +P  +         GWS  A +G  LL    AG++L +G+LT +VG AV G  ++  E
Sbjct  243  MADPASIDPNDPFPFSGWSLVALYGGGLLTQ--AGIILVTGLLTAVVGMAVLGRKLSPSE  300

Query  239  AWAKVRGRLLALFGLALLEAAGV----VAVLGLAVVILSGVAAAANEAAAALLGFPLLLV  294
            AW  VR R+  + GLALL+   +    VAV    VV   GV  A  E+    +   +  +
Sbjct  301  AWTAVRSRIWTVVGLALLQLVTIFVLYVAVTVGIVVFFIGVFVAIAESQGVGVIVVIASM  360

Query  295  VGVS-----LAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVV  349
            +GV+     +A++Y+ + FA  + VLER+    A+TRS+ L +  +WR  GI LL  +++
Sbjct  361  LGVAGGVALVAWIYIRIYFAIPVAVLERVGAGTALTRSWRLTQGRWWRTFGISLLASILM  420

Query  350  GVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLL  409
             +V   ++ PF IV  + T +        +         +G  +   +TAPFS GV  LL
Sbjct  421  FLVQGLLSTPFSIVSVVPTFIAPGAAWAAVVAGAVIY--VGNVVVYAITAPFSVGVKTLL  478

Query  410  YTDRRIRAEAFDLVL----QTGLEAGP  432
            Y D R+R+E  DL L    Q G EAGP
Sbjct  479  YVDARMRSEGLDLKLHQVAQAGYEAGP  505


>gi|271962952|ref|YP_003337148.1| hypothetical protein Sros_1411 [Streptosporangium roseum DSM 
43021]
 gi|270506127|gb|ACZ84405.1| hypothetical protein Sros_1411 [Streptosporangium roseum DSM 
43021]
Length=428

 Score =  171 bits (432),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 147/410 (36%), Positives = 213/410 (52%), Gaps = 29/410 (7%)

Query  52   PPVAPGYAPAGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGP  111
            P   PG+A    PPY   P        G+P +        PP   P   P  G  P YG 
Sbjct  9    PDTPPGWASNQPPPYGDAP--------GSPWTAPGSGPGAPPPQPPPQQPHGGQAPPYGQ  60

Query  112  ---------PLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVV  162
                              P A++PGIIPLRPL + DI +GA+  IR+NPK  LGL+A+V 
Sbjct  61   PPPHRPGPYGPPPHGFPPPPAMRPGIIPLRPLGIGDILDGAIKLIRSNPKTILGLSAIVA  120

Query  163  VTLQIISLVALFGPMTAFGDIVTG--EPDELTGAVVGGWSASFGASLL---VSWLAGVLL  217
                + ++    G     GD+  G  +P  L      G+ A +G +L+   V ++A  LL
Sbjct  121  A---LGAIPVAIGQAVMIGDLGAGLDDPSVLEDPQDIGFLAQYGGTLISYAVQFVAVTLL  177

Query  218  SGMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAA  277
            +G+LT I+GRAVFG  ++VGEAW   R R+  LFGL  +    ++  + + + +++G+ A
Sbjct  178  TGVLTRILGRAVFGGKMSVGEAWQLTRNRVPTLFGLVAIGMLVMLIPMVVVIAVIAGLGA  237

Query  278  AANEAAAALLGFPLLLVVGVSLA-YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFW  336
            A  +  A  L   L ++  V+ A ++   L  A  + VLER  +++++ RS+ LV  GFW
Sbjct  238  AGADFGALFLVGALAILGFVAYALFITTRLALAASVAVLERRGVIDSLRRSWNLVGGGFW  297

Query  337  RVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQI  396
            R LGI LLT L+  +V   ++ PF I+  +V  +    GS   ++  A L A+G T+  +
Sbjct  298  RTLGILLLTQLITALVALVLSFPFTIMAFVVGMI--GKGSTGSQIGTAILIAVGGTVSAM  355

Query  397  VTAPFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLW  446
            +T PF AGV  LLY DRR+RAEAFDLVLQT        G     S D+LW
Sbjct  356  ITYPFQAGVNGLLYADRRMRAEAFDLVLQTAAIEQQRQGWVH-ASADDLW  404


>gi|154509503|ref|ZP_02045145.1| hypothetical protein ACTODO_02035 [Actinomyces odontolyticus 
ATCC 17982]
 gi|153799137|gb|EDN81557.1| hypothetical protein ACTODO_02035 [Actinomyces odontolyticus 
ATCC 17982]
Length=416

 Score =  154 bits (390),  Expect = 2e-35, Method: Compositional matrix adjust.
 Identities = 133/408 (33%), Positives = 195/408 (48%), Gaps = 37/408 (9%)

Query  49   VEPPPVAP--GYAPAGYPPYPATPPGYG-PPGYGAPPSY---GPPPGYGPPLGYPA-APP  101
              P P AP  G+ P      P    GYG   GYGA   Y    P  GYG   GY A   P
Sbjct  6    TSPDPSAPYQGWTPQPESGAPTPQQGYGAQQGYGAQQGYTAPQPAQGYGAQQGYAAPQAP  65

Query  102  GCGPPPGYGPPLGYGPPVAPGAV------------KPGIIPLRPLTLSDIFNGAVGYIRA  149
              G  P YG   GY     PGA             KPGIIPLRPLT+ D+F+GA   IR+
Sbjct  66   AYGAQPAYGAQPGYN--AQPGASGYSTTNRWGWQSKPGIIPLRPLTIGDLFSGAFEAIRS  123

Query  150  NPKATLGLTAMVVVTLQIISLVALFGPMTAFGDIVTG--EPDELTGAVVGGWSASF--GA  205
            NPK   G T ++++ + +I+ V++      +  +     +P  L  ++    +       
Sbjct  124  NPKVLFGFTVVIMLFVSLIASVSILLSGLGYESVANTDYDPQALHQSMTDQTNVLLLRMI  183

Query  206  SLLVSWLA----GVLLSGMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFG-LALLEAAG  260
            S +V W+A      +L+G+L   V +   G  +T+ EAWA  R RL +L G  AL     
Sbjct  184  SNMVQWIATFAGTTILTGLLASTVSQMTIGRNLTLSEAWAMTRKRLGSLLGSFALTAVIT  243

Query  261  VVAVLGLAVVILSGVAA--AANEA--AAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLE  316
             V ++   V + + +AA  + N+      L+ F  ++ + + + +  + LLFAP+  VLE
Sbjct  244  AVPIILWIVAVFASLAALMSGNDDLWWLVLVAFAAIIPIFILVYFFQIKLLFAPICAVLE  303

Query  317  RLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGS  376
             +  V ++ RS++LV+  FW  LG  LL  L V  +G  I     ++G +V+    SD S
Sbjct  304  EIGPVASLKRSWSLVKGEFWPTLGRFLLLNLAVSFIGGFIGFVIGLIGGLVSVAATSDPS  363

Query  377  VTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVL  424
                 VG+ ++   V +G  +  PFSA    L+YTD RIR E F  VL
Sbjct  364  SP---VGSAIAIFFVMLGSSLLLPFSASFETLMYTDLRIRKENFASVL  408


>gi|293189435|ref|ZP_06608155.1| putative membrane protein [Actinomyces odontolyticus F0309]
 gi|292821525|gb|EFF80464.1| putative membrane protein [Actinomyces odontolyticus F0309]
Length=431

 Score =  150 bits (378),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 134/425 (32%), Positives = 191/425 (45%), Gaps = 56/425 (13%)

Query  49   VEPPPVAP--GYAPAGYPPYPATPPGYG-PPGYGAPPSY---GPPPGYGPPLGYPAAPPG  102
              P P AP  G+ P      P    GYG  PGYGA   Y    P  GYG   GY A  P 
Sbjct  6    TSPDPSAPYQGWTPQPESGAPTPQQGYGAQPGYGAQQGYTAPQPTQGYGAQQGYTAPQP-  64

Query  103  CGPPPGYGPPLGYGPPVAPG------------------------------AVKPGIIPLR  132
                 GYG   GY  P AP                                 KPGIIPLR
Sbjct  65   ---TQGYGAQQGYAAPQAPAYGAQPAYGAQPGYNAQPGASGYSTTNRWGWQSKPGIIPLR  121

Query  133  PLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDIVTG--EPDE  190
            PLT+ D+F+GA   IR+NPK   G T ++++ + +I+ V++      +  +     +P  
Sbjct  122  PLTIGDLFSGAFEAIRSNPKVLFGFTVVIMLLVSLIASVSILLSGLGYESVANTDYDPQA  181

Query  191  LTGAVVGGWSASF--GASLLVSWLA----GVLLSGMLTVIVGRAVFGSPITVGEAWAKVR  244
            L  ++    +       S +V W+A      +L+G+L   V +   G  +T+ EAWA  R
Sbjct  182  LHQSMTDRTNVLLLRMISNMVQWIATFAGTTILTGLLASTVSQMTVGRNLTLSEAWAMTR  241

Query  245  GRLLALFGLALLEA--AGVVAVLGLAVVILSGVAAAANEAA---AALLGFPLLLVVGVSL  299
             RL +L G   L A   GV  +L +  V  S  A            L+ F  ++ + + +
Sbjct  242  KRLGSLLGSFALTAVITGVPIILWIVAVFASLAALMGGNDDLWWLVLVAFAAIIPIFILV  301

Query  300  AYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAP  359
             +  + LLFAP+  VLE +  V ++ RS++LV+  FW  LG  LL  L V  +G  I   
Sbjct  302  YFFQIKLLFAPICAVLEEIGPVASLKRSWSLVKGEFWPTLGRFLLLNLAVSFIGGFIGFV  361

Query  360  FMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEA  419
              ++G +V+    SD S     VG+ ++   V +G  +  PFSA    L+YTD RIR E 
Sbjct  362  IGLIGGLVSVAATSDPSSP---VGSAIAIFFVMLGSSLLLPFSASFETLMYTDLRIRKEN  418

Query  420  FDLVL  424
            F  VL
Sbjct  419  FASVL  423


>gi|269794262|ref|YP_003313717.1| hypothetical protein Sked_09330 [Sanguibacter keddieii DSM 10542]
 gi|269096447|gb|ACZ20883.1| hypothetical protein Sked_09330 [Sanguibacter keddieii DSM 10542]
Length=470

 Score =  147 bits (370),  Expect = 5e-33, Method: Compositional matrix adjust.
 Identities = 130/385 (34%), Positives = 191/385 (50%), Gaps = 35/385 (9%)

Query  56   PGYAPAGYPPYPATPPGYGPPGYGAPPSYGPPPGYG-PPLGYPAAPPGCGPPPGYGPPLG  114
            PG AP G  P   +    G P YG  P YG  P YG PP G PA   G  P PG+     
Sbjct  98   PGGAPYGGAPQYGSQQYGGAPQYGGAPQYGGAPQYGGPPQGGPAY--GGLPAPGW-----  150

Query  115  YGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQII-SLVAL  173
                  PG  KPGIIPLRPL+L +I++GA   IR NPK  LG+ A+V+    I+ +L+A 
Sbjct  151  -----RPGPAKPGIIPLRPLSLGEIYDGAFAAIRKNPKVMLGVVALVIAVATIVPALIAY  205

Query  174  F-----------GPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVS---WLAGVLLSG  219
                        G +T F    T +     G  + G +     +LL+S   +LA ++ +G
Sbjct  206  VLAPSANQWLDDGVVTVFDGSGTSQTSAELG--LDGIAGQLSQALLISLGVYLASIITTG  263

Query  220  MLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAA  279
            +L V + R+V G+  TV E WA+VR +++ L  ++LL + G+V V G  + I++ +AA  
Sbjct  264  LLIVAISRSVIGTSFTVSELWAQVRSKVVGLVVISLLPSVGIVLVAGAFIGIIAALAAGG  323

Query  280  NEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVL  339
                  L+    L+ V V   +L    L  P   VLE   +  +ITR + L R  FWR+ 
Sbjct  324  AVEGVLLVSVLALVAVVVVAVWLLTRFLLTPAAYVLEGQSLGRSITRGWLLSRGSFWRLF  383

Query  340  GIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTA  399
            GI LL+ ++  +V   +A+P    G +V  +    G  TM      ++ +   I   ++ 
Sbjct  384  GIYLLSSVLASIVSTLVASP----GSLVAGILFPSGD-TMHAGALAITVVTQIIASTIST  438

Query  400  PFSAGVVVLLYTDRRIRAEAFDLVL  424
             F + VV LLY D R+R E  D+ L
Sbjct  439  TFLSSVVALLYIDVRMRREGLDVEL  463


>gi|329944313|ref|ZP_08292572.1| hypothetical protein HMPREF9056_00449 [Actinomyces sp. oral taxon 
170 str. F0386]
 gi|328531043|gb|EGF57899.1| hypothetical protein HMPREF9056_00449 [Actinomyces sp. oral taxon 
170 str. F0386]
Length=438

 Score =  144 bits (363),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 130/406 (33%), Positives = 203/406 (50%), Gaps = 54/406 (13%)

Query  51   PPPVAPGYAPAGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYG  110
            PP  APGY    Y   P   PGYG  G      Y    GYG   GY + P   G P   G
Sbjct  51   PPQGAPGYGS--YQTPPVGQPGYGADGGQGYQGYTDSAGYGA--GYASYPGAAGYPGYGG  106

Query  111  PPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISL  170
             P    P       KP IIPLRPL++ +I  GA   +RANPKA   + ++ V+T  I+ L
Sbjct  107  NPSALAP-------KPSIIPLRPLSIGEILGGAFESLRANPKAMF-VPSLAVMT--IVGL  156

Query  171  VALFGPMTAFGDIVT-------GEPDELT-----GAVVGGWSASFGASLLVSWLAGVLLS  218
            ++  G + +   + T       G+P +        +++  ++ S  +S+L + LA  +L+
Sbjct  157  ISAAGSVYSLNRLGTTSLYSSSGQPSDADVQKQLSSLLELYAQSAISSIL-TMLASSILT  215

Query  219  GMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLA----LLEAAGVVAVLGLAVVIL--  272
            G+L V V R + G   ++G+ W + + R+ AL G A    L+ +A + A +G+ V ++  
Sbjct  216  GLLIVTVSRTILGRKASLGDVWQRTKPRVWALIGQAVIIQLILSAVMAAAIGIWVAVVFA  275

Query  273  ---------SGVAAAANEAAAALLG-FPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVE  322
                     S    AA     A LG F L+++VG+ +  LY  L  AP  ++LE + + E
Sbjct  276  LGVPGMVEGSSRQGAAATVLLAFLGLFILIVLVGLGVFALYCKLCLAPAALILENVGVFE  335

Query  323  AITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLV  382
             I+RS+ L R  FWR++GI+LL+V+++         P  ++  I+ A   S  ++T+   
Sbjct  336  GISRSWTLTRGNFWRIVGIQLLSVIIIVFATGIATTPVSLLAGILAATVPSVETLTL---  392

Query  383  GATLSAIGVTIGQIVTA---PFSAGVVVLLYTDRRIRAEAFDLVLQ  425
                 A  V +G IVTA   PF + V  L+YTD R+R+E  D+ L+
Sbjct  393  -----AFSVLLGTIVTAATLPFDSAVRALIYTDLRMRSEGLDVELR  433


>gi|227497999|ref|ZP_03928175.1| possible integral membrane protein [Actinomyces urogenitalis 
DSM 15434]
 gi|226832589|gb|EEH64972.1| possible integral membrane protein [Actinomyces urogenitalis 
DSM 15434]
Length=425

 Score =  142 bits (358),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 132/402 (33%), Positives = 184/402 (46%), Gaps = 42/402 (10%)

Query  60   PAGYPPYPATPPGYGPPGYGAPPSYG----PPPGYGPPLGYPAAPPGCGPPPGYGPPLG-  114
            P+  P  P+   G G       P +G     PPG      + +  PG  P  G   P   
Sbjct  26   PSWSPDQPSASLGAGTSAPSTQPRFGAYGATPPGQATSGSWQSGYPGYEPAQGQADPAQP  85

Query  115  YGPPVAPG-------AVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQI  167
            YG P + G       A KPGIIPLRPL++ +I +GA   +RANPKA      +V+  L +
Sbjct  86   YGAPGSSGVPGGFFLAPKPGIIPLRPLSIGEIISGAFESLRANPKAMFVPALIVMSVLGV  145

Query  168  ISLVALFGPMTAFGDIVTGEPDELTGAVVG---GWSAS----------FGASLLVSWLAG  214
            IS V  F        + T    +L   VVG     S S           GA+ L+  LA 
Sbjct  146  ISAVLSFTSSLGLDSLATSSTSDLESVVVGLDLTTSTSPASLLTTLLGSGATTLLMSLAS  205

Query  215  VLLSGMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVL----GLAVV  270
             +L+G+L V V R+V G   T GE W + R R+ AL G +LL +  V  VL    G+ V 
Sbjct  206  TVLTGLLIVAVSRSVLGRLATPGEVWQRTRSRVWALIGQSLLTSLIVYGVLAVGTGVTVA  265

Query  271  ILSGVAAAANEAAAALLG--FPLLLVV----GVSL-AYLYVVLLFAPVLIVLERLPIVEA  323
               G+        +ALL   F L +VV     V L A+L+V L  AP  +VLE + ++ A
Sbjct  266  ASVGMFTTFGSQRSALLTVVFALAIVVLALTTVCLTAFLWVRLSMAPAALVLENVGVLTA  325

Query  324  ITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVG  383
            ++RS+ L R GFWRV G+ +L  ++  V  + +     IV  IV  +  S   V+     
Sbjct  326  MSRSWELTRQGFWRVFGVLVLAAIISNVAVSVVGGVTGIVAGIVGTIIGSFALVSALSSL  385

Query  384  ATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVLQ  425
                   V +      PF+A V  L Y D R+R E  D+ L+
Sbjct  386  LGALLSAVIM------PFTAAVTALTYIDLRMRREGLDVELR  421


>gi|291439273|ref|ZP_06578663.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
 gi|291342168|gb|EFE69124.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length=448

 Score =  141 bits (355),  Expect = 3e-31, Method: Compositional matrix adjust.
 Identities = 113/314 (36%), Positives = 171/314 (55%), Gaps = 18/314 (5%)

Query  123  AVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGD  182
            A KPG+IPLRPL + +I +GAV  +R   +  LG++  V V  +I+ ++     +   G 
Sbjct  124  AAKPGVIPLRPLGVGEILDGAVSTMRTYWRTVLGISLTVAVLTEIVVVLLQGLVLDNTGT  183

Query  183  IVTGEPD----ELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGE  238
             V  +P     ELTGA+ G    + G   LV+ +  V  + +LT +  RAV G P+T GE
Sbjct  184  EVLNDPSATLSELTGAL-GDALLNSGVVFLVTLVGTVAATALLTTVTSRAVLGKPVTTGE  242

Query  239  AWAKVRGRLLALFGLALLE---AAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVV  295
            AW   R +++ LFGL  L     AG+V V  L  ++++   A A EA  AL    ++  V
Sbjct  243  AWRDARPQVVKLFGLICLLLLITAGIVTVGALPGLLVT--VAGAPEAGVALTALGIIGAV  300

Query  296  GVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNA  355
             V+L  +    L +P L+ LE+  IV+A++RS  LVR  +WR+ GI+LL  ++  VV + 
Sbjct  301  VVTLWLMIRFSLSSPALM-LEKQGIVKAMSRSAKLVRGSWWRIFGIQLLATIIANVVASI  359

Query  356  IAAPFMIVGEIVTA-----VTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLY  410
            I  PF+ +    +      + ++ G +    +   +S IG  IG +VT P +AGV  LLY
Sbjct  360  IVLPFVFLAATFSGGFTGFLDSTGGDIGWTFL--VISGIGSVIGAMVTFPITAGVTALLY  417

Query  411  TDRRIRAEAFDLVL  424
             D+RIR EA DL L
Sbjct  418  VDQRIRREALDLEL  431


>gi|345015648|ref|YP_004818002.1| integral membrane protein [Streptomyces violaceusniger Tu 4113]
 gi|344041997|gb|AEM87722.1| integral membrane protein [Streptomyces violaceusniger Tu 4113]
Length=422

 Score =  139 bits (349),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 145/422 (35%), Positives = 202/422 (48%), Gaps = 46/422 (10%)

Query  56   PGYAPAGYPPYPATPPGYGPPGYGAPPSYGPP--PGYGPPLGYPAAPPGCGPPPGYGPPL  113
            PG+AP G    P+  P  G      P     P  P +G        PPG    PG GP  
Sbjct  5    PGWAPPGS--SPSDEPDRGAQQQHEPADQPAPEQPTWGGQWARRQPPPGRWTAPGRGPTP  62

Query  114  -----------GYGP-PVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMV  161
                       G+G  P  P A +PG+IPLRPL +S+I NGAV  +RA+ +  LG++ +V
Sbjct  63   PQVPPAPAPGSGWGTGPRQPPAPRPGVIPLRPLAVSEILNGAVAIVRAHWRTVLGISLIV  122

Query  162  VVTLQIISLVA---LFGPMTAFGDIVTGEPDELTGAVVGGWSASFGAS---LLVSWLAGV  215
             + +Q +   A    F         V  +PD      +    AS G S   LL+  L  +
Sbjct  123  SIVIQGLITAATGLWFNHARGNESNVLDDPDATVSQAMRAVGASLGDSGVTLLLGVLGTI  182

Query  216  LLSGMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVL--GLAVVILS  273
            + + +LTV+  RAV G  ++  EAW   R  LL L GL LL     VAV+  G+   +L 
Sbjct  183  VTTALLTVVTARAVLGRSVSTKEAWGGARPHLLQLCGLLLLIPTIAVAVIAAGMTPGLLL  242

Query  274  GVAAAANEAA--AALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALV  331
              A   +E A  A+L GF      GV++ +L+V    AP  ++LE+  I++A+ RSF LV
Sbjct  243  AFAGVPSEGAALASLGGFA---AAGVAV-WLWVRFSLAPPALMLEKQGIIKALRRSFKLV  298

Query  332  RHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSA---  388
            R  + RV GI+LL V++V +VG  +  P  ++  ++    A D      L G ++SA   
Sbjct  299  RGAWGRVFGIQLLAVVLVFIVGAIVEIPTSLIAMVIGGDNAMD-----WLSGESVSAGWT  353

Query  389  ------IGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVEST  442
                  +G  I   +T P SAGV  LLY D+RIR EA DL L     AG  G PA     
Sbjct  354  FLVVVGVGGVISSTITFPISAGVTALLYMDQRIRREALDLELARA--AGMPGDPAEGHGK  411

Query  443  DN  444
            D 
Sbjct  412  DQ  413


>gi|317508341|ref|ZP_07966016.1| hypothetical protein HMPREF9336_02388 [Segniliparus rugosus ATCC 
BAA-974]
 gi|316253365|gb|EFV12760.1| hypothetical protein HMPREF9336_02388 [Segniliparus rugosus ATCC 
BAA-974]
Length=397

 Score =  138 bits (347),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 123/334 (37%), Positives = 177/334 (53%), Gaps = 31/334 (9%)

Query  125  KPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVV---VTLQIISLV-ALFGPMT--  178
            +PG IPLRPL+LS+I+NGAV  +R+NPKA LG + +V+     LQ+ +L  AL   +   
Sbjct  74   QPGAIPLRPLSLSEIYNGAVAVLRSNPKAVLGFSVVVLGFGALLQVAALAPALRWALRIA  133

Query  179  -AFGDIVT-GEPDEL-TGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPI-  234
             AFG  VT   PD   T + VG       A+  V+ +   L++G +  ++ RA+ G P+ 
Sbjct  134  GAFGSAVTPDSPDSRSTISFVGAL-----ANAPVTAITATLIAGCVMPVLARALAGDPVP  188

Query  235  ----TVGEAWAKVRGRLLALFGLALLE--AAGVVAVLGLAVVILSGVAAAA-NEAAAALL  287
                +    W + R R L L GLA L      ++ +L + + +   VAA      A  LL
Sbjct  189  GRRSSARAVWRETRARALPLAGLAFLVLFVQALIVLLPILIALFLVVAAGFPTPGAVVLL  248

Query  288  GF--PLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLT  345
             F  P+ L+V   L  L  + L AP ++  ERL +  A  RS  L R GFW++LG  LLT
Sbjct  249  IFAEPVFLLVAYVLGVL--LSLSAPAMMS-ERLGVFAACRRSVRLARRGFWKLLGFGLLT  305

Query  346  VLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGV  405
             LV  VVG +++ PF +VGE++ +     G     L    L  +G  + Q +  PF+A V
Sbjct  306  RLVTSVVGLSLSLPFTVVGEMLASDKTQAGHAA--LWSMVLLTLGQLLAQSILMPFTASV  363

Query  406  VVLLYTDRRIRAEAFDLVLQT--GLEAGPAGGPA  437
              LLY D+R+R EA+DLVL +  G E G  G  A
Sbjct  364  TALLYVDQRMRQEAYDLVLLSTVGREGGEIGREA  397


>gi|320533911|ref|ZP_08034488.1| hypothetical protein HMPREF9057_02383 [Actinomyces sp. oral taxon 
171 str. F0337]
 gi|320133875|gb|EFW26246.1| hypothetical protein HMPREF9057_02383 [Actinomyces sp. oral taxon 
171 str. F0337]
Length=446

 Score =  137 bits (345),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 136/442 (31%), Positives = 207/442 (47%), Gaps = 60/442 (13%)

Query  38   RPVSMLPPGYPVEPPPVAPGYAPAGYPPYPATPPGYGP-PGYGAPPSYGPP-----PGYG  91
             P ++ P G P    P  PG+  AG        P  G   G  + PS G       PGYG
Sbjct  6    HPDNVSPSGGPDRETPADPGHDVAGGGQDGWQAPDAGTFAGASSYPSQGSAQRSQYPGYG  65

Query  92   ----PPLGYPAAPPGC-GPPPGYGPPLGYGPPVAPG---------------AVKPGIIPL  131
                PP+G P  PP      PGYG   G G    PG               A KP IIPL
Sbjct  66   SYHTPPVGQPGYPPHSPSGQPGYGGASGPGYSPYPGAPGGQAGYGGYASVLAPKPSIIPL  125

Query  132  RPLTLSDIFNGAVGYIRANPKATL--GLTAMVVVTLQIISLVALF-------GPMTAFGD  182
            RPL++ +I  GA   +RANP+A     L  M +V L     + LF       G +   G+
Sbjct  126  RPLSIGEILGGAFESLRANPRAMFVPSLVVMSIVGLLSAGSLVLFLSRLDTPGVIAGSGE  185

Query  183  IVTGEP----DELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGE  238
            I   E     D+L  + VG + A  G ++++  +A  ++ G+L V V R + G   ++ +
Sbjct  186  ITEAEAQASLDQLGSSFVGLF-AQLGVTVVLGTMATSIIVGLLIVTVSRTILGRKASLSD  244

Query  239  AWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAA---------ANEAAAALLGF  289
             W + + R  AL G  LL    ++ V  + V I +G+  A         A+E +A ++  
Sbjct  245  VWQRTKPRAWALIGQTLLIQLILLVVTAVFVAIAAGIGWALLGNIITNGADEDSAGVIML  304

Query  290  PLLL------VVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRL  343
             +L+      V+G+SL  L   L  AP  +VLE + ++E I+RS+ L R  FWR++GIRL
Sbjct  305  AVLVILAVTAVLGLSLFALMCKLCLAPAALVLENIGVLEGISRSWTLTRGYFWRIVGIRL  364

Query  344  LTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSA  403
            L+ L+V V   A +    ++ + +    A D  + +      LS +  ++ Q    PF +
Sbjct  365  LSFLIVLVASQAASYGVSLITQGLV-YAAPDAVIVLM----ALSTLLNSLVQAAILPFDS  419

Query  404  GVVVLLYTDRRIRAEAFDLVLQ  425
             V+ L+YTD R+R+E  D+ L+
Sbjct  420  SVIALMYTDLRMRSEGLDVELR  441


>gi|29831604|ref|NP_826238.1| integral membrane protein [Streptomyces avermitilis MA-4680]
 gi|29608720|dbj|BAC72773.1| putative integral membrane protein [Streptomyces avermitilis 
MA-4680]
Length=449

 Score =  135 bits (339),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 113/333 (34%), Positives = 177/333 (54%), Gaps = 30/333 (9%)

Query  125  KPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQI--ISLVALFGPMTAFGD  182
            KPG+IPLRPL + +I +GAV  +R   +  LG++  V V  QI  I L  L    +A  D
Sbjct  122  KPGVIPLRPLGVGEILDGAVSTMRMYWRTVLGISLAVAVFTQILVILLQGLVLDDSAGTD  181

Query  183  IV---TGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEA  239
             +   +    EL+ A+ G    + G  LL++ L  ++ + +LT +  RAV G  +T  EA
Sbjct  182  TLNDPSATVSELSRAM-GEALLNSGVVLLITLLGTIVATALLTTVTSRAVLGKSVTTAEA  240

Query  240  WAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSG------VAAAANEAAAALLGFPLLL  293
            W   R +LL LFGL  L     + ++GLA++ +        V A A +A A+L    +L 
Sbjct  241  WRDARPQLLKLFGLTFL-----LPLIGLAIIAVGALPGVLVVLAGATDAGASL---AVLG  292

Query  294  VVGVSLAYLYVVLLFA---PVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVG  350
             +  ++  L+V++ F+   P L+ LER  I ++++RS  LVR  +WRV GI+LL  ++  
Sbjct  293  GLAAAVCALWVMIRFSLASPALM-LERQSIRKSMSRSAKLVRGSWWRVFGIQLLATIIAN  351

Query  351  VVGNAIAAPFMIV-----GEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGV  405
            +V + +  PF  +     G+ ++ +  S G+  +      +S +G  IG ++T P +AGV
Sbjct  352  IVASIVVIPFAFLAAALSGDGISGILTS-GTGGLGWTFLIVSGVGSVIGAMLTFPITAGV  410

Query  406  VVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAP  438
             VLLY D+RIR EA DL L         G  AP
Sbjct  411  TVLLYIDQRIRREALDLDLARAAGVQDYGSTAP  443


>gi|239988167|ref|ZP_04708831.1| putative integral membrane protein [Streptomyces roseosporus 
NRRL 11379]
Length=403

 Score =  133 bits (335),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 130/396 (33%), Positives = 194/396 (49%), Gaps = 43/396 (10%)

Query  55   APGYAPAGYP----PYPATPP-GYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGC----GP  105
            +PG AP+       P P+ P  G GP G  +P    PPPG   P   P + PG       
Sbjct  9    SPGSAPSDGKEKAIPRPSDPQDGSGPTGQWSPEQ--PPPGQWSPPSNPGSGPGTRPPAPG  66

Query  106  PPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTL  165
              G     G+  P  P A KPG+IPLRPL+L +I +G+V  +RA+ +  LG +  V V  
Sbjct  67   WGGGPQRQGWAGP--PPAAKPGVIPLRPLSLGEILDGSVSALRAHWRTALGFSLTVSVIT  124

Query  166  QIISLVA----LFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGML  221
            QI  ++     L  P +   +    E    T         S   + L+S +A +  + ++
Sbjct  125  QIAVILMQRYLLPEPTSIDPNATGAEALRQTADSARSTLISLAPASLLSMIATLFTASVV  184

Query  222  TVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAV---VILSGVAAA  278
            TVI+ R+V G P T+ ++WA+ R R+L L GL +L A  + A++ + +   ++L   A A
Sbjct  185  TVIISRSVLGRPTTLADSWAEARPRVLPLLGLTVLVAVIMAAIMAVGIGPGLLLGSEAGA  244

Query  279  ANEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRV  338
            A           ++L + VS A      L AP L+ LER  IV A+ RS  LVR  +WR 
Sbjct  245  ALAFLGFAAACVVMLWLNVSFA------LAAPALM-LERQSIVAALRRSAKLVRGAWWRT  297

Query  339  LGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIG------VT  392
             GI  LT L+  ++   ++ PF  +  +      +DG+    L G T  ++G        
Sbjct  298  FGILALTYLLTFLLTFLVSIPFTAIAVV------ADGTEVSDLFGGTAPSVGWPFLIVTG  351

Query  393  IGQIVTA----PFSAGVVVLLYTDRRIRAEAFDLVL  424
            IG+++ +    PF AGV+ LLY D+RIR EA DL L
Sbjct  352  IGEVIVSTLIYPFVAGVMALLYMDQRIRREALDLDL  387


>gi|297200107|ref|ZP_06917504.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
 gi|197715416|gb|EDY59450.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
Length=440

 Score =  133 bits (335),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 113/313 (37%), Positives = 164/313 (53%), Gaps = 19/313 (6%)

Query  125  KPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMV-VVTLQIISLVALFGPMTAFGDI  183
            KPG+IPLRPL + +I +GAV  +R   +  LG++  V VVT  ++ L+  F    + G  
Sbjct  117  KPGVIPLRPLGVGEILDGAVSTMRTYWRTVLGISLTVAVVTEVLVILLQGFVLNDSAGTE  176

Query  184  VTGEP----DELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEA  239
               +P    DELT A+ G          L+S +  V  + +LT +  RAV G P+T GEA
Sbjct  177  ALNDPSASADELTHAL-GETMLGTTVVFLISLIGTVAATALLTTVTSRAVLGRPVTTGEA  235

Query  240  WAKVR---GRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVG  296
            W   R    RL  L  L LL   GV+AV  L  ++++   +     A A+LG   +L  G
Sbjct  236  WRDARPQVPRLFGLIFLLLLITFGVLAVGALPGILVAAAGSNGGGLALAILG---ILGAG  292

Query  297  VSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAI  356
            V   +L +    A   ++LE+  IV++++RS  LVR  +WRVLGI+LL  ++  +V   +
Sbjct  293  VVALWLMIRFSLASPALMLEKQSIVKSMSRSTKLVRGSWWRVLGIQLLAGIIANIVAAIV  352

Query  357  AAPFMIV-----GEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYT  411
              PF  +     GE V       G +    +   +S IG  IG ++T P +AGV VLLY 
Sbjct  353  VLPFTFLAAALSGEGVGGFVNGTGDLGWTFL--IISGIGSVIGSMITFPITAGVTVLLYI  410

Query  412  DRRIRAEAFDLVL  424
            D+RIR EA DL L
Sbjct  411  DQRIRREALDLEL  423


>gi|21221458|ref|NP_627237.1| integral membrane protein [Streptomyces coelicolor A3(2)]
 gi|289771256|ref|ZP_06530634.1| integral membrane protein [Streptomyces lividans TK24]
 gi|7799210|emb|CAB90926.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
 gi|289701455|gb|EFD68884.1| integral membrane protein [Streptomyces lividans TK24]
Length=462

 Score =  133 bits (334),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 110/313 (36%), Positives = 159/313 (51%), Gaps = 16/313 (5%)

Query  123  AVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGD  182
            A KPG+IPLRPL + +I +GAV  +R   +  LG++  V +  ++I ++     +   G 
Sbjct  132  AAKPGVIPLRPLGVGEILDGAVSTMRTYWRTVLGISLTVAIFTEVIVVLLQGLVLDDTGS  191

Query  183  IVTGEPD----ELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGE  238
                +PD    EL G  +   + + G   L+S +  VL + +LT +  RAV G P+T GE
Sbjct  192  EALNDPDATLSEL-GDALAETTINSGVVFLISLIGTVLATALLTTVTSRAVLGRPVTTGE  250

Query  239  AWAKVRGRL--LALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAAL--LGFPLLLV  294
            AW   R ++  L    L LL     +   G+   +L   A A  EA  AL  LGF   L 
Sbjct  251  AWRDARPQVLKLFGLILLLLLIVAGLVTAGMTPGLLV-TATAGGEAGVALTALGF---LA  306

Query  295  VGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGN  354
             GV   +L V    A   ++LE+  I +A+ RS  LVR  +WRV GI+LL  ++  VV +
Sbjct  307  GGVVAVWLMVRFSLASPALMLEKQGIKKAMGRSVKLVRGSWWRVFGIQLLATVIANVVAS  366

Query  355  AIAAPFMIVGEIVTAVTAS---DGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYT  411
             I  PF  +   +         DG+  +      +S IG  IG ++T P +AGV VLLY 
Sbjct  367  IIVIPFAFLAATLGGDGVGGFLDGTGDLGWTFLVVSGIGSVIGSMITFPITAGVTVLLYI  426

Query  412  DRRIRAEAFDLVL  424
            D+RIR EA DL L
Sbjct  427  DQRIRREALDLEL  439


>gi|116671259|ref|YP_832192.1| integral membrane protein [Arthrobacter sp. FB24]
 gi|116611368|gb|ABK04092.1| integral membrane protein [Arthrobacter sp. FB24]
Length=479

 Score =  132 bits (332),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 111/379 (30%), Positives = 171/379 (46%), Gaps = 45/379 (11%)

Query  75   PPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPL  134
            PP + AP  + PPP   P    P  PP  G  PG+  P    PP      KPGI+PLRPL
Sbjct  3    PPAWDAPAQWTPPP-TAPSGQPPWGPPYAGAQPGHAQPAYVAPP------KPGIVPLRPL  55

Query  135  TLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDIVTGEPDELTGA  194
               +I +GA   IR NP A         +  Q ++        T  G++   E  E  G 
Sbjct  56   MFGEILDGAFQTIRRNPAAM----LGAAMLAQTLA--------TVVGEVFAAE-TESRGQ  102

Query  195  VVGGWSASFG----------------ASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGE  238
             +G W A                      LVS+   ++L G++ V V R+V        E
Sbjct  103  SLGLWLAGMAPPEMVNLGGGLLIGAALLGLVSFFISIVLQGVMVVPVARSVLNRRTGFKE  162

Query  239  AWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANE--AAAALLGFPLLLVVG  296
             W   R R+ AL  L  L+   ++A +  AVV++ G    A+   A +AL+  PL L   
Sbjct  163  MWTLSRSRIGALLALGGLQ---ILAGIAFAVVLVGGTFLLADSMGATSALIIVPLFLGGI  219

Query  297  VSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAI  356
             ++  + + L+  P  IV+E   +++ + RS+ L RH +WR+ GI L+  L++G++   +
Sbjct  220  ATILLVSIRLMVTPAAIVVEEQGVLDGLRRSWQLTRHNWWRIFGIVLVISLLIGIISQIV  279

Query  357  AAPF-MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTA---PFSAGVVVLLYTD  412
              P  +  G   + +    G    R++ A +    + +  ++ A    F   V+ LLY D
Sbjct  280  QIPIGLATGGFSSVIAPHGGDDGQRVLSAVVGIASIIVTAVIGAVGYAFQTSVMGLLYMD  339

Query  413  RRIRAEAFDLVLQTGLEAG  431
             R+R E  DL LQ  LE+G
Sbjct  340  LRMRKEGLDLALQRQLESG  358


>gi|291445151|ref|ZP_06584541.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
 gi|291348098|gb|EFE75002.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
Length=397

 Score =  132 bits (331),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 126/382 (33%), Positives = 188/382 (50%), Gaps = 39/382 (10%)

Query  65   PYPATPP-GYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGC----GPPPGYGPPLGYGPPV  119
            P P+ P  G GP G  +P    PPPG   P   P + PG         G     G+  P 
Sbjct  17   PRPSDPQDGSGPTGQWSPEQ--PPPGQWSPPSNPGSGPGTRPPAPGWGGGPQRQGWAGP-  73

Query  120  APGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVA----LFG  175
             P A KPG+IPLRPL+L +I +G+V  +RA+ +  LG +  V V  QI  ++     L  
Sbjct  74   -PPAAKPGVIPLRPLSLGEILDGSVSALRAHWRTALGFSLTVSVITQIAVILMQRYLLPE  132

Query  176  PMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPIT  235
            P +   +    E    T         S   + L+S +A +  + ++TVI+ R+V G P T
Sbjct  133  PTSIDPNATGAEALRQTADSARSTLISLAPASLLSMIATLFTASVVTVIISRSVLGRPTT  192

Query  236  VGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAV---VILSGVAAAANEAAAALLGFPLL  292
            + ++WA+ R R+L L GL +L A  + A++ + +   ++L   A AA           ++
Sbjct  193  LADSWAEARPRVLPLLGLTVLVAVIMAAIMAVGIGPGLLLGSEAGAALAFLGFAAACVVM  252

Query  293  LVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVV  352
            L + VS A      L AP L+ LER  IV A+ RS  LVR  +WR  GI  LT L+  ++
Sbjct  253  LWLNVSFA------LAAPALM-LERQSIVAALRRSAKLVRGAWWRTFGILALTYLLTFLL  305

Query  353  GNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIG------VTIGQIVTA----PFS  402
               ++ PF  +  +      +DG+    L G T  ++G        IG+++ +    PF 
Sbjct  306  TFLVSIPFTAIAVV------ADGTEVSDLFGGTAPSVGWPFLIVTGIGEVIVSTLIYPFV  359

Query  403  AGVVVLLYTDRRIRAEAFDLVL  424
            AGV+ LLY D+RIR EA DL L
Sbjct  360  AGVMALLYMDQRIRREALDLDL  381


>gi|318081807|ref|ZP_07989116.1| integral membrane protein [Streptomyces sp. SA3_actF]
Length=294

 Score =  131 bits (330),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 110/311 (36%), Positives = 159/311 (52%), Gaps = 25/311 (8%)

Query  116  GPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFG  175
            GPP+AP   +PGIIPLRPL L DI  GA   +R++ +A LG++    V +  ++L     
Sbjct  2    GPPLAP---RPGIIPLRPLDLGDILGGAFHMMRSHWRAVLGISLGTAVLVTGVTLAV---  55

Query  176  PMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPIT  235
                         + ++ A  G +  S   + LVS L   L  GMLT +   AV G P++
Sbjct  56   ------------RETMSDATTGTYGLSSLPAQLVSLLGSTLAVGMLTSVASHAVLGRPLS  103

Query  236  VGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLL-LV  294
            +  AW + R R   L GL +L     VA++  A V++  +      AA    G  +L ++
Sbjct  104  LKGAWREARPRFRKLLGLTVL-----VALVMAAAVLVCLIPGLLVNAAGGGDGLTILGVI  158

Query  295  VGVSLA-YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVG  353
             GV LA +LY+ L F+   +VLER  IV+A+ RS  LV   +WR  GI LLT ++  V  
Sbjct  159  AGVVLAVWLYIRLSFSTAALVLERQGIVDAMRRSAKLVDGAWWRTFGILLLTGVIASVAQ  218

Query  354  NAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDR  413
              IA PF ++G +V    +   S T  L  +    +G+        P +AGV VLLY D+
Sbjct  219  FVIALPFDVLGLLVGFTDSEGSSSTGGLAFSLFVGVGMIASTTFAFPLTAGVTVLLYIDQ  278

Query  414  RIRAEAFDLVL  424
            RIR E+ DL L
Sbjct  279  RIRRESLDLDL  289


>gi|269957299|ref|YP_003327088.1| hypothetical protein Xcel_2515 [Xylanimonas cellulosilytica DSM 
15894]
 gi|269305980|gb|ACZ31530.1| hypothetical protein Xcel_2515 [Xylanimonas cellulosilytica DSM 
15894]
Length=422

 Score =  129 bits (325),  Expect = 9e-28, Method: Compositional matrix adjust.
 Identities = 113/338 (34%), Positives = 173/338 (52%), Gaps = 23/338 (6%)

Query  105  PPPGYGPPLGY--GPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVV  162
            P P    P G+  G P    A KPGI+PLRPLTL +I++GA G +R NP   LGL  +V+
Sbjct  81   PAPQQQTPYGWPAGSPYQSAATKPGIVPLRPLTLGEIYDGAFGAVRHNPAVMLGLATLVL  140

Query  163  VTLQII----------SLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASL---LV  209
            +   ++          +  +LFGP+  F D    E  E  G   G  +  +GA+    L 
Sbjct  141  LIATVVGVLVGQLLVPAFTSLFGPI--FDDPAFQESGESLGITAGSIAQLYGAASGMGLT  198

Query  210  SWLAGVLLSGMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEA-AGVVAVLGLA  268
            + LAG +++G+LTV V ++V G  + V + W +V  R   L G +LL+  A +V  +GL 
Sbjct  199  TLLAGPIVNGILTVSVSQSVLGDKVPVRQVWERVAPRAWLLVGWSLLQGFALIVLAVGLV  258

Query  269  VVILSGVAAAANEAAAALLGFPLLLVVGV--SLAYLYVVLLFAPVLIVLERLPIVEAITR  326
            +++   V A +  +  A     ++L +G    LA+L + LL  P  + LE   +   + R
Sbjct  259  ILVSVAVVAVSQVSGGAAGALAIVLAIGSVGVLAWLAIRLLLVPPALALEGARLWATVRR  318

Query  327  SFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATL  386
            ++ L R  FWR LGI LL  ++VGV+   ++ P   +G  + A T    +VT  L+   +
Sbjct  319  AWLLTRGSFWRTLGIYLLASVIVGVISQVVSVPLTFIGGAL-AGTGDPATVTGTLI--IV  375

Query  387  SAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVL  424
            S I   +   +   F AGV  LLY D R+R E  D+ L
Sbjct  376  SIIAGVVAAAIQTIFLAGVTALLYIDLRMRREGLDVQL  413


>gi|317123407|ref|YP_004097519.1| hypothetical protein Intca_0235 [Intrasporangium calvum DSM 43043]
 gi|315587495|gb|ADU46792.1| hypothetical protein Intca_0235 [Intrasporangium calvum DSM 43043]
Length=374

 Score =  128 bits (322),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 106/319 (34%), Positives = 163/319 (52%), Gaps = 14/319 (4%)

Query  125  KPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISL---VALFGPMTAFG  181
            +PGIIPLRPLTL +I++G    +R NP ATLGL  +      + +    + L G      
Sbjct  61   RPGIIPLRPLTLGEIWSGVFATVRGNPGATLGLALLTTALALVPATALAIWLAGQDLGLA  120

Query  182  DIVTGEPDELTGAVVGGWSASFGASL---LVSWLAGVLLSGMLTVIVGRAVFGSPITVGE  238
             +++ +P        G +S +  AS    L  W+  +LL   + +++G A+ G  +T+G+
Sbjct  121  AVLSADPFGDPNLSAGAYSDATLASYVPGLAMWVVSLLLPLFVALVIGHAIQGRKVTLGQ  180

Query  239  AWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVS  298
             W + RGR+L   G  LL  A    V  + VV+L+     A+   A  +   +LLVVG +
Sbjct  181  TWQQTRGRILPAIGTTLLIVAMFAGV--IVVVLLAAAGTWASGDGAGSVALTVLLVVGFA  238

Query  299  LA--YLYVVLLFAPVLIVLERLPIVEAITRSFALV-RHGFWRVLGIRLLTVLVVGVVGNA  355
             A  YL+V + FA  ++VLE      A+ RS+ L     FWR+ GIRLLT +V  +VG+ 
Sbjct  239  AAAVYLWVKVSFAVTIVVLESAGPRRAVRRSWGLTGGRPFWRIFGIRLLTAIVASIVGSI  298

Query  356  IAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRI  415
            +A P   +G I         + +M  V     A+ + +  ++  PF +GV  LLY D+RI
Sbjct  299  VATP---IGLIALFAADDPDATSMAWVLPLTQAVSLLVQGVLVTPFVSGVDSLLYVDQRI  355

Query  416  RAEAFDLVLQTGLEAGPAG  434
            R E  D+ L   L   P+G
Sbjct  356  RREGLDVQLMQQLPTSPSG  374


>gi|343523441|ref|ZP_08760402.1| putative membrane protein [Actinomyces sp. oral taxon 175 str. 
F0384]
 gi|343399658|gb|EGV12179.1| putative membrane protein [Actinomyces sp. oral taxon 175 str. 
F0384]
Length=439

 Score =  128 bits (322),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 126/395 (32%), Positives = 194/395 (50%), Gaps = 48/395 (12%)

Query  71   PGYGPPGYGAPPSYGPPPGYG----PPLGYPAAPPGCGP-------------PPGYGPPL  113
            P Y  PG  A P Y   PGYG    PP+G P  P G  P              PG     
Sbjct  48   PSYPAPGSAAGPQY---PGYGGYQTPPVGQPGYPGGSVPGSAPYPGAPGYPGAPGGPGYP  104

Query  114  GYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATL--GLTAMVVVTLQIISLV  171
            GYG   +  A KP IIPLRPL++ +I  GA   +RANPKA     L  M +  L     V
Sbjct  105  GYGGYTSALAPKPSIIPLRPLSIGEILGGAFESLRANPKAMFIPSLVVMGITGLLSAGSV  164

Query  172  ALFGPMTAFGDIVTGEPD------ELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIV  225
            ALF       D+ +G+ +      +  G+ + G     G + ++S +A  ++ G+L V V
Sbjct  165  ALFMSRLGLTDLTSGKVEFSETDLDSIGSSLVGLLVQLGVTSVLSMMATSIIIGLLIVTV  224

Query  226  GRAVFGSPITVGEAWAKVRGRLLALFG--------LALLEAAGVVAVLGLAVVILSGV-A  276
             R + G   ++G+ W + R R+ AL G        LA++ A  V   +G+   +L  V A
Sbjct  225  SRTILGRKASLGDVWQRTRPRVWALIGQTLLIELILAVITAVFVAVAIGIGWALLGNVIA  284

Query  277  AAANEAAAALLGFPLLLVVGV------SLAYLYVVLLFAPVLIVLERLPIVEAITRSFAL  330
              A+E +A       L+++ +      ++  L   L  AP  +VLE + ++E I+RS+ L
Sbjct  285  NGASEDSAGTFVVVFLVLLALLIVLGLAVFALMCKLCLAPAALVLENIGVMEGISRSWTL  344

Query  331  VRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIG  390
             R  FWR++GIRLL+ ++V      ++    IV + +  V A D ++ + LV +TL +  
Sbjct  345  TRGYFWRIVGIRLLSFIIVFFATQIVSQGVSIVMQGLVYV-APDMTLAI-LVASTLLS--  400

Query  391  VTIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVLQ  425
             ++ Q    PF + VV L+YTD R+R+E  D+ L+
Sbjct  401  -SLIQAAILPFDSAVVALMYTDLRMRSEGLDVELR  434


>gi|158317587|ref|YP_001510095.1| hypothetical protein Franean1_5843 [Frankia sp. EAN1pec]
 gi|158112992|gb|ABW15189.1| putative integral membrane protein [Frankia sp. EAN1pec]
Length=394

 Score =  128 bits (322),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 131/382 (35%), Positives = 179/382 (47%), Gaps = 74/382 (19%)

Query  66   YPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGC-----------------GPPPG  108
            +PA P G+  PG  + PS  P PG G P GY    P                   GP  G
Sbjct  53   WPA-PGGWQAPG--SDPSAAPVPGQGAPPGYVPNSPNSGYGPGGYGPHGGYGQQPGPARG  109

Query  109  YGP--PLGYG-PPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTL  165
            YG   P G+G PP+AP   KPG+IPLRPL + +I +G    IR+NP ATLGLT      +
Sbjct  110  YGAWGPNGWGGPPIAP---KPGVIPLRPLAVGEILDGTFATIRSNPGATLGLTLGATAVV  166

Query  166  QIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIV  225
            + IS VA      A  ++       LT  + G       A+L      G+ LSG+L V+V
Sbjct  167  ETISTVAAI----AAEEMSNTAATVLTLLLFG-----LNAAL------GIFLSGVLAVVV  211

Query  226  GRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAA  285
              A  G  IT G+A  +V  RL  L             +L LAV +LS +   A      
Sbjct  212  SEATLGGRITAGDAVRRVTPRLGGLL------------MLTLAVTLLSALGLVA------  253

Query  286  LLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLT  345
                   L+VG  +  +Y+ L  A    VLE     +A+ RS+ LV+  +WR LG+ LL+
Sbjct  254  -------LIVGAVVVAVYLSL--ATPAYVLEAQSTGDALRRSWRLVKGSWWRTLGVLLLS  304

Query  346  VLVVGVVGNAIAAPFMIVGEIVTAVTASDGSV---TMRLVGATLSAIGVTIGQIVTAPFS  402
              V GV+    A P  +   I+ +   + GS+    + + G  ++AIG  +   V  P  
Sbjct  305  AAVGGVLMLIFAIPTSV---ILMSSEQTFGSLVEGDLTVAGHIVNAIGSLLATTVATPVL  361

Query  403  AGVVVLLYTDRRIRAEAFDLVL  424
            +G VVLLY DRRIR E  D+ L
Sbjct  362  SGAVVLLYIDRRIRREGLDVTL  383


>gi|290959915|ref|YP_003491097.1| protein [Streptomyces scabiei 87.22]
 gi|260649441|emb|CBG72556.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length=444

 Score =  127 bits (319),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 118/328 (36%), Positives = 165/328 (51%), Gaps = 17/328 (5%)

Query  123  AVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQI--ISLVALFGPMTAF  180
            A KPG+IPLRPL + +I +GAV  +R + +  LG++  V V  QI  I L       TA 
Sbjct  116  AAKPGVIPLRPLGIGEILDGAVSTMRTHWRTVLGISLAVAVVTQIGVILLQGFVLDDTAS  175

Query  181  GDIV---TGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVG  237
             D +   T  P EL G  +     S    +++S L  ++ + +LT +  RAV G  +T  
Sbjct  176  ADALNDPTTTPGEL-GRALRDTLLSTSVVMVISLLGTIIATALLTTVTSRAVLGRSVTTA  234

Query  238  EAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGV--AAAANEAAAALLGFPLLLVV  295
            EAW   R +LL L GL +L     V V+  AV +L GV  A   +  A  LL     L  
Sbjct  235  EAWRDARPQLLRLAGLTVLLLVIAVLVM--AVGVLPGVLLATGGSTGAGVLLALLGGLGA  292

Query  296  GVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNA  355
             V   +L +    A   ++LE+  + +++ RS  LVR  +WRVLGI+LL  ++  +V + 
Sbjct  293  FVLTVWLMIRFSLASPALMLEKQGVRKSLGRSGKLVRGSWWRVLGIQLLAAIIAYIVASI  352

Query  356  IAAPFMIVGEIVTAVTAS----DGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYT  411
            +  PF   G  +     S     G  T+      +S +G  IG  +T P SAGV VLLY 
Sbjct  353  VVIPFSFAGAALDGDGISGLLATGGTTLGWTYLVISGVGAVIGSTLTFPISAGVTVLLYI  412

Query  412  DRRIRAEAFDLVLQTGLEAGPAG-GPAP  438
            D+RIR EA DL L  G  AG  G G AP
Sbjct  413  DQRIRREALDLEL--GRAAGLQGYGDAP  438


>gi|291453739|ref|ZP_06593129.1| integral membrane protein [Streptomyces albus J1074]
 gi|291356688|gb|EFE83590.1| integral membrane protein [Streptomyces albus J1074]
Length=426

 Score =  127 bits (319),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 128/403 (32%), Positives = 191/403 (48%), Gaps = 32/403 (7%)

Query  68   ATPPGYGPPGYGAPPSY----GPPPGYGPPLGYPA-------------APPGCGPPPGYG  110
            ATP G    G GA PS      PPPG     G                A  G   PP  G
Sbjct  25   ATPEGAEGTGPGASPSKWSKEQPPPGQWSAPGTTGSGAGDSGGGRRTRAESGDRTPPSGG  84

Query  111  PPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISL  170
               G G    P A KPG+IPLRPL + +I +GAV  +R + +  LG++ M+ V  Q++ +
Sbjct  85   GWGGGGWTQPPAAAKPGVIPLRPLGVGEILDGAVATLRTHWRTVLGISLMIAVATQVVLI  144

Query  171  VALFGPMTAFGDIVTGEP-----DELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIV  225
            +     +    D+   E      DEL  A+ G    S    L+   L  ++ + +LT++ 
Sbjct  145  LLQRFVLRDSVDVAALEDPSATTDELLSAMRGALLDSGLVLLVSL-LGTIVATALLTMVT  203

Query  226  GRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVV--ILSGVAAAANEAA  283
             RAV G P+++ +AW   R +L  L GL LL     + V+ +A+V  +L G+ + +  AA
Sbjct  204  SRAVLGKPVSLSDAWRDARPQLARLAGLTLLLPLIAIGVVTVAMVPGVLLGMVSGSEGAA  263

Query  284  AALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRL  343
            A L      L       +L +    +   ++LE+  +V+A+ RS  LVR  +WRV GI+L
Sbjct  264  ALL--ALGALGGAGVAVWLTIRFSLSSAALMLEKQGVVKAMRRSAKLVRGSWWRVFGIQL  321

Query  344  LTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVG-----ATLSAIGVTIGQIVT  398
            L  L+V +V + I  PF  V  ++T  + +     M +         ++ +G  IG ++T
Sbjct  322  LAQLLVMIVSSVILLPFSRVAAVITGESGASALDEMVVTNFGWTYLIITGVGSVIGAMLT  381

Query  399  APFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVES  441
             P  AGV VLLY D+RIR EA D+ L     A     P P  S
Sbjct  382  LPIVAGVTVLLYIDQRIRREALDVELTRAAAAQSQESPPPSAS  424


>gi|302544905|ref|ZP_07297247.1| putative membrane protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302462523|gb|EFL25616.1| putative membrane protein [Streptomyces himastatinicus ATCC 53653]
Length=348

 Score =  127 bits (319),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 120/340 (36%), Positives = 177/340 (53%), Gaps = 16/340 (4%)

Query  103  CGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVV  162
             GP  G G   G+  P  P A +PG+IPLRPL +S+I +GAV  +R + +  +G++  V 
Sbjct  13   AGPANGGGWGTGWRQP--PPAPRPGVIPLRPLAVSEILDGAVATMRTHWRTVIGISLAVS  70

Query  163  VTLQ-IISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGAS---LLVSWLAGVLLS  218
            V  Q +I++V      T  G      PD   G  +     + G+S   +LV  L  ++ +
Sbjct  71   VVAQGLITVVTGLWFRTTSGTGTVDNPDPTLGEALETVRNALGSSSVTMLVGVLGTIVTT  130

Query  219  GMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAV---VILSGV  275
             +LT++  RAV G P++ GEAW   R RLL L GL LL  A   AV+GL +   ++L+ V
Sbjct  131  ALLTMVTARAVLGRPVSTGEAWGGARPRLLQLCGLLLLIPAIAAAVIGLGMAPGMLLAAV  190

Query  276  AAAANEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGF  335
               +  AA A      L   GV++ +L+V    A   ++LE+  I+ A+ RS  LVR  +
Sbjct  191  GVGSEGAALAS--LGALAGTGVAI-WLWVRFSLAAPALMLEKQGIISALRRSAKLVRGAW  247

Query  336  WRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASD----GSVTMRLVGATLSAIGV  391
            WRV GI+LL++++V +V   +  P   V       +A D     SV++      +  IG 
Sbjct  248  WRVFGIQLLSIVLVFIVAAIVEVPTSAVAMAFGGDSAIDYLSGESVSVGWAFLIVVGIGG  307

Query  392  TIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAG  431
             I   +T P SAGV  LLY D+RIR EA DL L    + G
Sbjct  308  VISSAITFPISAGVTALLYMDQRIRREALDLELARAADCG  347


>gi|119718127|ref|YP_925092.1| hypothetical protein Noca_3907 [Nocardioides sp. JS614]
 gi|119538788|gb|ABL83405.1| conserved hypothetical protein [Nocardioides sp. JS614]
Length=362

 Score =  125 bits (313),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 114/327 (35%), Positives = 170/327 (52%), Gaps = 26/327 (7%)

Query  116  GPPVAPG----AVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLV  171
             P VAPG    A KPG +PLRPL L D+++ A   IR NPKAT+G +A++V  + +   V
Sbjct  39   SPVVAPGMLGAAHKPGAMPLRPLALGDMYDAAFRIIRFNPKATVG-SAVLVAAVAMGVPV  97

Query  172  ALFGPMTAFGDIVTGEP-DELTGAVVGGWSASFGASLLVSWLAGV---LLSGMLTVIVGR  227
             +   +T   D+   +  D+L+ A V G++ S G+  L + L  V   L++GM+  +   
Sbjct  98   LVTALLTLVVDLSAAQSGDDLSTAEVVGYAGSIGSLFLGTALQSVGSILVTGMVAHVTAA  157

Query  228  AVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLG-------LAVVILSGVAAAAN  280
            A  G  +T+GEAWA  RG    L GL LL    +  +L        LAVV+L   A    
Sbjct  158  AAIGRRLTLGEAWAATRGSRWRLVGLTLLLGLMLAGLLLAYGLLWILAVVLLPTWAIVLF  217

Query  281  EAAAALLGFPLLLVVGVSLAYLYVVLLFAPV-LIVLERLPIVEAITRSFALVRHGFWRVL  339
                 +L  P  L       + ++ + + PV  +++ER  ++ AI R F L R  FWR  
Sbjct  218  ----GVLSVPAFLAFA---CWFWIRVYYLPVPALMIERTRVLAAIGRGFRLTRRQFWRTF  270

Query  340  GIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTA  399
            GI LLTV+V G+ G+ ++APF I  +++    A      + LV   LSAI   +      
Sbjct  271  GIALLTVIVTGIAGSMLSAPFTIAAQLLPLAMAESRYAVLVLV--VLSAIATVVQTAFVT  328

Query  400  PFSAGVVVLLYTDRRIRAEAFDLVLQT  426
            PF++ V  + Y D+RIR EA+D+ L T
Sbjct  329  PFTSAVTSVQYLDQRIRKEAYDVELMT  355



Lambda     K      H
   0.321    0.143    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 936947369512


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40