BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3689
Length=451
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610825|ref|NP_218206.1| transmembrane protein [Mycobacteriu... 857 0.0
gi|31794860|ref|NP_857353.1| transmembrane protein [Mycobacteriu... 855 0.0
gi|289572337|ref|ZP_06452564.1| transmembrane protein [Mycobacte... 854 0.0
gi|308232533|ref|ZP_07416382.2| transmembrane protein [Mycobacte... 765 0.0
gi|323717551|gb|EGB26753.1| membrane protein [Mycobacterium tube... 763 0.0
gi|240172916|ref|ZP_04751575.1| hypothetical protein MkanA1_2662... 391 2e-106
gi|183985168|ref|YP_001853459.1| hypothetical protein MMAR_5199 ... 389 6e-106
gi|118619432|ref|YP_907764.1| hypothetical protein MUL_4272 [Myc... 386 4e-105
gi|254820808|ref|ZP_05225809.1| hypothetical protein MintA_12818... 354 2e-95
gi|41406460|ref|NP_959296.1| hypothetical protein MAP0362c [Myco... 353 2e-95
gi|118462736|ref|YP_879700.1| hypothetical protein MAV_0415 [Myc... 340 3e-91
gi|336460864|gb|EGO39749.1| hypothetical protein MAPs_36870 [Myc... 327 4e-87
gi|296166774|ref|ZP_06849196.1| transmembrane protein [Mycobacte... 306 7e-81
gi|126437789|ref|YP_001073480.1| hypothetical protein Mjls_5225 ... 297 2e-78
gi|108801820|ref|YP_642017.1| hypothetical protein Mmcs_4857 [My... 295 8e-78
gi|254773420|ref|ZP_05214936.1| hypothetical protein MaviaA2_019... 287 3e-75
gi|333992608|ref|YP_004525222.1| transmembrane protein [Mycobact... 278 2e-72
gi|118468350|ref|YP_890435.1| integral membrane protein [Mycobac... 273 5e-71
gi|342861948|ref|ZP_08718592.1| hypothetical protein MCOL_23775 ... 266 4e-69
gi|145221932|ref|YP_001132610.1| hypothetical protein Mflv_1340 ... 258 2e-66
gi|120406399|ref|YP_956228.1| putative transmembrane protein [My... 219 1e-54
gi|315446331|ref|YP_004079210.1| hypothetical protein Mspyr1_483... 212 1e-52
gi|169627496|ref|YP_001701145.1| hypothetical protein MAB_0392c ... 203 5e-50
gi|296139166|ref|YP_003646409.1| hypothetical protein Tpau_1442 ... 199 7e-49
gi|297562676|ref|YP_003681650.1| glycerophosphoryl diester phosp... 189 7e-46
gi|271962952|ref|YP_003337148.1| hypothetical protein Sros_1411 ... 171 3e-40
gi|154509503|ref|ZP_02045145.1| hypothetical protein ACTODO_0203... 154 2e-35
gi|293189435|ref|ZP_06608155.1| putative membrane protein [Actin... 150 5e-34
gi|269794262|ref|YP_003313717.1| hypothetical protein Sked_09330... 147 5e-33
gi|329944313|ref|ZP_08292572.1| hypothetical protein HMPREF9056_... 144 3e-32
gi|227497999|ref|ZP_03928175.1| possible integral membrane prote... 142 1e-31
gi|291439273|ref|ZP_06578663.1| integral membrane protein [Strep... 141 3e-31
gi|345015648|ref|YP_004818002.1| integral membrane protein [Stre... 139 1e-30
gi|317508341|ref|ZP_07966016.1| hypothetical protein HMPREF9336_... 138 2e-30
gi|320533911|ref|ZP_08034488.1| hypothetical protein HMPREF9057_... 137 4e-30
gi|29831604|ref|NP_826238.1| integral membrane protein [Streptom... 135 2e-29
gi|239988167|ref|ZP_04708831.1| putative integral membrane prote... 133 5e-29
gi|297200107|ref|ZP_06917504.1| integral membrane protein [Strep... 133 5e-29
gi|21221458|ref|NP_627237.1| integral membrane protein [Streptom... 133 7e-29
gi|116671259|ref|YP_832192.1| integral membrane protein [Arthrob... 132 1e-28
gi|291445151|ref|ZP_06584541.1| integral membrane protein [Strep... 132 2e-28
gi|318081807|ref|ZP_07989116.1| integral membrane protein [Strep... 131 2e-28
gi|269957299|ref|YP_003327088.1| hypothetical protein Xcel_2515 ... 129 9e-28
gi|317123407|ref|YP_004097519.1| hypothetical protein Intca_0235... 128 2e-27
gi|343523441|ref|ZP_08760402.1| putative membrane protein [Actin... 128 2e-27
gi|158317587|ref|YP_001510095.1| hypothetical protein Franean1_5... 128 2e-27
gi|290959915|ref|YP_003491097.1| protein [Streptomyces scabiei 8... 127 4e-27
gi|291453739|ref|ZP_06593129.1| integral membrane protein [Strep... 127 4e-27
gi|302544905|ref|ZP_07297247.1| putative membrane protein [Strep... 127 4e-27
gi|119718127|ref|YP_925092.1| hypothetical protein Noca_3907 [No... 125 2e-26
>gi|15610825|ref|NP_218206.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
gi|15843307|ref|NP_338344.1| hypothetical protein MT3791 [Mycobacterium tuberculosis CDC1551]
gi|148663552|ref|YP_001285075.1| putative transmembrane protein [Mycobacterium tuberculosis H37Ra]
30 more sequence titles
Length=451
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/451 (99%), Positives = 451/451 (100%), Gaps = 0/451 (0%)
Query 1 LHKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP 60
+HKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP
Sbjct 1 MHKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP 60
Query 61 AGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVA 120
AGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVA
Sbjct 61 AGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVA 120
Query 121 PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF 180
PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF
Sbjct 121 PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF 180
Query 181 GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW 240
GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW
Sbjct 181 GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW 240
Query 241 AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA 300
AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA
Sbjct 241 AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA 300
Query 301 YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF 360
YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF
Sbjct 301 YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF 360
Query 361 MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF 420
MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF
Sbjct 361 MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF 420
Query 421 DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF 451
DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF
Sbjct 421 DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF 451
>gi|31794860|ref|NP_857353.1| transmembrane protein [Mycobacterium bovis AF2122/97]
gi|121639603|ref|YP_979827.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224992099|ref|YP_002646788.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
14 more sequence titles
Length=451
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/451 (99%), Positives = 451/451 (100%), Gaps = 0/451 (0%)
Query 1 LHKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP 60
+HKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP
Sbjct 1 MHKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP 60
Query 61 AGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVA 120
AGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPP+A
Sbjct 61 AGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPLA 120
Query 121 PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF 180
PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF
Sbjct 121 PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF 180
Query 181 GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW 240
GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW
Sbjct 181 GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW 240
Query 241 AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA 300
AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA
Sbjct 241 AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA 300
Query 301 YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF 360
YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF
Sbjct 301 YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF 360
Query 361 MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF 420
MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF
Sbjct 361 MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF 420
Query 421 DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF 451
DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF
Sbjct 421 DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF 451
>gi|289572337|ref|ZP_06452564.1| transmembrane protein [Mycobacterium tuberculosis K85]
gi|339633681|ref|YP_004725323.1| hypothetical protein MAF_36970 [Mycobacterium africanum GM041182]
gi|289536768|gb|EFD41346.1| transmembrane protein [Mycobacterium tuberculosis K85]
gi|339333037|emb|CCC28766.1| putative conserved transmembrane protein [Mycobacterium africanum
GM041182]
Length=451
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/451 (99%), Positives = 451/451 (100%), Gaps = 0/451 (0%)
Query 1 LHKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP 60
+HKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP
Sbjct 1 MHKRYAPQRPKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAP 60
Query 61 AGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVA 120
AGYPPYPATPPGYGPPGYGAPP+YGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPP+A
Sbjct 61 AGYPPYPATPPGYGPPGYGAPPNYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPLA 120
Query 121 PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF 180
PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF
Sbjct 121 PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF 180
Query 181 GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW 240
GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW
Sbjct 181 GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW 240
Query 241 AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA 300
AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA
Sbjct 241 AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA 300
Query 301 YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF 360
YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF
Sbjct 301 YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF 360
Query 361 MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF 420
MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF
Sbjct 361 MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF 420
Query 421 DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF 451
DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF
Sbjct 421 DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF 451
>gi|308232533|ref|ZP_07416382.2| transmembrane protein [Mycobacterium tuberculosis SUMu001]
gi|308369195|ref|ZP_07416914.2| transmembrane protein [Mycobacterium tuberculosis SUMu002]
gi|308371418|ref|ZP_07424922.2| transmembrane protein [Mycobacterium tuberculosis SUMu003]
11 more sequence titles
Length=412
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/412 (99%), Positives = 412/412 (100%), Gaps = 0/412 (0%)
Query 40 VSMLPPGYPVEPPPVAPGYAPAGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAA 99
+SMLPPGYPVEPPPVAPGYAPAGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAA
Sbjct 1 MSMLPPGYPVEPPPVAPGYAPAGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAA 60
Query 100 PPGCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTA 159
PPGCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTA
Sbjct 61 PPGCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTA 120
Query 160 MVVVTLQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSG 219
MVVVTLQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSG
Sbjct 121 MVVVTLQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSG 180
Query 220 MLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAA 279
MLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAA
Sbjct 181 MLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAA 240
Query 280 NEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVL 339
NEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVL
Sbjct 241 NEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVL 300
Query 340 GIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTA 399
GIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTA
Sbjct 301 GIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTA 360
Query 400 PFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF 451
PFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF
Sbjct 361 PFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF 412
>gi|323717551|gb|EGB26753.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
gi|339296498|gb|AEJ48609.1| putative transmembrane protein [Mycobacterium tuberculosis CCDC5079]
gi|339300097|gb|AEJ52207.1| putative transmembrane protein [Mycobacterium tuberculosis CCDC5180]
Length=410
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/410 (100%), Positives = 410/410 (100%), Gaps = 0/410 (0%)
Query 42 MLPPGYPVEPPPVAPGYAPAGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPP 101
MLPPGYPVEPPPVAPGYAPAGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPP
Sbjct 1 MLPPGYPVEPPPVAPGYAPAGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPP 60
Query 102 GCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMV 161
GCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMV
Sbjct 61 GCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMV 120
Query 162 VVTLQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGML 221
VVTLQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGML
Sbjct 121 VVTLQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGML 180
Query 222 TVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANE 281
TVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANE
Sbjct 181 TVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANE 240
Query 282 AAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGI 341
AAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGI
Sbjct 241 AAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGI 300
Query 342 RLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPF 401
RLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPF
Sbjct 301 RLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPF 360
Query 402 SAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF 451
SAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF
Sbjct 361 SAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF 410
>gi|240172916|ref|ZP_04751575.1| hypothetical protein MkanA1_26622 [Mycobacterium kansasii ATCC
12478]
Length=477
Score = 391 bits (1004), Expect = 2e-106, Method: Compositional matrix adjust.
Identities = 238/331 (72%), Positives = 275/331 (84%), Gaps = 4/331 (1%)
Query 121 PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF 180
PGAVKPGIIPLRPLTLSDI+NGA GYIR NPKATLGLTA+VVV +Q+I+L+A GP+TA
Sbjct 151 PGAVKPGIIPLRPLTLSDIYNGAAGYIRTNPKATLGLTAIVVVIMQVITLIATVGPLTAL 210
Query 181 GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW 240
+ EL+ V G W S AS LV+WL G+LLSG+LTV+VGRAVFGSPIT+GEAW
Sbjct 211 NQLENQPSTELSLGVFGAWMGSVAASGLVTWLGGMLLSGILTVVVGRAVFGSPITIGEAW 270
Query 241 AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA 300
A+VRGR+LAL GLALLEAAG+VA+ GL VVIL GVAAA N AAA L+G PLLL+VG+ LA
Sbjct 271 ARVRGRVLALIGLALLEAAGMVALGGLVVVILVGVAAAVNGAAAVLVGIPLLLLVGLLLA 330
Query 301 YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF 360
YLY +L+FAPVLIVLERLP+V+A+ RSF LVR GFWRVLGIRLLT LVVG+VG A+AAPF
Sbjct 331 YLYTMLVFAPVLIVLERLPLVDAVIRSFRLVRGGFWRVLGIRLLTALVVGLVGGAVAAPF 390
Query 361 MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF 420
I +I+ VTAS+GS+ M LVG TLSA+G I QI+TAPF+AGVVVLLYTDRR+RAEAF
Sbjct 391 SIASQILLGVTASEGSIGMLLVGTTLSAVGSAISQIITAPFTAGVVVLLYTDRRMRAEAF 450
Query 421 DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF 451
DLVLQT G AGGPA VESTDNLWLTRP+
Sbjct 451 DLVLQT----GAAGGPAAVESTDNLWLTRPY 477
>gi|183985168|ref|YP_001853459.1| hypothetical protein MMAR_5199 [Mycobacterium marinum M]
gi|183178494|gb|ACC43604.1| conserved membrane protein [Mycobacterium marinum M]
Length=420
Score = 389 bits (999), Expect = 6e-106, Method: Compositional matrix adjust.
Identities = 246/331 (75%), Positives = 279/331 (85%), Gaps = 5/331 (1%)
Query 121 PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF 180
PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTA+VVV +Q+I+L+A GP+ A
Sbjct 95 PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAIVVVVMQVITLLATIGPLEAA 154
Query 181 GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW 240
T P EL+ VVG W+ S A LLVSWL G+LLSG+LTV+VGRAVFGSPIT+ EAW
Sbjct 155 SRFDT-HPSELSWGVVGAWTGSAAAGLLVSWLGGMLLSGILTVVVGRAVFGSPITISEAW 213
Query 241 AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA 300
A+VRGR+LAL GLALLE AG+VA+ GL VVIL GVAAAAN A AALLGFPL+L+VG+ +A
Sbjct 214 ARVRGRILALIGLALLEGAGLVALAGLVVVILVGVAAAANGATAALLGFPLVLLVGLLVA 273
Query 301 YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF 360
YLY VL+FAPVLIVLERLP+V+AITRSFALV GFWRVLGIRLLT +VVG+VG AI+APF
Sbjct 274 YLYTVLMFAPVLIVLERLPLVDAITRSFALVTGGFWRVLGIRLLTAIVVGLVGGAISAPF 333
Query 361 MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF 420
IVG+I+ TAS+GS M LVG TLS+IG I QI+TAPF+AGVVVLLYTDRR+RAEAF
Sbjct 334 GIVGQILLGATASEGSTGMFLVGMTLSSIGSAISQIITAPFTAGVVVLLYTDRRMRAEAF 393
Query 421 DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF 451
DLVLQT G AGGPA VESTDNLWLTRP
Sbjct 394 DLVLQT----GAAGGPAAVESTDNLWLTRPL 420
>gi|118619432|ref|YP_907764.1| hypothetical protein MUL_4272 [Mycobacterium ulcerans Agy99]
gi|118571542|gb|ABL06293.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
Length=419
Score = 386 bits (992), Expect = 4e-105, Method: Compositional matrix adjust.
Identities = 245/331 (75%), Positives = 278/331 (84%), Gaps = 5/331 (1%)
Query 121 PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAF 180
PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTA+VVV +Q+I+L+A GP+ A
Sbjct 94 PGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAIVVVVMQVITLLAAIGPLEAA 153
Query 181 GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW 240
T P EL+ VVG W+ S A LLVSWL G+LLSG+LTV+VGRAVFGSPIT+ EAW
Sbjct 154 SRFDT-HPSELSWGVVGAWTGSAAAGLLVSWLGGMLLSGILTVVVGRAVFGSPITISEAW 212
Query 241 AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA 300
A+VRGR+LAL GLALLE AG+VA+ GL VVIL GVAAAAN A AALLGFPL+L+VG+ +A
Sbjct 213 ARVRGRILALIGLALLEGAGLVALAGLVVVILVGVAAAANGATAALLGFPLVLLVGLLVA 272
Query 301 YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF 360
YLY VL+FAPVLIVLERLP+V+AITRSFALV GFWRVLGIRLLT +VVG+VG AI+APF
Sbjct 273 YLYTVLMFAPVLIVLERLPLVDAITRSFALVTGGFWRVLGIRLLTAIVVGLVGGAISAPF 332
Query 361 MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF 420
IVG+I+ TAS+GS M LVG TLS+IG I QI+TAPF+AGVVVLLYTDRR+RAEAF
Sbjct 333 GIVGQILLGATASEGSTGMFLVGMTLSSIGSAISQIITAPFTAGVVVLLYTDRRMRAEAF 392
Query 421 DLVLQTGLEAGPAGGPAPVESTDNLWLTRPF 451
DLVLQT G AGGPA VESTD LWLTRP
Sbjct 393 DLVLQT----GAAGGPAAVESTDTLWLTRPL 419
>gi|254820808|ref|ZP_05225809.1| hypothetical protein MintA_12818 [Mycobacterium intracellulare
ATCC 13950]
Length=396
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 225/353 (64%), Positives = 265/353 (76%), Gaps = 15/353 (4%)
Query 100 PPGCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTA 159
PPG G PP +G P GYG VKPGIIPLRPLTL DIFNGAVGY+RANPKATLGLTA
Sbjct 58 PPGYGTPPAFGAPPGYG------TVKPGIIPLRPLTLGDIFNGAVGYVRANPKATLGLTA 111
Query 160 MVVVTLQIISLVALFGPMTAFGDIVT-GEPDELTGAVVGGWSASFGASLLVSWLAGVLLS 218
+VVV +QII+ VA FGP+ A T GEPD LT V+G W+AS GA LLV WL G+LLS
Sbjct 112 IVVVVMQIITKVAFFGPLAAHDRFTTTGEPDTLTAGVLGAWTASVGAGLLVGWLGGMLLS 171
Query 219 GMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAA 278
GMLTVIVGRAVFGSPIT+GE W ++RGRL AL GLAL+EA V A+ GL VI+ +AA
Sbjct 172 GMLTVIVGRAVFGSPITIGETWTRIRGRLPALLGLALVEAVVVAALAGLVAVIIGVLAAI 231
Query 279 ANEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRV 338
+ AAA +LG PL+LVV +L YLY V+LFAPVLIVLERLP+++AITRSF L+R+GFWRV
Sbjct 232 GSAAAAVVLGIPLVLVVLAALVYLYTVVLFAPVLIVLERLPVLDAITRSFKLIRNGFWRV 291
Query 339 LGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVT 398
LGIR LT LV +V NA+A PF IVG+ +T+S T L+ + +G IG+I+T
Sbjct 292 LGIRTLTFLVASIVANAVAVPFSIVGQFF-QITSSG---TAFLISTAILFVGAAIGEIIT 347
Query 399 APFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF 451
APF+AGV+VLLYTDRR+RAEAFDLVLQT G A GP STD+LWLTRP
Sbjct 348 APFNAGVIVLLYTDRRMRAEAFDLVLQT----GAAQGPYAAASTDHLWLTRPL 396
>gi|41406460|ref|NP_959296.1| hypothetical protein MAP0362c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394809|gb|AAS02679.1| hypothetical protein MAP_0362c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=419
Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 237/455 (53%), Positives = 282/455 (62%), Gaps = 57/455 (12%)
Query 11 KPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAPAGYPPYPATP 70
+ + K + RRQDG HDE PPV + P +
Sbjct 6 RAGARVNVVKWSGRRQDGAHDE-------------------PPV--------HEPRGSVS 38
Query 71 PGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVAP--------- 121
G PP+YGP YG A G P YG G P P
Sbjct 39 APPPGYPVGPPPAYGPQSQYG-------AQYGAHFPGRYGAHYGPPPTYPPPGYPPAPAF 91
Query 122 ------GAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFG 175
G +KPGIIPLRPLTL DIFNGAVGYIRANPKATLGLTA+VV+ +QII+ A+ G
Sbjct 92 GPPPGYGVLKPGIIPLRPLTLGDIFNGAVGYIRANPKATLGLTAIVVIAMQIITKAAVLG 151
Query 176 PMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPIT 235
P+ A+G DELT V+G WS S GA +LV WL G+LLSGMLTVIVGRAVFGS IT
Sbjct 152 PLAAYGRFTGDRSDELTAGVLGAWSVSVGAGVLVGWLGGMLLSGMLTVIVGRAVFGSSIT 211
Query 236 VGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVV 295
+GE W K+RGRL AL GLALLEA V A+ GL VV+++ +A N AAA +LG PL+L V
Sbjct 212 IGETWTKIRGRLPALLGLALLEAVVVAAIAGLVVVVIAILATIGNAAAAVVLGIPLVLTV 271
Query 296 GVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNA 355
L YLY V+LFAPVLIVLERLP+++AITRSF LVR GFWRVLGIR L LV VV NA
Sbjct 272 IAVLVYLYTVVLFAPVLIVLERLPVLDAITRSFQLVRRGFWRVLGIRALAFLVTAVVANA 331
Query 356 IAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRI 415
+A PF IVG++ +S G T L+ + ++G IG+I+TAPF+AGV+VLLYTDRR+
Sbjct 332 VAVPFSIVGQVFQ--ISSSG--TAFLISTAILSVGAAIGEIITAPFNAGVIVLLYTDRRM 387
Query 416 RAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRP 450
RAEAFDLVLQ+ G A G STD+LWLTRP
Sbjct 388 RAEAFDLVLQS----GAAQGSYAAASTDSLWLTRP 418
>gi|118462736|ref|YP_879700.1| hypothetical protein MAV_0415 [Mycobacterium avium 104]
gi|118164023|gb|ABK64920.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=418
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 245/443 (56%), Positives = 289/443 (66%), Gaps = 34/443 (7%)
Query 11 KPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPPPVAPGYAPAG-YPPYPAT 69
+ + K + RRQDG HDE PPV + P G P
Sbjct 6 RAGARVNVVKWSGRRQDGAHDE-------------------PPV---HEPRGSVSAPPPG 43
Query 70 PPGYGPPGYGAPPSYGPPPGYGPP--LGYPAAPPGCGPPPGYGPPLGYGPPVAPGAVKPG 127
P PP YG+ YG G P G PP PPPGY P +GPP G +KPG
Sbjct 44 YPVGPPPAYGSQSHYGTQYGAQYPGQYGVHYGPPPTYPPPGYPPAPAFGPPPGYGVLKPG 103
Query 128 IIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDIVTGE 187
IIPLRPLTL DIFNGAVGYIRANPKATLGLTA+VV+ +QII+ A+ GP+ A+G
Sbjct 104 IIPLRPLTLGDIFNGAVGYIRANPKATLGLTAIVVIAMQIITKAAVLGPLAAYGRFTGDR 163
Query 188 PDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAWAKVRGRL 247
DELT V+G WS S GA +LV WL G+LLSGMLTVIVGRAVFGS ITVGE W K+RGRL
Sbjct 164 SDELTAGVLGAWSVSVGAGVLVGWLGGMLLSGMLTVIVGRAVFGSSITVGETWTKIRGRL 223
Query 248 LALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLAYLYVVLL 307
AL GLALLEA V A+ GL VV+++ +AA N AAA +LG PL+L V L YLY V+L
Sbjct 224 PALLGLALLEAVVVAAIAGLVVVVIAILAAIGNAAAAVVLGIPLVLTVIAVLVYLYTVVL 283
Query 308 FAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIV 367
FAPVLIVLERLP+++AITRSF LVR GFWRVLGIR L LV VV NA+A PF IVG++
Sbjct 284 FAPVLIVLERLPVLDAITRSFRLVRRGFWRVLGIRALAFLVTAVVANAVAVPFSIVGQVF 343
Query 368 TAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVLQTG 427
+S G T L+ + ++G IG+I+TAPF+AGV+VLLYTDRR+RAEAFDL
Sbjct 344 Q--ISSSG--TAFLISTAILSVGAAIGEIITAPFNAGVIVLLYTDRRMRAEAFDL----- 394
Query 428 LEAGPAGGPAPVESTDNLWLTRP 450
L++G A G STDNLWLTRP
Sbjct 395 LQSGAAQGSYAAASTDNLWLTRP 417
>gi|336460864|gb|EGO39749.1| hypothetical protein MAPs_36870 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=386
Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 205/355 (58%), Positives = 243/355 (69%), Gaps = 33/355 (9%)
Query 96 YPAAPPGCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATL 155
Y PG P LRPLTL DIFNGAVGYIRANPKATL
Sbjct 64 YGVLKPGIIP-------------------------LRPLTLGDIFNGAVGYIRANPKATL 98
Query 156 GLTAMVVVTLQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGV 215
GLTA+VV+ +QII+ A+ GP+ A+G DELT V+G WS S GA +LV WL G+
Sbjct 99 GLTAIVVIAMQIITKAAVLGPLAAYGRFTGDRSDELTAGVLGAWSVSVGAGVLVGWLGGM 158
Query 216 LLSGMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGV 275
LLSGMLTVIVGRAVFGS IT+GE W K+RGRL AL GLALLEA V A+ GL VV+++ +
Sbjct 159 LLSGMLTVIVGRAVFGSSITIGETWTKIRGRLPALLGLALLEAVVVAAIAGLVVVVIAIL 218
Query 276 AAAANEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGF 335
A N AAA +LG PL+L V L YLY V+LFAPVLIVLERLP+++AITRSF LVR GF
Sbjct 219 ATIGNAAAAVVLGIPLVLTVIAVLVYLYTVVLFAPVLIVLERLPVLDAITRSFQLVRRGF 278
Query 336 WRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQ 395
WRVLGIR L LV VV NA+A PF IVG++ +S G T L+ + ++G IG+
Sbjct 279 WRVLGIRALAFLVTAVVANAVAVPFSIVGQVFQ--ISSSG--TAFLISTAILSVGAAIGE 334
Query 396 IVTAPFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRP 450
I+TAPF+AGV+VLLYTDRR+RAEAFDLVLQ+ G A G STD+LWLTRP
Sbjct 335 IITAPFNAGVIVLLYTDRRMRAEAFDLVLQS----GAAQGSYAAASTDSLWLTRP 385
>gi|296166774|ref|ZP_06849196.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897871|gb|EFG77455.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=310
Score = 306 bits (783), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 193/317 (61%), Positives = 241/317 (77%), Gaps = 8/317 (2%)
Query 134 LTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDIVTGEPDELTG 193
+TL DIFNGAVGY+RANP+ATLGLTA+VVV +QI++ VA+FGP+ A+G + T + EL+
Sbjct 1 MTLGDIFNGAVGYVRANPRATLGLTAIVVVAIQIVTKVAVFGPLAAYGRLTTDQAKELSS 60
Query 194 AVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGL 253
VVG W S GA +LV+WL G+LLSGMLTVIVGRAVFG+PIT+GE WAK+RGRL+ L GL
Sbjct 61 GVVGAWLTSMGAGVLVAWLGGMLLSGMLTVIVGRAVFGTPITIGETWAKIRGRLVPLLGL 120
Query 254 ALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLI 313
A+LE A + GL VI++ +AA + AA LLG PL L + L YLY V+LFAPVLI
Sbjct 121 AVLEGAVLAVFAGLVAVIVAVLAAIGSAAAVVLLGLPLALAMLALLVYLYTVVLFAPVLI 180
Query 314 VLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTAS 373
VLERLP+++AITRSF LVR+GFWRVLGIR+LT+LV VV A+A PF IV ++ VT S
Sbjct 181 VLERLPVLDAITRSFVLVRNGFWRVLGIRVLTLLVTSVVAAAVAVPFNIVSQVFL-VTPS 239
Query 374 DGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPA 433
+ LV ++++G IG+I+TAPF+AGV+ LLYTDRR+RAEAFDLVLQTG
Sbjct 240 TAAF---LVSTAVASVGAAIGEIITAPFNAGVITLLYTDRRMRAEAFDLVLQTGAAG--- 293
Query 434 GGPAPVESTDNLWLTRP 450
GP+ STDNLWLTRP
Sbjct 294 -GPSGAASTDNLWLTRP 309
>gi|126437789|ref|YP_001073480.1| hypothetical protein Mjls_5225 [Mycobacterium sp. JLS]
gi|126237589|gb|ABO00990.1| putative conserved transmembrane protein [Mycobacterium sp. JLS]
Length=398
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 208/389 (54%), Positives = 248/389 (64%), Gaps = 16/389 (4%)
Query 62 GYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVAP 121
GYPP P GY PPGY Y PPPGY GYP PPG P
Sbjct 23 GYPP-PGYQQGYPPPGY--QQGY-PPPGY--QHGYP--PPGYQHGYPPPGYPPQQGYAPP 74
Query 122 GAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLV-ALFGPMTAF 180
G +KPG+IPLRPL LSDIFNGAV YIR NPKATLGLTA+VVV Q+ISLV + GP+ A
Sbjct 75 GVIKPGVIPLRPLGLSDIFNGAVNYIRRNPKATLGLTAIVVVAAQLISLVLQILGPLIAT 134
Query 181 GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW 240
GD+ E V S S A + + LA V+LSGMLTVIVGRAVFG+ IT+GEAW
Sbjct 135 GDLDPTLSGEAGAGDVAVLSGSSLAGSITTALASVVLSGMLTVIVGRAVFGADITIGEAW 194
Query 241 AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA 300
+V+GRLLAL G LEA V+ ++ + VV + A AA L+G PL++ + +
Sbjct 195 QRVKGRLLALLGFTALEAVAVLLLIVVVVVAIIAAEAIGGGVAAFLVGAPLVIAAFLLIV 254
Query 301 YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF 360
Y+ L+F P LIVLERL IVEA RSF LV+ FWRVLGI +L L V+ A+ PF
Sbjct 255 YVATSLVFTPALIVLERLGIVEAAGRSFTLVKRDFWRVLGIWILAALAAAVIAGAVGVPF 314
Query 361 MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF 420
+ G+++ A + SDG V LVG L A+G IGQI+TAPFSAGV+VLLYTDRRIRAEAF
Sbjct 315 SLGGQLL-AGSGSDGGV---LVGLILIAVGAAIGQILTAPFSAGVIVLLYTDRRIRAEAF 370
Query 421 DLVLQTGLEAGPAGGPAPVESTDNLWLTR 449
DLVL TG AGP P +STD+LWLTR
Sbjct 371 DLVLHTGAAAGPG---VPADSTDHLWLTR 396
>gi|108801820|ref|YP_642017.1| hypothetical protein Mmcs_4857 [Mycobacterium sp. MCS]
gi|119870973|ref|YP_940925.1| hypothetical protein Mkms_4946 [Mycobacterium sp. KMS]
gi|108772239|gb|ABG10961.1| putative conserved transmembrane protein [Mycobacterium sp. MCS]
gi|119697062|gb|ABL94135.1| putative conserved transmembrane protein [Mycobacterium sp. KMS]
Length=398
Score = 295 bits (756), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 207/389 (54%), Positives = 247/389 (64%), Gaps = 16/389 (4%)
Query 62 GYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVAP 121
GYPP P GY PPGY Y PPPGY GYP PPG P
Sbjct 23 GYPP-PGYQQGYPPPGY--QQGY-PPPGY--QHGYP--PPGYQHGYPPPGYPPQQGYAPP 74
Query 122 GAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLV-ALFGPMTAF 180
+KPG+IPLRPL LSDIFNGAV YIR NPKATLGLTA+VVV Q+ISLV + GP+ A
Sbjct 75 DVIKPGVIPLRPLGLSDIFNGAVNYIRRNPKATLGLTAIVVVAAQLISLVLQILGPLIAT 134
Query 181 GDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW 240
GD+ E V S S A + + LA V+LSGMLTVIVGRAVFG+ IT+GEAW
Sbjct 135 GDLDPTLSGEAGAGDVAVLSGSSLAGSITTALASVVLSGMLTVIVGRAVFGADITIGEAW 194
Query 241 AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA 300
+V+GRLLAL G LEA V+ ++ + VV + A AA L+G PL++ + +
Sbjct 195 QRVKGRLLALLGFTALEAVAVLLLIVVVVVAIIAAEAIGGGVAAFLVGAPLVIAAFLLIV 254
Query 301 YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF 360
Y+ L+F P LIVLERL IVEA RSF LV+ FWRVLGI +L L V+ A+ PF
Sbjct 255 YVATSLVFTPALIVLERLGIVEAAGRSFTLVKRDFWRVLGIWILAALAAAVIAGAVGVPF 314
Query 361 MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF 420
+ G+++ A + SDG V LVG L A+G IGQI+TAPFSAGV+VLLYTDRRIRAEAF
Sbjct 315 SLGGQLL-AGSGSDGGV---LVGLILIAVGAAIGQILTAPFSAGVIVLLYTDRRIRAEAF 370
Query 421 DLVLQTGLEAGPAGGPAPVESTDNLWLTR 449
DLVL TG AGP P +STD+LWLTR
Sbjct 371 DLVLHTGAAAGPG---VPADSTDHLWLTR 396
>gi|254773420|ref|ZP_05214936.1| hypothetical protein MaviaA2_01906 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=389
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 188/350 (54%), Positives = 226/350 (65%), Gaps = 51/350 (14%)
Query 122 GAVKPGIIPLRPLTLSDIF---------------------NGAVGYIRANPKATLGLTAM 160
G +KPGIIPLRPLTL DIF
Sbjct 69 GVLKPGIIPLRPLTLGDIFNGAVGYIRANPKATLGLTAIV-------------------- 108
Query 161 VVVTLQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGM 220
V+ +QII+ A+ GP+ A+G DELT V+G WS S GA +LV WL G+LLSGM
Sbjct 109 -VIAMQIITKAAVLGPLAAYGRFTGDRSDELTAGVLGAWSVSVGAGVLVGWLGGMLLSGM 167
Query 221 LTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAAN 280
LTVIVGRAVFGS IT+GE W K+RGRL AL GLALLEA GV A+ GL VV+++ +A N
Sbjct 168 LTVIVGRAVFGSSITIGETWTKIRGRLPALLGLALLEAVGVAAIAGLVVVVIAILATIGN 227
Query 281 EAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLG 340
AAA +LG PL+L V L YLY V+LFAPVLIVLERLP+++AITRSF LVR GFWRVLG
Sbjct 228 AAAAVVLGIPLVLTVIAVLVYLYTVVLFAPVLIVLERLPVLDAITRSFRLVRRGFWRVLG 287
Query 341 IRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAP 400
IR L LV VV NA+A PF IVG++ +S G T L+ + ++G IG+I+TAP
Sbjct 288 IRALAFLVTAVVANAVAVPFSIVGQVFQ--ISSSG--TAFLISTAILSVGAAIGEIITAP 343
Query 401 FSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRP 450
F+AGV+VLLYTDRR+RAEAFDL L++G A G STDNLWLTRP
Sbjct 344 FNAGVIVLLYTDRRMRAEAFDL-----LQSGAAQGSYAAASTDNLWLTRP 388
>gi|333992608|ref|YP_004525222.1| transmembrane protein [Mycobacterium sp. JDM601]
gi|333488576|gb|AEF37968.1| transmembrane protein [Mycobacterium sp. JDM601]
Length=319
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 172/325 (53%), Positives = 215/325 (67%), Gaps = 10/325 (3%)
Query 128 IIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDIVTGE 187
+IPLRPL+L+DI+NGAVGY+RANP LGLTA+VVV QIIS +AL G + A G
Sbjct 1 MIPLRPLSLTDIYNGAVGYVRANPTVVLGLTAIVVVVTQIISGIALAGLLKAVAPEHRGS 60
Query 188 PD-ELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAWAKVRGR 246
E++G V W +F + LV+ L ++L+GMLT +VGR+VFGSPITVGEAWA VR R
Sbjct 61 SAGEISGGDVVAWLIAFAGAGLVTALGTIVLTGMLTAVVGRSVFGSPITVGEAWAIVRTR 120
Query 247 LLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLAYLYVVL 306
AL GL +L + G AV ++ A AA L+G PL+L + +L Y Y V+
Sbjct 121 FAALIGLTVLVGLAAAVLCGFAVFVIVMAGGAGGSGAAVLVGLPLVLALIAALGYGYAVV 180
Query 307 LFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEI 366
FAP +IVLER P+ EA+ RSF LVR+ FWRVLGI LT L+ +V +A+A PF I+G
Sbjct 181 AFAPTVIVLERQPVFEAMRRSFTLVRNSFWRVLGILALTALIASLVSSAVAFPFNIIG-- 238
Query 367 VTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVLQT 426
AVT ++T S IG TIGQI+ PF+AGV VLLYTDRRIRAEAFDLVL+T
Sbjct 239 -MAVTHGADALTTSAQLDVFSRIGATIGQIIVLPFTAGVAVLLYTDRRIRAEAFDLVLRT 297
Query 427 GLEAGP-AGGPAPVESTDNLWLTRP 450
G+ +GP A G STD LWLTRP
Sbjct 298 GVTSGPYAAG-----STDQLWLTRP 317
>gi|118468350|ref|YP_890435.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
gi|118169637|gb|ABK70533.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
Length=357
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 194/348 (56%), Positives = 243/348 (70%), Gaps = 15/348 (4%)
Query 107 PGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQ 166
PGY G+G PV PGI+ LRPL+LSDIFNGAV YIR NPKATLGLT +VVV Q
Sbjct 22 PGYASAPGFGAPV------PGIVALRPLSLSDIFNGAVAYIRRNPKATLGLTTIVVVLAQ 75
Query 167 IISLVALFGPMTAFGDI---VTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTV 223
+++L+ GP+ A G + V GE TGAV +S + A +LV+ LA VLL+GMLTV
Sbjct 76 LVTLLLQVGPLAAMGGLGSEVQGEAPS-TGAV-AMFSGATLAGVLVTQLASVLLTGMLTV 133
Query 224 IVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAA 283
I+GR++FG +T+G+AW ++RGRLLAL GL LLEA ++AV+ + + +++ A A
Sbjct 134 IIGRSIFGGTVTIGQAWERLRGRLLALIGLTLLEAVVLLAVVLVVIGLIAAAGAVGGAVA 193
Query 284 AALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRL 343
A ++G PL+L + + VLLFAPVLIVLERL + AI RSFALV+ GFWRVLGI L
Sbjct 194 AFVMGVPLVLAAVLGALFGLTVLLFAPVLIVLERLDVFAAIARSFALVKTGFWRVLGIWL 253
Query 344 LTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSA 403
L LV V+ +A+ APF IVG+++T + DG V M +VG L A+G TIGQIVTAPF+A
Sbjct 254 LASLVASVIASAVGAPFSIVGQLLT--MSPDG-VGMSIVGLVLVAVGGTIGQIVTAPFAA 310
Query 404 GVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF 451
GV VLLYTDRRIRAEAFDLVL+TG PA AP ESTD LWL R F
Sbjct 311 GVDVLLYTDRRIRAEAFDLVLRTGAYT-PAPPAAPAESTDQLWLVRHF 357
>gi|342861948|ref|ZP_08718592.1| hypothetical protein MCOL_23775 [Mycobacterium colombiense CECT
3035]
gi|342130488|gb|EGT83797.1| hypothetical protein MCOL_23775 [Mycobacterium colombiense CECT
3035]
Length=281
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 169/287 (59%), Positives = 210/287 (74%), Gaps = 8/287 (2%)
Query 165 LQIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVI 224
+QI++ VA FGP+ A + + +P +L+ V+G WS S G +LV WL G+LLSGMLTVI
Sbjct 3 MQIVTKVAFFGPLAAADRLASDQPGQLSSGVLGAWSVSVGGGILVGWLGGMLLSGMLTVI 62
Query 225 VGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAA 284
VGRAVFGS IT+GE W+K+RGRLLAL GLALLEA V A+ GL VI+ +AA + AA
Sbjct 63 VGRAVFGSSITIGETWSKIRGRLLALLGLALLEAVVVAALAGLVAVIIGVLAAIGSAVAA 122
Query 285 ALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLL 344
+LG PL+LVV L +LY V+LFAPVLIVLERLP+++AI RSF LVR+GFWRVLGIR+L
Sbjct 123 VVLGIPLVLVVLALLVFLYTVVLFAPVLIVLERLPVMDAIARSFKLVRNGFWRVLGIRVL 182
Query 345 TVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAG 404
LV VV NA+A PF I G+ +T+S T LV + ++G IG+I+TAPF+AG
Sbjct 183 AFLVTSVVANAVAVPFSIAGQFFQ-ITSSG---TAFLVSTAVLSVGAAIGEIITAPFNAG 238
Query 405 VVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTRPF 451
V+VLLYTDRR+RAEAFDLVLQ+ G A GP STDNLWLTRP
Sbjct 239 VIVLLYTDRRMRAEAFDLVLQS----GAAQGPYAAASTDNLWLTRPL 281
>gi|145221932|ref|YP_001132610.1| hypothetical protein Mflv_1340 [Mycobacterium gilvum PYR-GCK]
gi|145214418|gb|ABP43822.1| putative conserved transmembrane protein [Mycobacterium gilvum
PYR-GCK]
Length=370
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 168/329 (52%), Positives = 215/329 (66%), Gaps = 11/329 (3%)
Query 124 VKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDI 183
+KPG++PLRPLTLSDIFNGAV Y+RANPKATLGLT +VVV QI+SLV P T F D+
Sbjct 50 LKPGVVPLRPLTLSDIFNGAVAYVRANPKATLGLTTIVVVAAQILSLVLSLVPFT-FTDM 108
Query 184 VT---GEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW 240
V GE DE + V+ GW AS A + + LA +L+GMLTV++GR+VFG+ ITVGEAW
Sbjct 109 VADGLGE-DEASVQVIVGWVASSLAGGIATALAATVLAGMLTVVIGRSVFGAGITVGEAW 167
Query 241 AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA 300
++R R L G +L+ + L L V I+ A A + PL+L ++
Sbjct 168 KRLRPRFWPLIGFTVLKMLVFLVGLVLVVGIIGATGALTTGVVAFAVAIPLVLAAVLAAV 227
Query 301 YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPF 360
+L V+L FAPV+IVLER IV A+ RSF L++ FWRV GI LL +V + A++ PF
Sbjct 228 WLSVMLTFAPVIIVLERRDIVTAVKRSFTLIKADFWRVFGIWLLAAIVAQFIAGAVSIPF 287
Query 361 MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF 420
+ G+I + +A+ S + L AIG IGQI+T PF+AGV VL Y DRRIRAEAF
Sbjct 288 TLGGQIAFSASATTASAMLAF---ALFAIGGAIGQIITGPFTAGVSVLQYADRRIRAEAF 344
Query 421 DLVLQTGLEAGPAGGPAPVESTDNLWLTR 449
DLVLQTG AGP AP +STD+LWLTR
Sbjct 345 DLVLQTGATAGP---YAPADSTDDLWLTR 370
>gi|120406399|ref|YP_956228.1| putative transmembrane protein [Mycobacterium vanbaalenii PYR-1]
gi|119959217|gb|ABM16222.1| putative conserved transmembrane protein [Mycobacterium vanbaalenii
PYR-1]
Length=384
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 162/381 (43%), Positives = 221/381 (59%), Gaps = 46/381 (12%)
Query 83 SYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNG 142
Y PPGY P G P PP G PP +KPG++PLRPLTLSDIFNG
Sbjct 36 QYWQPPGYAPGYGAPGYPPQFGLPP---------------VIKPGVVPLRPLTLSDIFNG 80
Query 143 AVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDIV-TGEPDELTGAVVGGWSA 201
AV YIR NPKATLGLTA+VV+ QI++L+ P G + T + DE + V+ W A
Sbjct 81 AVAYIRTNPKATLGLTAIVVIASQIVALLLSLWPFAFTGQVASTLDGDEASTEVLVSWMA 140
Query 202 SFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGV 261
S A+ + + L+ LLSG+LTV++GR+VFG+ IT+GEAW ++R RL AL G +L+ +
Sbjct 141 SSLATAITTGLSTTLLSGLLTVVIGRSVFGADITIGEAWRRLRPRLWALIGFTVLKTLAL 200
Query 262 VAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIV 321
+ G+ ++I+ A + AA L+ PL+L ++ ++ V+L FAP +IVLER IV
Sbjct 201 IVWFGVVLLIVVLAVAVIDGPAAFLIAAPLVLASILAAVWVSVMLTFAPAVIVLERRDIV 260
Query 322 EAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGE------------IVTA 369
++ RSFAL++ FWRV GI LL +V + A++ PF I G+ +++
Sbjct 261 TSVKRSFALIKSDFWRVFGIWLLAAIVAQFIAGAVSIPFSIGGQAVLTASATTTAAMISM 320
Query 370 VTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVLQTGLE 429
V S G +++ SA GVT+ Q RRIRAEAFDLVLQTG
Sbjct 321 VLFSVGGAVGQIITGPFSA-GVTVLQYTD--------------RRIRAEAFDLVLQTGAA 365
Query 430 AGPAGGPAPVESTDNLWLTRP 450
AGP AP +STD+LWLT P
Sbjct 366 AGPQ---APADSTDDLWLTGP 383
>gi|315446331|ref|YP_004079210.1| hypothetical protein Mspyr1_48380 [Mycobacterium sp. Spyr1]
gi|315264634|gb|ADU01376.1| hypothetical protein Mspyr1_48380 [Mycobacterium sp. Spyr1]
Length=370
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 158/352 (45%), Positives = 202/352 (58%), Gaps = 57/352 (16%)
Query 124 VKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDI 183
+KPG++PLRPLTLSDIFNGAV Y+RANPKATLGLT +VVV QI+SLV P T F D+
Sbjct 50 LKPGVVPLRPLTLSDIFNGAVAYVRANPKATLGLTTIVVVAAQILSLVLSLVPFT-FTDM 108
Query 184 VT---GEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW 240
V GE DE + V+ GW AS A + + LA +L+GMLTV++GR+VFG+ ITVGEAW
Sbjct 109 VADGLGE-DEASVQVIVGWVASSLAGGIATALAATVLAGMLTVVIGRSVFGAGITVGEAW 167
Query 241 AKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLA 300
++R R L G +L+ + L L V I+ A A + PL+L ++
Sbjct 168 KRLRPRFWPLIGFTVLKMLVFLVGLVLVVGIIGATGALTTGVVAFAVAIPLVLAAVLAAV 227
Query 301 YLYVVLLFAPVLIVLERLPIVEAITRSF-----------------------ALVRHGFWR 337
+L V+L FAPV+IVLER IV A+ RSF
Sbjct 228 WLSVMLTFAPVIIVLERRDIVTAVKRSFTLIKADFWRVFGIWLLAAIVAQF--------- 278
Query 338 VLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIV 397
+ A++ PF + G+I + +A+ S + L AIG IGQI+
Sbjct 279 --------------IAGAVSIPFTLGGQIAFSASATTASAMLAF---ALFAIGGAIGQII 321
Query 398 TAPFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLWLTR 449
T PF+AGV VL Y DRRIRAEAFDLVLQTG AGP AP +STD+LWLTR
Sbjct 322 TGPFTAGVSVLQYADRRIRAEAFDLVLQTGATAGP---YAPADSTDDLWLTR 370
>gi|169627496|ref|YP_001701145.1| hypothetical protein MAB_0392c [Mycobacterium abscessus ATCC
19977]
gi|169239463|emb|CAM60491.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=402
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 158/387 (41%), Positives = 209/387 (55%), Gaps = 38/387 (9%)
Query 72 GYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVAPGAVKPGIIPL 131
GY PPG+ P PPPGY P+A P P P A+KPG+IPL
Sbjct 35 GYPPPGFAYQP---PPPGY-QN---PSAVPYWVTP-------------EPPALKPGVIPL 74
Query 132 RPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDIVTGEPDEL 191
RPL LS ++NGA+ IRANPK TLGLTA+VV+ Q++ +FG A V
Sbjct 75 RPLDLSSLYNGAIAAIRANPKTTLGLTAIVVIVSQLL----IFGIQAAPATAVLTGAASF 130
Query 192 TGAVVGGWSASFGASLL--------VSWLAGVLLSGMLTVIVGRAVFGSPITVGEAWAKV 243
+ A+FG + V+ L ++LSGMLTV +GR+VFG T+ EAW +
Sbjct 131 DKNTEDSFGAAFGLGYIGGQLIGAVVTSLVTIILSGMLTVTIGRSVFGERTTIKEAWQRA 190
Query 244 RGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVSLAYLY 303
+ R+ AL G+A++E VLG V ++ G+A A A G L L + YL
Sbjct 191 KPRIWALLGVAVVELVLFAVVLGFGVAVVVGLALTVGPAGAIPAGLLLALAYFLFYLYLI 250
Query 304 VVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIV 363
V P +++LE+ + AI RS +LVR GFWR+LGI +LT +VG V I PF++V
Sbjct 251 PVFSLVPSVLILEQQSVFGAIGRSVSLVRKGFWRLLGILVLTGFIVGFVSMIIGMPFILV 310
Query 364 GEIVTAVTASDGSV---TMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAF 420
GE V A SD + M L+ A L+A+G I QI++ PF A V VLLYTD+R+R EA
Sbjct 311 GE-VAAFAGSDPNNLGPKMLLIFA-LAAVGAVIAQIISLPFKAAVNVLLYTDQRMRTEAL 368
Query 421 DLVLQTGLEAGPAGGPAPVESTDNLWL 447
DLVLQT G P D+LWL
Sbjct 369 DLVLQTEARTRERLG-QPGIDPDSLWL 394
>gi|296139166|ref|YP_003646409.1| hypothetical protein Tpau_1442 [Tsukamurella paurometabola DSM
20162]
gi|296027300|gb|ADG78070.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=439
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 167/446 (38%), Positives = 231/446 (52%), Gaps = 44/446 (9%)
Query 10 PKPDTETYIEKCTDRRQDGGHDERRQLLRPVSMLPPGYPVEPP-PVAPGYAPAGYPPYPA 68
P P + +QDG P + GYP P P PGY A Y
Sbjct 8 PDPGRHEQTGSSNEVQQDGAQWPHH----PGAESHAGYPASGPVPPQPGYPHAEYR---- 59
Query 69 TPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGP-PPGYGPPLGYGPPV----APGA 123
GY P G+ P P G+G P GY A P PPGYG P GY P AP A
Sbjct 60 ---GYLPQGFPNPSQGSPQSGHGAPSGYQAGYPQPRQVPPGYGQP-GYPPSYYGWGAPSA 115
Query 124 VKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDI 183
+PG IPLRPL + +I+NGA IRANP +G TA++VV Q+++ +A P+TA +
Sbjct 116 PEPGSIPLRPLNVGEIYNGAFAAIRANPGVMIGFTAIIVVVSQVLTFLAQI-PLTAV-SV 173
Query 184 VTGEPDELTGAVVGGWSASFGASL---LVSWLAGVLLSGMLTVIVGRAVFGSPITVGEAW 240
TG D+ A++ AS SL L++ LA +L+GMLTV+V R+V G G AW
Sbjct 174 DTGSDDD--SAILANSMASLAVSLGMSLITALATTILTGMLTVVVARSVLGDRTDAGSAW 231
Query 241 AKVRGRLLALFGLALLEA----AGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVG 296
++ RL L GL +++ + ++ + V++L G + AAAA+L L++V
Sbjct 232 RALKPRLWPLIGLVVIQGLIYLVPTMLLIAMLVLVLGG-----SWAAAAILAVLGLVLVF 286
Query 297 VSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAI 356
V + L A +VLE ++++ R F L R G+WR+LGI +LT L+ +V I
Sbjct 287 VVMLGLMPAFALATAAVVLEGRGPIDSLRRGFQLQRPGYWRLLGILVLTYLITSIVAGII 346
Query 357 AAPFMIVGEIVTAVTASDGSVT-MRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRI 415
A PF VG I +A S ++T ++G L+AI IG I+T PF + V LLYTD+R+
Sbjct 347 AIPFS-VGTIFSAGDGSLDNITGSSVLGLGLTAIAGVIGSIITMPFLSAVQTLLYTDQRM 405
Query 416 RAEAFDLVL--------QTGLEAGPA 433
R E FDLVL QTG+ GPA
Sbjct 406 RTERFDLVLQSASVHQTQTGIPIGPA 431
>gi|297562676|ref|YP_003681650.1| glycerophosphoryl diester phosphodiesterase, membrane domain-containing
protein [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296847124|gb|ADH69144.1| Glycerophosphoryl diester phosphodiesterase, membrane domain
protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111]
Length=514
Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 161/447 (37%), Positives = 218/447 (49%), Gaps = 63/447 (14%)
Query 44 PPGYP-VEPPPVAPGYAPAGYPPYPA-TPPGYGP-------------PGYGAPPSYGPPP 88
P G P PP PGY GY P+ PGYG GYG P+YG P
Sbjct 64 PQGQPNFAPPEQTPGYGQQGYGQTPSGQQPGYGQYGQHASGQQPSQGGGYGQQPAYGQQP 123
Query 89 GYG------------------PPLGYPAAPPGCGPPPGYGPPLGYG--PPVA-PGAVKPG 127
GYG P G PG G P GYG GYG PP P A+KPG
Sbjct 124 GYGQYGHGQQAQWQQSGHGQQPGYGQYGQQPGYGQP-GYGAQAGYGQQPPYGQPRALKPG 182
Query 128 IIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFG---DIV 184
++ LRP+TL DI NGA IR NPK T+GL +V+ I+S V G M+ +G D V
Sbjct 183 VVALRPMTLGDILNGAFSLIRNNPKTTVGLALVVMAVASIVSSVGFSGYMSGYGAFLDQV 242
Query 185 TGEPDELTGAV---VGGWS--ASFGASLLVSWLAGVLL-SGMLTVIVGRAVFGSPITVGE 238
+P + GWS A +G LL AG++L +G+LT +VG AV G ++ E
Sbjct 243 MADPASIDPNDPFPFSGWSLVALYGGGLLTQ--AGIILVTGLLTAVVGMAVLGRKLSPSE 300
Query 239 AWAKVRGRLLALFGLALLEAAGV----VAVLGLAVVILSGVAAAANEAAAALLGFPLLLV 294
AW VR R+ + GLALL+ + VAV VV GV A E+ + + +
Sbjct 301 AWTAVRSRIWTVVGLALLQLVTIFVLYVAVTVGIVVFFIGVFVAIAESQGVGVIVVIASM 360
Query 295 VGVS-----LAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVV 349
+GV+ +A++Y+ + FA + VLER+ A+TRS+ L + +WR GI LL +++
Sbjct 361 LGVAGGVALVAWIYIRIYFAIPVAVLERVGAGTALTRSWRLTQGRWWRTFGISLLASILM 420
Query 350 GVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLL 409
+V ++ PF IV + T + + +G + +TAPFS GV LL
Sbjct 421 FLVQGLLSTPFSIVSVVPTFIAPGAAWAAVVAGAVIY--VGNVVVYAITAPFSVGVKTLL 478
Query 410 YTDRRIRAEAFDLVL----QTGLEAGP 432
Y D R+R+E DL L Q G EAGP
Sbjct 479 YVDARMRSEGLDLKLHQVAQAGYEAGP 505
>gi|271962952|ref|YP_003337148.1| hypothetical protein Sros_1411 [Streptosporangium roseum DSM
43021]
gi|270506127|gb|ACZ84405.1| hypothetical protein Sros_1411 [Streptosporangium roseum DSM
43021]
Length=428
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 147/410 (36%), Positives = 213/410 (52%), Gaps = 29/410 (7%)
Query 52 PPVAPGYAPAGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGP 111
P PG+A PPY P G+P + PP P P G P YG
Sbjct 9 PDTPPGWASNQPPPYGDAP--------GSPWTAPGSGPGAPPPQPPPQQPHGGQAPPYGQ 60
Query 112 ---------PLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVV 162
P A++PGIIPLRPL + DI +GA+ IR+NPK LGL+A+V
Sbjct 61 PPPHRPGPYGPPPHGFPPPPAMRPGIIPLRPLGIGDILDGAIKLIRSNPKTILGLSAIVA 120
Query 163 VTLQIISLVALFGPMTAFGDIVTG--EPDELTGAVVGGWSASFGASLL---VSWLAGVLL 217
+ ++ G GD+ G +P L G+ A +G +L+ V ++A LL
Sbjct 121 A---LGAIPVAIGQAVMIGDLGAGLDDPSVLEDPQDIGFLAQYGGTLISYAVQFVAVTLL 177
Query 218 SGMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAA 277
+G+LT I+GRAVFG ++VGEAW R R+ LFGL + ++ + + + +++G+ A
Sbjct 178 TGVLTRILGRAVFGGKMSVGEAWQLTRNRVPTLFGLVAIGMLVMLIPMVVVIAVIAGLGA 237
Query 278 AANEAAAALLGFPLLLVVGVSLA-YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFW 336
A + A L L ++ V+ A ++ L A + VLER +++++ RS+ LV GFW
Sbjct 238 AGADFGALFLVGALAILGFVAYALFITTRLALAASVAVLERRGVIDSLRRSWNLVGGGFW 297
Query 337 RVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQI 396
R LGI LLT L+ +V ++ PF I+ +V + GS ++ A L A+G T+ +
Sbjct 298 RTLGILLLTQLITALVALVLSFPFTIMAFVVGMI--GKGSTGSQIGTAILIAVGGTVSAM 355
Query 397 VTAPFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVESTDNLW 446
+T PF AGV LLY DRR+RAEAFDLVLQT G S D+LW
Sbjct 356 ITYPFQAGVNGLLYADRRMRAEAFDLVLQTAAIEQQRQGWVH-ASADDLW 404
>gi|154509503|ref|ZP_02045145.1| hypothetical protein ACTODO_02035 [Actinomyces odontolyticus
ATCC 17982]
gi|153799137|gb|EDN81557.1| hypothetical protein ACTODO_02035 [Actinomyces odontolyticus
ATCC 17982]
Length=416
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/408 (33%), Positives = 195/408 (48%), Gaps = 37/408 (9%)
Query 49 VEPPPVAP--GYAPAGYPPYPATPPGYG-PPGYGAPPSY---GPPPGYGPPLGYPA-APP 101
P P AP G+ P P GYG GYGA Y P GYG GY A P
Sbjct 6 TSPDPSAPYQGWTPQPESGAPTPQQGYGAQQGYGAQQGYTAPQPAQGYGAQQGYAAPQAP 65
Query 102 GCGPPPGYGPPLGYGPPVAPGAV------------KPGIIPLRPLTLSDIFNGAVGYIRA 149
G P YG GY PGA KPGIIPLRPLT+ D+F+GA IR+
Sbjct 66 AYGAQPAYGAQPGYN--AQPGASGYSTTNRWGWQSKPGIIPLRPLTIGDLFSGAFEAIRS 123
Query 150 NPKATLGLTAMVVVTLQIISLVALFGPMTAFGDIVTG--EPDELTGAVVGGWSASF--GA 205
NPK G T ++++ + +I+ V++ + + +P L ++ +
Sbjct 124 NPKVLFGFTVVIMLFVSLIASVSILLSGLGYESVANTDYDPQALHQSMTDQTNVLLLRMI 183
Query 206 SLLVSWLA----GVLLSGMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFG-LALLEAAG 260
S +V W+A +L+G+L V + G +T+ EAWA R RL +L G AL
Sbjct 184 SNMVQWIATFAGTTILTGLLASTVSQMTIGRNLTLSEAWAMTRKRLGSLLGSFALTAVIT 243
Query 261 VVAVLGLAVVILSGVAA--AANEA--AAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLE 316
V ++ V + + +AA + N+ L+ F ++ + + + + + LLFAP+ VLE
Sbjct 244 AVPIILWIVAVFASLAALMSGNDDLWWLVLVAFAAIIPIFILVYFFQIKLLFAPICAVLE 303
Query 317 RLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGS 376
+ V ++ RS++LV+ FW LG LL L V +G I ++G +V+ SD S
Sbjct 304 EIGPVASLKRSWSLVKGEFWPTLGRFLLLNLAVSFIGGFIGFVIGLIGGLVSVAATSDPS 363
Query 377 VTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVL 424
VG+ ++ V +G + PFSA L+YTD RIR E F VL
Sbjct 364 SP---VGSAIAIFFVMLGSSLLLPFSASFETLMYTDLRIRKENFASVL 408
>gi|293189435|ref|ZP_06608155.1| putative membrane protein [Actinomyces odontolyticus F0309]
gi|292821525|gb|EFF80464.1| putative membrane protein [Actinomyces odontolyticus F0309]
Length=431
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 134/425 (32%), Positives = 191/425 (45%), Gaps = 56/425 (13%)
Query 49 VEPPPVAP--GYAPAGYPPYPATPPGYG-PPGYGAPPSY---GPPPGYGPPLGYPAAPPG 102
P P AP G+ P P GYG PGYGA Y P GYG GY A P
Sbjct 6 TSPDPSAPYQGWTPQPESGAPTPQQGYGAQPGYGAQQGYTAPQPTQGYGAQQGYTAPQP- 64
Query 103 CGPPPGYGPPLGYGPPVAPG------------------------------AVKPGIIPLR 132
GYG GY P AP KPGIIPLR
Sbjct 65 ---TQGYGAQQGYAAPQAPAYGAQPAYGAQPGYNAQPGASGYSTTNRWGWQSKPGIIPLR 121
Query 133 PLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDIVTG--EPDE 190
PLT+ D+F+GA IR+NPK G T ++++ + +I+ V++ + + +P
Sbjct 122 PLTIGDLFSGAFEAIRSNPKVLFGFTVVIMLLVSLIASVSILLSGLGYESVANTDYDPQA 181
Query 191 LTGAVVGGWSASF--GASLLVSWLA----GVLLSGMLTVIVGRAVFGSPITVGEAWAKVR 244
L ++ + S +V W+A +L+G+L V + G +T+ EAWA R
Sbjct 182 LHQSMTDRTNVLLLRMISNMVQWIATFAGTTILTGLLASTVSQMTVGRNLTLSEAWAMTR 241
Query 245 GRLLALFGLALLEA--AGVVAVLGLAVVILSGVAAAANEAA---AALLGFPLLLVVGVSL 299
RL +L G L A GV +L + V S A L+ F ++ + + +
Sbjct 242 KRLGSLLGSFALTAVITGVPIILWIVAVFASLAALMGGNDDLWWLVLVAFAAIIPIFILV 301
Query 300 AYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAP 359
+ + LLFAP+ VLE + V ++ RS++LV+ FW LG LL L V +G I
Sbjct 302 YFFQIKLLFAPICAVLEEIGPVASLKRSWSLVKGEFWPTLGRFLLLNLAVSFIGGFIGFV 361
Query 360 FMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEA 419
++G +V+ SD S VG+ ++ V +G + PFSA L+YTD RIR E
Sbjct 362 IGLIGGLVSVAATSDPSSP---VGSAIAIFFVMLGSSLLLPFSASFETLMYTDLRIRKEN 418
Query 420 FDLVL 424
F VL
Sbjct 419 FASVL 423
>gi|269794262|ref|YP_003313717.1| hypothetical protein Sked_09330 [Sanguibacter keddieii DSM 10542]
gi|269096447|gb|ACZ20883.1| hypothetical protein Sked_09330 [Sanguibacter keddieii DSM 10542]
Length=470
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 130/385 (34%), Positives = 191/385 (50%), Gaps = 35/385 (9%)
Query 56 PGYAPAGYPPYPATPPGYGPPGYGAPPSYGPPPGYG-PPLGYPAAPPGCGPPPGYGPPLG 114
PG AP G P + G P YG P YG P YG PP G PA G P PG+
Sbjct 98 PGGAPYGGAPQYGSQQYGGAPQYGGAPQYGGAPQYGGPPQGGPAY--GGLPAPGW----- 150
Query 115 YGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQII-SLVAL 173
PG KPGIIPLRPL+L +I++GA IR NPK LG+ A+V+ I+ +L+A
Sbjct 151 -----RPGPAKPGIIPLRPLSLGEIYDGAFAAIRKNPKVMLGVVALVIAVATIVPALIAY 205
Query 174 F-----------GPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVS---WLAGVLLSG 219
G +T F T + G + G + +LL+S +LA ++ +G
Sbjct 206 VLAPSANQWLDDGVVTVFDGSGTSQTSAELG--LDGIAGQLSQALLISLGVYLASIITTG 263
Query 220 MLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAA 279
+L V + R+V G+ TV E WA+VR +++ L ++LL + G+V V G + I++ +AA
Sbjct 264 LLIVAISRSVIGTSFTVSELWAQVRSKVVGLVVISLLPSVGIVLVAGAFIGIIAALAAGG 323
Query 280 NEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVL 339
L+ L+ V V +L L P VLE + +ITR + L R FWR+
Sbjct 324 AVEGVLLVSVLALVAVVVVAVWLLTRFLLTPAAYVLEGQSLGRSITRGWLLSRGSFWRLF 383
Query 340 GIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTA 399
GI LL+ ++ +V +A+P G +V + G TM ++ + I ++
Sbjct 384 GIYLLSSVLASIVSTLVASP----GSLVAGILFPSGD-TMHAGALAITVVTQIIASTIST 438
Query 400 PFSAGVVVLLYTDRRIRAEAFDLVL 424
F + VV LLY D R+R E D+ L
Sbjct 439 TFLSSVVALLYIDVRMRREGLDVEL 463
>gi|329944313|ref|ZP_08292572.1| hypothetical protein HMPREF9056_00449 [Actinomyces sp. oral taxon
170 str. F0386]
gi|328531043|gb|EGF57899.1| hypothetical protein HMPREF9056_00449 [Actinomyces sp. oral taxon
170 str. F0386]
Length=438
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 130/406 (33%), Positives = 203/406 (50%), Gaps = 54/406 (13%)
Query 51 PPPVAPGYAPAGYPPYPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYG 110
PP APGY Y P PGYG G Y GYG GY + P G P G
Sbjct 51 PPQGAPGYGS--YQTPPVGQPGYGADGGQGYQGYTDSAGYGA--GYASYPGAAGYPGYGG 106
Query 111 PPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISL 170
P P KP IIPLRPL++ +I GA +RANPKA + ++ V+T I+ L
Sbjct 107 NPSALAP-------KPSIIPLRPLSIGEILGGAFESLRANPKAMF-VPSLAVMT--IVGL 156
Query 171 VALFGPMTAFGDIVT-------GEPDELT-----GAVVGGWSASFGASLLVSWLAGVLLS 218
++ G + + + T G+P + +++ ++ S +S+L + LA +L+
Sbjct 157 ISAAGSVYSLNRLGTTSLYSSSGQPSDADVQKQLSSLLELYAQSAISSIL-TMLASSILT 215
Query 219 GMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLA----LLEAAGVVAVLGLAVVIL-- 272
G+L V V R + G ++G+ W + + R+ AL G A L+ +A + A +G+ V ++
Sbjct 216 GLLIVTVSRTILGRKASLGDVWQRTKPRVWALIGQAVIIQLILSAVMAAAIGIWVAVVFA 275
Query 273 ---------SGVAAAANEAAAALLG-FPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVE 322
S AA A LG F L+++VG+ + LY L AP ++LE + + E
Sbjct 276 LGVPGMVEGSSRQGAAATVLLAFLGLFILIVLVGLGVFALYCKLCLAPAALILENVGVFE 335
Query 323 AITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLV 382
I+RS+ L R FWR++GI+LL+V+++ P ++ I+ A S ++T+
Sbjct 336 GISRSWTLTRGNFWRIVGIQLLSVIIIVFATGIATTPVSLLAGILAATVPSVETLTL--- 392
Query 383 GATLSAIGVTIGQIVTA---PFSAGVVVLLYTDRRIRAEAFDLVLQ 425
A V +G IVTA PF + V L+YTD R+R+E D+ L+
Sbjct 393 -----AFSVLLGTIVTAATLPFDSAVRALIYTDLRMRSEGLDVELR 433
>gi|227497999|ref|ZP_03928175.1| possible integral membrane protein [Actinomyces urogenitalis
DSM 15434]
gi|226832589|gb|EEH64972.1| possible integral membrane protein [Actinomyces urogenitalis
DSM 15434]
Length=425
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 132/402 (33%), Positives = 184/402 (46%), Gaps = 42/402 (10%)
Query 60 PAGYPPYPATPPGYGPPGYGAPPSYG----PPPGYGPPLGYPAAPPGCGPPPGYGPPLG- 114
P+ P P+ G G P +G PPG + + PG P G P
Sbjct 26 PSWSPDQPSASLGAGTSAPSTQPRFGAYGATPPGQATSGSWQSGYPGYEPAQGQADPAQP 85
Query 115 YGPPVAPG-------AVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQI 167
YG P + G A KPGIIPLRPL++ +I +GA +RANPKA +V+ L +
Sbjct 86 YGAPGSSGVPGGFFLAPKPGIIPLRPLSIGEIISGAFESLRANPKAMFVPALIVMSVLGV 145
Query 168 ISLVALFGPMTAFGDIVTGEPDELTGAVVG---GWSAS----------FGASLLVSWLAG 214
IS V F + T +L VVG S S GA+ L+ LA
Sbjct 146 ISAVLSFTSSLGLDSLATSSTSDLESVVVGLDLTTSTSPASLLTTLLGSGATTLLMSLAS 205
Query 215 VLLSGMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVL----GLAVV 270
+L+G+L V V R+V G T GE W + R R+ AL G +LL + V VL G+ V
Sbjct 206 TVLTGLLIVAVSRSVLGRLATPGEVWQRTRSRVWALIGQSLLTSLIVYGVLAVGTGVTVA 265
Query 271 ILSGVAAAANEAAAALLG--FPLLLVV----GVSL-AYLYVVLLFAPVLIVLERLPIVEA 323
G+ +ALL F L +VV V L A+L+V L AP +VLE + ++ A
Sbjct 266 ASVGMFTTFGSQRSALLTVVFALAIVVLALTTVCLTAFLWVRLSMAPAALVLENVGVLTA 325
Query 324 ITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVG 383
++RS+ L R GFWRV G+ +L ++ V + + IV IV + S V+
Sbjct 326 MSRSWELTRQGFWRVFGVLVLAAIISNVAVSVVGGVTGIVAGIVGTIIGSFALVSALSSL 385
Query 384 ATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVLQ 425
V + PF+A V L Y D R+R E D+ L+
Sbjct 386 LGALLSAVIM------PFTAAVTALTYIDLRMRREGLDVELR 421
>gi|291439273|ref|ZP_06578663.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
gi|291342168|gb|EFE69124.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length=448
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/314 (36%), Positives = 171/314 (55%), Gaps = 18/314 (5%)
Query 123 AVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGD 182
A KPG+IPLRPL + +I +GAV +R + LG++ V V +I+ ++ + G
Sbjct 124 AAKPGVIPLRPLGVGEILDGAVSTMRTYWRTVLGISLTVAVLTEIVVVLLQGLVLDNTGT 183
Query 183 IVTGEPD----ELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGE 238
V +P ELTGA+ G + G LV+ + V + +LT + RAV G P+T GE
Sbjct 184 EVLNDPSATLSELTGAL-GDALLNSGVVFLVTLVGTVAATALLTTVTSRAVLGKPVTTGE 242
Query 239 AWAKVRGRLLALFGLALLE---AAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVV 295
AW R +++ LFGL L AG+V V L ++++ A A EA AL ++ V
Sbjct 243 AWRDARPQVVKLFGLICLLLLITAGIVTVGALPGLLVT--VAGAPEAGVALTALGIIGAV 300
Query 296 GVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNA 355
V+L + L +P L+ LE+ IV+A++RS LVR +WR+ GI+LL ++ VV +
Sbjct 301 VVTLWLMIRFSLSSPALM-LEKQGIVKAMSRSAKLVRGSWWRIFGIQLLATIIANVVASI 359
Query 356 IAAPFMIVGEIVTA-----VTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLY 410
I PF+ + + + ++ G + + +S IG IG +VT P +AGV LLY
Sbjct 360 IVLPFVFLAATFSGGFTGFLDSTGGDIGWTFL--VISGIGSVIGAMVTFPITAGVTALLY 417
Query 411 TDRRIRAEAFDLVL 424
D+RIR EA DL L
Sbjct 418 VDQRIRREALDLEL 431
>gi|345015648|ref|YP_004818002.1| integral membrane protein [Streptomyces violaceusniger Tu 4113]
gi|344041997|gb|AEM87722.1| integral membrane protein [Streptomyces violaceusniger Tu 4113]
Length=422
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 145/422 (35%), Positives = 202/422 (48%), Gaps = 46/422 (10%)
Query 56 PGYAPAGYPPYPATPPGYGPPGYGAPPSYGPP--PGYGPPLGYPAAPPGCGPPPGYGPPL 113
PG+AP G P+ P G P P P +G PPG PG GP
Sbjct 5 PGWAPPGS--SPSDEPDRGAQQQHEPADQPAPEQPTWGGQWARRQPPPGRWTAPGRGPTP 62
Query 114 -----------GYGP-PVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMV 161
G+G P P A +PG+IPLRPL +S+I NGAV +RA+ + LG++ +V
Sbjct 63 PQVPPAPAPGSGWGTGPRQPPAPRPGVIPLRPLAVSEILNGAVAIVRAHWRTVLGISLIV 122
Query 162 VVTLQIISLVA---LFGPMTAFGDIVTGEPDELTGAVVGGWSASFGAS---LLVSWLAGV 215
+ +Q + A F V +PD + AS G S LL+ L +
Sbjct 123 SIVIQGLITAATGLWFNHARGNESNVLDDPDATVSQAMRAVGASLGDSGVTLLLGVLGTI 182
Query 216 LLSGMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVL--GLAVVILS 273
+ + +LTV+ RAV G ++ EAW R LL L GL LL VAV+ G+ +L
Sbjct 183 VTTALLTVVTARAVLGRSVSTKEAWGGARPHLLQLCGLLLLIPTIAVAVIAAGMTPGLLL 242
Query 274 GVAAAANEAA--AALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALV 331
A +E A A+L GF GV++ +L+V AP ++LE+ I++A+ RSF LV
Sbjct 243 AFAGVPSEGAALASLGGFA---AAGVAV-WLWVRFSLAPPALMLEKQGIIKALRRSFKLV 298
Query 332 RHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSA--- 388
R + RV GI+LL V++V +VG + P ++ ++ A D L G ++SA
Sbjct 299 RGAWGRVFGIQLLAVVLVFIVGAIVEIPTSLIAMVIGGDNAMD-----WLSGESVSAGWT 353
Query 389 ------IGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVEST 442
+G I +T P SAGV LLY D+RIR EA DL L AG G PA
Sbjct 354 FLVVVGVGGVISSTITFPISAGVTALLYMDQRIRREALDLELARA--AGMPGDPAEGHGK 411
Query 443 DN 444
D
Sbjct 412 DQ 413
>gi|317508341|ref|ZP_07966016.1| hypothetical protein HMPREF9336_02388 [Segniliparus rugosus ATCC
BAA-974]
gi|316253365|gb|EFV12760.1| hypothetical protein HMPREF9336_02388 [Segniliparus rugosus ATCC
BAA-974]
Length=397
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/334 (37%), Positives = 177/334 (53%), Gaps = 31/334 (9%)
Query 125 KPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVV---VTLQIISLV-ALFGPMT-- 178
+PG IPLRPL+LS+I+NGAV +R+NPKA LG + +V+ LQ+ +L AL +
Sbjct 74 QPGAIPLRPLSLSEIYNGAVAVLRSNPKAVLGFSVVVLGFGALLQVAALAPALRWALRIA 133
Query 179 -AFGDIVT-GEPDEL-TGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPI- 234
AFG VT PD T + VG A+ V+ + L++G + ++ RA+ G P+
Sbjct 134 GAFGSAVTPDSPDSRSTISFVGAL-----ANAPVTAITATLIAGCVMPVLARALAGDPVP 188
Query 235 ----TVGEAWAKVRGRLLALFGLALLE--AAGVVAVLGLAVVILSGVAAAA-NEAAAALL 287
+ W + R R L L GLA L ++ +L + + + VAA A LL
Sbjct 189 GRRSSARAVWRETRARALPLAGLAFLVLFVQALIVLLPILIALFLVVAAGFPTPGAVVLL 248
Query 288 GF--PLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLT 345
F P+ L+V L L + L AP ++ ERL + A RS L R GFW++LG LLT
Sbjct 249 IFAEPVFLLVAYVLGVL--LSLSAPAMMS-ERLGVFAACRRSVRLARRGFWKLLGFGLLT 305
Query 346 VLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGV 405
LV VVG +++ PF +VGE++ + G L L +G + Q + PF+A V
Sbjct 306 RLVTSVVGLSLSLPFTVVGEMLASDKTQAGHAA--LWSMVLLTLGQLLAQSILMPFTASV 363
Query 406 VVLLYTDRRIRAEAFDLVLQT--GLEAGPAGGPA 437
LLY D+R+R EA+DLVL + G E G G A
Sbjct 364 TALLYVDQRMRQEAYDLVLLSTVGREGGEIGREA 397
>gi|320533911|ref|ZP_08034488.1| hypothetical protein HMPREF9057_02383 [Actinomyces sp. oral taxon
171 str. F0337]
gi|320133875|gb|EFW26246.1| hypothetical protein HMPREF9057_02383 [Actinomyces sp. oral taxon
171 str. F0337]
Length=446
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 136/442 (31%), Positives = 207/442 (47%), Gaps = 60/442 (13%)
Query 38 RPVSMLPPGYPVEPPPVAPGYAPAGYPPYPATPPGYGP-PGYGAPPSYGPP-----PGYG 91
P ++ P G P P PG+ AG P G G + PS G PGYG
Sbjct 6 HPDNVSPSGGPDRETPADPGHDVAGGGQDGWQAPDAGTFAGASSYPSQGSAQRSQYPGYG 65
Query 92 ----PPLGYPAAPPGC-GPPPGYGPPLGYGPPVAPG---------------AVKPGIIPL 131
PP+G P PP PGYG G G PG A KP IIPL
Sbjct 66 SYHTPPVGQPGYPPHSPSGQPGYGGASGPGYSPYPGAPGGQAGYGGYASVLAPKPSIIPL 125
Query 132 RPLTLSDIFNGAVGYIRANPKATL--GLTAMVVVTLQIISLVALF-------GPMTAFGD 182
RPL++ +I GA +RANP+A L M +V L + LF G + G+
Sbjct 126 RPLSIGEILGGAFESLRANPRAMFVPSLVVMSIVGLLSAGSLVLFLSRLDTPGVIAGSGE 185
Query 183 IVTGEP----DELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGE 238
I E D+L + VG + A G ++++ +A ++ G+L V V R + G ++ +
Sbjct 186 ITEAEAQASLDQLGSSFVGLF-AQLGVTVVLGTMATSIIVGLLIVTVSRTILGRKASLSD 244
Query 239 AWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAA---------ANEAAAALLGF 289
W + + R AL G LL ++ V + V I +G+ A A+E +A ++
Sbjct 245 VWQRTKPRAWALIGQTLLIQLILLVVTAVFVAIAAGIGWALLGNIITNGADEDSAGVIML 304
Query 290 PLLL------VVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRL 343
+L+ V+G+SL L L AP +VLE + ++E I+RS+ L R FWR++GIRL
Sbjct 305 AVLVILAVTAVLGLSLFALMCKLCLAPAALVLENIGVLEGISRSWTLTRGYFWRIVGIRL 364
Query 344 LTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSA 403
L+ L+V V A + ++ + + A D + + LS + ++ Q PF +
Sbjct 365 LSFLIVLVASQAASYGVSLITQGLV-YAAPDAVIVLM----ALSTLLNSLVQAAILPFDS 419
Query 404 GVVVLLYTDRRIRAEAFDLVLQ 425
V+ L+YTD R+R+E D+ L+
Sbjct 420 SVIALMYTDLRMRSEGLDVELR 441
>gi|29831604|ref|NP_826238.1| integral membrane protein [Streptomyces avermitilis MA-4680]
gi|29608720|dbj|BAC72773.1| putative integral membrane protein [Streptomyces avermitilis
MA-4680]
Length=449
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/333 (34%), Positives = 177/333 (54%), Gaps = 30/333 (9%)
Query 125 KPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQI--ISLVALFGPMTAFGD 182
KPG+IPLRPL + +I +GAV +R + LG++ V V QI I L L +A D
Sbjct 122 KPGVIPLRPLGVGEILDGAVSTMRMYWRTVLGISLAVAVFTQILVILLQGLVLDDSAGTD 181
Query 183 IV---TGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEA 239
+ + EL+ A+ G + G LL++ L ++ + +LT + RAV G +T EA
Sbjct 182 TLNDPSATVSELSRAM-GEALLNSGVVLLITLLGTIVATALLTTVTSRAVLGKSVTTAEA 240
Query 240 WAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSG------VAAAANEAAAALLGFPLLL 293
W R +LL LFGL L + ++GLA++ + V A A +A A+L +L
Sbjct 241 WRDARPQLLKLFGLTFL-----LPLIGLAIIAVGALPGVLVVLAGATDAGASL---AVLG 292
Query 294 VVGVSLAYLYVVLLFA---PVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVG 350
+ ++ L+V++ F+ P L+ LER I ++++RS LVR +WRV GI+LL ++
Sbjct 293 GLAAAVCALWVMIRFSLASPALM-LERQSIRKSMSRSAKLVRGSWWRVFGIQLLATIIAN 351
Query 351 VVGNAIAAPFMIV-----GEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGV 405
+V + + PF + G+ ++ + S G+ + +S +G IG ++T P +AGV
Sbjct 352 IVASIVVIPFAFLAAALSGDGISGILTS-GTGGLGWTFLIVSGVGSVIGAMLTFPITAGV 410
Query 406 VVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAP 438
VLLY D+RIR EA DL L G AP
Sbjct 411 TVLLYIDQRIRREALDLDLARAAGVQDYGSTAP 443
>gi|239988167|ref|ZP_04708831.1| putative integral membrane protein [Streptomyces roseosporus
NRRL 11379]
Length=403
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 130/396 (33%), Positives = 194/396 (49%), Gaps = 43/396 (10%)
Query 55 APGYAPAGYP----PYPATPP-GYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGC----GP 105
+PG AP+ P P+ P G GP G +P PPPG P P + PG
Sbjct 9 SPGSAPSDGKEKAIPRPSDPQDGSGPTGQWSPEQ--PPPGQWSPPSNPGSGPGTRPPAPG 66
Query 106 PPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTL 165
G G+ P P A KPG+IPLRPL+L +I +G+V +RA+ + LG + V V
Sbjct 67 WGGGPQRQGWAGP--PPAAKPGVIPLRPLSLGEILDGSVSALRAHWRTALGFSLTVSVIT 124
Query 166 QIISLVA----LFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGML 221
QI ++ L P + + E T S + L+S +A + + ++
Sbjct 125 QIAVILMQRYLLPEPTSIDPNATGAEALRQTADSARSTLISLAPASLLSMIATLFTASVV 184
Query 222 TVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAV---VILSGVAAA 278
TVI+ R+V G P T+ ++WA+ R R+L L GL +L A + A++ + + ++L A A
Sbjct 185 TVIISRSVLGRPTTLADSWAEARPRVLPLLGLTVLVAVIMAAIMAVGIGPGLLLGSEAGA 244
Query 279 ANEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRV 338
A ++L + VS A L AP L+ LER IV A+ RS LVR +WR
Sbjct 245 ALAFLGFAAACVVMLWLNVSFA------LAAPALM-LERQSIVAALRRSAKLVRGAWWRT 297
Query 339 LGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIG------VT 392
GI LT L+ ++ ++ PF + + +DG+ L G T ++G
Sbjct 298 FGILALTYLLTFLLTFLVSIPFTAIAVV------ADGTEVSDLFGGTAPSVGWPFLIVTG 351
Query 393 IGQIVTA----PFSAGVVVLLYTDRRIRAEAFDLVL 424
IG+++ + PF AGV+ LLY D+RIR EA DL L
Sbjct 352 IGEVIVSTLIYPFVAGVMALLYMDQRIRREALDLDL 387
>gi|297200107|ref|ZP_06917504.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
gi|197715416|gb|EDY59450.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
Length=440
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/313 (37%), Positives = 164/313 (53%), Gaps = 19/313 (6%)
Query 125 KPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMV-VVTLQIISLVALFGPMTAFGDI 183
KPG+IPLRPL + +I +GAV +R + LG++ V VVT ++ L+ F + G
Sbjct 117 KPGVIPLRPLGVGEILDGAVSTMRTYWRTVLGISLTVAVVTEVLVILLQGFVLNDSAGTE 176
Query 184 VTGEP----DELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGEA 239
+P DELT A+ G L+S + V + +LT + RAV G P+T GEA
Sbjct 177 ALNDPSASADELTHAL-GETMLGTTVVFLISLIGTVAATALLTTVTSRAVLGRPVTTGEA 235
Query 240 WAKVR---GRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVG 296
W R RL L L LL GV+AV L ++++ + A A+LG +L G
Sbjct 236 WRDARPQVPRLFGLIFLLLLITFGVLAVGALPGILVAAAGSNGGGLALAILG---ILGAG 292
Query 297 VSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAI 356
V +L + A ++LE+ IV++++RS LVR +WRVLGI+LL ++ +V +
Sbjct 293 VVALWLMIRFSLASPALMLEKQSIVKSMSRSTKLVRGSWWRVLGIQLLAGIIANIVAAIV 352
Query 357 AAPFMIV-----GEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYT 411
PF + GE V G + + +S IG IG ++T P +AGV VLLY
Sbjct 353 VLPFTFLAAALSGEGVGGFVNGTGDLGWTFL--IISGIGSVIGSMITFPITAGVTVLLYI 410
Query 412 DRRIRAEAFDLVL 424
D+RIR EA DL L
Sbjct 411 DQRIRREALDLEL 423
>gi|21221458|ref|NP_627237.1| integral membrane protein [Streptomyces coelicolor A3(2)]
gi|289771256|ref|ZP_06530634.1| integral membrane protein [Streptomyces lividans TK24]
gi|7799210|emb|CAB90926.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
gi|289701455|gb|EFD68884.1| integral membrane protein [Streptomyces lividans TK24]
Length=462
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 110/313 (36%), Positives = 159/313 (51%), Gaps = 16/313 (5%)
Query 123 AVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGD 182
A KPG+IPLRPL + +I +GAV +R + LG++ V + ++I ++ + G
Sbjct 132 AAKPGVIPLRPLGVGEILDGAVSTMRTYWRTVLGISLTVAIFTEVIVVLLQGLVLDDTGS 191
Query 183 IVTGEPD----ELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGE 238
+PD EL G + + + G L+S + VL + +LT + RAV G P+T GE
Sbjct 192 EALNDPDATLSEL-GDALAETTINSGVVFLISLIGTVLATALLTTVTSRAVLGRPVTTGE 250
Query 239 AWAKVRGRL--LALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAAL--LGFPLLLV 294
AW R ++ L L LL + G+ +L A A EA AL LGF L
Sbjct 251 AWRDARPQVLKLFGLILLLLLIVAGLVTAGMTPGLLV-TATAGGEAGVALTALGF---LA 306
Query 295 VGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGN 354
GV +L V A ++LE+ I +A+ RS LVR +WRV GI+LL ++ VV +
Sbjct 307 GGVVAVWLMVRFSLASPALMLEKQGIKKAMGRSVKLVRGSWWRVFGIQLLATVIANVVAS 366
Query 355 AIAAPFMIVGEIVTAVTAS---DGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYT 411
I PF + + DG+ + +S IG IG ++T P +AGV VLLY
Sbjct 367 IIVIPFAFLAATLGGDGVGGFLDGTGDLGWTFLVVSGIGSVIGSMITFPITAGVTVLLYI 426
Query 412 DRRIRAEAFDLVL 424
D+RIR EA DL L
Sbjct 427 DQRIRREALDLEL 439
>gi|116671259|ref|YP_832192.1| integral membrane protein [Arthrobacter sp. FB24]
gi|116611368|gb|ABK04092.1| integral membrane protein [Arthrobacter sp. FB24]
Length=479
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/379 (30%), Positives = 171/379 (46%), Gaps = 45/379 (11%)
Query 75 PPGYGAPPSYGPPPGYGPPLGYPAAPPGCGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPL 134
PP + AP + PPP P P PP G PG+ P PP KPGI+PLRPL
Sbjct 3 PPAWDAPAQWTPPP-TAPSGQPPWGPPYAGAQPGHAQPAYVAPP------KPGIVPLRPL 55
Query 135 TLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFGPMTAFGDIVTGEPDELTGA 194
+I +GA IR NP A + Q ++ T G++ E E G
Sbjct 56 MFGEILDGAFQTIRRNPAAM----LGAAMLAQTLA--------TVVGEVFAAE-TESRGQ 102
Query 195 VVGGWSASFG----------------ASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVGE 238
+G W A LVS+ ++L G++ V V R+V E
Sbjct 103 SLGLWLAGMAPPEMVNLGGGLLIGAALLGLVSFFISIVLQGVMVVPVARSVLNRRTGFKE 162
Query 239 AWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANE--AAAALLGFPLLLVVG 296
W R R+ AL L L+ ++A + AVV++ G A+ A +AL+ PL L
Sbjct 163 MWTLSRSRIGALLALGGLQ---ILAGIAFAVVLVGGTFLLADSMGATSALIIVPLFLGGI 219
Query 297 VSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNAI 356
++ + + L+ P IV+E +++ + RS+ L RH +WR+ GI L+ L++G++ +
Sbjct 220 ATILLVSIRLMVTPAAIVVEEQGVLDGLRRSWQLTRHNWWRIFGIVLVISLLIGIISQIV 279
Query 357 AAPF-MIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTA---PFSAGVVVLLYTD 412
P + G + + G R++ A + + + ++ A F V+ LLY D
Sbjct 280 QIPIGLATGGFSSVIAPHGGDDGQRVLSAVVGIASIIVTAVIGAVGYAFQTSVMGLLYMD 339
Query 413 RRIRAEAFDLVLQTGLEAG 431
R+R E DL LQ LE+G
Sbjct 340 LRMRKEGLDLALQRQLESG 358
>gi|291445151|ref|ZP_06584541.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
gi|291348098|gb|EFE75002.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
Length=397
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/382 (33%), Positives = 188/382 (50%), Gaps = 39/382 (10%)
Query 65 PYPATPP-GYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGC----GPPPGYGPPLGYGPPV 119
P P+ P G GP G +P PPPG P P + PG G G+ P
Sbjct 17 PRPSDPQDGSGPTGQWSPEQ--PPPGQWSPPSNPGSGPGTRPPAPGWGGGPQRQGWAGP- 73
Query 120 APGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVA----LFG 175
P A KPG+IPLRPL+L +I +G+V +RA+ + LG + V V QI ++ L
Sbjct 74 -PPAAKPGVIPLRPLSLGEILDGSVSALRAHWRTALGFSLTVSVITQIAVILMQRYLLPE 132
Query 176 PMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPIT 235
P + + E T S + L+S +A + + ++TVI+ R+V G P T
Sbjct 133 PTSIDPNATGAEALRQTADSARSTLISLAPASLLSMIATLFTASVVTVIISRSVLGRPTT 192
Query 236 VGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAV---VILSGVAAAANEAAAALLGFPLL 292
+ ++WA+ R R+L L GL +L A + A++ + + ++L A AA ++
Sbjct 193 LADSWAEARPRVLPLLGLTVLVAVIMAAIMAVGIGPGLLLGSEAGAALAFLGFAAACVVM 252
Query 293 LVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVV 352
L + VS A L AP L+ LER IV A+ RS LVR +WR GI LT L+ ++
Sbjct 253 LWLNVSFA------LAAPALM-LERQSIVAALRRSAKLVRGAWWRTFGILALTYLLTFLL 305
Query 353 GNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIG------VTIGQIVTA----PFS 402
++ PF + + +DG+ L G T ++G IG+++ + PF
Sbjct 306 TFLVSIPFTAIAVV------ADGTEVSDLFGGTAPSVGWPFLIVTGIGEVIVSTLIYPFV 359
Query 403 AGVVVLLYTDRRIRAEAFDLVL 424
AGV+ LLY D+RIR EA DL L
Sbjct 360 AGVMALLYMDQRIRREALDLDL 381
>gi|318081807|ref|ZP_07989116.1| integral membrane protein [Streptomyces sp. SA3_actF]
Length=294
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/311 (36%), Positives = 159/311 (52%), Gaps = 25/311 (8%)
Query 116 GPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLVALFG 175
GPP+AP +PGIIPLRPL L DI GA +R++ +A LG++ V + ++L
Sbjct 2 GPPLAP---RPGIIPLRPLDLGDILGGAFHMMRSHWRAVLGISLGTAVLVTGVTLAV--- 55
Query 176 PMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPIT 235
+ ++ A G + S + LVS L L GMLT + AV G P++
Sbjct 56 ------------RETMSDATTGTYGLSSLPAQLVSLLGSTLAVGMLTSVASHAVLGRPLS 103
Query 236 VGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLL-LV 294
+ AW + R R L GL +L VA++ A V++ + AA G +L ++
Sbjct 104 LKGAWREARPRFRKLLGLTVL-----VALVMAAAVLVCLIPGLLVNAAGGGDGLTILGVI 158
Query 295 VGVSLA-YLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVG 353
GV LA +LY+ L F+ +VLER IV+A+ RS LV +WR GI LLT ++ V
Sbjct 159 AGVVLAVWLYIRLSFSTAALVLERQGIVDAMRRSAKLVDGAWWRTFGILLLTGVIASVAQ 218
Query 354 NAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDR 413
IA PF ++G +V + S T L + +G+ P +AGV VLLY D+
Sbjct 219 FVIALPFDVLGLLVGFTDSEGSSSTGGLAFSLFVGVGMIASTTFAFPLTAGVTVLLYIDQ 278
Query 414 RIRAEAFDLVL 424
RIR E+ DL L
Sbjct 279 RIRRESLDLDL 289
>gi|269957299|ref|YP_003327088.1| hypothetical protein Xcel_2515 [Xylanimonas cellulosilytica DSM
15894]
gi|269305980|gb|ACZ31530.1| hypothetical protein Xcel_2515 [Xylanimonas cellulosilytica DSM
15894]
Length=422
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 113/338 (34%), Positives = 173/338 (52%), Gaps = 23/338 (6%)
Query 105 PPPGYGPPLGY--GPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVV 162
P P P G+ G P A KPGI+PLRPLTL +I++GA G +R NP LGL +V+
Sbjct 81 PAPQQQTPYGWPAGSPYQSAATKPGIVPLRPLTLGEIYDGAFGAVRHNPAVMLGLATLVL 140
Query 163 VTLQII----------SLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASL---LV 209
+ ++ + +LFGP+ F D E E G G + +GA+ L
Sbjct 141 LIATVVGVLVGQLLVPAFTSLFGPI--FDDPAFQESGESLGITAGSIAQLYGAASGMGLT 198
Query 210 SWLAGVLLSGMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEA-AGVVAVLGLA 268
+ LAG +++G+LTV V ++V G + V + W +V R L G +LL+ A +V +GL
Sbjct 199 TLLAGPIVNGILTVSVSQSVLGDKVPVRQVWERVAPRAWLLVGWSLLQGFALIVLAVGLV 258
Query 269 VVILSGVAAAANEAAAALLGFPLLLVVGV--SLAYLYVVLLFAPVLIVLERLPIVEAITR 326
+++ V A + + A ++L +G LA+L + LL P + LE + + R
Sbjct 259 ILVSVAVVAVSQVSGGAAGALAIVLAIGSVGVLAWLAIRLLLVPPALALEGARLWATVRR 318
Query 327 SFALVRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATL 386
++ L R FWR LGI LL ++VGV+ ++ P +G + A T +VT L+ +
Sbjct 319 AWLLTRGSFWRTLGIYLLASVIVGVISQVVSVPLTFIGGAL-AGTGDPATVTGTLI--IV 375
Query 387 SAIGVTIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVL 424
S I + + F AGV LLY D R+R E D+ L
Sbjct 376 SIIAGVVAAAIQTIFLAGVTALLYIDLRMRREGLDVQL 413
>gi|317123407|ref|YP_004097519.1| hypothetical protein Intca_0235 [Intrasporangium calvum DSM 43043]
gi|315587495|gb|ADU46792.1| hypothetical protein Intca_0235 [Intrasporangium calvum DSM 43043]
Length=374
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/319 (34%), Positives = 163/319 (52%), Gaps = 14/319 (4%)
Query 125 KPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISL---VALFGPMTAFG 181
+PGIIPLRPLTL +I++G +R NP ATLGL + + + + L G
Sbjct 61 RPGIIPLRPLTLGEIWSGVFATVRGNPGATLGLALLTTALALVPATALAIWLAGQDLGLA 120
Query 182 DIVTGEPDELTGAVVGGWSASFGASL---LVSWLAGVLLSGMLTVIVGRAVFGSPITVGE 238
+++ +P G +S + AS L W+ +LL + +++G A+ G +T+G+
Sbjct 121 AVLSADPFGDPNLSAGAYSDATLASYVPGLAMWVVSLLLPLFVALVIGHAIQGRKVTLGQ 180
Query 239 AWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAALLGFPLLLVVGVS 298
W + RGR+L G LL A V + VV+L+ A+ A + +LLVVG +
Sbjct 181 TWQQTRGRILPAIGTTLLIVAMFAGV--IVVVLLAAAGTWASGDGAGSVALTVLLVVGFA 238
Query 299 LA--YLYVVLLFAPVLIVLERLPIVEAITRSFALV-RHGFWRVLGIRLLTVLVVGVVGNA 355
A YL+V + FA ++VLE A+ RS+ L FWR+ GIRLLT +V +VG+
Sbjct 239 AAAVYLWVKVSFAVTIVVLESAGPRRAVRRSWGLTGGRPFWRIFGIRLLTAIVASIVGSI 298
Query 356 IAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYTDRRI 415
+A P +G I + +M V A+ + + ++ PF +GV LLY D+RI
Sbjct 299 VATP---IGLIALFAADDPDATSMAWVLPLTQAVSLLVQGVLVTPFVSGVDSLLYVDQRI 355
Query 416 RAEAFDLVLQTGLEAGPAG 434
R E D+ L L P+G
Sbjct 356 RREGLDVQLMQQLPTSPSG 374
>gi|343523441|ref|ZP_08760402.1| putative membrane protein [Actinomyces sp. oral taxon 175 str.
F0384]
gi|343399658|gb|EGV12179.1| putative membrane protein [Actinomyces sp. oral taxon 175 str.
F0384]
Length=439
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 126/395 (32%), Positives = 194/395 (50%), Gaps = 48/395 (12%)
Query 71 PGYGPPGYGAPPSYGPPPGYG----PPLGYPAAPPGCGP-------------PPGYGPPL 113
P Y PG A P Y PGYG PP+G P P G P PG
Sbjct 48 PSYPAPGSAAGPQY---PGYGGYQTPPVGQPGYPGGSVPGSAPYPGAPGYPGAPGGPGYP 104
Query 114 GYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATL--GLTAMVVVTLQIISLV 171
GYG + A KP IIPLRPL++ +I GA +RANPKA L M + L V
Sbjct 105 GYGGYTSALAPKPSIIPLRPLSIGEILGGAFESLRANPKAMFIPSLVVMGITGLLSAGSV 164
Query 172 ALFGPMTAFGDIVTGEPD------ELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIV 225
ALF D+ +G+ + + G+ + G G + ++S +A ++ G+L V V
Sbjct 165 ALFMSRLGLTDLTSGKVEFSETDLDSIGSSLVGLLVQLGVTSVLSMMATSIIIGLLIVTV 224
Query 226 GRAVFGSPITVGEAWAKVRGRLLALFG--------LALLEAAGVVAVLGLAVVILSGV-A 276
R + G ++G+ W + R R+ AL G LA++ A V +G+ +L V A
Sbjct 225 SRTILGRKASLGDVWQRTRPRVWALIGQTLLIELILAVITAVFVAVAIGIGWALLGNVIA 284
Query 277 AAANEAAAALLGFPLLLVVGV------SLAYLYVVLLFAPVLIVLERLPIVEAITRSFAL 330
A+E +A L+++ + ++ L L AP +VLE + ++E I+RS+ L
Sbjct 285 NGASEDSAGTFVVVFLVLLALLIVLGLAVFALMCKLCLAPAALVLENIGVMEGISRSWTL 344
Query 331 VRHGFWRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIG 390
R FWR++GIRLL+ ++V ++ IV + + V A D ++ + LV +TL +
Sbjct 345 TRGYFWRIVGIRLLSFIIVFFATQIVSQGVSIVMQGLVYV-APDMTLAI-LVASTLLS-- 400
Query 391 VTIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVLQ 425
++ Q PF + VV L+YTD R+R+E D+ L+
Sbjct 401 -SLIQAAILPFDSAVVALMYTDLRMRSEGLDVELR 434
>gi|158317587|ref|YP_001510095.1| hypothetical protein Franean1_5843 [Frankia sp. EAN1pec]
gi|158112992|gb|ABW15189.1| putative integral membrane protein [Frankia sp. EAN1pec]
Length=394
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 131/382 (35%), Positives = 179/382 (47%), Gaps = 74/382 (19%)
Query 66 YPATPPGYGPPGYGAPPSYGPPPGYGPPLGYPAAPPGC-----------------GPPPG 108
+PA P G+ PG + PS P PG G P GY P GP G
Sbjct 53 WPA-PGGWQAPG--SDPSAAPVPGQGAPPGYVPNSPNSGYGPGGYGPHGGYGQQPGPARG 109
Query 109 YGP--PLGYG-PPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTL 165
YG P G+G PP+AP KPG+IPLRPL + +I +G IR+NP ATLGLT +
Sbjct 110 YGAWGPNGWGGPPIAP---KPGVIPLRPLAVGEILDGTFATIRSNPGATLGLTLGATAVV 166
Query 166 QIISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIV 225
+ IS VA A ++ LT + G A+L G+ LSG+L V+V
Sbjct 167 ETISTVAAI----AAEEMSNTAATVLTLLLFG-----LNAAL------GIFLSGVLAVVV 211
Query 226 GRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGVAAAANEAAAA 285
A G IT G+A +V RL L +L LAV +LS + A
Sbjct 212 SEATLGGRITAGDAVRRVTPRLGGLL------------MLTLAVTLLSALGLVA------ 253
Query 286 LLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLT 345
L+VG + +Y+ L A VLE +A+ RS+ LV+ +WR LG+ LL+
Sbjct 254 -------LIVGAVVVAVYLSL--ATPAYVLEAQSTGDALRRSWRLVKGSWWRTLGVLLLS 304
Query 346 VLVVGVVGNAIAAPFMIVGEIVTAVTASDGSV---TMRLVGATLSAIGVTIGQIVTAPFS 402
V GV+ A P + I+ + + GS+ + + G ++AIG + V P
Sbjct 305 AAVGGVLMLIFAIPTSV---ILMSSEQTFGSLVEGDLTVAGHIVNAIGSLLATTVATPVL 361
Query 403 AGVVVLLYTDRRIRAEAFDLVL 424
+G VVLLY DRRIR E D+ L
Sbjct 362 SGAVVLLYIDRRIRREGLDVTL 383
>gi|290959915|ref|YP_003491097.1| protein [Streptomyces scabiei 87.22]
gi|260649441|emb|CBG72556.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length=444
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/328 (36%), Positives = 165/328 (51%), Gaps = 17/328 (5%)
Query 123 AVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQI--ISLVALFGPMTAF 180
A KPG+IPLRPL + +I +GAV +R + + LG++ V V QI I L TA
Sbjct 116 AAKPGVIPLRPLGIGEILDGAVSTMRTHWRTVLGISLAVAVVTQIGVILLQGFVLDDTAS 175
Query 181 GDIV---TGEPDELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIVGRAVFGSPITVG 237
D + T P EL G + S +++S L ++ + +LT + RAV G +T
Sbjct 176 ADALNDPTTTPGEL-GRALRDTLLSTSVVMVISLLGTIIATALLTTVTSRAVLGRSVTTA 234
Query 238 EAWAKVRGRLLALFGLALLEAAGVVAVLGLAVVILSGV--AAAANEAAAALLGFPLLLVV 295
EAW R +LL L GL +L V V+ AV +L GV A + A LL L
Sbjct 235 EAWRDARPQLLRLAGLTVLLLVIAVLVM--AVGVLPGVLLATGGSTGAGVLLALLGGLGA 292
Query 296 GVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRLLTVLVVGVVGNA 355
V +L + A ++LE+ + +++ RS LVR +WRVLGI+LL ++ +V +
Sbjct 293 FVLTVWLMIRFSLASPALMLEKQGVRKSLGRSGKLVRGSWWRVLGIQLLAAIIAYIVASI 352
Query 356 IAAPFMIVGEIVTAVTAS----DGSVTMRLVGATLSAIGVTIGQIVTAPFSAGVVVLLYT 411
+ PF G + S G T+ +S +G IG +T P SAGV VLLY
Sbjct 353 VVIPFSFAGAALDGDGISGLLATGGTTLGWTYLVISGVGAVIGSTLTFPISAGVTVLLYI 412
Query 412 DRRIRAEAFDLVLQTGLEAGPAG-GPAP 438
D+RIR EA DL L G AG G G AP
Sbjct 413 DQRIRREALDLEL--GRAAGLQGYGDAP 438
>gi|291453739|ref|ZP_06593129.1| integral membrane protein [Streptomyces albus J1074]
gi|291356688|gb|EFE83590.1| integral membrane protein [Streptomyces albus J1074]
Length=426
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 128/403 (32%), Positives = 191/403 (48%), Gaps = 32/403 (7%)
Query 68 ATPPGYGPPGYGAPPSY----GPPPGYGPPLGYPA-------------APPGCGPPPGYG 110
ATP G G GA PS PPPG G A G PP G
Sbjct 25 ATPEGAEGTGPGASPSKWSKEQPPPGQWSAPGTTGSGAGDSGGGRRTRAESGDRTPPSGG 84
Query 111 PPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISL 170
G G P A KPG+IPLRPL + +I +GAV +R + + LG++ M+ V Q++ +
Sbjct 85 GWGGGGWTQPPAAAKPGVIPLRPLGVGEILDGAVATLRTHWRTVLGISLMIAVATQVVLI 144
Query 171 VALFGPMTAFGDIVTGEP-----DELTGAVVGGWSASFGASLLVSWLAGVLLSGMLTVIV 225
+ + D+ E DEL A+ G S L+ L ++ + +LT++
Sbjct 145 LLQRFVLRDSVDVAALEDPSATTDELLSAMRGALLDSGLVLLVSL-LGTIVATALLTMVT 203
Query 226 GRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAVV--ILSGVAAAANEAA 283
RAV G P+++ +AW R +L L GL LL + V+ +A+V +L G+ + + AA
Sbjct 204 SRAVLGKPVSLSDAWRDARPQLARLAGLTLLLPLIAIGVVTVAMVPGVLLGMVSGSEGAA 263
Query 284 AALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGFWRVLGIRL 343
A L L +L + + ++LE+ +V+A+ RS LVR +WRV GI+L
Sbjct 264 ALL--ALGALGGAGVAVWLTIRFSLSSAALMLEKQGVVKAMRRSAKLVRGSWWRVFGIQL 321
Query 344 LTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVG-----ATLSAIGVTIGQIVT 398
L L+V +V + I PF V ++T + + M + ++ +G IG ++T
Sbjct 322 LAQLLVMIVSSVILLPFSRVAAVITGESGASALDEMVVTNFGWTYLIITGVGSVIGAMLT 381
Query 399 APFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAGPAGGPAPVES 441
P AGV VLLY D+RIR EA D+ L A P P S
Sbjct 382 LPIVAGVTVLLYIDQRIRREALDVELTRAAAAQSQESPPPSAS 424
>gi|302544905|ref|ZP_07297247.1| putative membrane protein [Streptomyces hygroscopicus ATCC 53653]
gi|302462523|gb|EFL25616.1| putative membrane protein [Streptomyces himastatinicus ATCC 53653]
Length=348
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 120/340 (36%), Positives = 177/340 (53%), Gaps = 16/340 (4%)
Query 103 CGPPPGYGPPLGYGPPVAPGAVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVV 162
GP G G G+ P P A +PG+IPLRPL +S+I +GAV +R + + +G++ V
Sbjct 13 AGPANGGGWGTGWRQP--PPAPRPGVIPLRPLAVSEILDGAVATMRTHWRTVIGISLAVS 70
Query 163 VTLQ-IISLVALFGPMTAFGDIVTGEPDELTGAVVGGWSASFGAS---LLVSWLAGVLLS 218
V Q +I++V T G PD G + + G+S +LV L ++ +
Sbjct 71 VVAQGLITVVTGLWFRTTSGTGTVDNPDPTLGEALETVRNALGSSSVTMLVGVLGTIVTT 130
Query 219 GMLTVIVGRAVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLGLAV---VILSGV 275
+LT++ RAV G P++ GEAW R RLL L GL LL A AV+GL + ++L+ V
Sbjct 131 ALLTMVTARAVLGRPVSTGEAWGGARPRLLQLCGLLLLIPAIAAAVIGLGMAPGMLLAAV 190
Query 276 AAAANEAAAALLGFPLLLVVGVSLAYLYVVLLFAPVLIVLERLPIVEAITRSFALVRHGF 335
+ AA A L GV++ +L+V A ++LE+ I+ A+ RS LVR +
Sbjct 191 GVGSEGAALAS--LGALAGTGVAI-WLWVRFSLAAPALMLEKQGIISALRRSAKLVRGAW 247
Query 336 WRVLGIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASD----GSVTMRLVGATLSAIGV 391
WRV GI+LL++++V +V + P V +A D SV++ + IG
Sbjct 248 WRVFGIQLLSIVLVFIVAAIVEVPTSAVAMAFGGDSAIDYLSGESVSVGWAFLIVVGIGG 307
Query 392 TIGQIVTAPFSAGVVVLLYTDRRIRAEAFDLVLQTGLEAG 431
I +T P SAGV LLY D+RIR EA DL L + G
Sbjct 308 VISSAITFPISAGVTALLYMDQRIRREALDLELARAADCG 347
>gi|119718127|ref|YP_925092.1| hypothetical protein Noca_3907 [Nocardioides sp. JS614]
gi|119538788|gb|ABL83405.1| conserved hypothetical protein [Nocardioides sp. JS614]
Length=362
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/327 (35%), Positives = 170/327 (52%), Gaps = 26/327 (7%)
Query 116 GPPVAPG----AVKPGIIPLRPLTLSDIFNGAVGYIRANPKATLGLTAMVVVTLQIISLV 171
P VAPG A KPG +PLRPL L D+++ A IR NPKAT+G +A++V + + V
Sbjct 39 SPVVAPGMLGAAHKPGAMPLRPLALGDMYDAAFRIIRFNPKATVG-SAVLVAAVAMGVPV 97
Query 172 ALFGPMTAFGDIVTGEP-DELTGAVVGGWSASFGASLLVSWLAGV---LLSGMLTVIVGR 227
+ +T D+ + D+L+ A V G++ S G+ L + L V L++GM+ +
Sbjct 98 LVTALLTLVVDLSAAQSGDDLSTAEVVGYAGSIGSLFLGTALQSVGSILVTGMVAHVTAA 157
Query 228 AVFGSPITVGEAWAKVRGRLLALFGLALLEAAGVVAVLG-------LAVVILSGVAAAAN 280
A G +T+GEAWA RG L GL LL + +L LAVV+L A
Sbjct 158 AAIGRRLTLGEAWAATRGSRWRLVGLTLLLGLMLAGLLLAYGLLWILAVVLLPTWAIVLF 217
Query 281 EAAAALLGFPLLLVVGVSLAYLYVVLLFAPV-LIVLERLPIVEAITRSFALVRHGFWRVL 339
+L P L + ++ + + PV +++ER ++ AI R F L R FWR
Sbjct 218 ----GVLSVPAFLAFA---CWFWIRVYYLPVPALMIERTRVLAAIGRGFRLTRRQFWRTF 270
Query 340 GIRLLTVLVVGVVGNAIAAPFMIVGEIVTAVTASDGSVTMRLVGATLSAIGVTIGQIVTA 399
GI LLTV+V G+ G+ ++APF I +++ A + LV LSAI +
Sbjct 271 GIALLTVIVTGIAGSMLSAPFTIAAQLLPLAMAESRYAVLVLV--VLSAIATVVQTAFVT 328
Query 400 PFSAGVVVLLYTDRRIRAEAFDLVLQT 426
PF++ V + Y D+RIR EA+D+ L T
Sbjct 329 PFTSAVTSVQYLDQRIRKEAYDVELMT 355
Lambda K H
0.321 0.143 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 936947369512
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40