BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3690

Length=217
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15843308|ref|NP_338345.1|  hypothetical protein MT3792 [Mycoba...   442    1e-122
gi|15610826|ref|NP_218207.1|  hypothetical protein Rv3690 [Mycoba...   440    6e-122
gi|340628663|ref|YP_004747115.1|  hypothetical protein MCAN_37111...   439    1e-121
gi|240172917|ref|ZP_04751576.1|  hypothetical protein MkanA1_2662...   354    5e-96 
gi|118619433|ref|YP_907765.1|  hypothetical protein MUL_4273 [Myc...   328    3e-88 
gi|296166775|ref|ZP_06849197.1|  integral membrane protein [Mycob...   307    8e-82 
gi|254820807|ref|ZP_05225808.1|  hypothetical protein MintA_12813...   305    3e-81 
gi|342861947|ref|ZP_08718591.1|  hypothetical protein MCOL_23770 ...   276    2e-72 
gi|41406459|ref|NP_959295.1|  hypothetical protein MAP0361c [Myco...   263    1e-68 
gi|118462573|ref|YP_879699.1|  hypothetical protein MAV_0414 [Myc...   255    3e-66 
gi|118473014|ref|YP_890436.1|  integral membrane protein [Mycobac...   236    2e-60 
gi|315446332|ref|YP_004079211.1|  hypothetical protein Mspyr1_483...   233    2e-59 
gi|108801821|ref|YP_642018.1|  hypothetical protein Mmcs_4858 [My...   227    1e-57 
gi|169627495|ref|YP_001701144.1|  hypothetical protein MAB_0391c ...   220    1e-55 
gi|120406400|ref|YP_956229.1|  hypothetical protein Mvan_5453 [My...   216    2e-54 
gi|145221931|ref|YP_001132609.1|  hypothetical protein Mflv_1339 ...   211    7e-53 
gi|271962951|ref|YP_003337147.1|  hypothetical protein Sros_1410 ...   157    9e-37 
gi|333992609|ref|YP_004525223.1|  hypothetical protein JDM601_396...   150    1e-34 
gi|300783066|ref|YP_003763357.1|  hypothetical protein AMED_1140 ...   115    6e-24 
gi|297194036|ref|ZP_06911434.1|  integral membrane protein [Strep...   110    1e-22 
gi|72162897|ref|YP_290554.1|  integral membrane protein [Thermobi...   103    2e-20 
gi|328882805|emb|CCA56044.1|  putative integral membrane protein ...   100    1e-19 
gi|345000057|ref|YP_004802911.1|  putative integral membrane prot...  95.5    5e-18 
gi|29831603|ref|NP_826237.1|  integral membrane protein [Streptom...  94.4    9e-18 
gi|296394410|ref|YP_003659294.1|  hypothetical protein Srot_2007 ...  94.4    9e-18 
gi|302560330|ref|ZP_07312672.1|  integral membrane protein [Strep...  93.6    2e-17 
gi|317508342|ref|ZP_07966017.1|  hypothetical protein HMPREF9336_...  92.8    3e-17 
gi|297200108|ref|ZP_06917505.1|  integral membrane protein [Strep...  89.0    4e-16 
gi|311896325|dbj|BAJ28733.1|  hypothetical protein KSE_29220 [Kit...  87.0    1e-15 
gi|333920343|ref|YP_004493924.1|  integral membrane protein [Amyc...  87.0    2e-15 
gi|297562677|ref|YP_003681651.1|  integral membrane protein [Noca...  86.7    2e-15 
gi|291439272|ref|ZP_06578662.1|  integral membrane protein [Strep...  86.3    3e-15 
gi|302551836|ref|ZP_07304178.1|  integral membrane protein [Strep...  85.9    4e-15 
gi|326778964|ref|ZP_08238229.1|  putative integral membrane prote...  83.2    2e-14 
gi|284029585|ref|YP_003379516.1|  hypothetical protein Kfla_1622 ...  83.2    3e-14 
gi|21221459|ref|NP_627238.1|  integral membrane protein [Streptom...  82.4    4e-14 
gi|289771255|ref|ZP_06530633.1|  integral membrane protein [Strep...  82.0    5e-14 
gi|290959914|ref|YP_003491096.1|  protein [Streptomyces scabiei 8...  80.5    2e-13 
gi|239988168|ref|ZP_04708832.1|  putative integral membrane prote...  79.3    3e-13 
gi|256396697|ref|YP_003118261.1|  integral membrane protein [Cate...  79.3    4e-13 
gi|312199841|ref|YP_004019902.1|  integral membrane protein [Fran...  77.4    1e-12 
gi|329935950|ref|ZP_08285751.1|  integral membrane protein [Strep...  76.3    3e-12 
gi|288916535|ref|ZP_06410912.1|  hypothetical protein FrEUN1fDRAF...  74.7    1e-11 
gi|182438313|ref|YP_001826032.1|  putative integral membrane prot...  74.3    1e-11 
gi|294629685|ref|ZP_06708245.1|  integral membrane protein [Strep...  74.3    1e-11 
gi|269128243|ref|YP_003301613.1|  hypothetical protein Tcur_4046 ...  72.8    3e-11 
gi|158317588|ref|YP_001510096.1|  hypothetical protein Franean1_5...  71.6    7e-11 
gi|323356979|ref|YP_004223375.1|  hypothetical protein MTES_0531 ...  71.6    7e-11 
gi|111220757|ref|YP_711551.1|  putative integral membrane protein...  71.2    1e-10 
gi|227497998|ref|ZP_03928174.1|  integral membrane protein [Actin...  70.5    2e-10 


>gi|15843308|ref|NP_338345.1| hypothetical protein MT3792 [Mycobacterium tuberculosis CDC1551]
 gi|253800734|ref|YP_003033735.1| hypothetical protein TBMG_03732 [Mycobacterium tuberculosis KZN 
1435]
 gi|254233187|ref|ZP_04926513.1| hypothetical protein TBCG_03614 [Mycobacterium tuberculosis C]
 gi|13883668|gb|AAK48159.1| hypothetical protein MT3792 [Mycobacterium tuberculosis CDC1551]
 gi|124602980|gb|EAY61255.1| hypothetical protein TBCG_03614 [Mycobacterium tuberculosis C]
 gi|253322237|gb|ACT26840.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435]
Length=233

 Score =  442 bits (1138),  Expect = 1e-122, Method: Compositional matrix adjust.
 Identities = 217/217 (100%), Positives = 217/217 (100%), Gaps = 0/217 (0%)

Query  1    VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV  60
            VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV
Sbjct  17   VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV  76

Query  61   LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH  120
            LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH
Sbjct  77   LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH  136

Query  121  RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ  180
            RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ
Sbjct  137  RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ  196

Query  181  GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR  217
            GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR
Sbjct  197  GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR  233


>gi|15610826|ref|NP_218207.1| hypothetical protein Rv3690 [Mycobacterium tuberculosis H37Rv]
 gi|31794861|ref|NP_857354.1| hypothetical protein Mb3715 [Mycobacterium bovis AF2122/97]
 gi|121639604|ref|YP_979828.1| hypothetical protein BCG_3749 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 72 more sequence titles
 Length=217

 Score =  440 bits (1132),  Expect = 6e-122, Method: Compositional matrix adjust.
 Identities = 216/217 (99%), Positives = 217/217 (100%), Gaps = 0/217 (0%)

Query  1    VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV  60
            +PSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV
Sbjct  1    MPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV  60

Query  61   LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH  120
            LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH
Sbjct  61   LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH  120

Query  121  RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ  180
            RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ
Sbjct  121  RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ  180

Query  181  GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR  217
            GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR
Sbjct  181  GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR  217


>gi|340628663|ref|YP_004747115.1| hypothetical protein MCAN_37111 [Mycobacterium canettii CIPT 
140010059]
 gi|340006853|emb|CCC46042.1| putative conserved membrane protein [Mycobacterium canettii CIPT 
140010059]
Length=217

 Score =  439 bits (1129),  Expect = 1e-121, Method: Compositional matrix adjust.
 Identities = 215/217 (99%), Positives = 217/217 (100%), Gaps = 0/217 (0%)

Query  1    VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV  60
            +PSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV
Sbjct  1    MPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV  60

Query  61   LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH  120
            LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH
Sbjct  61   LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH  120

Query  121  RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ  180
            RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPG+Q
Sbjct  121  RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGSQ  180

Query  181  GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR  217
            GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR
Sbjct  181  GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR  217


>gi|240172917|ref|ZP_04751576.1| hypothetical protein MkanA1_26627 [Mycobacterium kansasii ATCC 
12478]
Length=216

 Score =  354 bits (909),  Expect = 5e-96, Method: Compositional matrix adjust.
 Identities = 172/217 (80%), Positives = 195/217 (90%), Gaps = 1/217 (0%)

Query  1    VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV  60
            +PSIDIDR+AAHQAAQ ELDKPIYPK SL+   +DW++EQLYR+LEKG+S+ GGWFT+TV
Sbjct  1    MPSIDIDRDAAHQAAQHELDKPIYPKPSLSTAFSDWLNEQLYRLLEKGASVSGGWFTLTV  60

Query  61   LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH  120
            L IL +IAV  AV IARRTMRTNRGGDYQLFDAGQLTAAQHR+TAE++AA+GNWAAAIRH
Sbjct  61   LFILAVIAVIVAVHIARRTMRTNRGGDYQLFDAGQLTAAQHRATAEAFAAQGNWAAAIRH  120

Query  121  RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ  180
            RL+AVARELEETG+LNPA GRTANELA+DAG  LPHLAGEL +AATAFNDVTYGERPGTQ
Sbjct  121  RLRAVARELEETGVLNPAPGRTANELATDAGAALPHLAGELVRAATAFNDVTYGERPGTQ  180

Query  181  GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR  217
             +YQ+IADLDDHLRSR+ A  SAV+ PA  DSWAQVR
Sbjct  181  DSYQLIADLDDHLRSRAHA-SSAVERPAAPDSWAQVR  216


>gi|118619433|ref|YP_907765.1| hypothetical protein MUL_4273 [Mycobacterium ulcerans Agy99]
 gi|183985169|ref|YP_001853460.1| hypothetical protein MMAR_5200 [Mycobacterium marinum M]
 gi|118571543|gb|ABL06294.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
 gi|183178495|gb|ACC43605.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=216

 Score =  328 bits (841),  Expect = 3e-88, Method: Compositional matrix adjust.
 Identities = 175/217 (81%), Positives = 196/217 (91%), Gaps = 1/217 (0%)

Query  1    VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV  60
            +PSIDIDR+AAHQAAQRELDKPIYPK SL++ L DWI+E LYR+LEKGSS+ GGWFTITV
Sbjct  1    MPSIDIDRDAAHQAAQRELDKPIYPKSSLSQHLNDWINELLYRLLEKGSSVSGGWFTITV  60

Query  61   LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH  120
            L+ILL+IAV  A+ IARRT+RTNRGGDYQLFDAGQLTAAQHR+TA+ YAA+GNWAAAIRH
Sbjct  61   LVILLVIAVVVAINIARRTLRTNRGGDYQLFDAGQLTAAQHRATAQGYAADGNWAAAIRH  120

Query  121  RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ  180
            RL+AVARELEETG+LNPA GRTANELA+DAG+VLP+LAGEL QAA AFNDVTYGERPGT+
Sbjct  121  RLRAVARELEETGVLNPAPGRTANELANDAGDVLPYLAGELAQAAAAFNDVTYGERPGTE  180

Query  181  GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR  217
             AYQ+IADLDDHLRSRS A  S V  PA  DSWAQVR
Sbjct  181  AAYQLIADLDDHLRSRSTASPS-VGRPAPSDSWAQVR  216


>gi|296166775|ref|ZP_06849197.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC 
BAA-614]
 gi|295897872|gb|EFG77456.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC 
BAA-614]
Length=217

 Score =  307 bits (786),  Expect = 8e-82, Method: Compositional matrix adjust.
 Identities = 157/217 (73%), Positives = 188/217 (87%), Gaps = 0/217 (0%)

Query  1    VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV  60
            +PSIDIDR+AAHQAAQ EL+KPIY K S T+++ +W++E ++R+L+K +S+PGGW T TV
Sbjct  1    MPSIDIDRDAAHQAAQDELNKPIYSKGSATEQIAEWLNETIFRLLQKAASLPGGWLTATV  60

Query  61   LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH  120
            L+ILL +A+  AV +ARRTMRTNRGGDY+LF+A QLTAAQHR+TAE +AA+G+WAAAIRH
Sbjct  61   LVILLGVALAVAVHVARRTMRTNRGGDYRLFEAAQLTAAQHRATAEDFAAQGDWAAAIRH  120

Query  121  RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ  180
            RL+AVAR+LEETG+LNPA GRTANELASDAG  LPHLA ELTQ ATAFNDVTYGE+PGTQ
Sbjct  121  RLRAVARQLEETGVLNPAPGRTANELASDAGAALPHLADELTQGATAFNDVTYGEQPGTQ  180

Query  181  GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR  217
             AYQ+IADLDDHLRSR+ AV     HPA  DSWAQVR
Sbjct  181  SAYQLIADLDDHLRSRAAAVAPGPAHPAAPDSWAQVR  217


>gi|254820807|ref|ZP_05225808.1| hypothetical protein MintA_12813 [Mycobacterium intracellulare 
ATCC 13950]
Length=217

 Score =  305 bits (781),  Expect = 3e-81, Method: Compositional matrix adjust.
 Identities = 151/217 (70%), Positives = 178/217 (83%), Gaps = 0/217 (0%)

Query  1    VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV  60
            +PSIDIDR+AAH+AAQ EL+KPIY K S   +  DW+++ +YR+L+K +++PGGWFT TV
Sbjct  1    MPSIDIDRDAAHRAAQDELNKPIYSKGSSADQFLDWLNDLIYRMLQKTATVPGGWFTATV  60

Query  61   LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH  120
            LLILL IAV  A  +ARRTMR  RGGD  LF+A QLTAAQHR+TAESYAAEG+WAAAIRH
Sbjct  61   LLILLAIAVFVAFHVARRTMRARRGGDQLLFEAAQLTAAQHRATAESYAAEGDWAAAIRH  120

Query  121  RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ  180
            RL+AVAR+LEETG+L  A GRTANELA DAG  LPHLA EL++AATAFNDVTYGE+PGT+
Sbjct  121  RLRAVARQLEETGVLAAAPGRTANELARDAGTALPHLADELSEAATAFNDVTYGEQPGTR  180

Query  181  GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR  217
             AYQMIADLDDHLRSR     +    PAV +SWAQVR
Sbjct  181  AAYQMIADLDDHLRSRWQGAPAEAGRPAVPESWAQVR  217


>gi|342861947|ref|ZP_08718591.1| hypothetical protein MCOL_23770 [Mycobacterium colombiense CECT 
3035]
 gi|342130487|gb|EGT83796.1| hypothetical protein MCOL_23770 [Mycobacterium colombiense CECT 
3035]
Length=217

 Score =  276 bits (706),  Expect = 2e-72, Method: Compositional matrix adjust.
 Identities = 150/220 (69%), Positives = 177/220 (81%), Gaps = 6/220 (2%)

Query  1    VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV  60
            +PSID+DR+AAH+AAQ EL+KPIY K S  +   DW+++ +YR+L+K S++PGGW T TV
Sbjct  1    MPSIDVDRDAAHRAAQDELNKPIYSKGSAREHFVDWLNDLIYRLLQKTSALPGGWLTATV  60

Query  61   LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH  120
            L ILL IAV A + + RRTMRT RGGDY LF+A QLTAAQHR+TAES+AAEG+WAAAIRH
Sbjct  61   LFILLAIAVIAGIYVLRRTMRTRRGGDYALFEAAQLTAAQHRATAESFAAEGDWAAAIRH  120

Query  121  RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ  180
            RL+AVAR+LEETG+L  A GRTANELA DAG  LPHLAGELTQAATAFNDVTYGE+PGTQ
Sbjct  121  RLRAVARQLEETGVLTAAPGRTANELARDAGAALPHLAGELTQAATAFNDVTYGEQPGTQ  180

Query  181  GAYQMIADLDDHLRSR---SPAVVSAVQHPAVFDSWAQVR  217
             AY+MIA+LDDHLRSR    P        P   +SWAQVR
Sbjct  181  DAYRMIAELDDHLRSRWQGGPLEPGRAHAP---ESWAQVR  217


>gi|41406459|ref|NP_959295.1| hypothetical protein MAP0361c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41394808|gb|AAS02678.1| hypothetical protein MAP_0361c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336460865|gb|EGO39750.1| hypothetical protein MAPs_36880 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=217

 Score =  263 bits (673),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 147/217 (68%), Positives = 171/217 (79%), Gaps = 0/217 (0%)

Query  1    VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV  60
            +PSIDIDR+AAH+AA  EL KPIY K S   +L  W+++ +YR+L+K S++PGGW T TV
Sbjct  1    MPSIDIDRDAAHRAAADELHKPIYSKGSTPSQLVAWLNDAIYRMLQKISTVPGGWLTATV  60

Query  61   LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH  120
            L +LL IA   AV   RRTMRT RGGD+ LF+A  LTAAQHR+TAES AAEG+WAAAIRH
Sbjct  61   LFLLLAIAAVVAVHTLRRTMRTRRGGDHMLFEAAPLTAAQHRATAESCAAEGDWAAAIRH  120

Query  121  RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ  180
            RL+AVAR+LEETG+L  A GRTANELA DAG  LPHLAGEL QAATAFNDVTYGE+PGTQ
Sbjct  121  RLRAVARQLEETGVLTAAPGRTANELARDAGAALPHLAGELAQAATAFNDVTYGEQPGTQ  180

Query  181  GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR  217
             AYQ+IADLD+HLRSR   V      P V +SWAQVR
Sbjct  181  AAYQLIADLDEHLRSRWQGVTPPPGQPVVAESWAQVR  217


>gi|118462573|ref|YP_879699.1| hypothetical protein MAV_0414 [Mycobacterium avium 104]
 gi|254773419|ref|ZP_05214935.1| hypothetical protein MaviaA2_01901 [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|118163860|gb|ABK64757.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=217

 Score =  255 bits (652),  Expect = 3e-66, Method: Compositional matrix adjust.
 Identities = 147/217 (68%), Positives = 171/217 (79%), Gaps = 0/217 (0%)

Query  1    VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV  60
            +PSIDIDR+AAH+AA  EL KPIY K S   +L  W+++ +YR+L+K S++PGGW T TV
Sbjct  1    MPSIDIDRDAAHRAAADELHKPIYSKGSTPSQLVAWLNDAIYRMLQKISTVPGGWLTATV  60

Query  61   LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH  120
            L +LL IA   AV I RRTMRT RGGD+ LF+A  LTAAQHR+TAES AAE +WAAAIRH
Sbjct  61   LFLLLAIAAVVAVHILRRTMRTRRGGDHLLFEAAPLTAAQHRATAESCAAERDWAAAIRH  120

Query  121  RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ  180
            RL+AVAR+LEETG+L  A GRTANELA DAG  LPHLAGEL QAATAFNDVTYGE+PGTQ
Sbjct  121  RLRAVARQLEETGVLTAAPGRTANELARDAGAALPHLAGELAQAATAFNDVTYGEQPGTQ  180

Query  181  GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR  217
             AYQ+IADLD+HLRSR   V      P V +SWAQVR
Sbjct  181  AAYQLIADLDEHLRSRWQGVTPPPGQPVVAESWAQVR  217


>gi|118473014|ref|YP_890436.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
 gi|118174301|gb|ABK75197.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
Length=216

 Score =  236 bits (602),  Expect = 2e-60, Method: Compositional matrix adjust.
 Identities = 129/215 (60%), Positives = 158/215 (74%), Gaps = 1/215 (0%)

Query  3    SIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITVLL  62
            +IDIDR+AAH AAQ EL+KPIYP+ SLT++  DWIDE LYR+  +GS++PGGWFTI+VL 
Sbjct  3    TIDIDRDAAHDAAQNELNKPIYPRSSLTQQFLDWIDELLYRLAYEGSTVPGGWFTISVLA  62

Query  63   ILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRHRL  122
            IL+++AV  AV++ARR MRTNR   + LF   +L+AA+HR TA+ YAA+ NWAAAIRHRL
Sbjct  63   ILVVVAVLVAVRMARRAMRTNRDA-HTLFGRTELSAAEHRQTADGYAAQENWAAAIRHRL  121

Query  123  QAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQGA  182
            +AVAR LEETG LNP  GRTA ELA DAG  LP L+GEL  AAT FNDVTYGE+PGT+  
Sbjct  122  RAVARHLEETGTLNPVPGRTATELARDAGAALPALSGELAAAATTFNDVTYGEQPGTEDD  181

Query  183  YQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR  217
            Y+ IADLD  L         ++        W QVR
Sbjct  182  YRRIADLDGRLLHAGHRAAGSMPSIPADSGWTQVR  216


>gi|315446332|ref|YP_004079211.1| hypothetical protein Mspyr1_48390 [Mycobacterium sp. Spyr1]
 gi|315264635|gb|ADU01377.1| hypothetical protein Mspyr1_48390 [Mycobacterium sp. Spyr1]
Length=217

 Score =  233 bits (593),  Expect = 2e-59, Method: Compositional matrix adjust.
 Identities = 119/220 (55%), Positives = 153/220 (70%), Gaps = 10/220 (4%)

Query  3    SIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITVLL  62
            ++DIDR+AAH AAQ EL K IYPK S    L++W DE LYR+    + IPGGWFT+ VL+
Sbjct  3    TVDIDRDAAHDAAQAELSKSIYPKPSPMDLLSEWFDELLYRLTAGAAKIPGGWFTVAVLI  62

Query  63   ILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRHRL  122
            +LL +AV  A++IARR MR++RGGD  LF    L+AA+HR+TAE YAA G+WA A+RHR+
Sbjct  63   VLLAVAVIVAIRIARRAMRSSRGGDPALFGDQTLSAAEHRATAERYAAAGDWAPAVRHRV  122

Query  123  QAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQGA  182
            +A+AR+LEE G+L+P  GRTA ELA  AG  LP L G    AA  FNDVTYGE+P T+  
Sbjct  123  RAIARQLEENGVLDPVPGRTATELARTAGRTLPALTGAFITAAETFNDVTYGEQPATEPQ  182

Query  183  YQMIADLDDHL---RSRSPAVVSA--VQHPAVFDSWAQVR  217
            Y+M+A LDD +   RS SP+   +   Q P     WA+VR
Sbjct  183  YRMLAALDDSVGTQRSPSPSGTDSRDPQQP-----WAEVR  217


>gi|108801821|ref|YP_642018.1| hypothetical protein Mmcs_4858 [Mycobacterium sp. MCS]
 gi|119870974|ref|YP_940926.1| hypothetical protein Mkms_4947 [Mycobacterium sp. KMS]
 gi|126437790|ref|YP_001073481.1| hypothetical protein Mjls_5226 [Mycobacterium sp. JLS]
 gi|108772240|gb|ABG10962.1| conserved hypothetical protein [Mycobacterium sp. MCS]
 gi|119697063|gb|ABL94136.1| conserved hypothetical protein [Mycobacterium sp. KMS]
 gi|126237590|gb|ABO00991.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=216

 Score =  227 bits (578),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 123/217 (57%), Positives = 168/217 (78%), Gaps = 1/217 (0%)

Query  1    VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV  60
            +P++DIDR+AAH+AAQ+ELDKPIYP+ SLT  L++ +++ ++RI + G+ +PGGW TI+V
Sbjct  1    MPTVDIDRDAAHEAAQKELDKPIYPRASLTDRLSELLEDLIHRIAQGGAGVPGGWLTISV  60

Query  61   LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH  120
            L++L+++AV  AV+IARR MRT+RG +  L+   +L+AA+HR+TAE YAA G WA AIRH
Sbjct  61   LVLLILVAVVVAVRIARRAMRTDRG-EPSLYGGHELSAAEHRTTAEQYAASGQWALAIRH  119

Query  121  RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ  180
            RL+A+AR+LEE+G+L P  GRTA ELA+DAG  LP L+ EL  AATAFNDVTYG+RPGT+
Sbjct  120  RLRAIARQLEESGVLTPVPGRTATELANDAGLALPALSDELRDAATAFNDVTYGDRPGTE  179

Query  181  GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR  217
             AY+ +A LDDH+R+  P    A   P     WA+VR
Sbjct  180  AAYRSVAVLDDHIRAAGPTPGHASGVPRAATGWAEVR  216


>gi|169627495|ref|YP_001701144.1| hypothetical protein MAB_0391c [Mycobacterium abscessus ATCC 
19977]
 gi|169239462|emb|CAM60490.1| Conserved hypothetical membrane protein [Mycobacterium abscessus]
Length=214

 Score =  220 bits (561),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 112/217 (52%), Positives = 152/217 (71%), Gaps = 3/217 (1%)

Query  1    VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV  60
            +P+IDIDR++A +AA REL KPIY   S    L +WI +QL  +  +   +PGGWFTI V
Sbjct  1    MPAIDIDRDSAAEAAHRELAKPIYEHPSPIDRLINWIFDQLDYLEFRAGELPGGWFTILV  60

Query  61   LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH  120
              ++++ A    V+IARR +RT  G D+ LF++G+LTAA+HR+ AE  A++G+W++AIRH
Sbjct  61   TTLVVIAAAVLLVRIARRAVRTRGGADFGLFESGELTAAEHRAAAELAASQGDWSSAIRH  120

Query  121  RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ  180
            RL+AVAR+LEE  +L P  GRTANELA+DAG  LP LA E   AA  FNDV+YG+RPGT+
Sbjct  121  RLRAVARQLEERTILTPVPGRTANELAADAGRELPSLAAEFRAAAEIFNDVSYGDRPGTE  180

Query  181  GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR  217
             +Y+ IADLDDH+R  +P + SA +       W  VR
Sbjct  181  QSYRKIADLDDHIRD-APVLASAAESGTT--GWEAVR  214


>gi|120406400|ref|YP_956229.1| hypothetical protein Mvan_5453 [Mycobacterium vanbaalenii PYR-1]
 gi|119959218|gb|ABM16223.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=216

 Score =  216 bits (549),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 121/215 (57%), Positives = 156/215 (73%), Gaps = 1/215 (0%)

Query  3    SIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITVLL  62
            +IDIDR+AA +AAQ EL K IYPK S    L DWI++ LYR+    +  PGGW+T+ VLL
Sbjct  3    TIDIDRDAAQEAAQNELAKAIYPKPSPMDMLYDWIEQLLYRLTASAAKFPGGWYTVAVLL  62

Query  63   ILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRHRL  122
            +LL++AV  AV+IARR MR++R     LF    L+AA+HR+TAE +AA G+WA A+RHR+
Sbjct  63   VLLVVAVVVAVRIARRAMRSDRSTGPALFGDHILSAAEHRATAERHAASGDWAPAVRHRV  122

Query  123  QAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQGA  182
            +A+AR+LEE G+L+P  GRTA ELA  AG  LP L+GEL+ AA  FNDVTYGE+P T+  
Sbjct  123  RAIARQLEENGVLDPVPGRTATELARAAGRALPALSGELSTAADTFNDVTYGEQPATEPQ  182

Query  183  YQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR  217
            Y+MIA LDDHL SR+P+ V AV   A    WA+VR
Sbjct  183  YRMIAALDDHLGSRTPSSV-AVHADAAHQPWAEVR  216


>gi|145221931|ref|YP_001132609.1| hypothetical protein Mflv_1339 [Mycobacterium gilvum PYR-GCK]
 gi|145214417|gb|ABP43821.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=217

 Score =  211 bits (536),  Expect = 7e-53, Method: Compositional matrix adjust.
 Identities = 119/220 (55%), Positives = 153/220 (70%), Gaps = 10/220 (4%)

Query  3    SIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITVLL  62
            ++DIDR+AAH AAQ EL K IYPK S    L++W DE LYR+    + IPGGWFT+ VL+
Sbjct  3    TVDIDRDAAHDAAQAELSKSIYPKPSPMDLLSEWFDELLYRLTAGAAKIPGGWFTVAVLV  62

Query  63   ILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRHRL  122
            +LL +AV  A++IARR MR++RGGD  LF    L+AA+HR+TAE YAA G+WA A+RHR+
Sbjct  63   VLLAVAVIVAIRIARRAMRSSRGGDPALFGDQTLSAAEHRATAERYAAAGDWAPAVRHRV  122

Query  123  QAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQGA  182
            +A+AR+LEE G+L+P  GRTA ELA  AG  LP L G    AA  FNDVTYGE+P T+  
Sbjct  123  RAIARQLEENGVLDPVPGRTATELARTAGRTLPALTGAFITAAETFNDVTYGEQPATEPQ  182

Query  183  YQMIADLDDHL---RSRSPAVVSA--VQHPAVFDSWAQVR  217
            Y+M+A LDD +   RS SP+   +   Q P     WA+VR
Sbjct  183  YRMLAALDDSVGTQRSPSPSGTDSRDPQQP-----WAEVR  217


>gi|271962951|ref|YP_003337147.1| hypothetical protein Sros_1410 [Streptosporangium roseum DSM 
43021]
 gi|270506126|gb|ACZ84404.1| hypothetical protein Sros_1410 [Streptosporangium roseum DSM 
43021]
Length=223

 Score =  157 bits (397),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 90/196 (46%), Positives = 123/196 (63%), Gaps = 1/196 (0%)

Query  4    IDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGS-SIPGGWFTITVLL  62
            IDIDR+ A + A +EL KP Y K+SL       + + L  +L++ S  + G      VL 
Sbjct  17   IDIDRDQARREALQELLKPEYAKESLIDRAMRAVSQFLGDLLDQESVGVVGSVAARVVLA  76

Query  63   ILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRHRL  122
            ++++ A+TA V IARR  R        +F   + TAA+HR  AE  AAE  WA A+R RL
Sbjct  77   VIVIAAITAVVTIARRATRGGAVRQDGIFGDRRRTAAEHRDAAERLAAESRWAEAVRERL  136

Query  123  QAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQGA  182
            +AVAR+LE+  +++   GRTA ELA++AG VLP  AGELT AA  F+DVTYGE PGT  A
Sbjct  137  RAVARDLEDRAIVDSTPGRTAGELAAEAGRVLPAFAGELTTAARVFDDVTYGEVPGTAEA  196

Query  183  YQMIADLDDHLRSRSP  198
            Y+++ DLD+ LR+  P
Sbjct  197  YEVLRDLDERLRTARP  212


>gi|333992609|ref|YP_004525223.1| hypothetical protein JDM601_3969 [Mycobacterium sp. JDM601]
 gi|333488577|gb|AEF37969.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=202

 Score =  150 bits (379),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 105/193 (55%), Positives = 143/193 (75%), Gaps = 1/193 (0%)

Query  1    VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV  60
            +P++DIDREAA +AA+REL KPIYP+ S  ++  D+++  + R++ +G+ +PGGWFTI+V
Sbjct  1    MPTVDIDREAAREAAERELAKPIYPRPSPKQQFIDFLETLVQRLILRGAELPGGWFTISV  60

Query  61   LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH  120
            LLILL  AV AAV + RR +R  RG D +LF   Q +AA++R+TA+  AA G+W  AIRH
Sbjct  61   LLILLAAAVVAAVTVGRRMLRDGRG-DQRLFGTTQRSAAEYRATAQHCAAAGDWGEAIRH  119

Query  121  RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ  180
             L+AVARELEETG+L+ A GRTA ELA DAG  LP LA  L +AA  FNDV+YGE P T 
Sbjct  120  GLRAVARELEETGVLHAAPGRTATELARDAGAALPALADALLRAAETFNDVSYGELPATP  179

Query  181  GAYQMIADLDDHL  193
              Y+++AD+D+ +
Sbjct  180  DGYRIVADIDEQV  192


>gi|300783066|ref|YP_003763357.1| hypothetical protein AMED_1140 [Amycolatopsis mediterranei U32]
 gi|299792580|gb|ADJ42955.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
 gi|340524445|gb|AEK39650.1| hypothetical protein RAM_05790 [Amycolatopsis mediterranei S699]
Length=213

 Score =  115 bits (287),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 78/206 (38%), Positives = 122/206 (60%), Gaps = 5/206 (2%)

Query  1    VPSIDIDREAAHQAAQRELDKPIY--PKDSLTKELTDWIDEQLYRILEKGSS-IPGGWFT  57
            VP +DIDR+AA +AA+ EL  P Y   +    +++  W+ EQL ++L   SS +PGG F 
Sbjct  9    VP-VDIDRDAARRAAEEELSDPKYRDARPGFLQQIGQWLGEQLEKLLNSLSSDVPGGIFG  67

Query  58   ITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAA  117
            + +L+ LL++ V        +   + R G   +F   +  A+ +R  AE  AA G +  A
Sbjct  68   VVLLVALLIVLVVVIRLRTGKMAASARAGSV-VFGGPRKNASDYRRAAEEAAAAGRFDDA  126

Query  118  IRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERP  177
            +R R +AV R LEE  +L+  +GRTA+E A++AG +LP++A +L Q A  F+DV YG R 
Sbjct  127  VRDRFRAVVRALEERALLDARSGRTADEAAAEAGLLLPNVADQLRQGARLFDDVHYGGRE  186

Query  178  GTQGAYQMIADLDDHLRSRSPAVVSA  203
            GT+ AY+ + +LD+  R   P  ++A
Sbjct  187  GTEAAYRTLTELDERCRRERPVAMAA  212


>gi|297194036|ref|ZP_06911434.1| integral membrane protein [Streptomyces pristinaespiralis ATCC 
25486]
 gi|197722593|gb|EDY66501.1| integral membrane protein [Streptomyces pristinaespiralis ATCC 
25486]
Length=228

 Score =  110 bits (276),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 76/211 (37%), Positives = 120/211 (57%), Gaps = 11/211 (5%)

Query  1    VPSIDIDREAAHQAAQRELDKPIYPKDS---LTKELT---DWIDEQLYRILEKGSSIPGG  54
            VP +D  R+ A +AA+REL +P+Y ++    L + L    +W+D  L+     G+  PGG
Sbjct  19   VP-VDTPRDPAREAAERELSRPMYHENDPNLLERALDRFWEWVD-GLFGAASSGA--PGG  74

Query  55   WFTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNW  114
               +  ++++++    A      +  RT R  D  LF+ G  +A+ HRS ++ +AA   W
Sbjct  75   VIGLIAIILVVLALAAALWWRLGKPQRTVRTAD-SLFEEGPRSASAHRSASDKHAAAERW  133

Query  115  AAAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYG  174
              A++ R++A+ R LEE  +L+P  GRTA+E A++AG  LPH A EL  AA  F+DVTYG
Sbjct  134  NQAVQERMRAIVRSLEERTLLDPRPGRTADEAAAEAGRTLPHHADELRAAARVFDDVTYG  193

Query  175  ERPGTQGAYQMIADLDDHLRSRSPAVVSAVQ  205
             R   + AY+ + DLD  L +  P   +A +
Sbjct  194  GRTADRQAYERLRDLDLDLENSKPLSATAAE  224


>gi|72162897|ref|YP_290554.1| integral membrane protein [Thermobifida fusca YX]
 gi|71916629|gb|AAZ56531.1| putative integral membrane protein [Thermobifida fusca YX]
Length=203

 Score =  103 bits (256),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 75/200 (38%), Positives = 107/200 (54%), Gaps = 5/200 (2%)

Query  6    IDREAAHQAAQRELDKPIY--PKDSLTKELTDWIDEQLYRILEKG-SSIPGGWFTITVLL  62
            + RE   + A  EL  P+Y   + SL      W+D  L  +L    +++PGGW+T+  LL
Sbjct  2    VSREEGARLAWEELSDPVYDEARPSLLDLFFRWVDRLLGELLGAAQTALPGGWWTLGALL  61

Query  63   ILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRHRL  122
            ++L + V A +   R      R     L  AG L+  + R+ A+ +AA G +A AIR RL
Sbjct  62   VVLALLVAALLWYLRPGRAARRA--AVLDSAGTLSTDEQRALADEHAARGAYAEAIRERL  119

Query  123  QAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQGA  182
            +AV R+LE+  +L P  GRTA E A +   V P    EL + A  FNDV YG+R  T   
Sbjct  120  RAVVRDLEDHAVLTPRLGRTATEWAVETSAVFPDQRTELHRVAALFNDVWYGDREATAEG  179

Query  183  YQMIADLDDHLRSRSPAVVS  202
            Y+++  LDD LR   PA+ S
Sbjct  180  YRLVCALDDTLRRALPALPS  199


>gi|328882805|emb|CCA56044.1| putative integral membrane protein [Streptomyces venezuelae ATCC 
10712]
Length=230

 Score =  100 bits (249),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 74/207 (36%), Positives = 106/207 (52%), Gaps = 9/207 (4%)

Query  4    IDIDREAAHQAAQRELDKPIYPKDSLT------KELTDWIDEQLYRILEKGSSIPGGWFT  57
            +DI R  A +AA+REL KP+Y ++             +W+DE          + PGG   
Sbjct  22   VDISRIPAREAAERELSKPMYHENDPNLLQRGLDRFWEWLDELFG---AASGATPGGVLG  78

Query  58   ITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAA  117
            + V+++L+     A         R  R G   LF  G  TA  HRS AE +AA G W  A
Sbjct  79   LVVVVLLVAAVAAALWWRLGTPHRAPRTGGDSLFADGPRTARDHRSAAERHAAAGRWNQA  138

Query  118  IRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERP  177
            ++ R++A+ R LEE  +L+P  GRTA+E A++A   LP  A +L  A  AF+DVTYG R 
Sbjct  139  VQERMRAIVRSLEERTLLDPRPGRTADEAAAEASRALPSHADDLRLAVRAFDDVTYGGRT  198

Query  178  GTQGAYQMIADLDDHLRSRSPAVVSAV  204
              + AY+ + +LD  L    P +  A 
Sbjct  199  ADEPAYRRVEELDTALERTRPTLDPAT  225


>gi|345000057|ref|YP_004802911.1| putative integral membrane protein [Streptomyces sp. SirexAA-E]
 gi|344315683|gb|AEN10371.1| putative integral membrane protein [Streptomyces sp. SirexAA-E]
Length=229

 Score = 95.5 bits (236),  Expect = 5e-18, Method: Compositional matrix adjust.
 Identities = 66/201 (33%), Positives = 100/201 (50%), Gaps = 10/201 (4%)

Query  4    IDIDREAAHQAAQRELDKPIYPK---DSLTKELT---DWIDEQLYRILEKGSSIPGGWFT  57
            +DI R  A +AAQ EL  P+Y +   + L + L    DW+ +              G   
Sbjct  21   VDIPRVPAREAAQDELSDPMYHEHDPNLLERGLDRFWDWVGDLFDGAAGAAPGGSLGLVV  80

Query  58   ITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAA  117
            I +++  L+ A+   +   +R  R        LF     +AA HR  A+++A    W  A
Sbjct  81   IMLIIAGLVAALWWRLGTPQRVARPPEA----LFGGAARSAADHRKAAQAHADAHRWTEA  136

Query  118  IRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERP  177
            ++ R++A+ R LE+  +L+P  GRTA+E AS+AG  LP  A  L  AA  F+DVTYG R 
Sbjct  137  VQERMRALVRALEDRAVLDPRPGRTADEAASEAGRALPAHASRLRSAARVFDDVTYGGRT  196

Query  178  GTQGAYQMIADLDDHLRSRSP  198
                AYQ ++ LD  + +  P
Sbjct  197  ADAAAYQDLSALDRDIEAAKP  217


>gi|29831603|ref|NP_826237.1| integral membrane protein [Streptomyces avermitilis MA-4680]
 gi|29608719|dbj|BAC72772.1| putative integral membrane protein [Streptomyces avermitilis 
MA-4680]
Length=239

 Score = 94.4 bits (233),  Expect = 9e-18, Method: Compositional matrix adjust.
 Identities = 77/208 (38%), Positives = 115/208 (56%), Gaps = 12/208 (5%)

Query  2    PSIDIDREAAHQAAQRELDKPIYPKDSLT------KELTDWIDEQLYRILEKGSS-IPGG  54
            P + I R+ A +AA+REL K +Y K+  +          DW+D    R+    S+  PGG
Sbjct  22   PPVTIPRDPAREAARRELSKRMYHKNDPSLFERALNAFWDWVD----RLFNAASTATPGG  77

Query  55   WFTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNW  114
               + V+ +L ++AV  A+     T          LF+    +AA+HR+ AE++AA+G+W
Sbjct  78   ALGLLVI-VLAVLAVGGALWWRLGTPGRAPLPAAALFEDRPRSAAEHRAAAEAHAAQGHW  136

Query  115  AAAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYG  174
              A++ R++AV R LEE  +L+   GRTA+E AS+AG  LP  A  L  AA  F+DVTYG
Sbjct  137  NQAVQERMRAVVRSLEERALLDVRPGRTADEAASEAGRTLPVHAERLRAAARDFDDVTYG  196

Query  175  ERPGTQGAYQMIADLDDHLRSRSPAVVS  202
             R   +G YQ +A LD  +    P ++S
Sbjct  197  GRAAGEGTYQRLAALDADVDRTRPVLMS  224


>gi|296394410|ref|YP_003659294.1| hypothetical protein Srot_2007 [Segniliparus rotundus DSM 44985]
 gi|296181557|gb|ADG98463.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985]
Length=239

 Score = 94.4 bits (233),  Expect = 9e-18, Method: Compositional matrix adjust.
 Identities = 69/194 (36%), Positives = 107/194 (56%), Gaps = 5/194 (2%)

Query  3    SIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITVLL  62
            ++++DRE A QAAQREL  P Y   +  ++  DW+            S    W    + L
Sbjct  2    TVEVDREPARQAAQRELTDPRYEHRTWWEDFVDWLGRHALDRSSHAHSHDSFWDANVMPL  61

Query  63   ILLMIAVTAAVQIARRTMRTNRGGDYQ--LFD--AGQLTAAQ-HRSTAESYAAEGNWAAA  117
            ++L++ +     +     R  RG   +  +F+  + +L++A+ HR+ A   A+ G+W+AA
Sbjct  62   LVLLVVLMLGALVVFFARRATRGTAKKKTIFEDESAELSSAEEHRARARRAASAGDWSAA  121

Query  118  IRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERP  177
            I  R++AV +EL+E   L    GRTA+E A  A  +LP L    T AA AF++V YGERP
Sbjct  122  IAERVRAVVKELDERSALALTPGRTADEFAFLASGLLPELQDGFTAAARAFDEVVYGERP  181

Query  178  GTQGAYQMIADLDD  191
            G++ AYQ  A LD+
Sbjct  182  GSERAYQEAARLDE  195


>gi|302560330|ref|ZP_07312672.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
 gi|302477948|gb|EFL41041.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
Length=236

 Score = 93.6 bits (231),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 71/207 (35%), Positives = 113/207 (55%), Gaps = 10/207 (4%)

Query  2    PSIDIDREAAHQAAQRELDKPIYPKDSLT------KELTDWIDEQLYRILEKGSSIPGGW  55
            P + + R+ A  AA+REL K +Y ++  +           W+D+         ++ PGG 
Sbjct  19   PPVTVPRDPARDAARRELSKGMYHENDPSWFQRALDAFWGWVDDLFG---AASTATPGGA  75

Query  56   FTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWA  115
              + +++I  ++AV  A+     T R        LFD    +AA+HR+ AE++AA+ +W 
Sbjct  76   LGL-IVVIAAVLAVLGALWWRLGTPRRRATSAPALFDDRPRSAAEHRAAAEAHAAQSHWN  134

Query  116  AAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGE  175
             A++ R++AV R LEE  +L+P  GRTA+E A++AG  LP   G L  AA  F+DVTYG 
Sbjct  135  QAVQERMRAVVRALEERALLDPRPGRTADEAAAEAGRALPDHTGRLHTAARVFDDVTYGG  194

Query  176  RPGTQGAYQMIADLDDHLRSRSPAVVS  202
            R  T+ +Y+ +A LD  L    P + +
Sbjct  195  RTATEQSYRQLAALDHDLERAKPRLAT  221


>gi|317508342|ref|ZP_07966017.1| hypothetical protein HMPREF9336_02389 [Segniliparus rugosus ATCC 
BAA-974]
 gi|316253366|gb|EFV12761.1| hypothetical protein HMPREF9336_02389 [Segniliparus rugosus ATCC 
BAA-974]
Length=220

 Score = 92.8 bits (229),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 64/193 (34%), Positives = 104/193 (54%), Gaps = 5/193 (2%)

Query  4    IDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITVLLI  63
            +++DR+ A +AAQREL  P Y   +   +  DW+  +    +  G    G W    + L+
Sbjct  1    MEVDRDPAKEAAQRELTDPRYEHRTWWDDFIDWLGRRTSDRVLNGHRHSGFWDGNLMPLL  60

Query  64   LLMIAVTAAVQI---ARRTMRT--NRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAI  118
            +L++ +     I   ARR  R    +G  ++       ++ +HR  A++ A  G+WA AI
Sbjct  61   VLLVILVLGALIGYYARRATRGAPKKGALFEDEAEELSSSEEHRQRAKASALAGDWATAI  120

Query  119  RHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPG  178
              R++A  +EL+E  +L    GRTA+E A  AG +LP L G+L  A+ AF++V YG R G
Sbjct  121  AERMRAAVKELDERTVLALTPGRTADEFAFLAGGLLPELEGDLANASGAFDEVVYGGRAG  180

Query  179  TQGAYQMIADLDD  191
            ++  Y  +A LD+
Sbjct  181  SERTYLDVARLDE  193


>gi|297200108|ref|ZP_06917505.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
 gi|297147580|gb|EDY59449.2| integral membrane protein [Streptomyces sviceus ATCC 29083]
Length=242

 Score = 89.0 bits (219),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 71/210 (34%), Positives = 112/210 (54%), Gaps = 12/210 (5%)

Query  2    PSIDIDREAAHQAAQRELDKPIYPKDSLT------KELTDWIDEQLYRILEKGSS-IPGG  54
            P + I R+ A +AA+REL K +Y ++  +          DW+     ++ +  SS  PGG
Sbjct  19   PPLTIPRDPAREAARRELFKRMYHENDPSWFQRALNAFWDWVG----KLFDAASSATPGG  74

Query  55   WFTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNW  114
               + V++  + + V  A+     T R        LFD    +AA HR+ AE++AA+ +W
Sbjct  75   ALGLVVVIAAIAL-VVGALWWRLGTPRREPASSAALFDDRPRSAADHRAAAEAHAAQRHW  133

Query  115  AAAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYG  174
              A++ R++A+ R LEE  +L+   GRTA+E A++AG  LP     L  AA  F+DVTYG
Sbjct  134  NQALQERMRAIVRSLEERALLDVRPGRTADEAAAEAGRALPSHTDRLRSAARDFDDVTYG  193

Query  175  ERPGTQGAYQMIADLDDHLRSRSPAVVSAV  204
             R  T+ +Y  IA+LD  L    P + ++ 
Sbjct  194  GRAATEQSYDRIAELDRALERTKPVLANST  223


>gi|311896325|dbj|BAJ28733.1| hypothetical protein KSE_29220 [Kitasatospora setae KM-6054]
Length=225

 Score = 87.0 bits (214),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 74/206 (36%), Positives = 113/206 (55%), Gaps = 7/206 (3%)

Query  4    IDIDREAAHQAAQRELDKPIYPK--DSLTKELTDWIDEQLYRILEKGSSIPGGWFTITVL  61
            ++  R+AA  AA  EL K +Y +    + +   DW+  Q+ R ++ G S P G      L
Sbjct  16   VETPRDAARDAAHEELRKAVYHQHEPGVVERFVDWVQHQISRAVD-GVSTPLGGGGNAAL  74

Query  62   LILLMIAVTAAVQIARRTMRTNRGGDY--QLFDA--GQLTAAQHRSTAESYAAEGNWAAA  117
             +L+++A+     + RR     R      +LF    G  +AA HR+ A ++AA G W  A
Sbjct  75   ALLIVLALVLGFVLWRRYGAPRRAARATGKLFTGPEGPRSAAGHRADAAAHAAAGAWEDA  134

Query  118  IRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERP  177
            +R +++A+ R LEE  +L P  GRTA+E A++AG  LP  A EL  AA  F+D+ +G+RP
Sbjct  135  VREQMRALVRALEERTVLAPRPGRTADEAAAEAGRALPDHARELASAARLFDDIAFGDRP  194

Query  178  GTQGAYQMIADLDDHLRSRSPAVVSA  203
              + AY+++ADLD  L    P  V A
Sbjct  195  ADERAYRLLADLDQTLGRTRPVAVPA  220


>gi|333920343|ref|YP_004493924.1| integral membrane protein [Amycolicicoccus subflavus DQS3-9A1]
 gi|333482564|gb|AEF41124.1| Integral membrane protein [Amycolicicoccus subflavus DQS3-9A1]
Length=220

 Score = 87.0 bits (214),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 70/222 (32%), Positives = 116/222 (53%), Gaps = 20/222 (9%)

Query  1    VPSIDIDREAAHQAAQRELDKPIYPK------DSLTKELTDWIDEQLYRILEKGSSI-PG  53
            VP ++IDR++A + A+ EL + +Y +      + +   L D + + +  I +  +++ PG
Sbjct  9    VP-VEIDRDSAREVARTELSRSMYTEAQPTLLERVMMWLLDRVQDAIDAIFDGANALAPG  67

Query  54   GWFTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGN  113
            G  ++ +LL +++ A         R  R+ R     +F   + +AA+HR  A++ AA G+
Sbjct  68   GPGSLVILLAIMITAAIIIRLRMGRVARSTRM-RRAIFSETRRSAAEHRRLADAAAAVGD  126

Query  114  WAAAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTY  173
               A+  R +A+ R LEE G+++ AAG+TA E+A  AGE L   A  L  AA  F+DV Y
Sbjct  127  LDEAVHERFRAIVRALEERGVVDDAAGQTATEVAVRAGEELIGCAEPLRSAARTFDDVYY  186

Query  174  GERPGTQGAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQ  215
            G R   +G Y      DD +R+      + VQ   + DS  Q
Sbjct  187  GHRSAARGVY------DDLVRTD-----ALVQSAPLIDSEKQ  217


>gi|297562677|ref|YP_003681651.1| integral membrane protein [Nocardiopsis dassonvillei subsp. dassonvillei 
DSM 43111]
 gi|296847125|gb|ADH69145.1| putative integral membrane protein [Nocardiopsis dassonvillei 
subsp. dassonvillei DSM 43111]
Length=207

 Score = 86.7 bits (213),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 65/196 (34%), Positives = 108/196 (56%), Gaps = 4/196 (2%)

Query  5    DIDREAAHQAAQRELDKPIYPKD--SLTKELTDWIDEQLYRILEKGSSIPGGWFTITVLL  62
            ++ RE   + A  EL  P+Y +   SL      W+ E L  ++ +     GGW T+   L
Sbjct  8    EVTREEGQRRAVEELSDPLYGEQEPSLWDRFLSWLQELLADLVSQAPDALGGW-TVLGPL  66

Query  63   ILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRHRL  122
            ++++  +   + +  R  R+ R G   + +   + AA HR+ A+ +   G +AAA+  RL
Sbjct  67   LVVVAVLVVWLVLWLRPTRSRRAG-APVHEGAPMDAADHRAAADRHERAGEFAAAVTERL  125

Query  123  QAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQGA  182
            +A++ +LEE  ++ P AGRTA ELA++A  VL   A  L++ A  FNDV YG+RP T  +
Sbjct  126  RAISVDLEERAIITPRAGRTATELAAEASAVLTAEAEGLSEGARIFNDVAYGDRPATADS  185

Query  183  YQMIADLDDHLRSRSP  198
             +++ +LD  LR+  P
Sbjct  186  ARLLRELDTRLRAARP  201


>gi|291439272|ref|ZP_06578662.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
 gi|291342167|gb|EFE69123.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length=238

 Score = 86.3 bits (212),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 72/210 (35%), Positives = 114/210 (55%), Gaps = 14/210 (6%)

Query  2    PSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILE--------KGSSIPG  53
            P + + R+ A +AA+REL K +Y ++        W    L    E          ++ PG
Sbjct  19   PPVTLPRDPAREAARRELSKRMYHEND-----PGWFQRALDAFWEWVGDLFATASTATPG  73

Query  54   GWFTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGN  113
            G   + V++  ++  +  A+     T R        LFD    +AA+HR+ AE++AA+G+
Sbjct  74   GTLGLIVVIAAVVAVL-GALWWRLGTPRRQPASAPALFDDRPRSAAEHRAAAEAHAAQGH  132

Query  114  WAAAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTY  173
            W  A+R R++A+ R LEE  +L+   GRTA+E A++AG  LP  A  L  AA +F+DVTY
Sbjct  133  WNQAVRERMRAIVRSLEERALLDVRPGRTADEAAAEAGRALPAHADPLHAAARSFDDVTY  192

Query  174  GERPGTQGAYQMIADLDDHLRSRSPAVVSA  203
            G R  T+ +Y+ +ADLD  L   +P + S+
Sbjct  193  GGRAATEQSYRHLADLDRALERATPQLTSS  222


>gi|302551836|ref|ZP_07304178.1| integral membrane protein [Streptomyces viridochromogenes DSM 
40736]
 gi|302469454|gb|EFL32547.1| integral membrane protein [Streptomyces viridochromogenes DSM 
40736]
Length=245

 Score = 85.9 bits (211),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 76/209 (37%), Positives = 117/209 (56%), Gaps = 6/209 (2%)

Query  2    PSIDIDREAAHQAAQRELDKPIYPKD--SLTKELTDWIDEQLYRILEKGSS-IPGGWFTI  58
            P +   R+ A +AA+REL K +Y ++  SL +   D   + L ++L   S+  PGG  T+
Sbjct  27   PPLTTPRDPAREAARRELSKRMYHENDPSLIQRALDAFWDWLGKLLNAASTATPGG--TL  84

Query  59   TVLLILLMIAVTAAVQIAR-RTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAA  117
             +++++L +    A    R  T R        LFD    +AA HR+ AE++AA+G+W  A
Sbjct  85   GLVVVILAVVALVAALWWRLGTPRRRPTSSATLFDDRPRSAADHRAAAEAHAAQGHWNQA  144

Query  118  IRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERP  177
            ++ R++A+ R LEE  +L+   GRTA+E A++AG  LP     L  AA  F+DVTYG R 
Sbjct  145  VQERMRALVRALEERALLDVRPGRTADEAAAEAGRALPAHTDRLRAAARDFDDVTYGGRS  204

Query  178  GTQGAYQMIADLDDHLRSRSPAVVSAVQH  206
             T+ AY  I +LD  L    P +V++  H
Sbjct  205  ATEQAYHRITELDRDLERTKPRLVTSSAH  233


>gi|326778964|ref|ZP_08238229.1| putative integral membrane protein [Streptomyces cf. griseus 
XylebKG-1]
 gi|326659297|gb|EGE44143.1| putative integral membrane protein [Streptomyces griseus XylebKG-1]
Length=229

 Score = 83.2 bits (204),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 72/202 (36%), Positives = 110/202 (55%), Gaps = 11/202 (5%)

Query  4    IDIDREAAHQAAQRELDKPIYPKDS---LTKELT---DWIDEQLYRILEKGSSIPGGWFT  57
            +D  R  A +AA+ EL KP+Y ++    L + L    DW+      + +  +    G   
Sbjct  21   VDTPRLPAREAAESELSKPMYHENDPNFLQRALNRFWDWVAG----VFDAAAGAAPGGPA  76

Query  58   ITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDA-GQLTAAQHRSTAESYAAEGNWAA  116
              ++L++L+I + AA+     T + +      LFD+ G  +AAQHR+ AE++A    W+ 
Sbjct  77   GLLVLVVLIIGLAAALWWRLGTPQRSFWSKEALFDSDGPRSAAQHRAAAEAHATALRWSE  136

Query  117  AIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGER  176
            A++ R++AV R LEE  +L+P  GRTA+E A++AG  LP  A  L  AA +F+DVTYG R
Sbjct  137  AVQERMRAVVRSLEERALLDPRPGRTADEAAAEAGRALPEHAVRLRAAARSFDDVTYGGR  196

Query  177  PGTQGAYQMIADLDDHLRSRSP  198
               Q AY  +  LD  L    P
Sbjct  197  TADQPAYLSLRALDLELDEAKP  218


>gi|284029585|ref|YP_003379516.1| hypothetical protein Kfla_1622 [Kribbella flavida DSM 17836]
 gi|283808878|gb|ADB30717.1| hypothetical protein Kfla_1622 [Kribbella flavida DSM 17836]
Length=216

 Score = 83.2 bits (204),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 69/186 (38%), Positives = 97/186 (53%), Gaps = 4/186 (2%)

Query  2    PSIDIDREAAHQAAQRELDKPIYPK--DSLTKELTDWIDEQLYRILEKGSSIPGGWFTIT  59
            P +D  R+ A   A REL KP Y +  DSL  +    + E +  +L+   S      T  
Sbjct  10   PPVDTTRDEAAAEATRELSKPAYGQAGDSLVSKAVQKVLEWIADLLDGLVSPSTDGKTGL  69

Query  60   VLLILLMIAVTAAVQIARRTMRTNRGGDYQ-LFDAGQ-LTAAQHRSTAESYAAEGNWAAA  117
            VLL+ L+  +   V      +RT+     Q +FD+ +  +AAQ+R+ AE  AA G++ AA
Sbjct  70   VLLLGLIALIAVVVLWRAGVLRTSGSSANQAVFDSERPRSAAQYRAQAEQEAAGGDFTAA  129

Query  118  IRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERP  177
            +R R +A   EL E  +L+  AGRTA E  +DAG  +P L   L  AA  F +V YG RP
Sbjct  130  VRSRFRACVAELTERTVLDERAGRTAYEAVADAGRAVPALRDPLRPAADVFTEVAYGNRP  189

Query  178  GTQGAY  183
            GT   Y
Sbjct  190  GTPERY  195


>gi|21221459|ref|NP_627238.1| integral membrane protein [Streptomyces coelicolor A3(2)]
 gi|7799211|emb|CAB90927.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
Length=231

 Score = 82.4 bits (202),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 71/209 (34%), Positives = 114/209 (55%), Gaps = 10/209 (4%)

Query  2    PSIDIDREAAHQAAQRELDKPIYPKDSLT------KELTDWIDEQLYRILEKGSSIPGGW  55
            P + I R+ A  AA+REL K +Y ++  +          DW++E    +  K S+   G 
Sbjct  8    PPVTIPRDPARDAARRELSKRMYHENDPSWFQRALNAFWDWVEE----LFSKASTATPGG  63

Query  56   FTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWA  115
                V++++ ++A   A+     T R        LFD    +AA HR+ A+++AA+G+W 
Sbjct  64   TLGLVVVVVAVLAALGALWWRLGTPRRGPVSAPTLFDNRPRSAADHRAAAQAHAAQGHWN  123

Query  116  AAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGE  175
             A++ R++AV R LEE  +L+   GRTA+E A++AG  LP     L  AA  F+DV YG 
Sbjct  124  QAVQERMRAVVRALEERALLDIRPGRTADEAATEAGRSLPDHKDRLRAAARDFDDVAYGG  183

Query  176  RPGTQGAYQMIADLDDHLRSRSPAVVSAV  204
            RPG++ +Y+ + +LD  L    P +VS+ 
Sbjct  184  RPGSEESYRHLTELDHDLDRSKPHLVSST  212


>gi|289771255|ref|ZP_06530633.1| integral membrane protein [Streptomyces lividans TK24]
 gi|289701454|gb|EFD68883.1| integral membrane protein [Streptomyces lividans TK24]
Length=239

 Score = 82.0 bits (201),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 71/209 (34%), Positives = 114/209 (55%), Gaps = 10/209 (4%)

Query  2    PSIDIDREAAHQAAQRELDKPIYPKDSLT------KELTDWIDEQLYRILEKGSSIPGGW  55
            P + I R+ A  AA+REL K +Y ++  +          DW++E    +  K S+   G 
Sbjct  16   PPVTIPRDPARDAARRELSKRMYHENDPSWFQRALNAFWDWVEE----LFSKASTATPGG  71

Query  56   FTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWA  115
                V++++ ++A   A+     T R        LFD    +AA HR+ A+++AA+G+W 
Sbjct  72   TLGLVVVVVAVLAALGALWWRLGTPRRGPVSAPTLFDDRPRSAADHRAAAQAHAAQGHWN  131

Query  116  AAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGE  175
             A++ R++AV R LEE  +L+   GRTA+E A++AG  LP     L  AA  F+DV YG 
Sbjct  132  QAVQERMRAVVRALEERALLDIRPGRTADEAATEAGRSLPDHKDRLRAAARDFDDVAYGG  191

Query  176  RPGTQGAYQMIADLDDHLRSRSPAVVSAV  204
            RPG++ +Y+ + +LD  L    P +VS+ 
Sbjct  192  RPGSEESYRHLTELDHDLDRSKPHLVSST  220


>gi|290959914|ref|YP_003491096.1| protein [Streptomyces scabiei 87.22]
 gi|260649440|emb|CBG72555.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length=238

 Score = 80.5 bits (197),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 73/207 (36%), Positives = 110/207 (54%), Gaps = 6/207 (2%)

Query  2    PSIDIDREAAHQAAQRELDKPIYPKD--SLTKELTDWIDEQLYRILEKGSS-IPGGWFTI  58
            P + + R+ A +AA+REL K +Y ++  S  +   D   E L ++    S+  PGG  T+
Sbjct  21   PPLTLPRDPAREAARRELSKGMYHQNDPSWYERAMDAFWEWLDKVFGAASAATPGG--TL  78

Query  59   TVLLILLMIAVTAAVQIAR-RTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAA  117
             +++I+L +         R    R        LFD    +AA+HR+ AE+ AA+G+W  A
Sbjct  79   GLVVIVLAVLALLGALWWRLGAPRRAPASSAVLFDDRPRSAAEHRAAAEAQAAQGHWNQA  138

Query  118  IRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERP  177
            ++ R++ V R LEE  +L+   GRTA+E AS+AG  LP  A  L  AA  F+DVTYG R 
Sbjct  139  VQERMRGVVRSLEERALLDVRPGRTADEAASEAGTSLPAHADRLHTAARDFDDVTYGGRS  198

Query  178  GTQGAYQMIADLDDHLRSRSPAVVSAV  204
             ++  Y  +A LD  L    P   S+ 
Sbjct  199  ASEETYLRLAALDTDLERARPVTASST  225


>gi|239988168|ref|ZP_04708832.1| putative integral membrane protein [Streptomyces roseosporus 
NRRL 11379]
 gi|291445152|ref|ZP_06584542.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
 gi|291348099|gb|EFE75003.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
Length=229

 Score = 79.3 bits (194),  Expect = 3e-13, Method: Compositional matrix adjust.
 Identities = 67/202 (34%), Positives = 106/202 (53%), Gaps = 11/202 (5%)

Query  4    IDIDREAAHQAAQRELDKPIYPKDSLT------KELTDWIDEQLYRILEKGSSIPGGWFT  57
            +D  R  A +AA+ EL KP+Y ++          +  DW+      + +  +    G   
Sbjct  21   VDTSRLPAREAAESELSKPMYHENDPNIVQRALNQFWDWV----AGVFDAAAGAAPGGPA  76

Query  58   ITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDA-GQLTAAQHRSTAESYAAEGNWAA  116
               +L+++++ + AA+     T + +      LFD+ G  +AAQHR+ AE++AA   W  
Sbjct  77   GLAVLVVIVVGLAAALWWRLGTPQGSSRSADALFDSTGPRSAAQHRAAAEAHAAALRWNE  136

Query  117  AIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGER  176
            A++ R++A+ R LEE  +L+P  GRTA+E A++AG  LP     L  AA +F+DVTYG R
Sbjct  137  AVQERMRAIVRSLEERALLDPRPGRTADEAAAEAGRTLPEHTARLRAAARSFDDVTYGGR  196

Query  177  PGTQGAYQMIADLDDHLRSRSP  198
               Q AY  +  LD  L    P
Sbjct  197  TADQSAYLSLRILDLELDEAKP  218


>gi|256396697|ref|YP_003118261.1| integral membrane protein [Catenulispora acidiphila DSM 44928]
 gi|256362923|gb|ACU76420.1| putative integral membrane protein [Catenulispora acidiphila 
DSM 44928]
Length=262

 Score = 79.3 bits (194),  Expect = 4e-13, Method: Compositional matrix adjust.
 Identities = 69/179 (39%), Positives = 98/179 (55%), Gaps = 7/179 (3%)

Query  4    IDIDREAAHQAAQRELDKPIYP--KDSLTKELTDWIDEQLYRILEKG----SSIPGGWFT  57
            IDI R+AA +AA  EL KP Y   + SLT+   DWI  +L  + +K     S      +T
Sbjct  16   IDIGRDAARRAAADELAKPAYAHARPSLTRRALDWIGHELTTLWDKAFGSGSGGGSRGWT  75

Query  58   ITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFD-AGQLTAAQHRSTAESYAAEGNWAA  116
              + ++ L++ V   ++     +R     D  LFD A  L AA +R  +E +AA G WA 
Sbjct  76   AVLAVLALLVVVAVVIRRRYGPVRRRVTDDQALFDEAATLDAAGYRRASEEHAAGGRWAE  135

Query  117  AIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGE  175
            A+R RL+AV   LEE  +L+P  GRTA+  A +AG +LP  A  L  AA  F+D+ YG+
Sbjct  136  AVRDRLRAVIAALEERAVLDPRPGRTADVAAREAGALLPEQAPALRAAARVFDDIWYGQ  194


>gi|312199841|ref|YP_004019902.1| integral membrane protein [Frankia sp. EuI1c]
 gi|311231177|gb|ADP84032.1| putative integral membrane protein [Frankia sp. EuI1c]
Length=220

 Score = 77.4 bits (189),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 93/200 (47%), Gaps = 14/200 (7%)

Query  6    IDREAAHQAAQRELDKPIYPKD-----SLTKELTDWIDEQLYRIL--EKGSSIPGGWFTI  58
            + R  A   A+REL + IY +           + DWID  L +I    +GS    G +T 
Sbjct  9    VTRPGAQDEARRELSRGIYGRQHPHQPGWLHRVVDWIDHLLSKIFIHTQGS----GDYTG  64

Query  59   TVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFD---AGQLTAAQHRSTAESYAAEGNWA  115
              LL  +++ V   V +        R    +  D   A  L+A   R+ AE  A  G +A
Sbjct  65   LGLLAGVLVVVALLVVLRLWLGPIRRSARSKAPDTDLASLLSAKALRAEAERLAQAGRYA  124

Query  116  AAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGE  175
             A+R RL+A+ R LEE G+L+P   RTA EL ++   V      EL  A T FNDV YG 
Sbjct  125  EAVRSRLRAIVRMLEEKGVLDPRPSRTAGELVTEVAAVGVTGQDELRLAVTVFNDVWYGG  184

Query  176  RPGTQGAYQMIADLDDHLRS  195
            RP     YQ +   D+ L S
Sbjct  185  RPADATGYQAVVRADEALTS  204


>gi|329935950|ref|ZP_08285751.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
 gi|329304557|gb|EGG48434.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length=240

 Score = 76.3 bits (186),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 79/208 (38%), Positives = 116/208 (56%), Gaps = 6/208 (2%)

Query  1    VPSIDIDREAAHQAAQRELDKPIYPKD--SLTKELTDWIDEQLYRILEKGSSI-PGGWFT  57
             P + + R+ A  AA+REL KP+Y +D  SL + + D   + L R+L   SS  PGG  T
Sbjct  21   TPPLTVPRDPARGAARRELTKPMYHQDDPSLLQRVLDAFWDWLDRLLGAASSAAPGG--T  78

Query  58   ITVLLILLMIAVTAAVQIAR-RTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAA  116
              +++ILL +    A    R  T R        LFD    +AA+HRS A ++AA G+W  
Sbjct  79   AGLVVILLAVLALLAALWWRLGTPRRTPASVPALFDDRPRSAAEHRSAAAAHAARGHWNT  138

Query  117  AIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGER  176
            A++ R++A+ R LEE  +L+P  GRTA+E A++A   LP  A  L  AA  F+DV YG R
Sbjct  139  AVQERMRALVRALEERALLDPRPGRTADEAAAEAARPLPGHASRLHAAARDFDDVAYGGR  198

Query  177  PGTQGAYQMIADLDDHLRSRSPAVVSAV  204
               +  Y+ +ADLD+ L    P + ++ 
Sbjct  199  TADEATYRRLADLDEDLAHARPQLAASA  226


>gi|288916535|ref|ZP_06410912.1| hypothetical protein FrEUN1fDRAFT_0605 [Frankia sp. EUN1f]
 gi|288352135|gb|EFC86335.1| hypothetical protein FrEUN1fDRAFT_0605 [Frankia sp. EUN1f]
Length=260

 Score = 74.7 bits (182),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 71/220 (33%), Positives = 104/220 (48%), Gaps = 27/220 (12%)

Query  1    VPSIDIDREAAHQAAQRELDKPIYPKD--SLTKELTDWIDEQLYRILEKGSSIPG---GW  55
            +P   + R+ A + A REL + IY  D          WI+++L  +    +  P    G 
Sbjct  20   LPGGPVTRDGAREEAHRELSRSIYRDDERGWFSRTIHWINDRLADLWNWLTPDPDSGLGG  79

Query  56   FTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFD----AGQLTAAQHRSTAESYAAE  111
            F    +L L+++ V   V +        R    +  D     G LTAAQ R+ + + A  
Sbjct  80   FQGLGVLALVIVLVALVVVLRVWLGPVRRSARLEQLDEATSPGPLTAAQLRALSRAQAER  139

Query  112  GNWAAAIRHRLQAVARELEETGMLNPAAGRTANELASD----AG--EVLPHLAGELTQ--  163
            G+ A A+R RL+A+AR LEE G+L+P  GRTANEL SD    AG    +  LAGE T   
Sbjct  140  GDHAEAVRSRLRAIARMLEERGVLDPRPGRTANELISDLRAVAGPPSTVRPLAGETTSGG  199

Query  164  ----------AATAFNDVTYGERPGTQGAYQMIADLDDHL  193
                      A   F+++ YG RP    AY+++   D+ L
Sbjct  200  PSDPIVTLAVAVEVFSEIWYGGRPANLEAYEVVVRADESL  239


>gi|182438313|ref|YP_001826032.1| putative integral membrane protein [Streptomyces griseus subsp. 
griseus NBRC 13350]
 gi|178466829|dbj|BAG21349.1| putative integral membrane protein [Streptomyces griseus subsp. 
griseus NBRC 13350]
Length=228

 Score = 74.3 bits (181),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 73/202 (37%), Positives = 112/202 (56%), Gaps = 12/202 (5%)

Query  4    IDIDREAAHQAAQRELDKPIYPKDS---LTKELT---DWIDEQLYRILEKGSSIPGGWFT  57
            +D  R  A +AA+ EL KP+Y ++    L + L    DW+      + +  +    G   
Sbjct  21   VDTPRLPAREAAESELSKPMYHENDPNFLQRALNRFWDWV----AGVFDAAAGAAPGGPA  76

Query  58   ITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDA-GQLTAAQHRSTAESYAAEGNWAA  116
              ++L++L+I + AA+     T + +R  +  LFD+ G  +AAQHR+ AE++A    W+ 
Sbjct  77   GLLVLVVLVIGLAAALWWRLGTPQRSRSKE-ALFDSDGPRSAAQHRAAAEAHATALRWSE  135

Query  117  AIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGER  176
            A++ R++AV R LEE  +L+P  GRTA+E A++AG  LP  A  L  AA +F+DVTYG R
Sbjct  136  AVQERMRAVVRSLEERALLDPRPGRTADEAAAEAGRALPEHAVRLRAAARSFDDVTYGGR  195

Query  177  PGTQGAYQMIADLDDHLRSRSP  198
               Q AY  +  LD  L    P
Sbjct  196  TADQPAYLSLRALDLELDEAKP  217


>gi|294629685|ref|ZP_06708245.1| integral membrane protein [Streptomyces sp. e14]
 gi|292833018|gb|EFF91367.1| integral membrane protein [Streptomyces sp. e14]
Length=144

 Score = 74.3 bits (181),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 52/119 (44%), Positives = 74/119 (63%), Gaps = 0/119 (0%)

Query  90   LFDAGQLTAAQHRSTAESYAAEGNWAAAIRHRLQAVARELEETGMLNPAAGRTANELASD  149
            LFD    +AA HR+ AE++AA+G+W+ A++ R++AV R LEE  +L+   GRTA+E A++
Sbjct  17   LFDDRPRSAADHRAAAEAHAAQGHWSQALQERMRAVVRSLEERALLDTRPGRTADEAAAE  76

Query  150  AGEVLPHLAGELTQAATAFNDVTYGERPGTQGAYQMIADLDDHLRSRSPAVVSAVQHPA  208
            AG  LP     L  AA  F+DVTYG R  T+ +Y+ IA LD  L    P +    + PA
Sbjct  77   AGRTLPGHTDRLHAAARDFDDVTYGGRTATEESYRRIAALDQELEHTRPQLDGDDRAPA  135


>gi|269128243|ref|YP_003301613.1| hypothetical protein Tcur_4046 [Thermomonospora curvata DSM 43183]
 gi|268313201|gb|ACY99575.1| hypothetical protein Tcur_4046 [Thermomonospora curvata DSM 43183]
Length=223

 Score = 72.8 bits (177),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 74/215 (35%), Positives = 104/215 (49%), Gaps = 30/215 (13%)

Query  6    IDREAAHQAAQRELDKPIYPKDSLT------KELTDWIDEQLYRILEKGSSIPG-----G  54
            I R+ A + A+RELDK IY +D  +      +   DW+ E    I  K ++ P      G
Sbjct  17   IGRDEARELARRELDKGIYHRDEPSWLERAWQSFGDWLRE----IFGKAAAPPSPGAESG  72

Query  55   WFTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGN-  113
            W ++ V+ +LL+ AV     + R        G   +  A Q       STA+ +      
Sbjct  73   WASLAVVFVLLVAAVAVVAWLMR--------GRRNIRAAAQAPPQDRPSTADDHRRAAER  124

Query  114  ------WAAAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATA  167
                  WA A+R RL+A+AR+LEE  +L P  GRTA+ELA++AG  LP  A  L      
Sbjct  125  HAAAGRWAQAVRERLRAIARDLEERLILAPRPGRTADELAAEAGAALPEHAERLRAGVRL  184

Query  168  FNDVTYGERPGTQGAYQMIADLDDHLRSRSPAVVS  202
            FND+ YG RP T   Y  +  LD+ LR+  P   S
Sbjct  185  FNDIWYGNRPATAEGYAALVALDEELRAARPGEPS  219


>gi|158317588|ref|YP_001510096.1| hypothetical protein Franean1_5844 [Frankia sp. EAN1pec]
 gi|158112993|gb|ABW15190.1| putative integral membrane protein [Frankia sp. EAN1pec]
Length=259

 Score = 71.6 bits (174),  Expect = 7e-11, Method: Compositional matrix adjust.
 Identities = 67/203 (34%), Positives = 103/203 (51%), Gaps = 19/203 (9%)

Query  6    IDREAAHQAAQRELDKPIYPK---DSLTKELTDWIDEQL---YRILEKGSSIPGGWFTIT  59
            + RE A   A+REL K +Y     D  T+ +T WI+++L   +  L   +    G F   
Sbjct  36   VTREGAQDEARRELSKSVYQDAQPDWFTRAIT-WINDRLADLWNWLTPDTGAGVGGFNGL  94

Query  60   VLLILLMIAVTAAVQI------ARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGN  113
             +L ++++ V  AV I       RRT R ++  +  L  +  LTA Q R  A   A +G 
Sbjct  95   GVLAVVLVLVALAVVIRLWLGPVRRTAR-DQAEETDL--SSPLTADQLRVLARDQAGQGA  151

Query  114  WAAAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLA---GELTQAATAFND  170
            +A A+R RL+A+ R LEE G+L+P  GRTA EL       +   +   G L  A   F++
Sbjct  152  YAEAVRSRLRAIVRMLEERGVLDPRPGRTAGELVDAVRAAIDRDSDAIGALVAAVEVFSE  211

Query  171  VTYGERPGTQGAYQMIADLDDHL  193
            + YG  P T+ AY+++   D+ L
Sbjct  212  IWYGGGPATEQAYEVLVRADEQL  234


>gi|323356979|ref|YP_004223375.1| hypothetical protein MTES_0531 [Microbacterium testaceum StLB037]
 gi|323273350|dbj|BAJ73495.1| hypothetical protein MTES_0531 [Microbacterium testaceum StLB037]
Length=223

 Score = 71.6 bits (174),  Expect = 7e-11, Method: Compositional matrix adjust.
 Identities = 70/202 (35%), Positives = 104/202 (52%), Gaps = 18/202 (8%)

Query  7    DREAAHQAAQRELDKPIY------PKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV  60
            D + A + A+REL  P Y      P D L + + D+  E     L + S+  G W    +
Sbjct  18   DADEAREWAERELSDPAYQAAEPTPIDRLARAVVDFFGE-----LPRNSAN-GEWGPPAL  71

Query  61   LLILLMIAVTAAVQIA----RRTMRTNRGGDYQLFDAGQLTAAQH-RSTAESYAAEGNWA  115
            +++ L++AV   + I      R +   +     LFD     +A+  R  AE+ AA G W 
Sbjct  72   IVLALILAVGIVIGILIWGRPRALARAQPPARALFDEDDGRSAEELRRDAEAAAARGEWD  131

Query  116  AAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGE  175
            AAI  R +A AR L E G+++P  G T +  A  A   LP L   L  AA+ F+DV Y  
Sbjct  132  AAIVLRFRAFARGLTERGLVDPPPGATVHTFARAAAAALPALGAGLDNAASLFDDVRYLR  191

Query  176  RPGTQGAYQMIADLD-DHLRSR  196
            RPGT+ +Y+++ADLD D +R+R
Sbjct  192  RPGTEKSYRVVADLDADAVRTR  213


>gi|111220757|ref|YP_711551.1| putative integral membrane protein [Frankia alni ACN14a]
 gi|111148289|emb|CAJ59961.1| putative integral membrane protein [Frankia alni ACN14a]
Length=253

 Score = 71.2 bits (173),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 46/128 (36%), Positives = 63/128 (50%), Gaps = 30/128 (23%)

Query  96   LTAAQHRSTAESYAAEGNWAAAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLP  155
            LTAAQ R+ A+ YA  G++A A+R RL+A+ R LEE G+L+P  GRTA EL ++   + P
Sbjct  105  LTAAQLRAEADRYATGGDYARAVRSRLRAIVRMLEEKGVLDPRPGRTAGELVAEVARITP  164

Query  156  ---------------------HLAGE---------LTQAATAFNDVTYGERPGTQGAYQM  185
                                  LAG          L  A   F+++ YG RP T   YQ+
Sbjct  165  AADRGPAGPAATVPGMPATDHDLAGASPAGDGRAALAAAVEVFSEIWYGGRPATAAGYQV  224

Query  186  IADLDDHL  193
            + D D  L
Sbjct  225  LVDADSAL  232


>gi|227497998|ref|ZP_03928174.1| integral membrane protein [Actinomyces urogenitalis DSM 15434]
 gi|226832588|gb|EEH64971.1| integral membrane protein [Actinomyces urogenitalis DSM 15434]
Length=221

 Score = 70.5 bits (171),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 62/173 (36%), Positives = 92/173 (54%), Gaps = 12/173 (6%)

Query  9    EAAHQAAQRELDKPIY-PKDSLTKELTDWIDEQLYRILEKGSSIPGG--WFTITVLLILL  65
            E A QAA  EL KP Y P+ SL +++  W    L   L+    IPG   W ++ ++ + L
Sbjct  24   EEARQAAVEELSKPAYHPRPSLLEQIWQW----LISHLQLTQVIPGAPAWLSMLIVAVAL  79

Query  66   MIAVTAAVQIARRTM---RTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRHRL  122
             + +   V + RR     R+ R G   LFD  + +AA  ++ A+  A  G+WA A+  R 
Sbjct  80   AVLLGLLVVLLRRVTLAGRSRRRG-ASLFDDDRDSAALTQA-ADQAARSGDWATAVVERF  137

Query  123  QAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGE  175
            +A+ R L+E G+++   G TA+E A  +   L  L GEL QAA  F+ V YGE
Sbjct  138  RAIIRSLDERGLIDDYPGMTAHEAAEVSAAALGTLGGELRQAANLFDSVRYGE  190



Lambda     K      H
   0.317    0.130    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 263865364408


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40