BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3690
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
gi|15843308|ref|NP_338345.1| hypothetical protein MT3792 [Mycoba... 442 1e-122
gi|15610826|ref|NP_218207.1| hypothetical protein Rv3690 [Mycoba... 440 6e-122
gi|340628663|ref|YP_004747115.1| hypothetical protein MCAN_37111... 439 1e-121
gi|240172917|ref|ZP_04751576.1| hypothetical protein MkanA1_2662... 354 5e-96
gi|118619433|ref|YP_907765.1| hypothetical protein MUL_4273 [Myc... 328 3e-88
gi|296166775|ref|ZP_06849197.1| integral membrane protein [Mycob... 307 8e-82
gi|254820807|ref|ZP_05225808.1| hypothetical protein MintA_12813... 305 3e-81
gi|342861947|ref|ZP_08718591.1| hypothetical protein MCOL_23770 ... 276 2e-72
gi|41406459|ref|NP_959295.1| hypothetical protein MAP0361c [Myco... 263 1e-68
gi|118462573|ref|YP_879699.1| hypothetical protein MAV_0414 [Myc... 255 3e-66
gi|118473014|ref|YP_890436.1| integral membrane protein [Mycobac... 236 2e-60
gi|315446332|ref|YP_004079211.1| hypothetical protein Mspyr1_483... 233 2e-59
gi|108801821|ref|YP_642018.1| hypothetical protein Mmcs_4858 [My... 227 1e-57
gi|169627495|ref|YP_001701144.1| hypothetical protein MAB_0391c ... 220 1e-55
gi|120406400|ref|YP_956229.1| hypothetical protein Mvan_5453 [My... 216 2e-54
gi|145221931|ref|YP_001132609.1| hypothetical protein Mflv_1339 ... 211 7e-53
gi|271962951|ref|YP_003337147.1| hypothetical protein Sros_1410 ... 157 9e-37
gi|333992609|ref|YP_004525223.1| hypothetical protein JDM601_396... 150 1e-34
gi|300783066|ref|YP_003763357.1| hypothetical protein AMED_1140 ... 115 6e-24
gi|297194036|ref|ZP_06911434.1| integral membrane protein [Strep... 110 1e-22
gi|72162897|ref|YP_290554.1| integral membrane protein [Thermobi... 103 2e-20
gi|328882805|emb|CCA56044.1| putative integral membrane protein ... 100 1e-19
gi|345000057|ref|YP_004802911.1| putative integral membrane prot... 95.5 5e-18
gi|29831603|ref|NP_826237.1| integral membrane protein [Streptom... 94.4 9e-18
gi|296394410|ref|YP_003659294.1| hypothetical protein Srot_2007 ... 94.4 9e-18
gi|302560330|ref|ZP_07312672.1| integral membrane protein [Strep... 93.6 2e-17
gi|317508342|ref|ZP_07966017.1| hypothetical protein HMPREF9336_... 92.8 3e-17
gi|297200108|ref|ZP_06917505.1| integral membrane protein [Strep... 89.0 4e-16
gi|311896325|dbj|BAJ28733.1| hypothetical protein KSE_29220 [Kit... 87.0 1e-15
gi|333920343|ref|YP_004493924.1| integral membrane protein [Amyc... 87.0 2e-15
gi|297562677|ref|YP_003681651.1| integral membrane protein [Noca... 86.7 2e-15
gi|291439272|ref|ZP_06578662.1| integral membrane protein [Strep... 86.3 3e-15
gi|302551836|ref|ZP_07304178.1| integral membrane protein [Strep... 85.9 4e-15
gi|326778964|ref|ZP_08238229.1| putative integral membrane prote... 83.2 2e-14
gi|284029585|ref|YP_003379516.1| hypothetical protein Kfla_1622 ... 83.2 3e-14
gi|21221459|ref|NP_627238.1| integral membrane protein [Streptom... 82.4 4e-14
gi|289771255|ref|ZP_06530633.1| integral membrane protein [Strep... 82.0 5e-14
gi|290959914|ref|YP_003491096.1| protein [Streptomyces scabiei 8... 80.5 2e-13
gi|239988168|ref|ZP_04708832.1| putative integral membrane prote... 79.3 3e-13
gi|256396697|ref|YP_003118261.1| integral membrane protein [Cate... 79.3 4e-13
gi|312199841|ref|YP_004019902.1| integral membrane protein [Fran... 77.4 1e-12
gi|329935950|ref|ZP_08285751.1| integral membrane protein [Strep... 76.3 3e-12
gi|288916535|ref|ZP_06410912.1| hypothetical protein FrEUN1fDRAF... 74.7 1e-11
gi|182438313|ref|YP_001826032.1| putative integral membrane prot... 74.3 1e-11
gi|294629685|ref|ZP_06708245.1| integral membrane protein [Strep... 74.3 1e-11
gi|269128243|ref|YP_003301613.1| hypothetical protein Tcur_4046 ... 72.8 3e-11
gi|158317588|ref|YP_001510096.1| hypothetical protein Franean1_5... 71.6 7e-11
gi|323356979|ref|YP_004223375.1| hypothetical protein MTES_0531 ... 71.6 7e-11
gi|111220757|ref|YP_711551.1| putative integral membrane protein... 71.2 1e-10
gi|227497998|ref|ZP_03928174.1| integral membrane protein [Actin... 70.5 2e-10
>gi|15843308|ref|NP_338345.1| hypothetical protein MT3792 [Mycobacterium tuberculosis CDC1551]
gi|253800734|ref|YP_003033735.1| hypothetical protein TBMG_03732 [Mycobacterium tuberculosis KZN
1435]
gi|254233187|ref|ZP_04926513.1| hypothetical protein TBCG_03614 [Mycobacterium tuberculosis C]
gi|13883668|gb|AAK48159.1| hypothetical protein MT3792 [Mycobacterium tuberculosis CDC1551]
gi|124602980|gb|EAY61255.1| hypothetical protein TBCG_03614 [Mycobacterium tuberculosis C]
gi|253322237|gb|ACT26840.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435]
Length=233
Score = 442 bits (1138), Expect = 1e-122, Method: Compositional matrix adjust.
Identities = 217/217 (100%), Positives = 217/217 (100%), Gaps = 0/217 (0%)
Query 1 VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV 60
VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV
Sbjct 17 VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV 76
Query 61 LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH 120
LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH
Sbjct 77 LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH 136
Query 121 RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ 180
RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ
Sbjct 137 RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ 196
Query 181 GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR 217
GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR
Sbjct 197 GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR 233
>gi|15610826|ref|NP_218207.1| hypothetical protein Rv3690 [Mycobacterium tuberculosis H37Rv]
gi|31794861|ref|NP_857354.1| hypothetical protein Mb3715 [Mycobacterium bovis AF2122/97]
gi|121639604|ref|YP_979828.1| hypothetical protein BCG_3749 [Mycobacterium bovis BCG str. Pasteur
1173P2]
72 more sequence titles
Length=217
Score = 440 bits (1132), Expect = 6e-122, Method: Compositional matrix adjust.
Identities = 216/217 (99%), Positives = 217/217 (100%), Gaps = 0/217 (0%)
Query 1 VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV 60
+PSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV
Sbjct 1 MPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV 60
Query 61 LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH 120
LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH
Sbjct 61 LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH 120
Query 121 RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ 180
RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ
Sbjct 121 RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ 180
Query 181 GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR 217
GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR
Sbjct 181 GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR 217
>gi|340628663|ref|YP_004747115.1| hypothetical protein MCAN_37111 [Mycobacterium canettii CIPT
140010059]
gi|340006853|emb|CCC46042.1| putative conserved membrane protein [Mycobacterium canettii CIPT
140010059]
Length=217
Score = 439 bits (1129), Expect = 1e-121, Method: Compositional matrix adjust.
Identities = 215/217 (99%), Positives = 217/217 (100%), Gaps = 0/217 (0%)
Query 1 VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV 60
+PSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV
Sbjct 1 MPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV 60
Query 61 LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH 120
LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH
Sbjct 61 LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH 120
Query 121 RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ 180
RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPG+Q
Sbjct 121 RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGSQ 180
Query 181 GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR 217
GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR
Sbjct 181 GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR 217
>gi|240172917|ref|ZP_04751576.1| hypothetical protein MkanA1_26627 [Mycobacterium kansasii ATCC
12478]
Length=216
Score = 354 bits (909), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 172/217 (80%), Positives = 195/217 (90%), Gaps = 1/217 (0%)
Query 1 VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV 60
+PSIDIDR+AAHQAAQ ELDKPIYPK SL+ +DW++EQLYR+LEKG+S+ GGWFT+TV
Sbjct 1 MPSIDIDRDAAHQAAQHELDKPIYPKPSLSTAFSDWLNEQLYRLLEKGASVSGGWFTLTV 60
Query 61 LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH 120
L IL +IAV AV IARRTMRTNRGGDYQLFDAGQLTAAQHR+TAE++AA+GNWAAAIRH
Sbjct 61 LFILAVIAVIVAVHIARRTMRTNRGGDYQLFDAGQLTAAQHRATAEAFAAQGNWAAAIRH 120
Query 121 RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ 180
RL+AVARELEETG+LNPA GRTANELA+DAG LPHLAGEL +AATAFNDVTYGERPGTQ
Sbjct 121 RLRAVARELEETGVLNPAPGRTANELATDAGAALPHLAGELVRAATAFNDVTYGERPGTQ 180
Query 181 GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR 217
+YQ+IADLDDHLRSR+ A SAV+ PA DSWAQVR
Sbjct 181 DSYQLIADLDDHLRSRAHA-SSAVERPAAPDSWAQVR 216
>gi|118619433|ref|YP_907765.1| hypothetical protein MUL_4273 [Mycobacterium ulcerans Agy99]
gi|183985169|ref|YP_001853460.1| hypothetical protein MMAR_5200 [Mycobacterium marinum M]
gi|118571543|gb|ABL06294.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
gi|183178495|gb|ACC43605.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=216
Score = 328 bits (841), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 175/217 (81%), Positives = 196/217 (91%), Gaps = 1/217 (0%)
Query 1 VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV 60
+PSIDIDR+AAHQAAQRELDKPIYPK SL++ L DWI+E LYR+LEKGSS+ GGWFTITV
Sbjct 1 MPSIDIDRDAAHQAAQRELDKPIYPKSSLSQHLNDWINELLYRLLEKGSSVSGGWFTITV 60
Query 61 LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH 120
L+ILL+IAV A+ IARRT+RTNRGGDYQLFDAGQLTAAQHR+TA+ YAA+GNWAAAIRH
Sbjct 61 LVILLVIAVVVAINIARRTLRTNRGGDYQLFDAGQLTAAQHRATAQGYAADGNWAAAIRH 120
Query 121 RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ 180
RL+AVARELEETG+LNPA GRTANELA+DAG+VLP+LAGEL QAA AFNDVTYGERPGT+
Sbjct 121 RLRAVARELEETGVLNPAPGRTANELANDAGDVLPYLAGELAQAAAAFNDVTYGERPGTE 180
Query 181 GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR 217
AYQ+IADLDDHLRSRS A S V PA DSWAQVR
Sbjct 181 AAYQLIADLDDHLRSRSTASPS-VGRPAPSDSWAQVR 216
>gi|296166775|ref|ZP_06849197.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897872|gb|EFG77456.1| integral membrane protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=217
Score = 307 bits (786), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 157/217 (73%), Positives = 188/217 (87%), Gaps = 0/217 (0%)
Query 1 VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV 60
+PSIDIDR+AAHQAAQ EL+KPIY K S T+++ +W++E ++R+L+K +S+PGGW T TV
Sbjct 1 MPSIDIDRDAAHQAAQDELNKPIYSKGSATEQIAEWLNETIFRLLQKAASLPGGWLTATV 60
Query 61 LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH 120
L+ILL +A+ AV +ARRTMRTNRGGDY+LF+A QLTAAQHR+TAE +AA+G+WAAAIRH
Sbjct 61 LVILLGVALAVAVHVARRTMRTNRGGDYRLFEAAQLTAAQHRATAEDFAAQGDWAAAIRH 120
Query 121 RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ 180
RL+AVAR+LEETG+LNPA GRTANELASDAG LPHLA ELTQ ATAFNDVTYGE+PGTQ
Sbjct 121 RLRAVARQLEETGVLNPAPGRTANELASDAGAALPHLADELTQGATAFNDVTYGEQPGTQ 180
Query 181 GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR 217
AYQ+IADLDDHLRSR+ AV HPA DSWAQVR
Sbjct 181 SAYQLIADLDDHLRSRAAAVAPGPAHPAAPDSWAQVR 217
>gi|254820807|ref|ZP_05225808.1| hypothetical protein MintA_12813 [Mycobacterium intracellulare
ATCC 13950]
Length=217
Score = 305 bits (781), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 151/217 (70%), Positives = 178/217 (83%), Gaps = 0/217 (0%)
Query 1 VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV 60
+PSIDIDR+AAH+AAQ EL+KPIY K S + DW+++ +YR+L+K +++PGGWFT TV
Sbjct 1 MPSIDIDRDAAHRAAQDELNKPIYSKGSSADQFLDWLNDLIYRMLQKTATVPGGWFTATV 60
Query 61 LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH 120
LLILL IAV A +ARRTMR RGGD LF+A QLTAAQHR+TAESYAAEG+WAAAIRH
Sbjct 61 LLILLAIAVFVAFHVARRTMRARRGGDQLLFEAAQLTAAQHRATAESYAAEGDWAAAIRH 120
Query 121 RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ 180
RL+AVAR+LEETG+L A GRTANELA DAG LPHLA EL++AATAFNDVTYGE+PGT+
Sbjct 121 RLRAVARQLEETGVLAAAPGRTANELARDAGTALPHLADELSEAATAFNDVTYGEQPGTR 180
Query 181 GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR 217
AYQMIADLDDHLRSR + PAV +SWAQVR
Sbjct 181 AAYQMIADLDDHLRSRWQGAPAEAGRPAVPESWAQVR 217
>gi|342861947|ref|ZP_08718591.1| hypothetical protein MCOL_23770 [Mycobacterium colombiense CECT
3035]
gi|342130487|gb|EGT83796.1| hypothetical protein MCOL_23770 [Mycobacterium colombiense CECT
3035]
Length=217
Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/220 (69%), Positives = 177/220 (81%), Gaps = 6/220 (2%)
Query 1 VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV 60
+PSID+DR+AAH+AAQ EL+KPIY K S + DW+++ +YR+L+K S++PGGW T TV
Sbjct 1 MPSIDVDRDAAHRAAQDELNKPIYSKGSAREHFVDWLNDLIYRLLQKTSALPGGWLTATV 60
Query 61 LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH 120
L ILL IAV A + + RRTMRT RGGDY LF+A QLTAAQHR+TAES+AAEG+WAAAIRH
Sbjct 61 LFILLAIAVIAGIYVLRRTMRTRRGGDYALFEAAQLTAAQHRATAESFAAEGDWAAAIRH 120
Query 121 RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ 180
RL+AVAR+LEETG+L A GRTANELA DAG LPHLAGELTQAATAFNDVTYGE+PGTQ
Sbjct 121 RLRAVARQLEETGVLTAAPGRTANELARDAGAALPHLAGELTQAATAFNDVTYGEQPGTQ 180
Query 181 GAYQMIADLDDHLRSR---SPAVVSAVQHPAVFDSWAQVR 217
AY+MIA+LDDHLRSR P P +SWAQVR
Sbjct 181 DAYRMIAELDDHLRSRWQGGPLEPGRAHAP---ESWAQVR 217
>gi|41406459|ref|NP_959295.1| hypothetical protein MAP0361c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394808|gb|AAS02678.1| hypothetical protein MAP_0361c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460865|gb|EGO39750.1| hypothetical protein MAPs_36880 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=217
Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/217 (68%), Positives = 171/217 (79%), Gaps = 0/217 (0%)
Query 1 VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV 60
+PSIDIDR+AAH+AA EL KPIY K S +L W+++ +YR+L+K S++PGGW T TV
Sbjct 1 MPSIDIDRDAAHRAAADELHKPIYSKGSTPSQLVAWLNDAIYRMLQKISTVPGGWLTATV 60
Query 61 LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH 120
L +LL IA AV RRTMRT RGGD+ LF+A LTAAQHR+TAES AAEG+WAAAIRH
Sbjct 61 LFLLLAIAAVVAVHTLRRTMRTRRGGDHMLFEAAPLTAAQHRATAESCAAEGDWAAAIRH 120
Query 121 RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ 180
RL+AVAR+LEETG+L A GRTANELA DAG LPHLAGEL QAATAFNDVTYGE+PGTQ
Sbjct 121 RLRAVARQLEETGVLTAAPGRTANELARDAGAALPHLAGELAQAATAFNDVTYGEQPGTQ 180
Query 181 GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR 217
AYQ+IADLD+HLRSR V P V +SWAQVR
Sbjct 181 AAYQLIADLDEHLRSRWQGVTPPPGQPVVAESWAQVR 217
>gi|118462573|ref|YP_879699.1| hypothetical protein MAV_0414 [Mycobacterium avium 104]
gi|254773419|ref|ZP_05214935.1| hypothetical protein MaviaA2_01901 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118163860|gb|ABK64757.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=217
Score = 255 bits (652), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/217 (68%), Positives = 171/217 (79%), Gaps = 0/217 (0%)
Query 1 VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV 60
+PSIDIDR+AAH+AA EL KPIY K S +L W+++ +YR+L+K S++PGGW T TV
Sbjct 1 MPSIDIDRDAAHRAAADELHKPIYSKGSTPSQLVAWLNDAIYRMLQKISTVPGGWLTATV 60
Query 61 LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH 120
L +LL IA AV I RRTMRT RGGD+ LF+A LTAAQHR+TAES AAE +WAAAIRH
Sbjct 61 LFLLLAIAAVVAVHILRRTMRTRRGGDHLLFEAAPLTAAQHRATAESCAAERDWAAAIRH 120
Query 121 RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ 180
RL+AVAR+LEETG+L A GRTANELA DAG LPHLAGEL QAATAFNDVTYGE+PGTQ
Sbjct 121 RLRAVARQLEETGVLTAAPGRTANELARDAGAALPHLAGELAQAATAFNDVTYGEQPGTQ 180
Query 181 GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR 217
AYQ+IADLD+HLRSR V P V +SWAQVR
Sbjct 181 AAYQLIADLDEHLRSRWQGVTPPPGQPVVAESWAQVR 217
>gi|118473014|ref|YP_890436.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
gi|118174301|gb|ABK75197.1| integral membrane protein [Mycobacterium smegmatis str. MC2 155]
Length=216
Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 158/215 (74%), Gaps = 1/215 (0%)
Query 3 SIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITVLL 62
+IDIDR+AAH AAQ EL+KPIYP+ SLT++ DWIDE LYR+ +GS++PGGWFTI+VL
Sbjct 3 TIDIDRDAAHDAAQNELNKPIYPRSSLTQQFLDWIDELLYRLAYEGSTVPGGWFTISVLA 62
Query 63 ILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRHRL 122
IL+++AV AV++ARR MRTNR + LF +L+AA+HR TA+ YAA+ NWAAAIRHRL
Sbjct 63 ILVVVAVLVAVRMARRAMRTNRDA-HTLFGRTELSAAEHRQTADGYAAQENWAAAIRHRL 121
Query 123 QAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQGA 182
+AVAR LEETG LNP GRTA ELA DAG LP L+GEL AAT FNDVTYGE+PGT+
Sbjct 122 RAVARHLEETGTLNPVPGRTATELARDAGAALPALSGELAAAATTFNDVTYGEQPGTEDD 181
Query 183 YQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR 217
Y+ IADLD L ++ W QVR
Sbjct 182 YRRIADLDGRLLHAGHRAAGSMPSIPADSGWTQVR 216
>gi|315446332|ref|YP_004079211.1| hypothetical protein Mspyr1_48390 [Mycobacterium sp. Spyr1]
gi|315264635|gb|ADU01377.1| hypothetical protein Mspyr1_48390 [Mycobacterium sp. Spyr1]
Length=217
Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/220 (55%), Positives = 153/220 (70%), Gaps = 10/220 (4%)
Query 3 SIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITVLL 62
++DIDR+AAH AAQ EL K IYPK S L++W DE LYR+ + IPGGWFT+ VL+
Sbjct 3 TVDIDRDAAHDAAQAELSKSIYPKPSPMDLLSEWFDELLYRLTAGAAKIPGGWFTVAVLI 62
Query 63 ILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRHRL 122
+LL +AV A++IARR MR++RGGD LF L+AA+HR+TAE YAA G+WA A+RHR+
Sbjct 63 VLLAVAVIVAIRIARRAMRSSRGGDPALFGDQTLSAAEHRATAERYAAAGDWAPAVRHRV 122
Query 123 QAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQGA 182
+A+AR+LEE G+L+P GRTA ELA AG LP L G AA FNDVTYGE+P T+
Sbjct 123 RAIARQLEENGVLDPVPGRTATELARTAGRTLPALTGAFITAAETFNDVTYGEQPATEPQ 182
Query 183 YQMIADLDDHL---RSRSPAVVSA--VQHPAVFDSWAQVR 217
Y+M+A LDD + RS SP+ + Q P WA+VR
Sbjct 183 YRMLAALDDSVGTQRSPSPSGTDSRDPQQP-----WAEVR 217
>gi|108801821|ref|YP_642018.1| hypothetical protein Mmcs_4858 [Mycobacterium sp. MCS]
gi|119870974|ref|YP_940926.1| hypothetical protein Mkms_4947 [Mycobacterium sp. KMS]
gi|126437790|ref|YP_001073481.1| hypothetical protein Mjls_5226 [Mycobacterium sp. JLS]
gi|108772240|gb|ABG10962.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119697063|gb|ABL94136.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126237590|gb|ABO00991.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=216
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/217 (57%), Positives = 168/217 (78%), Gaps = 1/217 (0%)
Query 1 VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV 60
+P++DIDR+AAH+AAQ+ELDKPIYP+ SLT L++ +++ ++RI + G+ +PGGW TI+V
Sbjct 1 MPTVDIDRDAAHEAAQKELDKPIYPRASLTDRLSELLEDLIHRIAQGGAGVPGGWLTISV 60
Query 61 LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH 120
L++L+++AV AV+IARR MRT+RG + L+ +L+AA+HR+TAE YAA G WA AIRH
Sbjct 61 LVLLILVAVVVAVRIARRAMRTDRG-EPSLYGGHELSAAEHRTTAEQYAASGQWALAIRH 119
Query 121 RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ 180
RL+A+AR+LEE+G+L P GRTA ELA+DAG LP L+ EL AATAFNDVTYG+RPGT+
Sbjct 120 RLRAIARQLEESGVLTPVPGRTATELANDAGLALPALSDELRDAATAFNDVTYGDRPGTE 179
Query 181 GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR 217
AY+ +A LDDH+R+ P A P WA+VR
Sbjct 180 AAYRSVAVLDDHIRAAGPTPGHASGVPRAATGWAEVR 216
>gi|169627495|ref|YP_001701144.1| hypothetical protein MAB_0391c [Mycobacterium abscessus ATCC
19977]
gi|169239462|emb|CAM60490.1| Conserved hypothetical membrane protein [Mycobacterium abscessus]
Length=214
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/217 (52%), Positives = 152/217 (71%), Gaps = 3/217 (1%)
Query 1 VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV 60
+P+IDIDR++A +AA REL KPIY S L +WI +QL + + +PGGWFTI V
Sbjct 1 MPAIDIDRDSAAEAAHRELAKPIYEHPSPIDRLINWIFDQLDYLEFRAGELPGGWFTILV 60
Query 61 LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH 120
++++ A V+IARR +RT G D+ LF++G+LTAA+HR+ AE A++G+W++AIRH
Sbjct 61 TTLVVIAAAVLLVRIARRAVRTRGGADFGLFESGELTAAEHRAAAELAASQGDWSSAIRH 120
Query 121 RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ 180
RL+AVAR+LEE +L P GRTANELA+DAG LP LA E AA FNDV+YG+RPGT+
Sbjct 121 RLRAVARQLEERTILTPVPGRTANELAADAGRELPSLAAEFRAAAEIFNDVSYGDRPGTE 180
Query 181 GAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR 217
+Y+ IADLDDH+R +P + SA + W VR
Sbjct 181 QSYRKIADLDDHIRD-APVLASAAESGTT--GWEAVR 214
>gi|120406400|ref|YP_956229.1| hypothetical protein Mvan_5453 [Mycobacterium vanbaalenii PYR-1]
gi|119959218|gb|ABM16223.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=216
Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/215 (57%), Positives = 156/215 (73%), Gaps = 1/215 (0%)
Query 3 SIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITVLL 62
+IDIDR+AA +AAQ EL K IYPK S L DWI++ LYR+ + PGGW+T+ VLL
Sbjct 3 TIDIDRDAAQEAAQNELAKAIYPKPSPMDMLYDWIEQLLYRLTASAAKFPGGWYTVAVLL 62
Query 63 ILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRHRL 122
+LL++AV AV+IARR MR++R LF L+AA+HR+TAE +AA G+WA A+RHR+
Sbjct 63 VLLVVAVVVAVRIARRAMRSDRSTGPALFGDHILSAAEHRATAERHAASGDWAPAVRHRV 122
Query 123 QAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQGA 182
+A+AR+LEE G+L+P GRTA ELA AG LP L+GEL+ AA FNDVTYGE+P T+
Sbjct 123 RAIARQLEENGVLDPVPGRTATELARAAGRALPALSGELSTAADTFNDVTYGEQPATEPQ 182
Query 183 YQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQVR 217
Y+MIA LDDHL SR+P+ V AV A WA+VR
Sbjct 183 YRMIAALDDHLGSRTPSSV-AVHADAAHQPWAEVR 216
>gi|145221931|ref|YP_001132609.1| hypothetical protein Mflv_1339 [Mycobacterium gilvum PYR-GCK]
gi|145214417|gb|ABP43821.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length=217
Score = 211 bits (536), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 119/220 (55%), Positives = 153/220 (70%), Gaps = 10/220 (4%)
Query 3 SIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITVLL 62
++DIDR+AAH AAQ EL K IYPK S L++W DE LYR+ + IPGGWFT+ VL+
Sbjct 3 TVDIDRDAAHDAAQAELSKSIYPKPSPMDLLSEWFDELLYRLTAGAAKIPGGWFTVAVLV 62
Query 63 ILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRHRL 122
+LL +AV A++IARR MR++RGGD LF L+AA+HR+TAE YAA G+WA A+RHR+
Sbjct 63 VLLAVAVIVAIRIARRAMRSSRGGDPALFGDQTLSAAEHRATAERYAAAGDWAPAVRHRV 122
Query 123 QAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQGA 182
+A+AR+LEE G+L+P GRTA ELA AG LP L G AA FNDVTYGE+P T+
Sbjct 123 RAIARQLEENGVLDPVPGRTATELARTAGRTLPALTGAFITAAETFNDVTYGEQPATEPQ 182
Query 183 YQMIADLDDHL---RSRSPAVVSA--VQHPAVFDSWAQVR 217
Y+M+A LDD + RS SP+ + Q P WA+VR
Sbjct 183 YRMLAALDDSVGTQRSPSPSGTDSRDPQQP-----WAEVR 217
>gi|271962951|ref|YP_003337147.1| hypothetical protein Sros_1410 [Streptosporangium roseum DSM
43021]
gi|270506126|gb|ACZ84404.1| hypothetical protein Sros_1410 [Streptosporangium roseum DSM
43021]
Length=223
Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 90/196 (46%), Positives = 123/196 (63%), Gaps = 1/196 (0%)
Query 4 IDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGS-SIPGGWFTITVLL 62
IDIDR+ A + A +EL KP Y K+SL + + L +L++ S + G VL
Sbjct 17 IDIDRDQARREALQELLKPEYAKESLIDRAMRAVSQFLGDLLDQESVGVVGSVAARVVLA 76
Query 63 ILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRHRL 122
++++ A+TA V IARR R +F + TAA+HR AE AAE WA A+R RL
Sbjct 77 VIVIAAITAVVTIARRATRGGAVRQDGIFGDRRRTAAEHRDAAERLAAESRWAEAVRERL 136
Query 123 QAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQGA 182
+AVAR+LE+ +++ GRTA ELA++AG VLP AGELT AA F+DVTYGE PGT A
Sbjct 137 RAVARDLEDRAIVDSTPGRTAGELAAEAGRVLPAFAGELTTAARVFDDVTYGEVPGTAEA 196
Query 183 YQMIADLDDHLRSRSP 198
Y+++ DLD+ LR+ P
Sbjct 197 YEVLRDLDERLRTARP 212
>gi|333992609|ref|YP_004525223.1| hypothetical protein JDM601_3969 [Mycobacterium sp. JDM601]
gi|333488577|gb|AEF37969.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=202
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/193 (55%), Positives = 143/193 (75%), Gaps = 1/193 (0%)
Query 1 VPSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV 60
+P++DIDREAA +AA+REL KPIYP+ S ++ D+++ + R++ +G+ +PGGWFTI+V
Sbjct 1 MPTVDIDREAAREAAERELAKPIYPRPSPKQQFIDFLETLVQRLILRGAELPGGWFTISV 60
Query 61 LLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRH 120
LLILL AV AAV + RR +R RG D +LF Q +AA++R+TA+ AA G+W AIRH
Sbjct 61 LLILLAAAVVAAVTVGRRMLRDGRG-DQRLFGTTQRSAAEYRATAQHCAAAGDWGEAIRH 119
Query 121 RLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQ 180
L+AVARELEETG+L+ A GRTA ELA DAG LP LA L +AA FNDV+YGE P T
Sbjct 120 GLRAVARELEETGVLHAAPGRTATELARDAGAALPALADALLRAAETFNDVSYGELPATP 179
Query 181 GAYQMIADLDDHL 193
Y+++AD+D+ +
Sbjct 180 DGYRIVADIDEQV 192
>gi|300783066|ref|YP_003763357.1| hypothetical protein AMED_1140 [Amycolatopsis mediterranei U32]
gi|299792580|gb|ADJ42955.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340524445|gb|AEK39650.1| hypothetical protein RAM_05790 [Amycolatopsis mediterranei S699]
Length=213
Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/206 (38%), Positives = 122/206 (60%), Gaps = 5/206 (2%)
Query 1 VPSIDIDREAAHQAAQRELDKPIY--PKDSLTKELTDWIDEQLYRILEKGSS-IPGGWFT 57
VP +DIDR+AA +AA+ EL P Y + +++ W+ EQL ++L SS +PGG F
Sbjct 9 VP-VDIDRDAARRAAEEELSDPKYRDARPGFLQQIGQWLGEQLEKLLNSLSSDVPGGIFG 67
Query 58 ITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAA 117
+ +L+ LL++ V + + R G +F + A+ +R AE AA G + A
Sbjct 68 VVLLVALLIVLVVVIRLRTGKMAASARAGSV-VFGGPRKNASDYRRAAEEAAAAGRFDDA 126
Query 118 IRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERP 177
+R R +AV R LEE +L+ +GRTA+E A++AG +LP++A +L Q A F+DV YG R
Sbjct 127 VRDRFRAVVRALEERALLDARSGRTADEAAAEAGLLLPNVADQLRQGARLFDDVHYGGRE 186
Query 178 GTQGAYQMIADLDDHLRSRSPAVVSA 203
GT+ AY+ + +LD+ R P ++A
Sbjct 187 GTEAAYRTLTELDERCRRERPVAMAA 212
>gi|297194036|ref|ZP_06911434.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
gi|197722593|gb|EDY66501.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
Length=228
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/211 (37%), Positives = 120/211 (57%), Gaps = 11/211 (5%)
Query 1 VPSIDIDREAAHQAAQRELDKPIYPKDS---LTKELT---DWIDEQLYRILEKGSSIPGG 54
VP +D R+ A +AA+REL +P+Y ++ L + L +W+D L+ G+ PGG
Sbjct 19 VP-VDTPRDPAREAAERELSRPMYHENDPNLLERALDRFWEWVD-GLFGAASSGA--PGG 74
Query 55 WFTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNW 114
+ ++++++ A + RT R D LF+ G +A+ HRS ++ +AA W
Sbjct 75 VIGLIAIILVVLALAAALWWRLGKPQRTVRTAD-SLFEEGPRSASAHRSASDKHAAAERW 133
Query 115 AAAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYG 174
A++ R++A+ R LEE +L+P GRTA+E A++AG LPH A EL AA F+DVTYG
Sbjct 134 NQAVQERMRAIVRSLEERTLLDPRPGRTADEAAAEAGRTLPHHADELRAAARVFDDVTYG 193
Query 175 ERPGTQGAYQMIADLDDHLRSRSPAVVSAVQ 205
R + AY+ + DLD L + P +A +
Sbjct 194 GRTADRQAYERLRDLDLDLENSKPLSATAAE 224
>gi|72162897|ref|YP_290554.1| integral membrane protein [Thermobifida fusca YX]
gi|71916629|gb|AAZ56531.1| putative integral membrane protein [Thermobifida fusca YX]
Length=203
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/200 (38%), Positives = 107/200 (54%), Gaps = 5/200 (2%)
Query 6 IDREAAHQAAQRELDKPIY--PKDSLTKELTDWIDEQLYRILEKG-SSIPGGWFTITVLL 62
+ RE + A EL P+Y + SL W+D L +L +++PGGW+T+ LL
Sbjct 2 VSREEGARLAWEELSDPVYDEARPSLLDLFFRWVDRLLGELLGAAQTALPGGWWTLGALL 61
Query 63 ILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRHRL 122
++L + V A + R R L AG L+ + R+ A+ +AA G +A AIR RL
Sbjct 62 VVLALLVAALLWYLRPGRAARRA--AVLDSAGTLSTDEQRALADEHAARGAYAEAIRERL 119
Query 123 QAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQGA 182
+AV R+LE+ +L P GRTA E A + V P EL + A FNDV YG+R T
Sbjct 120 RAVVRDLEDHAVLTPRLGRTATEWAVETSAVFPDQRTELHRVAALFNDVWYGDREATAEG 179
Query 183 YQMIADLDDHLRSRSPAVVS 202
Y+++ LDD LR PA+ S
Sbjct 180 YRLVCALDDTLRRALPALPS 199
>gi|328882805|emb|CCA56044.1| putative integral membrane protein [Streptomyces venezuelae ATCC
10712]
Length=230
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/207 (36%), Positives = 106/207 (52%), Gaps = 9/207 (4%)
Query 4 IDIDREAAHQAAQRELDKPIYPKDSLT------KELTDWIDEQLYRILEKGSSIPGGWFT 57
+DI R A +AA+REL KP+Y ++ +W+DE + PGG
Sbjct 22 VDISRIPAREAAERELSKPMYHENDPNLLQRGLDRFWEWLDELFG---AASGATPGGVLG 78
Query 58 ITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAA 117
+ V+++L+ A R R G LF G TA HRS AE +AA G W A
Sbjct 79 LVVVVLLVAAVAAALWWRLGTPHRAPRTGGDSLFADGPRTARDHRSAAERHAAAGRWNQA 138
Query 118 IRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERP 177
++ R++A+ R LEE +L+P GRTA+E A++A LP A +L A AF+DVTYG R
Sbjct 139 VQERMRAIVRSLEERTLLDPRPGRTADEAAAEASRALPSHADDLRLAVRAFDDVTYGGRT 198
Query 178 GTQGAYQMIADLDDHLRSRSPAVVSAV 204
+ AY+ + +LD L P + A
Sbjct 199 ADEPAYRRVEELDTALERTRPTLDPAT 225
>gi|345000057|ref|YP_004802911.1| putative integral membrane protein [Streptomyces sp. SirexAA-E]
gi|344315683|gb|AEN10371.1| putative integral membrane protein [Streptomyces sp. SirexAA-E]
Length=229
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/201 (33%), Positives = 100/201 (50%), Gaps = 10/201 (4%)
Query 4 IDIDREAAHQAAQRELDKPIYPK---DSLTKELT---DWIDEQLYRILEKGSSIPGGWFT 57
+DI R A +AAQ EL P+Y + + L + L DW+ + G
Sbjct 21 VDIPRVPAREAAQDELSDPMYHEHDPNLLERGLDRFWDWVGDLFDGAAGAAPGGSLGLVV 80
Query 58 ITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAA 117
I +++ L+ A+ + +R R LF +AA HR A+++A W A
Sbjct 81 IMLIIAGLVAALWWRLGTPQRVARPPEA----LFGGAARSAADHRKAAQAHADAHRWTEA 136
Query 118 IRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERP 177
++ R++A+ R LE+ +L+P GRTA+E AS+AG LP A L AA F+DVTYG R
Sbjct 137 VQERMRALVRALEDRAVLDPRPGRTADEAASEAGRALPAHASRLRSAARVFDDVTYGGRT 196
Query 178 GTQGAYQMIADLDDHLRSRSP 198
AYQ ++ LD + + P
Sbjct 197 ADAAAYQDLSALDRDIEAAKP 217
>gi|29831603|ref|NP_826237.1| integral membrane protein [Streptomyces avermitilis MA-4680]
gi|29608719|dbj|BAC72772.1| putative integral membrane protein [Streptomyces avermitilis
MA-4680]
Length=239
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/208 (38%), Positives = 115/208 (56%), Gaps = 12/208 (5%)
Query 2 PSIDIDREAAHQAAQRELDKPIYPKDSLT------KELTDWIDEQLYRILEKGSS-IPGG 54
P + I R+ A +AA+REL K +Y K+ + DW+D R+ S+ PGG
Sbjct 22 PPVTIPRDPAREAARRELSKRMYHKNDPSLFERALNAFWDWVD----RLFNAASTATPGG 77
Query 55 WFTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNW 114
+ V+ +L ++AV A+ T LF+ +AA+HR+ AE++AA+G+W
Sbjct 78 ALGLLVI-VLAVLAVGGALWWRLGTPGRAPLPAAALFEDRPRSAAEHRAAAEAHAAQGHW 136
Query 115 AAAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYG 174
A++ R++AV R LEE +L+ GRTA+E AS+AG LP A L AA F+DVTYG
Sbjct 137 NQAVQERMRAVVRSLEERALLDVRPGRTADEAASEAGRTLPVHAERLRAAARDFDDVTYG 196
Query 175 ERPGTQGAYQMIADLDDHLRSRSPAVVS 202
R +G YQ +A LD + P ++S
Sbjct 197 GRAAGEGTYQRLAALDADVDRTRPVLMS 224
>gi|296394410|ref|YP_003659294.1| hypothetical protein Srot_2007 [Segniliparus rotundus DSM 44985]
gi|296181557|gb|ADG98463.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985]
Length=239
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/194 (36%), Positives = 107/194 (56%), Gaps = 5/194 (2%)
Query 3 SIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITVLL 62
++++DRE A QAAQREL P Y + ++ DW+ S W + L
Sbjct 2 TVEVDREPARQAAQRELTDPRYEHRTWWEDFVDWLGRHALDRSSHAHSHDSFWDANVMPL 61
Query 63 ILLMIAVTAAVQIARRTMRTNRGGDYQ--LFD--AGQLTAAQ-HRSTAESYAAEGNWAAA 117
++L++ + + R RG + +F+ + +L++A+ HR+ A A+ G+W+AA
Sbjct 62 LVLLVVLMLGALVVFFARRATRGTAKKKTIFEDESAELSSAEEHRARARRAASAGDWSAA 121
Query 118 IRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERP 177
I R++AV +EL+E L GRTA+E A A +LP L T AA AF++V YGERP
Sbjct 122 IAERVRAVVKELDERSALALTPGRTADEFAFLASGLLPELQDGFTAAARAFDEVVYGERP 181
Query 178 GTQGAYQMIADLDD 191
G++ AYQ A LD+
Sbjct 182 GSERAYQEAARLDE 195
>gi|302560330|ref|ZP_07312672.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
gi|302477948|gb|EFL41041.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
Length=236
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/207 (35%), Positives = 113/207 (55%), Gaps = 10/207 (4%)
Query 2 PSIDIDREAAHQAAQRELDKPIYPKDSLT------KELTDWIDEQLYRILEKGSSIPGGW 55
P + + R+ A AA+REL K +Y ++ + W+D+ ++ PGG
Sbjct 19 PPVTVPRDPARDAARRELSKGMYHENDPSWFQRALDAFWGWVDDLFG---AASTATPGGA 75
Query 56 FTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWA 115
+ +++I ++AV A+ T R LFD +AA+HR+ AE++AA+ +W
Sbjct 76 LGL-IVVIAAVLAVLGALWWRLGTPRRRATSAPALFDDRPRSAAEHRAAAEAHAAQSHWN 134
Query 116 AAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGE 175
A++ R++AV R LEE +L+P GRTA+E A++AG LP G L AA F+DVTYG
Sbjct 135 QAVQERMRAVVRALEERALLDPRPGRTADEAAAEAGRALPDHTGRLHTAARVFDDVTYGG 194
Query 176 RPGTQGAYQMIADLDDHLRSRSPAVVS 202
R T+ +Y+ +A LD L P + +
Sbjct 195 RTATEQSYRQLAALDHDLERAKPRLAT 221
>gi|317508342|ref|ZP_07966017.1| hypothetical protein HMPREF9336_02389 [Segniliparus rugosus ATCC
BAA-974]
gi|316253366|gb|EFV12761.1| hypothetical protein HMPREF9336_02389 [Segniliparus rugosus ATCC
BAA-974]
Length=220
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/193 (34%), Positives = 104/193 (54%), Gaps = 5/193 (2%)
Query 4 IDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITVLLI 63
+++DR+ A +AAQREL P Y + + DW+ + + G G W + L+
Sbjct 1 MEVDRDPAKEAAQRELTDPRYEHRTWWDDFIDWLGRRTSDRVLNGHRHSGFWDGNLMPLL 60
Query 64 LLMIAVTAAVQI---ARRTMRT--NRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAI 118
+L++ + I ARR R +G ++ ++ +HR A++ A G+WA AI
Sbjct 61 VLLVILVLGALIGYYARRATRGAPKKGALFEDEAEELSSSEEHRQRAKASALAGDWATAI 120
Query 119 RHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPG 178
R++A +EL+E +L GRTA+E A AG +LP L G+L A+ AF++V YG R G
Sbjct 121 AERMRAAVKELDERTVLALTPGRTADEFAFLAGGLLPELEGDLANASGAFDEVVYGGRAG 180
Query 179 TQGAYQMIADLDD 191
++ Y +A LD+
Sbjct 181 SERTYLDVARLDE 193
>gi|297200108|ref|ZP_06917505.1| integral membrane protein [Streptomyces sviceus ATCC 29083]
gi|297147580|gb|EDY59449.2| integral membrane protein [Streptomyces sviceus ATCC 29083]
Length=242
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/210 (34%), Positives = 112/210 (54%), Gaps = 12/210 (5%)
Query 2 PSIDIDREAAHQAAQRELDKPIYPKDSLT------KELTDWIDEQLYRILEKGSS-IPGG 54
P + I R+ A +AA+REL K +Y ++ + DW+ ++ + SS PGG
Sbjct 19 PPLTIPRDPAREAARRELFKRMYHENDPSWFQRALNAFWDWVG----KLFDAASSATPGG 74
Query 55 WFTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNW 114
+ V++ + + V A+ T R LFD +AA HR+ AE++AA+ +W
Sbjct 75 ALGLVVVIAAIAL-VVGALWWRLGTPRREPASSAALFDDRPRSAADHRAAAEAHAAQRHW 133
Query 115 AAAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYG 174
A++ R++A+ R LEE +L+ GRTA+E A++AG LP L AA F+DVTYG
Sbjct 134 NQALQERMRAIVRSLEERALLDVRPGRTADEAAAEAGRALPSHTDRLRSAARDFDDVTYG 193
Query 175 ERPGTQGAYQMIADLDDHLRSRSPAVVSAV 204
R T+ +Y IA+LD L P + ++
Sbjct 194 GRAATEQSYDRIAELDRALERTKPVLANST 223
>gi|311896325|dbj|BAJ28733.1| hypothetical protein KSE_29220 [Kitasatospora setae KM-6054]
Length=225
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/206 (36%), Positives = 113/206 (55%), Gaps = 7/206 (3%)
Query 4 IDIDREAAHQAAQRELDKPIYPK--DSLTKELTDWIDEQLYRILEKGSSIPGGWFTITVL 61
++ R+AA AA EL K +Y + + + DW+ Q+ R ++ G S P G L
Sbjct 16 VETPRDAARDAAHEELRKAVYHQHEPGVVERFVDWVQHQISRAVD-GVSTPLGGGGNAAL 74
Query 62 LILLMIAVTAAVQIARRTMRTNRGGDY--QLFDA--GQLTAAQHRSTAESYAAEGNWAAA 117
+L+++A+ + RR R +LF G +AA HR+ A ++AA G W A
Sbjct 75 ALLIVLALVLGFVLWRRYGAPRRAARATGKLFTGPEGPRSAAGHRADAAAHAAAGAWEDA 134
Query 118 IRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERP 177
+R +++A+ R LEE +L P GRTA+E A++AG LP A EL AA F+D+ +G+RP
Sbjct 135 VREQMRALVRALEERTVLAPRPGRTADEAAAEAGRALPDHARELASAARLFDDIAFGDRP 194
Query 178 GTQGAYQMIADLDDHLRSRSPAVVSA 203
+ AY+++ADLD L P V A
Sbjct 195 ADERAYRLLADLDQTLGRTRPVAVPA 220
>gi|333920343|ref|YP_004493924.1| integral membrane protein [Amycolicicoccus subflavus DQS3-9A1]
gi|333482564|gb|AEF41124.1| Integral membrane protein [Amycolicicoccus subflavus DQS3-9A1]
Length=220
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/222 (32%), Positives = 116/222 (53%), Gaps = 20/222 (9%)
Query 1 VPSIDIDREAAHQAAQRELDKPIYPK------DSLTKELTDWIDEQLYRILEKGSSI-PG 53
VP ++IDR++A + A+ EL + +Y + + + L D + + + I + +++ PG
Sbjct 9 VP-VEIDRDSAREVARTELSRSMYTEAQPTLLERVMMWLLDRVQDAIDAIFDGANALAPG 67
Query 54 GWFTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGN 113
G ++ +LL +++ A R R+ R +F + +AA+HR A++ AA G+
Sbjct 68 GPGSLVILLAIMITAAIIIRLRMGRVARSTRM-RRAIFSETRRSAAEHRRLADAAAAVGD 126
Query 114 WAAAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTY 173
A+ R +A+ R LEE G+++ AAG+TA E+A AGE L A L AA F+DV Y
Sbjct 127 LDEAVHERFRAIVRALEERGVVDDAAGQTATEVAVRAGEELIGCAEPLRSAARTFDDVYY 186
Query 174 GERPGTQGAYQMIADLDDHLRSRSPAVVSAVQHPAVFDSWAQ 215
G R +G Y DD +R+ + VQ + DS Q
Sbjct 187 GHRSAARGVY------DDLVRTD-----ALVQSAPLIDSEKQ 217
>gi|297562677|ref|YP_003681651.1| integral membrane protein [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296847125|gb|ADH69145.1| putative integral membrane protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length=207
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/196 (34%), Positives = 108/196 (56%), Gaps = 4/196 (2%)
Query 5 DIDREAAHQAAQRELDKPIYPKD--SLTKELTDWIDEQLYRILEKGSSIPGGWFTITVLL 62
++ RE + A EL P+Y + SL W+ E L ++ + GGW T+ L
Sbjct 8 EVTREEGQRRAVEELSDPLYGEQEPSLWDRFLSWLQELLADLVSQAPDALGGW-TVLGPL 66
Query 63 ILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRHRL 122
++++ + + + R R+ R G + + + AA HR+ A+ + G +AAA+ RL
Sbjct 67 LVVVAVLVVWLVLWLRPTRSRRAG-APVHEGAPMDAADHRAAADRHERAGEFAAAVTERL 125
Query 123 QAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERPGTQGA 182
+A++ +LEE ++ P AGRTA ELA++A VL A L++ A FNDV YG+RP T +
Sbjct 126 RAISVDLEERAIITPRAGRTATELAAEASAVLTAEAEGLSEGARIFNDVAYGDRPATADS 185
Query 183 YQMIADLDDHLRSRSP 198
+++ +LD LR+ P
Sbjct 186 ARLLRELDTRLRAARP 201
>gi|291439272|ref|ZP_06578662.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
gi|291342167|gb|EFE69123.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length=238
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/210 (35%), Positives = 114/210 (55%), Gaps = 14/210 (6%)
Query 2 PSIDIDREAAHQAAQRELDKPIYPKDSLTKELTDWIDEQLYRILE--------KGSSIPG 53
P + + R+ A +AA+REL K +Y ++ W L E ++ PG
Sbjct 19 PPVTLPRDPAREAARRELSKRMYHEND-----PGWFQRALDAFWEWVGDLFATASTATPG 73
Query 54 GWFTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGN 113
G + V++ ++ + A+ T R LFD +AA+HR+ AE++AA+G+
Sbjct 74 GTLGLIVVIAAVVAVL-GALWWRLGTPRRQPASAPALFDDRPRSAAEHRAAAEAHAAQGH 132
Query 114 WAAAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTY 173
W A+R R++A+ R LEE +L+ GRTA+E A++AG LP A L AA +F+DVTY
Sbjct 133 WNQAVRERMRAIVRSLEERALLDVRPGRTADEAAAEAGRALPAHADPLHAAARSFDDVTY 192
Query 174 GERPGTQGAYQMIADLDDHLRSRSPAVVSA 203
G R T+ +Y+ +ADLD L +P + S+
Sbjct 193 GGRAATEQSYRHLADLDRALERATPQLTSS 222
>gi|302551836|ref|ZP_07304178.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
gi|302469454|gb|EFL32547.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
Length=245
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/209 (37%), Positives = 117/209 (56%), Gaps = 6/209 (2%)
Query 2 PSIDIDREAAHQAAQRELDKPIYPKD--SLTKELTDWIDEQLYRILEKGSS-IPGGWFTI 58
P + R+ A +AA+REL K +Y ++ SL + D + L ++L S+ PGG T+
Sbjct 27 PPLTTPRDPAREAARRELSKRMYHENDPSLIQRALDAFWDWLGKLLNAASTATPGG--TL 84
Query 59 TVLLILLMIAVTAAVQIAR-RTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAA 117
+++++L + A R T R LFD +AA HR+ AE++AA+G+W A
Sbjct 85 GLVVVILAVVALVAALWWRLGTPRRRPTSSATLFDDRPRSAADHRAAAEAHAAQGHWNQA 144
Query 118 IRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERP 177
++ R++A+ R LEE +L+ GRTA+E A++AG LP L AA F+DVTYG R
Sbjct 145 VQERMRALVRALEERALLDVRPGRTADEAAAEAGRALPAHTDRLRAAARDFDDVTYGGRS 204
Query 178 GTQGAYQMIADLDDHLRSRSPAVVSAVQH 206
T+ AY I +LD L P +V++ H
Sbjct 205 ATEQAYHRITELDRDLERTKPRLVTSSAH 233
>gi|326778964|ref|ZP_08238229.1| putative integral membrane protein [Streptomyces cf. griseus
XylebKG-1]
gi|326659297|gb|EGE44143.1| putative integral membrane protein [Streptomyces griseus XylebKG-1]
Length=229
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/202 (36%), Positives = 110/202 (55%), Gaps = 11/202 (5%)
Query 4 IDIDREAAHQAAQRELDKPIYPKDS---LTKELT---DWIDEQLYRILEKGSSIPGGWFT 57
+D R A +AA+ EL KP+Y ++ L + L DW+ + + + G
Sbjct 21 VDTPRLPAREAAESELSKPMYHENDPNFLQRALNRFWDWVAG----VFDAAAGAAPGGPA 76
Query 58 ITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDA-GQLTAAQHRSTAESYAAEGNWAA 116
++L++L+I + AA+ T + + LFD+ G +AAQHR+ AE++A W+
Sbjct 77 GLLVLVVLIIGLAAALWWRLGTPQRSFWSKEALFDSDGPRSAAQHRAAAEAHATALRWSE 136
Query 117 AIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGER 176
A++ R++AV R LEE +L+P GRTA+E A++AG LP A L AA +F+DVTYG R
Sbjct 137 AVQERMRAVVRSLEERALLDPRPGRTADEAAAEAGRALPEHAVRLRAAARSFDDVTYGGR 196
Query 177 PGTQGAYQMIADLDDHLRSRSP 198
Q AY + LD L P
Sbjct 197 TADQPAYLSLRALDLELDEAKP 218
>gi|284029585|ref|YP_003379516.1| hypothetical protein Kfla_1622 [Kribbella flavida DSM 17836]
gi|283808878|gb|ADB30717.1| hypothetical protein Kfla_1622 [Kribbella flavida DSM 17836]
Length=216
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/186 (38%), Positives = 97/186 (53%), Gaps = 4/186 (2%)
Query 2 PSIDIDREAAHQAAQRELDKPIYPK--DSLTKELTDWIDEQLYRILEKGSSIPGGWFTIT 59
P +D R+ A A REL KP Y + DSL + + E + +L+ S T
Sbjct 10 PPVDTTRDEAAAEATRELSKPAYGQAGDSLVSKAVQKVLEWIADLLDGLVSPSTDGKTGL 69
Query 60 VLLILLMIAVTAAVQIARRTMRTNRGGDYQ-LFDAGQ-LTAAQHRSTAESYAAEGNWAAA 117
VLL+ L+ + V +RT+ Q +FD+ + +AAQ+R+ AE AA G++ AA
Sbjct 70 VLLLGLIALIAVVVLWRAGVLRTSGSSANQAVFDSERPRSAAQYRAQAEQEAAGGDFTAA 129
Query 118 IRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERP 177
+R R +A EL E +L+ AGRTA E +DAG +P L L AA F +V YG RP
Sbjct 130 VRSRFRACVAELTERTVLDERAGRTAYEAVADAGRAVPALRDPLRPAADVFTEVAYGNRP 189
Query 178 GTQGAY 183
GT Y
Sbjct 190 GTPERY 195
>gi|21221459|ref|NP_627238.1| integral membrane protein [Streptomyces coelicolor A3(2)]
gi|7799211|emb|CAB90927.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
Length=231
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/209 (34%), Positives = 114/209 (55%), Gaps = 10/209 (4%)
Query 2 PSIDIDREAAHQAAQRELDKPIYPKDSLT------KELTDWIDEQLYRILEKGSSIPGGW 55
P + I R+ A AA+REL K +Y ++ + DW++E + K S+ G
Sbjct 8 PPVTIPRDPARDAARRELSKRMYHENDPSWFQRALNAFWDWVEE----LFSKASTATPGG 63
Query 56 FTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWA 115
V++++ ++A A+ T R LFD +AA HR+ A+++AA+G+W
Sbjct 64 TLGLVVVVVAVLAALGALWWRLGTPRRGPVSAPTLFDNRPRSAADHRAAAQAHAAQGHWN 123
Query 116 AAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGE 175
A++ R++AV R LEE +L+ GRTA+E A++AG LP L AA F+DV YG
Sbjct 124 QAVQERMRAVVRALEERALLDIRPGRTADEAATEAGRSLPDHKDRLRAAARDFDDVAYGG 183
Query 176 RPGTQGAYQMIADLDDHLRSRSPAVVSAV 204
RPG++ +Y+ + +LD L P +VS+
Sbjct 184 RPGSEESYRHLTELDHDLDRSKPHLVSST 212
>gi|289771255|ref|ZP_06530633.1| integral membrane protein [Streptomyces lividans TK24]
gi|289701454|gb|EFD68883.1| integral membrane protein [Streptomyces lividans TK24]
Length=239
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/209 (34%), Positives = 114/209 (55%), Gaps = 10/209 (4%)
Query 2 PSIDIDREAAHQAAQRELDKPIYPKDSLT------KELTDWIDEQLYRILEKGSSIPGGW 55
P + I R+ A AA+REL K +Y ++ + DW++E + K S+ G
Sbjct 16 PPVTIPRDPARDAARRELSKRMYHENDPSWFQRALNAFWDWVEE----LFSKASTATPGG 71
Query 56 FTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWA 115
V++++ ++A A+ T R LFD +AA HR+ A+++AA+G+W
Sbjct 72 TLGLVVVVVAVLAALGALWWRLGTPRRGPVSAPTLFDDRPRSAADHRAAAQAHAAQGHWN 131
Query 116 AAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGE 175
A++ R++AV R LEE +L+ GRTA+E A++AG LP L AA F+DV YG
Sbjct 132 QAVQERMRAVVRALEERALLDIRPGRTADEAATEAGRSLPDHKDRLRAAARDFDDVAYGG 191
Query 176 RPGTQGAYQMIADLDDHLRSRSPAVVSAV 204
RPG++ +Y+ + +LD L P +VS+
Sbjct 192 RPGSEESYRHLTELDHDLDRSKPHLVSST 220
>gi|290959914|ref|YP_003491096.1| protein [Streptomyces scabiei 87.22]
gi|260649440|emb|CBG72555.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length=238
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/207 (36%), Positives = 110/207 (54%), Gaps = 6/207 (2%)
Query 2 PSIDIDREAAHQAAQRELDKPIYPKD--SLTKELTDWIDEQLYRILEKGSS-IPGGWFTI 58
P + + R+ A +AA+REL K +Y ++ S + D E L ++ S+ PGG T+
Sbjct 21 PPLTLPRDPAREAARRELSKGMYHQNDPSWYERAMDAFWEWLDKVFGAASAATPGG--TL 78
Query 59 TVLLILLMIAVTAAVQIAR-RTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAA 117
+++I+L + R R LFD +AA+HR+ AE+ AA+G+W A
Sbjct 79 GLVVIVLAVLALLGALWWRLGAPRRAPASSAVLFDDRPRSAAEHRAAAEAQAAQGHWNQA 138
Query 118 IRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGERP 177
++ R++ V R LEE +L+ GRTA+E AS+AG LP A L AA F+DVTYG R
Sbjct 139 VQERMRGVVRSLEERALLDVRPGRTADEAASEAGTSLPAHADRLHTAARDFDDVTYGGRS 198
Query 178 GTQGAYQMIADLDDHLRSRSPAVVSAV 204
++ Y +A LD L P S+
Sbjct 199 ASEETYLRLAALDTDLERARPVTASST 225
>gi|239988168|ref|ZP_04708832.1| putative integral membrane protein [Streptomyces roseosporus
NRRL 11379]
gi|291445152|ref|ZP_06584542.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
gi|291348099|gb|EFE75003.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
Length=229
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/202 (34%), Positives = 106/202 (53%), Gaps = 11/202 (5%)
Query 4 IDIDREAAHQAAQRELDKPIYPKDSLT------KELTDWIDEQLYRILEKGSSIPGGWFT 57
+D R A +AA+ EL KP+Y ++ + DW+ + + + G
Sbjct 21 VDTSRLPAREAAESELSKPMYHENDPNIVQRALNQFWDWV----AGVFDAAAGAAPGGPA 76
Query 58 ITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDA-GQLTAAQHRSTAESYAAEGNWAA 116
+L+++++ + AA+ T + + LFD+ G +AAQHR+ AE++AA W
Sbjct 77 GLAVLVVIVVGLAAALWWRLGTPQGSSRSADALFDSTGPRSAAQHRAAAEAHAAALRWNE 136
Query 117 AIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGER 176
A++ R++A+ R LEE +L+P GRTA+E A++AG LP L AA +F+DVTYG R
Sbjct 137 AVQERMRAIVRSLEERALLDPRPGRTADEAAAEAGRTLPEHTARLRAAARSFDDVTYGGR 196
Query 177 PGTQGAYQMIADLDDHLRSRSP 198
Q AY + LD L P
Sbjct 197 TADQSAYLSLRILDLELDEAKP 218
>gi|256396697|ref|YP_003118261.1| integral membrane protein [Catenulispora acidiphila DSM 44928]
gi|256362923|gb|ACU76420.1| putative integral membrane protein [Catenulispora acidiphila
DSM 44928]
Length=262
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/179 (39%), Positives = 98/179 (55%), Gaps = 7/179 (3%)
Query 4 IDIDREAAHQAAQRELDKPIYP--KDSLTKELTDWIDEQLYRILEKG----SSIPGGWFT 57
IDI R+AA +AA EL KP Y + SLT+ DWI +L + +K S +T
Sbjct 16 IDIGRDAARRAAADELAKPAYAHARPSLTRRALDWIGHELTTLWDKAFGSGSGGGSRGWT 75
Query 58 ITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFD-AGQLTAAQHRSTAESYAAEGNWAA 116
+ ++ L++ V ++ +R D LFD A L AA +R +E +AA G WA
Sbjct 76 AVLAVLALLVVVAVVIRRRYGPVRRRVTDDQALFDEAATLDAAGYRRASEEHAAGGRWAE 135
Query 117 AIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGE 175
A+R RL+AV LEE +L+P GRTA+ A +AG +LP A L AA F+D+ YG+
Sbjct 136 AVRDRLRAVIAALEERAVLDPRPGRTADVAAREAGALLPEQAPALRAAARVFDDIWYGQ 194
>gi|312199841|ref|YP_004019902.1| integral membrane protein [Frankia sp. EuI1c]
gi|311231177|gb|ADP84032.1| putative integral membrane protein [Frankia sp. EuI1c]
Length=220
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 93/200 (47%), Gaps = 14/200 (7%)
Query 6 IDREAAHQAAQRELDKPIYPKD-----SLTKELTDWIDEQLYRIL--EKGSSIPGGWFTI 58
+ R A A+REL + IY + + DWID L +I +GS G +T
Sbjct 9 VTRPGAQDEARRELSRGIYGRQHPHQPGWLHRVVDWIDHLLSKIFIHTQGS----GDYTG 64
Query 59 TVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFD---AGQLTAAQHRSTAESYAAEGNWA 115
LL +++ V V + R + D A L+A R+ AE A G +A
Sbjct 65 LGLLAGVLVVVALLVVLRLWLGPIRRSARSKAPDTDLASLLSAKALRAEAERLAQAGRYA 124
Query 116 AAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGE 175
A+R RL+A+ R LEE G+L+P RTA EL ++ V EL A T FNDV YG
Sbjct 125 EAVRSRLRAIVRMLEEKGVLDPRPSRTAGELVTEVAAVGVTGQDELRLAVTVFNDVWYGG 184
Query 176 RPGTQGAYQMIADLDDHLRS 195
RP YQ + D+ L S
Sbjct 185 RPADATGYQAVVRADEALTS 204
>gi|329935950|ref|ZP_08285751.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329304557|gb|EGG48434.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length=240
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/208 (38%), Positives = 116/208 (56%), Gaps = 6/208 (2%)
Query 1 VPSIDIDREAAHQAAQRELDKPIYPKD--SLTKELTDWIDEQLYRILEKGSSI-PGGWFT 57
P + + R+ A AA+REL KP+Y +D SL + + D + L R+L SS PGG T
Sbjct 21 TPPLTVPRDPARGAARRELTKPMYHQDDPSLLQRVLDAFWDWLDRLLGAASSAAPGG--T 78
Query 58 ITVLLILLMIAVTAAVQIAR-RTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAA 116
+++ILL + A R T R LFD +AA+HRS A ++AA G+W
Sbjct 79 AGLVVILLAVLALLAALWWRLGTPRRTPASVPALFDDRPRSAAEHRSAAAAHAARGHWNT 138
Query 117 AIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGER 176
A++ R++A+ R LEE +L+P GRTA+E A++A LP A L AA F+DV YG R
Sbjct 139 AVQERMRALVRALEERALLDPRPGRTADEAAAEAARPLPGHASRLHAAARDFDDVAYGGR 198
Query 177 PGTQGAYQMIADLDDHLRSRSPAVVSAV 204
+ Y+ +ADLD+ L P + ++
Sbjct 199 TADEATYRRLADLDEDLAHARPQLAASA 226
>gi|288916535|ref|ZP_06410912.1| hypothetical protein FrEUN1fDRAFT_0605 [Frankia sp. EUN1f]
gi|288352135|gb|EFC86335.1| hypothetical protein FrEUN1fDRAFT_0605 [Frankia sp. EUN1f]
Length=260
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/220 (33%), Positives = 104/220 (48%), Gaps = 27/220 (12%)
Query 1 VPSIDIDREAAHQAAQRELDKPIYPKD--SLTKELTDWIDEQLYRILEKGSSIPG---GW 55
+P + R+ A + A REL + IY D WI+++L + + P G
Sbjct 20 LPGGPVTRDGAREEAHRELSRSIYRDDERGWFSRTIHWINDRLADLWNWLTPDPDSGLGG 79
Query 56 FTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFD----AGQLTAAQHRSTAESYAAE 111
F +L L+++ V V + R + D G LTAAQ R+ + + A
Sbjct 80 FQGLGVLALVIVLVALVVVLRVWLGPVRRSARLEQLDEATSPGPLTAAQLRALSRAQAER 139
Query 112 GNWAAAIRHRLQAVARELEETGMLNPAAGRTANELASD----AG--EVLPHLAGELTQ-- 163
G+ A A+R RL+A+AR LEE G+L+P GRTANEL SD AG + LAGE T
Sbjct 140 GDHAEAVRSRLRAIARMLEERGVLDPRPGRTANELISDLRAVAGPPSTVRPLAGETTSGG 199
Query 164 ----------AATAFNDVTYGERPGTQGAYQMIADLDDHL 193
A F+++ YG RP AY+++ D+ L
Sbjct 200 PSDPIVTLAVAVEVFSEIWYGGRPANLEAYEVVVRADESL 239
>gi|182438313|ref|YP_001826032.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178466829|dbj|BAG21349.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
Length=228
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/202 (37%), Positives = 112/202 (56%), Gaps = 12/202 (5%)
Query 4 IDIDREAAHQAAQRELDKPIYPKDS---LTKELT---DWIDEQLYRILEKGSSIPGGWFT 57
+D R A +AA+ EL KP+Y ++ L + L DW+ + + + G
Sbjct 21 VDTPRLPAREAAESELSKPMYHENDPNFLQRALNRFWDWV----AGVFDAAAGAAPGGPA 76
Query 58 ITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDA-GQLTAAQHRSTAESYAAEGNWAA 116
++L++L+I + AA+ T + +R + LFD+ G +AAQHR+ AE++A W+
Sbjct 77 GLLVLVVLVIGLAAALWWRLGTPQRSRSKE-ALFDSDGPRSAAQHRAAAEAHATALRWSE 135
Query 117 AIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGER 176
A++ R++AV R LEE +L+P GRTA+E A++AG LP A L AA +F+DVTYG R
Sbjct 136 AVQERMRAVVRSLEERALLDPRPGRTADEAAAEAGRALPEHAVRLRAAARSFDDVTYGGR 195
Query 177 PGTQGAYQMIADLDDHLRSRSP 198
Q AY + LD L P
Sbjct 196 TADQPAYLSLRALDLELDEAKP 217
>gi|294629685|ref|ZP_06708245.1| integral membrane protein [Streptomyces sp. e14]
gi|292833018|gb|EFF91367.1| integral membrane protein [Streptomyces sp. e14]
Length=144
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/119 (44%), Positives = 74/119 (63%), Gaps = 0/119 (0%)
Query 90 LFDAGQLTAAQHRSTAESYAAEGNWAAAIRHRLQAVARELEETGMLNPAAGRTANELASD 149
LFD +AA HR+ AE++AA+G+W+ A++ R++AV R LEE +L+ GRTA+E A++
Sbjct 17 LFDDRPRSAADHRAAAEAHAAQGHWSQALQERMRAVVRSLEERALLDTRPGRTADEAAAE 76
Query 150 AGEVLPHLAGELTQAATAFNDVTYGERPGTQGAYQMIADLDDHLRSRSPAVVSAVQHPA 208
AG LP L AA F+DVTYG R T+ +Y+ IA LD L P + + PA
Sbjct 77 AGRTLPGHTDRLHAAARDFDDVTYGGRTATEESYRRIAALDQELEHTRPQLDGDDRAPA 135
>gi|269128243|ref|YP_003301613.1| hypothetical protein Tcur_4046 [Thermomonospora curvata DSM 43183]
gi|268313201|gb|ACY99575.1| hypothetical protein Tcur_4046 [Thermomonospora curvata DSM 43183]
Length=223
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/215 (35%), Positives = 104/215 (49%), Gaps = 30/215 (13%)
Query 6 IDREAAHQAAQRELDKPIYPKDSLT------KELTDWIDEQLYRILEKGSSIPG-----G 54
I R+ A + A+RELDK IY +D + + DW+ E I K ++ P G
Sbjct 17 IGRDEARELARRELDKGIYHRDEPSWLERAWQSFGDWLRE----IFGKAAAPPSPGAESG 72
Query 55 WFTITVLLILLMIAVTAAVQIARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGN- 113
W ++ V+ +LL+ AV + R G + A Q STA+ +
Sbjct 73 WASLAVVFVLLVAAVAVVAWLMR--------GRRNIRAAAQAPPQDRPSTADDHRRAAER 124
Query 114 ------WAAAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATA 167
WA A+R RL+A+AR+LEE +L P GRTA+ELA++AG LP A L
Sbjct 125 HAAAGRWAQAVRERLRAIARDLEERLILAPRPGRTADELAAEAGAALPEHAERLRAGVRL 184
Query 168 FNDVTYGERPGTQGAYQMIADLDDHLRSRSPAVVS 202
FND+ YG RP T Y + LD+ LR+ P S
Sbjct 185 FNDIWYGNRPATAEGYAALVALDEELRAARPGEPS 219
>gi|158317588|ref|YP_001510096.1| hypothetical protein Franean1_5844 [Frankia sp. EAN1pec]
gi|158112993|gb|ABW15190.1| putative integral membrane protein [Frankia sp. EAN1pec]
Length=259
Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/203 (34%), Positives = 103/203 (51%), Gaps = 19/203 (9%)
Query 6 IDREAAHQAAQRELDKPIYPK---DSLTKELTDWIDEQL---YRILEKGSSIPGGWFTIT 59
+ RE A A+REL K +Y D T+ +T WI+++L + L + G F
Sbjct 36 VTREGAQDEARRELSKSVYQDAQPDWFTRAIT-WINDRLADLWNWLTPDTGAGVGGFNGL 94
Query 60 VLLILLMIAVTAAVQI------ARRTMRTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGN 113
+L ++++ V AV I RRT R ++ + L + LTA Q R A A +G
Sbjct 95 GVLAVVLVLVALAVVIRLWLGPVRRTAR-DQAEETDL--SSPLTADQLRVLARDQAGQGA 151
Query 114 WAAAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLA---GELTQAATAFND 170
+A A+R RL+A+ R LEE G+L+P GRTA EL + + G L A F++
Sbjct 152 YAEAVRSRLRAIVRMLEERGVLDPRPGRTAGELVDAVRAAIDRDSDAIGALVAAVEVFSE 211
Query 171 VTYGERPGTQGAYQMIADLDDHL 193
+ YG P T+ AY+++ D+ L
Sbjct 212 IWYGGGPATEQAYEVLVRADEQL 234
>gi|323356979|ref|YP_004223375.1| hypothetical protein MTES_0531 [Microbacterium testaceum StLB037]
gi|323273350|dbj|BAJ73495.1| hypothetical protein MTES_0531 [Microbacterium testaceum StLB037]
Length=223
Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/202 (35%), Positives = 104/202 (52%), Gaps = 18/202 (8%)
Query 7 DREAAHQAAQRELDKPIY------PKDSLTKELTDWIDEQLYRILEKGSSIPGGWFTITV 60
D + A + A+REL P Y P D L + + D+ E L + S+ G W +
Sbjct 18 DADEAREWAERELSDPAYQAAEPTPIDRLARAVVDFFGE-----LPRNSAN-GEWGPPAL 71
Query 61 LLILLMIAVTAAVQIA----RRTMRTNRGGDYQLFDAGQLTAAQH-RSTAESYAAEGNWA 115
+++ L++AV + I R + + LFD +A+ R AE+ AA G W
Sbjct 72 IVLALILAVGIVIGILIWGRPRALARAQPPARALFDEDDGRSAEELRRDAEAAAARGEWD 131
Query 116 AAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGE 175
AAI R +A AR L E G+++P G T + A A LP L L AA+ F+DV Y
Sbjct 132 AAIVLRFRAFARGLTERGLVDPPPGATVHTFARAAAAALPALGAGLDNAASLFDDVRYLR 191
Query 176 RPGTQGAYQMIADLD-DHLRSR 196
RPGT+ +Y+++ADLD D +R+R
Sbjct 192 RPGTEKSYRVVADLDADAVRTR 213
>gi|111220757|ref|YP_711551.1| putative integral membrane protein [Frankia alni ACN14a]
gi|111148289|emb|CAJ59961.1| putative integral membrane protein [Frankia alni ACN14a]
Length=253
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/128 (36%), Positives = 63/128 (50%), Gaps = 30/128 (23%)
Query 96 LTAAQHRSTAESYAAEGNWAAAIRHRLQAVARELEETGMLNPAAGRTANELASDAGEVLP 155
LTAAQ R+ A+ YA G++A A+R RL+A+ R LEE G+L+P GRTA EL ++ + P
Sbjct 105 LTAAQLRAEADRYATGGDYARAVRSRLRAIVRMLEEKGVLDPRPGRTAGELVAEVARITP 164
Query 156 ---------------------HLAGE---------LTQAATAFNDVTYGERPGTQGAYQM 185
LAG L A F+++ YG RP T YQ+
Sbjct 165 AADRGPAGPAATVPGMPATDHDLAGASPAGDGRAALAAAVEVFSEIWYGGRPATAAGYQV 224
Query 186 IADLDDHL 193
+ D D L
Sbjct 225 LVDADSAL 232
>gi|227497998|ref|ZP_03928174.1| integral membrane protein [Actinomyces urogenitalis DSM 15434]
gi|226832588|gb|EEH64971.1| integral membrane protein [Actinomyces urogenitalis DSM 15434]
Length=221
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/173 (36%), Positives = 92/173 (54%), Gaps = 12/173 (6%)
Query 9 EAAHQAAQRELDKPIY-PKDSLTKELTDWIDEQLYRILEKGSSIPGG--WFTITVLLILL 65
E A QAA EL KP Y P+ SL +++ W L L+ IPG W ++ ++ + L
Sbjct 24 EEARQAAVEELSKPAYHPRPSLLEQIWQW----LISHLQLTQVIPGAPAWLSMLIVAVAL 79
Query 66 MIAVTAAVQIARRTM---RTNRGGDYQLFDAGQLTAAQHRSTAESYAAEGNWAAAIRHRL 122
+ + V + RR R+ R G LFD + +AA ++ A+ A G+WA A+ R
Sbjct 80 AVLLGLLVVLLRRVTLAGRSRRRG-ASLFDDDRDSAALTQA-ADQAARSGDWATAVVERF 137
Query 123 QAVARELEETGMLNPAAGRTANELASDAGEVLPHLAGELTQAATAFNDVTYGE 175
+A+ R L+E G+++ G TA+E A + L L GEL QAA F+ V YGE
Sbjct 138 RAIIRSLDERGLIDDYPGMTAHEAAEVSAAALGTLGGELRQAANLFDSVRYGE 190
Lambda K H
0.317 0.130 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 263865364408
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40