BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3697c

Length=145
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15610833|ref|NP_218214.1|  hypothetical protein Rv3697c [Mycob...   292    9e-78
gi|340628670|ref|YP_004747122.1|  hypothetical protein MCAN_37181...   291    2e-77
gi|31794868|ref|NP_857361.1|  hypothetical protein Mb3723c [Mycob...   290    7e-77
gi|306805540|ref|ZP_07442208.1|  toxin [Mycobacterium tuberculosi...   289    1e-76
gi|258593480|emb|CBE69819.1|  Conserved membrane protein [NC10 ba...   117    4e-25
gi|302542963|ref|ZP_07295305.1|  putative toxin-antitoxin system,...  88.6    3e-16
gi|229822546|ref|YP_002884072.1|  PIN domain-containing protein f...  83.6    8e-15
gi|116748338|ref|YP_845025.1|  PilT domain-containing protein [Sy...  82.8    1e-14
gi|294054235|ref|YP_003547893.1|  PIN domain-containing protein f...  82.0    3e-14
gi|258593410|emb|CBE69749.1|  conserved protein of unknown functi...  75.9    2e-12
gi|320105317|ref|YP_004180907.1|  PIN domain-containing protein f...  75.9    2e-12
gi|240170675|ref|ZP_04749334.1|  PIN domain protein family protei...  75.5    3e-12
gi|116624725|ref|YP_826881.1|  PilT domain-containing protein [Ca...  75.5    3e-12
gi|308270136|emb|CBX26748.1|  hypothetical protein N47_A07770 [un...  73.2    1e-11
gi|88810689|ref|ZP_01125946.1|  hypothetical protein NB231_16453 ...  72.0    3e-11
gi|300780204|ref|ZP_07090060.1|  PilT domain protein [Corynebacte...  70.5    7e-11
gi|145221522|ref|YP_001132200.1|  PilT domain-containing protein ...  69.7    1e-10
gi|258593476|emb|CBE69815.1|  conserved protein of unknown functi...  67.4    6e-10
gi|297623633|ref|YP_003705067.1|  PIN domain-containing protein [...  67.4    7e-10
gi|296130776|ref|YP_003638026.1|  PIN domain protein family prote...  67.0    8e-10
gi|333991903|ref|YP_004524517.1|  PIN domain-containing protein f...  67.0    9e-10
gi|88811999|ref|ZP_01127252.1|  hypothetical protein NB231_06401 ...  65.5    3e-09
gi|297623624|ref|YP_003705058.1|  PIN domain-containing protein [...  64.7    4e-09
gi|340627865|ref|YP_004746317.1|  hypothetical protein MCAN_28941...  63.2    1e-08
gi|121638754|ref|YP_978978.1|  hypothetical protein BCG_2894 [Myc...  62.8    2e-08
gi|15610009|ref|NP_217388.1|  hypothetical protein Rv2872 [Mycoba...  62.8    2e-08
gi|284122509|ref|ZP_06386855.1|  PIN domain family protein [Candi...  62.4    2e-08
gi|289758220|ref|ZP_06517598.1|  conserved hypothetical protein [...  62.4    2e-08
gi|333990439|ref|YP_004523053.1|  hypothetical protein JDM601_179...  60.8    6e-08
gi|15609240|ref|NP_216619.1|  hypothetical protein Rv2103c [Mycob...  60.8    6e-08
gi|307084750|ref|ZP_07493863.1|  toxin [Mycobacterium tuberculosi...  60.8    7e-08
gi|15841594|ref|NP_336631.1|  hypothetical protein MT2163 [Mycoba...  60.8    7e-08
gi|297567544|ref|YP_003686516.1|  PIN domain-containing protein f...  58.5    3e-07
gi|340627115|ref|YP_004745567.1|  hypothetical protein MCAN_21291...  58.5    3e-07
gi|322435687|ref|YP_004217899.1|  PIN domain protein family prote...  56.2    2e-06
gi|289750699|ref|ZP_06510077.1|  conserved hypothetical protein [...  55.5    2e-06
gi|160898241|ref|YP_001563823.1|  PilT domain-containing protein ...  54.3    6e-06
gi|15608382|ref|NP_215758.1|  hypothetical protein Rv1242 [Mycoba...  51.6    4e-05
gi|240168912|ref|ZP_04747571.1|  hypothetical protein MkanA1_0634...  50.4    9e-05
gi|340625767|ref|YP_004744219.1|  hypothetical protein MCAN_07521...  50.1    1e-04
gi|253797202|ref|YP_003030203.1|  toxin [Mycobacterium tuberculos...  49.7    2e-04
gi|306774366|ref|ZP_07412703.1|  toxin [Mycobacterium tuberculosi...  49.3    2e-04
gi|15607889|ref|NP_215263.1|  hypothetical protein Rv0749 [Mycoba...  48.9    2e-04
gi|121636671|ref|YP_976894.1|  hypothetical protein BCG_0799 [Myc...  48.9    2e-04
gi|289573902|ref|ZP_06454129.1|  toxin [Mycobacterium tuberculosi...  48.9    2e-04
gi|340625313|ref|YP_004743765.1|  hypothetical protein MCAN_02841...  48.1    4e-04
gi|15607418|ref|NP_214791.1|  hypothetical protein Rv0277c [Mycob...  48.1    5e-04
gi|33865109|ref|NP_896668.1|  hypothetical protein SYNW0573 [Syne...  47.4    7e-04
gi|308273612|emb|CBX30214.1|  unknown protein [uncultured Desulfo...  47.0    0.001
gi|147679127|ref|YP_001213342.1|  nucleic acid-binding protein [P...  46.6    0.001


>gi|15610833|ref|NP_218214.1| hypothetical protein Rv3697c [Mycobacterium tuberculosis H37Rv]
 gi|15843315|ref|NP_338352.1| hypothetical protein MT3799 [Mycobacterium tuberculosis CDC1551]
 gi|148663560|ref|YP_001285083.1| hypothetical protein MRA_3732 [Mycobacterium tuberculosis H37Ra]
 62 more sequence titles
 Length=145

 Score =  292 bits (748),  Expect = 9e-78, Method: Compositional matrix adjust.
 Identities = 144/145 (99%), Positives = 145/145 (100%), Gaps = 0/145 (0%)

Query  1    VSETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGA  60
            +SETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGA
Sbjct  1    MSETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGA  60

Query  61   PLAPEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHG  120
            PLAPEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHG
Sbjct  61   PLAPEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHG  120

Query  121  IATIWSHDRDFRKFEGIRIRDPFSG  145
            IATIWSHDRDFRKFEGIRIRDPFSG
Sbjct  121  IATIWSHDRDFRKFEGIRIRDPFSG  145


>gi|340628670|ref|YP_004747122.1| hypothetical protein MCAN_37181 [Mycobacterium canettii CIPT 
140010059]
 gi|340006860|emb|CCC46049.1| putative conserved membrane protein [Mycobacterium canettii CIPT 
140010059]
Length=145

 Score =  291 bits (745),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 143/145 (99%), Positives = 145/145 (100%), Gaps = 0/145 (0%)

Query  1    VSETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGA  60
            +SETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGA
Sbjct  1    MSETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGA  60

Query  61   PLAPEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHG  120
            PLAPEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHG
Sbjct  61   PLAPEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHG  120

Query  121  IATIWSHDRDFRKFEGIRIRDPFSG  145
            IATIWSHDRDFRKFEGIRIRDPF+G
Sbjct  121  IATIWSHDRDFRKFEGIRIRDPFAG  145


>gi|31794868|ref|NP_857361.1| hypothetical protein Mb3723c [Mycobacterium bovis AF2122/97]
 gi|121639611|ref|YP_979835.1| hypothetical protein BCG_3756c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224992107|ref|YP_002646796.1| hypothetical protein JTY_3757 [Mycobacterium bovis BCG str. Tokyo 
172]
 10 more sequence titles
 Length=145

 Score =  290 bits (741),  Expect = 7e-77, Method: Compositional matrix adjust.
 Identities = 143/145 (99%), Positives = 144/145 (99%), Gaps = 0/145 (0%)

Query  1    VSETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGA  60
            +SETFDVDVLVHATHRASPFHDKAKTLVERFLA PGLVYLLWPVALGYLRVVTHPTLLGA
Sbjct  1    MSETFDVDVLVHATHRASPFHDKAKTLVERFLARPGLVYLLWPVALGYLRVVTHPTLLGA  60

Query  61   PLAPEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHG  120
            PLAPEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHG
Sbjct  61   PLAPEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHG  120

Query  121  IATIWSHDRDFRKFEGIRIRDPFSG  145
            IATIWSHDRDFRKFEGIRIRDPFSG
Sbjct  121  IATIWSHDRDFRKFEGIRIRDPFSG  145


>gi|306805540|ref|ZP_07442208.1| toxin [Mycobacterium tuberculosis SUMu007]
 gi|306969936|ref|ZP_07482597.1| toxin [Mycobacterium tuberculosis SUMu009]
 gi|308347839|gb|EFP36690.1| toxin [Mycobacterium tuberculosis SUMu007]
 gi|308352492|gb|EFP41343.1| toxin [Mycobacterium tuberculosis SUMu009]
Length=145

 Score =  289 bits (739),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 143/145 (99%), Positives = 144/145 (99%), Gaps = 0/145 (0%)

Query  1    VSETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGA  60
            +SETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYL VVTHPTLLGA
Sbjct  1    MSETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLWVVTHPTLLGA  60

Query  61   PLAPEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHG  120
            PLAPEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHG
Sbjct  61   PLAPEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHG  120

Query  121  IATIWSHDRDFRKFEGIRIRDPFSG  145
            IATIWSHDRDFRKFEGIRIRDPFSG
Sbjct  121  IATIWSHDRDFRKFEGIRIRDPFSG  145


>gi|258593480|emb|CBE69819.1| Conserved membrane protein [NC10 bacterium 'Dutch sediment']
Length=144

 Score =  117 bits (294),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 57/143 (40%), Positives = 84/143 (59%), Gaps = 0/143 (0%)

Query  1    VSETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGA  60
            +S + DV+VL++A+  +SP H +A   +E     P L  + W   + YLR+ T+P +   
Sbjct  1    MSYSVDVNVLLYASDTSSPKHPEAIRFMEERAFDPDLFCIAWSTLIAYLRIATYPRIFAR  60

Query  61   PLAPEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHG  120
            PL+P  A+ N+E   S P VR + E   F   YR V      RGNLVPDAHL  L++ HG
Sbjct  61   PLSPSDALGNVESLLSLPRVRTLSEGEDFLDGYRGVTAHFPVRGNLVPDAHLATLLQQHG  120

Query  121  IATIWSHDRDFRKFEGIRIRDPF  143
            +  +++ DRDFRKF+ + + DPF
Sbjct  121  VGRLYTADRDFRKFDFLEVVDPF  143


>gi|302542963|ref|ZP_07295305.1| putative toxin-antitoxin system, toxin component, PIN family 
[Streptomyces hygroscopicus ATCC 53653]
 gi|302460581|gb|EFL23674.1| putative toxin-antitoxin system, toxin component, PIN family 
[Streptomyces himastatinicus ATCC 53653]
Length=144

 Score = 88.6 bits (218),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 44/140 (32%), Positives = 69/140 (50%), Gaps = 0/140 (0%)

Query  6    DVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAPE  65
            D ++LV+A    SPFH  A   ++          L WP    +  + THP +   P   E
Sbjct  5    DTNILVYAHRSDSPFHSAAAAQIKGLAEARAPWALPWPCLHEFFSIATHPRIYQPPSTAE  64

Query  66   VAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATIW  125
             A+  I+ + S P V  + EA+ +WP  R++ +  K  G +V D  + AL  + G+  +W
Sbjct  65   QAIAQIDAWLSSPSVVLLSEADTYWPTLRQMLEDGKVAGPMVHDGRIAALCANSGVRELW  124

Query  126  SHDRDFRKFEGIRIRDPFSG  145
            S DRDF +F  +  R+P  G
Sbjct  125  SADRDFSRFPALTTRNPLHG  144


>gi|229822546|ref|YP_002884072.1| PIN domain-containing protein family protein [Beutenbergia cavernae 
DSM 12333]
 gi|229568459|gb|ACQ82310.1| PIN domain protein family protein [Beutenbergia cavernae DSM 
12333]
Length=143

 Score = 83.6 bits (205),  Expect = 8e-15, Method: Compositional matrix adjust.
 Identities = 50/137 (37%), Positives = 68/137 (50%), Gaps = 1/137 (0%)

Query  6    DVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAPE  65
            D +VL++A    SPFH  AK  +E  L+GP  V L WP  L + R+ +HP     PL P 
Sbjct  4    DANVLLYAVDTGSPFHRAAKEWLEEALSGPARVGLPWPSLLAFQRIASHPRAAAQPLTPG  63

Query  66   VAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATIW  125
             A   I ++            +G   +  R+      RGNLV DAHL AL   HG+  I 
Sbjct  64   AAWAFITEWLRADPAWIPTPGDGHAAILGRLLTAGDLRGNLVTDAHLAALALEHGVG-IC  122

Query  126  SHDRDFRKFEGIRIRDP  142
            S D DF +F+G+   +P
Sbjct  123  SFDSDFARFDGLTWHNP  139


>gi|116748338|ref|YP_845025.1| PilT domain-containing protein [Syntrophobacter fumaroxidans 
MPOB]
 gi|116697402|gb|ABK16590.1| PIN domain family protein [Syntrophobacter fumaroxidans MPOB]
Length=144

 Score = 82.8 bits (203),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 45/139 (33%), Positives = 78/139 (57%), Gaps = 1/139 (0%)

Query  6    DVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAPE  65
            DV++L++A ++  P H +++T +E  L+G   V L W V   +LR+ T+  +   PL+ E
Sbjct  5    DVNLLLYAVNQDLPQHARSRTWLETVLSGSESVGLPWVVIRAFLRITTNARIFERPLSVE  64

Query  66   VAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATIW  125
             AV  +E++ ++P    V      W + R +       GNL  DAH+ AL   +G  T++
Sbjct  65   RAVAYVEEWLAQPVATTVTPGKSHWMILRNLLLDSGTGGNLTTDAHIAALAIEYG-HTVY  123

Query  126  SHDRDFRKFEGIRIRDPFS  144
            S D DF++F+G+R  +P +
Sbjct  124  STDNDFKRFQGLRHINPLA  142


>gi|294054235|ref|YP_003547893.1| PIN domain-containing protein family protein [Coraliomargarita 
akajimensis DSM 45221]
 gi|293613568|gb|ADE53723.1| PIN domain protein family protein [Coraliomargarita akajimensis 
DSM 45221]
Length=142

 Score = 82.0 bits (201),  Expect = 3e-14, Method: Compositional matrix adjust.
 Identities = 49/138 (36%), Positives = 72/138 (53%), Gaps = 1/138 (0%)

Query  6    DVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAPE  65
            D ++L++A   +S  H  AK   E  L+G   + + W V L + R++THP +  APL   
Sbjct  5    DANLLIYAHDHSSRDHATAKDWWETALSGSESIGIPWIVVLAFTRILTHPQICEAPLGVT  64

Query  66   VAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATIW  125
               E +EQ+   P VR +  +N   PV+  + +     GNL  DA + A  R H  A I+
Sbjct  65   QVRELVEQWFDSPQVRLIQTSNRALPVFFDLLEDAGMGGNLSTDALIAAHAREHS-AVIY  123

Query  126  SHDRDFRKFEGIRIRDPF  143
            S DRDF +F GIR  +P 
Sbjct  124  SCDRDFDRFMGIRWVNPL  141


>gi|258593410|emb|CBE69749.1| conserved protein of unknown function [NC10 bacterium 'Dutch 
sediment']
Length=144

 Score = 75.9 bits (185),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 39/138 (29%), Positives = 67/138 (49%), Gaps = 0/138 (0%)

Query  6    DVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAPE  65
            D ++LV+A    SP+H  A   +           + WP    +L +VTHPT+        
Sbjct  5    DTNLLVYAHREDSPWHTAAYARIAELAESRAPWAIPWPCLHEFLAIVTHPTIYAPATPLA  64

Query  66   VAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATIW  125
            +A++ ++ +   P +  + E +G+W   R      +  G  V DAH+ AL R HG+  +W
Sbjct  65   IALDQVDAWLESPSLTLLTEMSGYWIQLRHAIQKGQIAGPQVHDAHIAALCRLHGVRELW  124

Query  126  SHDRDFRKFEGIRIRDPF  143
            + DR F +F  + +R+P 
Sbjct  125  TADRHFGRFPDLPVRNPL  142


>gi|320105317|ref|YP_004180907.1| PIN domain-containing protein family protein [Terriglobus saanensis 
SP1PR4]
 gi|319923838|gb|ADV80913.1| PIN domain protein family protein [Terriglobus saanensis SP1PR4]
Length=145

 Score = 75.9 bits (185),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 43/140 (31%), Positives = 72/140 (52%), Gaps = 1/140 (0%)

Query  5    FDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAP  64
             D ++L++A   A+P H ++   +ER  +    V +     + +LR++TH  L G   + 
Sbjct  4    LDANLLIYAYDEAAPHHKRSSKWIERIFSSREPVLIPVAAIMAFLRIMTHQALPGPRFSM  63

Query  65   EVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATI  124
            E  +  ++++ S  HV      N  W   R+     + R +LV D+HL AL   +G AT+
Sbjct  64   EEGIGIVDEWFSLSHVSIAITGNEHWNYLRQTLTDGQARSSLVTDSHLAALAIENG-ATL  122

Query  125  WSHDRDFRKFEGIRIRDPFS  144
             S DRDF +F G+R  DP +
Sbjct  123  CSVDRDFARFPGLRWVDPLT  142


>gi|240170675|ref|ZP_04749334.1| PIN domain protein family protein [Mycobacterium kansasii ATCC 
12478]
Length=142

 Score = 75.5 bits (184),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 47/140 (34%), Positives = 72/140 (52%), Gaps = 1/140 (0%)

Query  6    DVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAPE  65
            D ++L++A   +S  +  A + +E  LAG   V L W     +LR+ THP +   PL+  
Sbjct  4    DANLLLYAVDESSAHNVAAASWLEEVLAGDSRVGLPWQTIGAFLRIATHPRVAENPLSGP  63

Query  66   VAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATIW  125
             A   + ++ + P V           VY R+++ V+  GNLVPDA L AL   HG+  + 
Sbjct  64   AAWRYVAEWLAVPVVWIPPATETTARVYARLSEQVEITGNLVPDAQLAALAVEHGV-ELA  122

Query  126  SHDRDFRKFEGIRIRDPFSG  145
            S D DF +F G+R  +P S 
Sbjct  123  SADTDFMRFPGLRWMNPLSA  142


>gi|116624725|ref|YP_826881.1| PilT domain-containing protein [Candidatus Solibacter usitatus 
Ellin6076]
 gi|116227887|gb|ABJ86596.1| PIN domain family protein [Candidatus Solibacter usitatus Ellin6076]
Length=142

 Score = 75.5 bits (184),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 42/141 (30%), Positives = 70/141 (50%), Gaps = 1/141 (0%)

Query  3    ETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPL  62
            +  D ++L++A ++ +P H  A+  +E+ L+G   +   W V L +LR+ T P L   PL
Sbjct  2    KLLDANILLYAVNKDAPLHQSARQWLEKTLSGDEPLGFSWNVILAFLRLTTRPGLFRKPL  61

Query  63   APEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIA  122
            +P+ A + +  + + P    V        +  R+  P+   GNL  DAHL AL      A
Sbjct  62   SPDQAFDLVASWLAEPAAIIVHAGPRHLEIVHRLIKPLGTAGNLTSDAHLGALAIEQN-A  120

Query  123  TIWSHDRDFRKFEGIRIRDPF  143
             + S D DF +F G+   +P 
Sbjct  121  QLCSCDSDFARFSGVDWLNPL  141


>gi|308270136|emb|CBX26748.1| hypothetical protein N47_A07770 [uncultured Desulfobacterium 
sp.]
Length=143

 Score = 73.2 bits (178),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 41/139 (30%), Positives = 69/139 (50%), Gaps = 1/139 (0%)

Query  6    DVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAPE  65
            D ++L++A    SP H +A+   +  L+    V L WPV   ++R+ T+P +   PL  E
Sbjct  5    DANILLYAEDSLSPLHQQARLWWDDQLSKSEPVCLCWPVLSAFIRIGTNPRVFEHPLPLE  64

Query  66   VAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATIW  125
             A+  ++ +  +P  R +      W V+  +    +   NLV DAHL AL   +G   + 
Sbjct  65   QALTRVQSWLDQPCTRVIQPTEQHWAVFMMMLKGGQAVANLVTDAHLAALAIENG-CDLA  123

Query  126  SHDRDFRKFEGIRIRDPFS  144
            S D DF +F  ++  +P S
Sbjct  124  STDSDFSRFPKLKWINPLS  142


>gi|88810689|ref|ZP_01125946.1| hypothetical protein NB231_16453 [Nitrococcus mobilis Nb-231]
 gi|88792319|gb|EAR23429.1| hypothetical protein NB231_16453 [Nitrococcus mobilis Nb-231]
Length=144

 Score = 72.0 bits (175),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 45/140 (33%), Positives = 70/140 (50%), Gaps = 1/140 (0%)

Query  6    DVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAPE  65
            DV++L++A +  +P H  AK   E  L+    V L W  ALG++R++TH  +L  P+ P 
Sbjct  5    DVNLLIYAYNTDAPHHSDAKAWWEGLLSSEEPVGLPWASALGFIRLMTHRAVLVMPVEPS  64

Query  66   VAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATIW  125
             AVE +  + SR +V  +        +   +   +   G L  D HL AL   H    + 
Sbjct  65   RAVEYVRSWHSRSNVSALEPGPRHLELLDGLFAALGTAGKLTTDTHLAALAIEHQ-CVLC  123

Query  126  SHDRDFRKFEGIRIRDPFSG  145
            S+D DF +F G+R R+P   
Sbjct  124  SNDGDFARFPGLRWRNPLKA  143


>gi|300780204|ref|ZP_07090060.1| PilT domain protein [Corynebacterium genitalium ATCC 33030]
 gi|300534314|gb|EFK55373.1| PilT domain protein [Corynebacterium genitalium ATCC 33030]
Length=145

 Score = 70.5 bits (171),  Expect = 7e-11, Method: Compositional matrix adjust.
 Identities = 46/142 (33%), Positives = 68/142 (48%), Gaps = 5/142 (3%)

Query  6    DVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAPE  65
            D +VL++A+   +    +A + ++  L G   V   W   L + R+ T+P L   PL P 
Sbjct  4    DANVLIYASDENATHFAEASSWLDGALRGTERVGFPWICLLAFQRITTNPALFAMPLTPS  63

Query  66   VAVENIEQFTSRPH--VRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIAT  123
             A + IE +   P+  V Q G  +    + R +      RG LV DAHL AL   HG  +
Sbjct  64   RASDYIENWLKHPNSWVPQPGPQHA--SILRTLTVDSDARGTLVTDAHLAALAIEHG-TS  120

Query  124  IWSHDRDFRKFEGIRIRDPFSG  145
            I S D DF +F+G+R   P   
Sbjct  121  ICSFDSDFARFQGLRWFSPLDA  142


>gi|145221522|ref|YP_001132200.1| PilT domain-containing protein [Mycobacterium gilvum PYR-GCK]
 gi|145214008|gb|ABP43412.1| PIN domain family protein [Mycobacterium gilvum PYR-GCK]
Length=145

 Score = 69.7 bits (169),  Expect = 1e-10, Method: Compositional matrix adjust.
 Identities = 47/139 (34%), Positives = 70/139 (51%), Gaps = 1/139 (0%)

Query  6    DVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAPE  65
            D +VL++A + +S  HD ++  ++  L+G  +V L W   L ++R+ T   L  +PL P+
Sbjct  5    DANVLLYAVNSSSEHHDASRRWLDGALSGNDVVGLAWVPMLAFVRLTTKHGLFPSPLTPD  64

Query  66   VAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATIW  125
             A+  I  + S P    V        V   +   V   GNLV DAHL AL   H  A I 
Sbjct  65   DAMARITDWCSAPGAVIVNPTARHADVLATLLSDVGTGGNLVNDAHLAALALEHR-ARIV  123

Query  126  SHDRDFRKFEGIRIRDPFS  144
            S+D DF +F G++   P S
Sbjct  124  SYDNDFGRFSGVQWDVPES  142


>gi|258593476|emb|CBE69815.1| conserved protein of unknown function [NC10 bacterium 'Dutch 
sediment']
Length=144

 Score = 67.4 bits (163),  Expect = 6e-10, Method: Compositional matrix adjust.
 Identities = 46/149 (31%), Positives = 64/149 (43%), Gaps = 19/149 (12%)

Query  6    DVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAPE  65
            D +VL++A    SPFH +    ++ +       YL W +   +LRV THP +   P    
Sbjct  5    DTNVLIYAADADSPFHRRCHARLQDWRGQTSAWYLTWGILYEFLRVTTHPRVFRQPWPAA  64

Query  66   VAVENIEQFTSRP----------HVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVAL  115
             A E IE   + P          H   V E  G  P            GN++ DAH   L
Sbjct  65   RAWEFIEAVLASPGLSLLLPTDRHATVVAEVFGELP---------HLAGNVIHDAHTAIL  115

Query  116  MRHHGIATIWSHDRDFRKFEGIRIRDPFS  144
            MR HGI  I++ D DF +F  +   DP +
Sbjct  116  MREHGIRRIYTRDTDFHRFPFLEPIDPMA  144


>gi|297623633|ref|YP_003705067.1| PIN domain-containing protein [Truepera radiovictrix DSM 17093]
 gi|297164813|gb|ADI14524.1| PIN domain protein family protein [Truepera radiovictrix DSM 
17093]
Length=145

 Score = 67.4 bits (163),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 44/140 (32%), Positives = 67/140 (48%), Gaps = 1/140 (0%)

Query  5    FDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAP  64
             D ++L++A    SP H  A   ++  L+    V L WP  L +LR+ T+P +   PL  
Sbjct  4    IDANLLIYAHVMGSPQHHAAHAWLDAQLSAGYRVGLPWPSLLAFLRLTTNPRVFERPLTA  63

Query  65   EVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATI  124
              A   +E + S P V           + R +        NL+PDAHL AL   HG+ T+
Sbjct  64   AEAWAQVEAWLSVPSVWLPTPTAEHPKLLRDLVTQTGATANLIPDAHLAALALEHGL-TL  122

Query  125  WSHDRDFRKFEGIRIRDPFS  144
             S D DF +F  ++ R+P +
Sbjct  123  CSTDGDFGRFPRLKWRNPLA  142


>gi|296130776|ref|YP_003638026.1| PIN domain protein family protein [Cellulomonas flavigena DSM 
20109]
 gi|296022591|gb|ADG75827.1| PIN domain protein family protein [Cellulomonas flavigena DSM 
20109]
Length=143

 Score = 67.0 bits (162),  Expect = 8e-10, Method: Compositional matrix adjust.
 Identities = 45/133 (34%), Positives = 64/133 (49%), Gaps = 1/133 (0%)

Query  6    DVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAPE  65
            DV+VLV A    SP HD  +  +E  +  P  + L   V  G +RV+THP +   P    
Sbjct  5    DVNVLVGALRADSPRHDALRRWLEAAVDAPEPLGLTDAVLGGTVRVLTHPRVFARPTPLR  64

Query  66   VAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATIW  125
             A++ +    + P   +V   +  W +   +      RGNLV DA   A+   HG AT  
Sbjct  65   TALDLVGDLRAHPGTVRVAPGDRHWEIVADLCRAADARGNLVADAQHAAVAVEHG-ATWV  123

Query  126  SHDRDFRKFEGIR  138
            S DRDF +F G+R
Sbjct  124  SQDRDFARFPGLR  136


>gi|333991903|ref|YP_004524517.1| PIN domain-containing protein family protein [Mycobacterium sp. 
JDM601]
 gi|333487871|gb|AEF37263.1| PIN domain protein family protein [Mycobacterium sp. JDM601]
Length=143

 Score = 67.0 bits (162),  Expect = 9e-10, Method: Compositional matrix adjust.
 Identities = 43/141 (31%), Positives = 65/141 (47%), Gaps = 1/141 (0%)

Query  5    FDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAP  64
             D ++L++A    S  +  A   +E  L G   + L W     +LR++THP +   PL P
Sbjct  3    LDANLLLYAVDADSKHNPVAAAWLEETLNGDNRIGLPWQTIGAFLRIITHPRVTENPLPP  62

Query  65   EVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATI  124
              A   +  + + P V           VY  +       GNLVPDA L AL   HG+  +
Sbjct  63   SEAWSYVADWLAVPVVWIPPATEATARVYAGICAQADVAGNLVPDAQLAALAIEHGV-EL  121

Query  125  WSHDRDFRKFEGIRIRDPFSG  145
             S D DF++F G+R  +P + 
Sbjct  122  ASADSDFQRFPGLRWFNPLTS  142


>gi|88811999|ref|ZP_01127252.1| hypothetical protein NB231_06401 [Nitrococcus mobilis Nb-231]
 gi|88790883|gb|EAR21997.1| hypothetical protein NB231_06401 [Nitrococcus mobilis Nb-231]
Length=145

 Score = 65.5 bits (158),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 44/139 (32%), Positives = 68/139 (49%), Gaps = 1/139 (0%)

Query  5    FDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAP  64
             DV+VLV+A    +  H   +  +E  + G G   +   V  G++RVVTHP +   P   
Sbjct  4    MDVNVLVYAHREDTADHLAYRDWLEEQINGLGAYGVSDLVLSGFIRVVTHPRVFERPTPL  63

Query  65   EVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATI  124
            + A+  + Q  S+P    +      W ++ ++    K  GNLVPDA+  AL    G   I
Sbjct  64   DRALAFVHQVRSQPQAVPIRPGPRHWAIFEKLVRLSKAEGNLVPDAYHAALAIEAGCDWI  123

Query  125  WSHDRDFRKFEGIRIRDPF  143
             + D+ F +F G+R R PF
Sbjct  124  -TTDKGFLRFPGLRARHPF  141


>gi|297623624|ref|YP_003705058.1| PIN domain-containing protein [Truepera radiovictrix DSM 17093]
 gi|297164804|gb|ADI14515.1| PIN domain protein family protein [Truepera radiovictrix DSM 
17093]
Length=144

 Score = 64.7 bits (156),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 40/141 (29%), Positives = 69/141 (49%), Gaps = 1/141 (0%)

Query  5    FDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAP  64
             D++ LV+A    +P H      +E+ +       L   V  G++RVVTHP +   P   
Sbjct  4    LDINPLVYAFRPDAPQHPAYVGWLEKLVNQDAAFGLADIVCSGFIRVVTHPRVFSPPSPL  63

Query  65   EVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATI  124
            + A+E +E   ++P+   +      W ++ ++   V  +GN+VPDA+L AL    G + +
Sbjct  64   DDALEYLEDIRAQPNCVILAPGERHWRIFLQLCHAVGAKGNVVPDAYLAALAIESG-SEL  122

Query  125  WSHDRDFRKFEGIRIRDPFSG  145
             + DR   +F G+R R P   
Sbjct  123  ATADRGVARFPGLRWRHPLDA  143


>gi|340627865|ref|YP_004746317.1| hypothetical protein MCAN_28941 [Mycobacterium canettii CIPT 
140010059]
 gi|157382523|gb|ABV48756.1| Rv2872 [Mycobacterium canettii]
 gi|340006055|emb|CCC45225.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=147

 Score = 63.2 bits (152),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 46/143 (33%), Positives = 70/143 (49%), Gaps = 3/143 (2%)

Query  4    TFDVDVLVHATHRAS-PFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPL  62
              DV+VLV+A HRA    H   + L+ER       + L   V  G++RVVT+  +   P 
Sbjct  3    CVDVNVLVYA-HRADLREHTDYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEPT  61

Query  63   APEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIA  122
            +P+ A + ++   + P   ++      W  +R++A  V   GN + DAHL A    +  A
Sbjct  62   SPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENN-A  120

Query  123  TIWSHDRDFRKFEGIRIRDPFSG  145
            T  S DR F +F  +R R P  G
Sbjct  121  TWLSADRGFARFRRLRWRHPLDG  143


>gi|121638754|ref|YP_978978.1| hypothetical protein BCG_2894 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224991246|ref|YP_002645935.1| hypothetical protein JTY_2889 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|121494402|emb|CAL72883.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224774361|dbj|BAH27167.1| hypothetical protein JTY_2889 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341602792|emb|CCC65470.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=147

 Score = 62.8 bits (151),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 46/143 (33%), Positives = 70/143 (49%), Gaps = 3/143 (2%)

Query  4    TFDVDVLVHATHRAS-PFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPL  62
              DV+VLV+A HRA    H   + L+ER       + L   V  G++RVVT+  +   P 
Sbjct  3    CVDVNVLVYA-HRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEPT  61

Query  63   APEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIA  122
            +P+ A + ++   + P   ++      W  +R++A  V   GN + DAHL A    +  A
Sbjct  62   SPQDAWQAVDTLLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENN-A  120

Query  123  TIWSHDRDFRKFEGIRIRDPFSG  145
            T  S DR F +F  +R R P  G
Sbjct  121  TWLSADRGFARFRRLRWRHPLDG  143


>gi|15610009|ref|NP_217388.1| hypothetical protein Rv2872 [Mycobacterium tuberculosis H37Rv]
 gi|15842413|ref|NP_337450.1| hypothetical protein MT2939 [Mycobacterium tuberculosis CDC1551]
 gi|31794049|ref|NP_856542.1| hypothetical protein Mb2897 [Mycobacterium bovis AF2122/97]
 75 more sequence titles
 Length=147

 Score = 62.8 bits (151),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 46/143 (33%), Positives = 70/143 (49%), Gaps = 3/143 (2%)

Query  4    TFDVDVLVHATHRAS-PFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPL  62
              DV+VLV+A HRA    H   + L+ER       + L   V  G++RVVT+  +   P 
Sbjct  3    CVDVNVLVYA-HRADLREHADYRGLLERLANDDEPLGLPDSVLAGFIRVVTNRRVFTEPT  61

Query  63   APEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIA  122
            +P+ A + ++   + P   ++      W  +R++A  V   GN + DAHL A    +  A
Sbjct  62   SPQDAWQAVDALLAAPAAMRLRPGERHWMAFRQLASDVDANGNDIADAHLAAYALENN-A  120

Query  123  TIWSHDRDFRKFEGIRIRDPFSG  145
            T  S DR F +F  +R R P  G
Sbjct  121  TWLSADRGFARFRRLRWRHPLDG  143


>gi|284122509|ref|ZP_06386855.1| PIN domain family protein [Candidatus Poribacteria sp. WGA-A3]
 gi|283829353|gb|EFC33749.1| PIN domain family protein [Candidatus Poribacteria sp. WGA-A3]
Length=143

 Score = 62.4 bits (150),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 42/137 (31%), Positives = 67/137 (49%), Gaps = 2/137 (1%)

Query  5    FDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALG-YLRVVTHPTLLGAPLA  63
             D +VL+HA  +    H +A  L+ R LA     + L    LG +LRVVTH  +   P  
Sbjct  4    LDTNVLIHAHRKEMAKHAEAGQLL-RNLAEGTKPWGLPVFCLGEFLRVVTHHRVFTPPTT  62

Query  64   PEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIAT  123
             + A+  ++     P VR +   + +W  +       +  GN+V DA +VA+   HGI  
Sbjct  63   IQNALAALDGLLQSPTVRLLLPGDRYWSCFHNAISQGQATGNVVFDAQIVAVCLEHGIDF  122

Query  124  IWSHDRDFRKFEGIRIR  140
            + S DR+ ++FE   I+
Sbjct  123  LISEDRELKRFENNNIQ  139


>gi|289758220|ref|ZP_06517598.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294997046|ref|ZP_06802737.1| hypothetical protein Mtub2_21708 [Mycobacterium tuberculosis 
210]
 gi|289713784|gb|EFD77796.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|326903715|gb|EGE50648.1| toxin [Mycobacterium tuberculosis W-148]
 gi|339295024|gb|AEJ47135.1| hypothetical protein CCDC5079_1945 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339298648|gb|AEJ50758.1| hypothetical protein CCDC5180_1921 [Mycobacterium tuberculosis 
CCDC5180]
Length=144

 Score = 62.4 bits (150),  Expect = 2e-08, Method: Compositional matrix adjust.
 Identities = 44/140 (32%), Positives = 66/140 (48%), Gaps = 1/140 (0%)

Query  3    ETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPL  62
            +  D +VL++A + AS  H  +   ++  L+G   V   W   L ++R+ T   L   PL
Sbjct  2    KIVDANVLLYAVNTASEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRPL  61

Query  63   APEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIA  122
              E A+  +  + + P    V        +  R+   V    NLV DAHL AL   H  A
Sbjct  62   PREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHR-A  120

Query  123  TIWSHDRDFRKFEGIRIRDP  142
            +I S+D DF +FEG+R   P
Sbjct  121  SIVSYDSDFGRFEGVRWDQP  140


>gi|333990439|ref|YP_004523053.1| hypothetical protein JDM601_1799 [Mycobacterium sp. JDM601]
 gi|333486407|gb|AEF35799.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=143

 Score = 60.8 bits (146),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 47/141 (34%), Positives = 70/141 (50%), Gaps = 4/141 (2%)

Query  3    ETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPL  62
            +  D +VL++A + A+  HD +   ++R L+G   V   W   L ++R+ T   L   PL
Sbjct  2    KIVDANVLLYAVNTAAEHHDASLRWLDRALSGADTVGFAWVPLLAFVRLSTKEGLFPHPL  61

Query  63   APEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVAL-MRHHGI  121
             PE AV+ + ++T+      V        +   +   V   GNLV DAHL AL + H G 
Sbjct  62   RPEDAVDRVAEWTAASSAVVVNPTPRHADILTGLLARVGAGGNLVNDAHLAALAIEHRG-  120

Query  122  ATIWSHDRDFRKFEGIRIRDP  142
              I S+D DF +F GIR   P
Sbjct  121  -GIVSYDADFGRF-GIRWDRP  139


>gi|15609240|ref|NP_216619.1| hypothetical protein Rv2103c [Mycobacterium tuberculosis H37Rv]
 gi|31793285|ref|NP_855778.1| hypothetical protein Mb2129c [Mycobacterium bovis AF2122/97]
 gi|121637987|ref|YP_978211.1| hypothetical protein BCG_2122c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 67 more sequence titles
 Length=144

 Score = 60.8 bits (146),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 43/140 (31%), Positives = 65/140 (47%), Gaps = 1/140 (0%)

Query  3    ETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPL  62
            +  D +VL++A +  S  H  +   ++  L+G   V   W   L ++R+ T   L   PL
Sbjct  2    KIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRPL  61

Query  63   APEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIA  122
              E A+  +  + + P    V        +  R+   V    NLV DAHL AL   H  A
Sbjct  62   PREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHR-A  120

Query  123  TIWSHDRDFRKFEGIRIRDP  142
            +I S+D DF +FEG+R   P
Sbjct  121  SIVSYDSDFGRFEGVRWDQP  140


>gi|307084750|ref|ZP_07493863.1| toxin [Mycobacterium tuberculosis SUMu012]
 gi|308365680|gb|EFP54531.1| toxin [Mycobacterium tuberculosis SUMu012]
Length=143

 Score = 60.8 bits (146),  Expect = 7e-08, Method: Compositional matrix adjust.
 Identities = 43/140 (31%), Positives = 65/140 (47%), Gaps = 1/140 (0%)

Query  3    ETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPL  62
            +  D +VL++A +  S  H  +   ++  L+G   V   W   L ++R+ T   L   PL
Sbjct  2    KIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRPL  61

Query  63   APEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIA  122
              E A+  +  + + P    V        +  R+   V    NLV DAHL AL   H  A
Sbjct  62   PREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHR-A  120

Query  123  TIWSHDRDFRKFEGIRIRDP  142
            +I S+D DF +FEG+R   P
Sbjct  121  SIVSYDSDFGRFEGVRWDQP  140


>gi|15841594|ref|NP_336631.1| hypothetical protein MT2163 [Mycobacterium tuberculosis CDC1551]
 gi|13881843|gb|AAK46445.1| hypothetical protein MT2163 [Mycobacterium tuberculosis CDC1551]
Length=145

 Score = 60.8 bits (146),  Expect = 7e-08, Method: Compositional matrix adjust.
 Identities = 43/140 (31%), Positives = 65/140 (47%), Gaps = 1/140 (0%)

Query  3    ETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPL  62
            +  D +VL++A +  S  H  +   ++  L+G   V   W   L ++R+ T   L   PL
Sbjct  3    KIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRPL  62

Query  63   APEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIA  122
              E A+  +  + + P    V        +  R+   V    NLV DAHL AL   H  A
Sbjct  63   PREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHR-A  121

Query  123  TIWSHDRDFRKFEGIRIRDP  142
            +I S+D DF +FEG+R   P
Sbjct  122  SIVSYDSDFGRFEGVRWDQP  141


>gi|297567544|ref|YP_003686516.1| PIN domain-containing protein family protein [Meiothermus silvanus 
DSM 9946]
 gi|296851993|gb|ADH65008.1| PIN domain protein family protein [Meiothermus silvanus DSM 9946]
Length=143

 Score = 58.5 bits (140),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 48/141 (35%), Positives = 68/141 (49%), Gaps = 5/141 (3%)

Query  5    FDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTL--LGAPL  62
             DV+VL++A  R SP H      +   LA    V +   V L  LR+ T P+L  L APL
Sbjct  4    LDVNVLIYAFRRDSPQHPACYAWLSGSLATGESVGVPSWVELAVLRINTLPSLGDLAAPL  63

Query  63   APEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIA  122
               +A   + +  S P  + V       P++  +   +  RGN + DA + AL   HG A
Sbjct  64   KDVLAF--LYELRSHPSYQLVEPGPKHLPIFEDLCQRLGLRGNDLNDAFIAALAIEHG-A  120

Query  123  TIWSHDRDFRKFEGIRIRDPF  143
            T+ S DR F +F G+R  DP 
Sbjct  121  TLVSTDRGFARFPGVRRIDPL  141


>gi|340627115|ref|YP_004745567.1| hypothetical protein MCAN_21291 [Mycobacterium canettii CIPT 
140010059]
 gi|340005305|emb|CCC44461.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=144

 Score = 58.5 bits (140),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 64/140 (46%), Gaps = 1/140 (0%)

Query  3    ETFDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPL  62
            +  D +VL++A +  S  H  +   ++  L+G   V   W   L ++R+ T   L   PL
Sbjct  2    KIVDANVLLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLSFVRLATKVGLFPRPL  61

Query  63   APEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIA  122
              E A+  +  + + P    V        +  R+   V    NLV DAHL AL   H  A
Sbjct  62   PREAAITQVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHR-A  120

Query  123  TIWSHDRDFRKFEGIRIRDP  142
            +I S+D DF +F G+R   P
Sbjct  121  SIVSYDSDFGRFAGVRWDQP  140


>gi|322435687|ref|YP_004217899.1| PIN domain protein family protein [Acidobacterium sp. MP5ACTX9]
 gi|321163414|gb|ADW69119.1| PIN domain protein family protein [Acidobacterium sp. MP5ACTX9]
Length=143

 Score = 56.2 bits (134),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 39/141 (28%), Positives = 73/141 (52%), Gaps = 2/141 (1%)

Query  5    FDVDVLVHATHRASPFHDKAKTLVERFLAGPG-LVYLLWPVALGYLRVVTHPTLLGAPLA  63
             D ++L++A    S FH  A++ ++   +     + +    A  +LR++T+P + GA +A
Sbjct  4    LDANLLLYAYTARSSFHQPARSYLDHIFSDTSESIGIPIQCATAFLRLITNPAVTGARIA  63

Query  64   PEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIAT  123
             + A+  +E++ + PHVR +      W   + V       G+L+ DA + A    +G A 
Sbjct  64   MDDAIARVEEWQALPHVRILYPGEEHWQFLKTVTRNGHATGDLIADAAIAAFALEYG-AV  122

Query  124  IWSHDRDFRKFEGIRIRDPFS  144
            + S+DRDF +F  IR  +P +
Sbjct  123  VHSNDRDFARFSSIRWHNPLA  143


>gi|289750699|ref|ZP_06510077.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289691286|gb|EFD58715.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=136

 Score = 55.5 bits (132),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 40/133 (31%), Positives = 61/133 (46%), Gaps = 1/133 (0%)

Query  10   LVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAPEVAVE  69
            +++A +  S  H  +   ++  L+G   V   W   L ++R+ T   L   PL  E A+ 
Sbjct  1    MLYAVNTTSEHHKPSLRWLDGALSGADRVGFAWVPLLAFVRLATKVGLFPRPLPREAAIT  60

Query  70   NIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATIWSHDR  129
             +  + + P    V        +  R+   V    NLV DAHL AL   H  A+I S+D 
Sbjct  61   QVADWLAAPSAVLVNPTVRHADILARMLTYVGTGANLVNDAHLAALAVEHR-ASIVSYDS  119

Query  130  DFRKFEGIRIRDP  142
            DF +FEG+R   P
Sbjct  120  DFGRFEGVRWDQP  132


>gi|160898241|ref|YP_001563823.1| PilT domain-containing protein [Delftia acidovorans SPH-1]
 gi|160363825|gb|ABX35438.1| PIN domain protein family protein [Delftia acidovorans SPH-1]
Length=145

 Score = 54.3 bits (129),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 43/134 (33%), Positives = 63/134 (48%), Gaps = 5/134 (3%)

Query  4    TFDVDVLVHATHRASPFHDKAKTLVERFLA--GPGLVYLLWP-VALGYLRVVTHPTLLGA  60
            T DV++LV A+    P H  A+  +E+ +A    G++  L P V   +LR+VTHP +   
Sbjct  2    TPDVNLLVAASRSDHPHHSVARDWLEQAMADASQGVLLKLQPMVVASFLRLVTHPKIFVN  61

Query  61   PLAPEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHG  120
            P     A+  I+   + P V Q       WP  R++        N VPDA L A   H G
Sbjct  62   PTPMAEALRFIDALLASPGVEQ-AVLGAEWPALRQLCADKALAANDVPDAWLAAAAIHQG  120

Query  121  IATIWSHDRDFRKF  134
               + S D DF++ 
Sbjct  121  EHVV-SFDADFKRL  133


>gi|15608382|ref|NP_215758.1| hypothetical protein Rv1242 [Mycobacterium tuberculosis H37Rv]
 gi|15840687|ref|NP_335724.1| hypothetical protein MT1280 [Mycobacterium tuberculosis CDC1551]
 gi|31792435|ref|NP_854928.1| hypothetical protein Mb1274 [Mycobacterium bovis AF2122/97]
 79 more sequence titles
 Length=143

 Score = 51.6 bits (122),  Expect = 4e-05, Method: Compositional matrix adjust.
 Identities = 37/141 (27%), Positives = 65/141 (47%), Gaps = 7/141 (4%)

Query  6    DVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAPE  65
            D+++L++A     P H +A    +  + G   + L +P   G+LR+ T   +L APL   
Sbjct  5    DINLLLYAVITGFPQHRRAHAWWQDTVNGHTRIGLTYPALFGFLRIATSARVLAAPLPTA  64

Query  66   VAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGI---A  122
             A+  + ++ S+P+V  +        +   + D +    +L  D  L A    +GI   A
Sbjct  65   DAIAYVREWLSQPNVDLLTAGPRHLDIALGLLDKLGTASHLTTDVQLAA----YGIEYDA  120

Query  123  TIWSHDRDFRKFEGIRIRDPF  143
             I S D DF +F  ++  DP 
Sbjct  121  EIHSSDTDFARFADLKWTDPL  141


>gi|240168912|ref|ZP_04747571.1| hypothetical protein MkanA1_06345 [Mycobacterium kansasii ATCC 
12478]
Length=143

 Score = 50.4 bits (119),  Expect = 9e-05, Method: Compositional matrix adjust.
 Identities = 35/138 (26%), Positives = 63/138 (46%), Gaps = 1/138 (0%)

Query  6    DVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAPE  65
            DV++L++A     P H +A       +     + L +P   G+LR+VT+  +L  PL+  
Sbjct  5    DVNLLLYAVITGFPQHRRAYAWWHDTVNSQERIGLTYPAVFGFLRIVTNARILTEPLSAT  64

Query  66   VAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATIW  125
             AV  +  + ++P+V  +  +     +   + + +    NL  D  L A    H  A + 
Sbjct  65   EAVAYVRDWLTQPNVDLLIPSARHLDLALGLLEQLGTASNLTTDVQLAAYAIEHN-AEMH  123

Query  126  SHDRDFRKFEGIRIRDPF  143
            S D DF +F G+   +P 
Sbjct  124  SSDADFARFAGLAWTNPL  141


>gi|340625767|ref|YP_004744219.1| hypothetical protein MCAN_07521 [Mycobacterium canettii CIPT 
140010059]
 gi|340003957|emb|CCC43092.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=142

 Score = 50.1 bits (118),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 40/140 (29%), Positives = 61/140 (44%), Gaps = 2/140 (1%)

Query  5    FDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAP  64
             D +VL+ A     P H   +   +R LA      +   V   +LR+ T+  +   P   
Sbjct  4    LDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIPSPR  63

Query  65   EVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATI  124
              A   I+  T++PH            + R++ D     G+L+PDA L A+   H  A +
Sbjct  64   AAAFAFIDAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVEHHCAVV  123

Query  125  WSHDRDFRKFEGIR-IRDPF  143
             S DRDF +F  +R IR P 
Sbjct  124  -SLDRDFARFTSVRHIRPPL  142


>gi|253797202|ref|YP_003030203.1| toxin [Mycobacterium tuberculosis KZN 1435]
 gi|289552530|ref|ZP_06441740.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|297632757|ref|ZP_06950537.1| toxin [Mycobacterium tuberculosis KZN 4207]
 gi|297729731|ref|ZP_06958849.1| toxin [Mycobacterium tuberculosis KZN R506]
 gi|313657057|ref|ZP_07813937.1| toxin [Mycobacterium tuberculosis KZN V2475]
 gi|253318705|gb|ACT23308.1| toxin [Mycobacterium tuberculosis KZN 1435]
 gi|289437162|gb|EFD19655.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|328456989|gb|AEB02412.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
Length=142

 Score = 49.7 bits (117),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 41/140 (30%), Positives = 62/140 (45%), Gaps = 2/140 (1%)

Query  5    FDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAP  64
             DV+VL+ A     P H   +   +R LA      +   V   +LR+ T+  +   P   
Sbjct  4    IDVNVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLTTNRRIFEIPSPR  63

Query  65   EVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATI  124
              A   +E  T++PH            + R++ D     G+L+PDA L A+   H  A +
Sbjct  64   ADAFAFVEAVTAQPHHLPTSPGPRHLVLLRKLCDEADASGDLIPDAVLGAIAVEHHCAVV  123

Query  125  WSHDRDFRKFEGIR-IRDPF  143
             S DRDF +F  +R IR P 
Sbjct  124  -SLDRDFARFASVRHIRPPI  142


>gi|306774366|ref|ZP_07412703.1| toxin [Mycobacterium tuberculosis SUMu001]
 gi|306974699|ref|ZP_07487360.1| toxin [Mycobacterium tuberculosis SUMu010]
 gi|307082408|ref|ZP_07491578.1| toxin [Mycobacterium tuberculosis SUMu011]
 gi|308217200|gb|EFO76599.1| toxin [Mycobacterium tuberculosis SUMu001]
 gi|308356102|gb|EFP44953.1| toxin [Mycobacterium tuberculosis SUMu010]
 gi|308360056|gb|EFP48907.1| toxin [Mycobacterium tuberculosis SUMu011]
Length=142

 Score = 49.3 bits (116),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 40/140 (29%), Positives = 61/140 (44%), Gaps = 2/140 (1%)

Query  5    FDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAP  64
             DV+VL+ A     P H   +   +R LA      +   V   +LR+ T+  +   P   
Sbjct  4    IDVNVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLTTNRRIFEIPSPR  63

Query  65   EVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATI  124
              A   +E   ++PH            + R++ D     G+L+PDA L A+   H  A +
Sbjct  64   ADAFAFVEAVNAQPHHLPTSPGPRHLVLLRKLCDEADASGDLIPDAVLAAIAVEHHCAVV  123

Query  125  WSHDRDFRKFEGIR-IRDPF  143
             S DRDF +F  +R IR P 
Sbjct  124  -SLDRDFARFASVRHIRPPI  142


>gi|15607889|ref|NP_215263.1| hypothetical protein Rv0749 [Mycobacterium tuberculosis H37Rv]
 gi|15840162|ref|NP_335199.1| hypothetical protein MT0773 [Mycobacterium tuberculosis CDC1551]
 gi|31791935|ref|NP_854428.1| hypothetical protein Mb0770 [Mycobacterium bovis AF2122/97]
 64 more sequence titles
 Length=142

 Score = 48.9 bits (115),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 40/140 (29%), Positives = 61/140 (44%), Gaps = 2/140 (1%)

Query  5    FDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAP  64
             D +VL+ A     P H   +   +R LA      +   V   +LR+ T+  +   P   
Sbjct  4    LDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIPSPR  63

Query  65   EVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATI  124
              A   +E  T++PH            + R++ D     G+L+PDA L A+   H  A +
Sbjct  64   AEAFAFVEAVTAQPHHLPTNPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVGHHCAVV  123

Query  125  WSHDRDFRKFEGIR-IRDPF  143
             S DRDF +F  +R IR P 
Sbjct  124  -SLDRDFARFASVRHIRPPL  142


>gi|121636671|ref|YP_976894.1| hypothetical protein BCG_0799 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224989143|ref|YP_002643830.1| hypothetical protein JTY_0769 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|289442150|ref|ZP_06431894.1| toxin [Mycobacterium tuberculosis T46]
 10 more sequence titles
 Length=142

 Score = 48.9 bits (115),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 40/140 (29%), Positives = 61/140 (44%), Gaps = 2/140 (1%)

Query  5    FDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAP  64
             D +VL+ A     P H   +   +R LA      +   V   +LR+ T+  +   P   
Sbjct  4    LDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLATNRRIFEIPSPR  63

Query  65   EVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATI  124
              A   +E  T++PH            + R++ D     G+L+PDA L A+   H  A +
Sbjct  64   AEAFAFVEAVTAQPHHLPTNPGPRHLVLLRKLCDEADASGDLIPDAVLAAIAVGHHCAVV  123

Query  125  WSHDRDFRKFEGIR-IRDPF  143
             S DRDF +F  +R IR P 
Sbjct  124  -SLDRDFARFASVRHIRPPL  142


>gi|289573902|ref|ZP_06454129.1| toxin [Mycobacterium tuberculosis K85]
 gi|289538333|gb|EFD42911.1| toxin [Mycobacterium tuberculosis K85]
Length=143

 Score = 48.9 bits (115),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 36/141 (26%), Positives = 64/141 (46%), Gaps = 7/141 (4%)

Query  6    DVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAPE  65
            D+++L++A     P H +A    +  + G   + L +P   G+LR+ T   +L APL   
Sbjct  5    DINLLLYAVITGFPQHRRAHAWWQDTVNGHTRIGLTYPALFGFLRIATSARVLAAPLPTA  64

Query  66   VAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGI---A  122
             A+  + ++ S+P+V  +        +   + D +    +   D  L A    +GI   A
Sbjct  65   DAIAYVREWLSQPNVDLLTAGPRHLDIALGLLDKLGTASHRTTDVQLAA----YGIEYDA  120

Query  123  TIWSHDRDFRKFEGIRIRDPF  143
             I S D DF +F  ++  DP 
Sbjct  121  EIHSSDTDFARFADLKWTDPL  141


>gi|340625313|ref|YP_004743765.1| hypothetical protein MCAN_02841 [Mycobacterium canettii CIPT 
140010059]
 gi|340003503|emb|CCC42624.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=142

 Score = 48.1 bits (113),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 39/139 (29%), Positives = 61/139 (44%), Gaps = 2/139 (1%)

Query  5    FDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAP  64
             D +VL+ A     P H   +   +R LA      +   V   +LR+ T+  +   P   
Sbjct  4    LDANVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLTTNRRIFEIPSPR  63

Query  65   EVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATI  124
              A   ++  T++PH            + R++ D     G+L+PDA L A+   H  A +
Sbjct  64   ADAFAFVDAVTAQPHHLPTSPGPRHLMLLRKLCDEADASGDLIPDAVLAAIAVEHHCAVV  123

Query  125  WSHDRDFRKFEGIR-IRDP  142
             S DRDF +F  +R IR P
Sbjct  124  -SLDRDFARFASVRHIRPP  141


>gi|15607418|ref|NP_214791.1| hypothetical protein Rv0277c [Mycobacterium tuberculosis H37Rv]
 gi|15839658|ref|NP_334695.1| hypothetical protein MT0289 [Mycobacterium tuberculosis CDC1551]
 gi|31791455|ref|NP_853948.1| hypothetical protein Mb0283c [Mycobacterium bovis AF2122/97]
 64 more sequence titles
 Length=142

 Score = 48.1 bits (113),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 40/140 (29%), Positives = 61/140 (44%), Gaps = 2/140 (1%)

Query  5    FDVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAP  64
             DV+VL+ A     P H   +   +R LA      +   V   +LR+ T+  +   P   
Sbjct  4    IDVNVLLAAHRGDHPNHRTVRPWFDRLLAADDPFTVPNLVWASFLRLTTNRRIFEIPSPR  63

Query  65   EVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATI  124
              A   +E   ++PH            + R++ D     G+L+PDA L A+   H  A +
Sbjct  64   ADAFAFVEAVNAQPHHLPTSPGPRHLVLLRKLCDEADASGDLIPDAVLGAIAVEHHCAVV  123

Query  125  WSHDRDFRKFEGIR-IRDPF  143
             S DRDF +F  +R IR P 
Sbjct  124  -SLDRDFARFASVRHIRPPI  142


>gi|33865109|ref|NP_896668.1| hypothetical protein SYNW0573 [Synechococcus sp. WH 8102]
 gi|33638793|emb|CAE07088.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length=144

 Score = 47.4 bits (111),  Expect = 7e-04, Method: Compositional matrix adjust.
 Identities = 43/133 (33%), Positives = 60/133 (46%), Gaps = 15/133 (11%)

Query  17   ASPFHDKAKTLVERF-LAGPGLVYLLWPVALGYLRVVTHPTLLG-APLAPEVAVENIEQF  74
            ASP H    + V+ +       V      ALG +R+V  P ++G A L P  A   +E F
Sbjct  17   ASPNHKHHSSAVQYWEKQASQQVLFCTTTALGLVRLVMQPKVMGGAALMPADASALLETF  76

Query  75   TSRPHVRQVGEANGFWPVY---RRVADPVKPRGNLVPDAHLVALMRHHGIATIW---SHD  128
              +P V      +  W V+    R AD + PR  L  DAHL AL     I   W   S D
Sbjct  77   LQQPGVSHAQPTSDGWDVFHLLMRQAD-LTPR--LCTDAHLAAL----AITNQWRLVSFD  129

Query  129  RDFRKFEGIRIRD  141
            +DF+ F G+ + +
Sbjct  130  QDFQLFSGLNLLE  142


>gi|308273612|emb|CBX30214.1| unknown protein [uncultured Desulfobacterium sp.]
Length=150

 Score = 47.0 bits (110),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 71/144 (50%), Gaps = 7/144 (4%)

Query  6    DVDVLVHATHRASPFHDKAKTLVERFL-----AGPGLVYLLWPVALGYLRVVTHPTLLGA  60
            D +++V+A + ASPFH +AK  VER +      G   V L   V + ++ V+T    L A
Sbjct  5    DTNLIVYAHNIASPFHKRAKQFVERVMNERNAEGQLAVCLPAQVLMEFVHVITWQH-LEA  63

Query  61   PLAPEVAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHG  120
            PL+ + A++ ++ +     V+ + + +     +  ++  V  R  +   A    L  +H 
Sbjct  64   PLSLQEAIQIVQDYLDSG-VKIIFQQDSRIQTFISLSGSVTTRKKVFDLALASTLKDNHT  122

Query  121  IATIWSHDRDFRKFEGIRIRDPFS  144
            I    ++  DF+ F+ +++ +P S
Sbjct  123  IGLYTNNVDDFKGFDFLKVINPLS  146


>gi|147679127|ref|YP_001213342.1| nucleic acid-binding protein [Pelotomaculum thermopropionicum 
SI]
 gi|146275224|dbj|BAF60973.1| predicted nucleic acid-binding protein [Pelotomaculum thermopropionicum 
SI]
Length=145

 Score = 46.6 bits (109),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 37/138 (27%), Positives = 69/138 (50%), Gaps = 5/138 (3%)

Query  6    DVDVLVHATHRASPFHDKAKTLVERFLAGPGLVYLLWPVALGYLRVVTHPTLLGAPLAPE  65
            D +VLV+A +  +P H  ++  VE          L   V L +  +VT    +  PL PE
Sbjct  5    DTNVLVYAINTDAPQHTASRKFVEAVQQKNIDSVLPVQVLLEFYAIVTDHRRVTRPLEPE  64

Query  66   VAVENIEQFTSRPHVRQVGEANGFWPVYRRVADPVKPRGNLVPDAHLVALMRHHGIATIW  125
             A + +    +   V   G  +  + + + ++  +K +G  + DA+LVA M+  G++ + 
Sbjct  65   TAWKQVNALRAIFPVIDGGLKS--FDLLKEIS--LKTKGADIFDAYLVAQMKACGVSLLC  120

Query  126  SHD-RDFRKFEGIRIRDP  142
            +++ +DF +FEGI  + P
Sbjct  121  TYNIKDFSRFEGILAQTP  138



Lambda     K      H
   0.325    0.141    0.452 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 128154014136


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40