BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3705c
Length=214
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610841|ref|NP_218222.1| hypothetical protein Rv3705c [Mycob... 436 1e-120
gi|148824909|ref|YP_001289663.1| hypothetical protein TBFG_13736... 433 8e-120
gi|254552816|ref|ZP_05143263.1| hypothetical protein Mtube_20612... 426 8e-118
gi|240172815|ref|ZP_04751474.1| hypothetical protein MkanA1_2611... 358 4e-97
gi|254773402|ref|ZP_05214918.1| hypothetical protein MaviaA2_018... 352 2e-95
gi|15828245|ref|NP_302508.1| hypothetical protein ML2320 [Mycoba... 347 6e-94
gi|183985185|ref|YP_001853476.1| hypothetical protein MMAR_5216 ... 343 1e-92
gi|296166795|ref|ZP_06849214.1| conserved hypothetical protein [... 343 1e-92
gi|118465295|ref|YP_879683.1| hypothetical protein MAV_0398 [Myc... 343 1e-92
gi|41406405|ref|NP_959241.1| hypothetical protein MAP0307c [Myco... 343 1e-92
gi|118619446|ref|YP_907778.1| hypothetical protein MUL_4290 [Myc... 342 2e-92
gi|342861931|ref|ZP_08718575.1| hypothetical protein MCOL_23690 ... 342 2e-92
gi|254821105|ref|ZP_05226106.1| hypothetical protein MintA_14307... 337 5e-91
gi|333992625|ref|YP_004525239.1| hypothetical protein JDM601_398... 328 2e-88
gi|120406433|ref|YP_956262.1| hypothetical protein Mvan_5487 [My... 317 7e-85
gi|145221906|ref|YP_001132584.1| hypothetical protein Mflv_1314 ... 306 1e-81
gi|118473332|ref|YP_890470.1| hypothetical protein MSMEG_6251 [M... 306 1e-81
gi|108801846|ref|YP_642043.1| hypothetical protein Mmcs_4883 [My... 302 2e-80
gi|169627457|ref|YP_001701106.1| hypothetical protein MAB_0353 [... 283 1e-74
gi|289571948|ref|ZP_06452175.1| LOW QUALITY PROTEIN: conserved h... 249 3e-64
gi|169627456|ref|YP_001701105.1| hypothetical protein MAB_0352 [... 101 8e-20
gi|317506124|ref|ZP_07963948.1| hypothetical protein HMPREF9336_... 86.7 2e-15
gi|289763884|ref|ZP_06523262.1| conserved hypothetical protein [... 84.7 7e-15
gi|317506123|ref|ZP_07963947.1| hypothetical protein HMPREF9336_... 75.5 5e-12
gi|317508331|ref|ZP_07966007.1| hypothetical protein HMPREF9336_... 63.2 2e-08
gi|169629506|ref|YP_001703155.1| hypothetical protein MAB_2420c ... 52.8 3e-05
gi|256391534|ref|YP_003113098.1| hypothetical protein Caci_2339 ... 52.8 3e-05
gi|169629507|ref|YP_001703156.1| hypothetical protein MAB_2421c ... 51.2 1e-04
gi|169631988|ref|YP_001705637.1| hypothetical protein MAB_4915c ... 50.1 2e-04
gi|296394419|ref|YP_003659303.1| hypothetical protein Srot_2016 ... 43.1 0.023
gi|317507457|ref|ZP_07965185.1| hypothetical protein HMPREF9336_... 41.6 0.074
gi|254774295|ref|ZP_05215811.1| serine/threonine-protein kinase ... 41.2 0.094
gi|118465657|ref|YP_880659.1| serine/threonine protein kinase [M... 40.8 0.14
gi|41408603|ref|NP_961439.1| hypothetical protein MAP2505 [Mycob... 39.7 0.26
gi|169629505|ref|YP_001703154.1| hypothetical protein MAB_2419c ... 37.7 1.2
gi|240169452|ref|ZP_04748111.1| serine/threonine-protein kinase ... 37.4 1.3
gi|254820140|ref|ZP_05225141.1| serine/threonine-protein kinase ... 37.4 1.5
gi|339297889|gb|AEJ49999.1| putative transmembrane serine/threon... 37.4 1.6
gi|121637194|ref|YP_977417.1| putative transmembrane serine/thre... 37.0 1.7
gi|289554945|ref|ZP_06444155.1| transmembrane serine/threonine-p... 37.0 1.8
gi|339294249|gb|AEJ46360.1| transmembrane serine/threonine-prote... 37.0 1.8
gi|307083826|ref|ZP_07492939.1| hypothetical protein TMLG_02601 ... 37.0 1.8
gi|296170175|ref|ZP_06851770.1| non-specific serine/threonine pr... 37.0 1.8
gi|15608406|ref|NP_215782.1| transmembrane serine/threonine-prot... 37.0 1.9
gi|289757364|ref|ZP_06516742.1| transmembrane serine/threonine-p... 37.0 1.9
gi|289573926|ref|ZP_06454153.1| transmembrane serine/threonine-p... 37.0 1.9
gi|15840712|ref|NP_335749.1| serine/threonine protein kinase [My... 37.0 1.9
gi|31792458|ref|NP_854951.1| transmembrane serine/threonine-prot... 37.0 1.9
gi|340626279|ref|YP_004744731.1| putative transmembrane serine/t... 37.0 1.9
gi|289446857|ref|ZP_06436601.1| transmembrane serine/threonine-p... 37.0 1.9
>gi|15610841|ref|NP_218222.1| hypothetical protein Rv3705c [Mycobacterium tuberculosis H37Rv]
gi|15843324|ref|NP_338361.1| hypothetical protein MT3808 [Mycobacterium tuberculosis CDC1551]
gi|31794876|ref|NP_857369.1| hypothetical protein Mb3731c [Mycobacterium bovis AF2122/97]
73 more sequence titles
Length=214
Score = 436 bits (1121), Expect = 1e-120, Method: Compositional matrix adjust.
Identities = 214/214 (100%), Positives = 214/214 (100%), Gaps = 0/214 (0%)
Query 1 MRIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRP 60
MRIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRP
Sbjct 1 MRIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRP 60
Query 61 FQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAA 120
FQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAA
Sbjct 61 FQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAA 120
Query 121 DRAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQT 180
DRAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQT
Sbjct 121 DRAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQT 180
Query 181 RLRENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG 214
RLRENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG
Sbjct 181 RLRENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG 214
>gi|148824909|ref|YP_001289663.1| hypothetical protein TBFG_13736 [Mycobacterium tuberculosis F11]
gi|148723436|gb|ABR08061.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
Length=214
Score = 433 bits (1113), Expect = 8e-120, Method: Compositional matrix adjust.
Identities = 213/214 (99%), Positives = 213/214 (99%), Gaps = 0/214 (0%)
Query 1 MRIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRP 60
MRIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRP
Sbjct 1 MRIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRP 60
Query 61 FQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAA 120
FQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAA
Sbjct 61 FQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAA 120
Query 121 DRAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQT 180
DRAFHRVVDRTVGCSGQTTAIHLD GTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQT
Sbjct 121 DRAFHRVVDRTVGCSGQTTAIHLDAGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQT 180
Query 181 RLRENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG 214
RLRENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG
Sbjct 181 RLRENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG 214
>gi|254552816|ref|ZP_05143263.1| hypothetical protein Mtube_20612 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length=214
Score = 426 bits (1096), Expect = 8e-118, Method: Compositional matrix adjust.
Identities = 209/214 (98%), Positives = 211/214 (99%), Gaps = 0/214 (0%)
Query 1 MRIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRP 60
MRIAAAVVSIGLAVIAGFAVPVADAH PG++SYAVLGKGSVGNIVGAPMGWEAVFTRP
Sbjct 1 MRIAAAVVSIGLAVIAGFAVPVADAHRRSPGLLSYAVLGKGSVGNIVGAPMGWEAVFTRP 60
Query 61 FQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAA 120
FQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAA
Sbjct 61 FQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAA 120
Query 121 DRAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQT 180
DRAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQT
Sbjct 121 DRAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQT 180
Query 181 RLRENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG 214
RLRENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG
Sbjct 181 RLRENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG 214
>gi|240172815|ref|ZP_04751474.1| hypothetical protein MkanA1_26117 [Mycobacterium kansasii ATCC
12478]
Length=221
Score = 358 bits (918), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 171/194 (89%), Positives = 180/194 (93%), Gaps = 0/194 (0%)
Query 21 PVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRPFQAFWVELPACNNWVDIGLP 80
PVA+AHPSEPGVV+YAVLG+GSVGNIVGAPMGWE+VFT PFQA+ V+LP CNNW DIGLP
Sbjct 27 PVAEAHPSEPGVVNYAVLGRGSVGNIVGAPMGWESVFTEPFQAYAVDLPVCNNWADIGLP 86
Query 81 EVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFHRVVDRTVGCSGQTTA 140
EVY+DPDLASFNGA TQTSATDQTH VKQAVGVFASNDAA RAFHRVVDRTVGCSGQTTA
Sbjct 87 EVYNDPDLASFNGAITQTSATDQTHYVKQAVGVFASNDAAGRAFHRVVDRTVGCSGQTTA 146
Query 141 IHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQTRLRENVLLQAKVCQSGNAGP 200
+HLD+GTTQVWSF GGP T TD AWTKQEAGTDRRCF QTRLRENVLLQAKVCQSGN GP
Sbjct 147 MHLDNGTTQVWSFDGGPPTATDSAWTKQEAGTDRRCFDQTRLRENVLLQAKVCQSGNGGP 206
Query 201 AVNVLAGAMQNTLG 214
AVNVLAGAMQN LG
Sbjct 207 AVNVLAGAMQNILG 220
>gi|254773402|ref|ZP_05214918.1| hypothetical protein MaviaA2_01816 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=201
Score = 352 bits (903), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 169/196 (87%), Positives = 182/196 (93%), Gaps = 0/196 (0%)
Query 19 AVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRPFQAFWVELPACNNWVDIG 78
A+PVA AHPSEPGVV+YAVLGKGSVGNIVG PMGWE+VFT+P Q+ WV+LP CNNW DIG
Sbjct 5 ALPVAAAHPSEPGVVNYAVLGKGSVGNIVGGPMGWESVFTQPGQSDWVDLPECNNWADIG 64
Query 79 LPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFHRVVDRTVGCSGQT 138
LPEV++DPDLASFNGA TQTSATDQTHLVKQAVGVFA+NDAADRAFHRVVDRTVGCSGQT
Sbjct 65 LPEVFNDPDLASFNGAVTQTSATDQTHLVKQAVGVFATNDAADRAFHRVVDRTVGCSGQT 124
Query 139 TAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQTRLRENVLLQAKVCQSGNA 198
TAIHLD+G+TQVWSF GGP+ DE WTKQEAGTDRRCF QTRLRENV+LQAKVCQSGNA
Sbjct 125 TAIHLDNGSTQVWSFDGGPAGPADENWTKQEAGTDRRCFNQTRLRENVVLQAKVCQSGNA 184
Query 199 GPAVNVLAGAMQNTLG 214
GPAVNVLAGAMQN LG
Sbjct 185 GPAVNVLAGAMQNALG 200
>gi|15828245|ref|NP_302508.1| hypothetical protein ML2320 [Mycobacterium leprae TN]
gi|221230722|ref|YP_002504138.1| hypothetical protein MLBr_02320 [Mycobacterium leprae Br4923]
gi|13093938|emb|CAC31836.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933829|emb|CAR72418.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=215
Score = 347 bits (890), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 170/214 (80%), Positives = 182/214 (86%), Gaps = 4/214 (1%)
Query 1 MRIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRP 60
+RI+A V+S+GL G VPVA A PSEPGVVSYAVLGKGSVGNI+G PMGWE++ T P
Sbjct 5 IRISAVVMSVGL----GLGVPVASARPSEPGVVSYAVLGKGSVGNIIGRPMGWESLLTEP 60
Query 61 FQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAA 120
QA+ V+LP CNNW DIGLPEVY D DLASFNGA TQTSA DQTH VKQAVGVFA+NDAA
Sbjct 61 LQAYSVDLPMCNNWADIGLPEVYHDVDLASFNGAITQTSANDQTHFVKQAVGVFATNDAA 120
Query 121 DRAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQT 180
RAFHRVVDRTVGCSGQTTA+HLD+GTTQVWSF GG T D WTKQEAGTDRRCFVQT
Sbjct 121 VRAFHRVVDRTVGCSGQTTAMHLDNGTTQVWSFVGGTPTYADANWTKQEAGTDRRCFVQT 180
Query 181 RLRENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG 214
RLRENVLLQ KVCQ GNAGPAVNVLAGAMQN LG
Sbjct 181 RLRENVLLQTKVCQPGNAGPAVNVLAGAMQNALG 214
>gi|183985185|ref|YP_001853476.1| hypothetical protein MMAR_5216 [Mycobacterium marinum M]
gi|183178511|gb|ACC43621.1| conserved hypothetical secreted protein [Mycobacterium marinum
M]
Length=221
Score = 343 bits (880), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 173/214 (81%), Positives = 184/214 (86%), Gaps = 0/214 (0%)
Query 1 MRIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRP 60
MR A A +GL V A A A+PS+PGVVSYAVLGKGSVGNIVGAPMGWE+VFT P
Sbjct 7 MRPALAAALLGLGVTASLVASPALANPSDPGVVSYAVLGKGSVGNIVGAPMGWESVFTEP 66
Query 61 FQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAA 120
FQA+ V+LP CNNW DIGLPEV++DPDLASFNGATTQTSATDQTH VKQAVGVFA+ DAA
Sbjct 67 FQAYSVDLPVCNNWADIGLPEVFNDPDLASFNGATTQTSATDQTHYVKQAVGVFATTDAA 126
Query 121 DRAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQT 180
RAFHRVVDRTVGCSGQTTA+HLD+GTTQVWSF G T TD AWTKQEA TDRRCF QT
Sbjct 127 SRAFHRVVDRTVGCSGQTTAMHLDNGTTQVWSFDGPAPTATDAAWTKQEADTDRRCFNQT 186
Query 181 RLRENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG 214
RLRENVLLQAKVCQSGN GPAVNVLAGAMQNTLG
Sbjct 187 RLRENVLLQAKVCQSGNGGPAVNVLAGAMQNTLG 220
>gi|296166795|ref|ZP_06849214.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897844|gb|EFG77431.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=217
Score = 343 bits (880), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 173/214 (81%), Positives = 186/214 (87%), Gaps = 0/214 (0%)
Query 1 MRIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRP 60
MRI AAVV G AV VPVA AHPSEPGVV+YAVLGKGSVGNIVG PMGWE+VFT+P
Sbjct 3 MRICAAVVVAGAAVGTALGVPVAAAHPSEPGVVNYAVLGKGSVGNIVGGPMGWESVFTQP 62
Query 61 FQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAA 120
Q WV++P CNNW DIGLP+VYDDPDLASFNGA TQTSATDQTH VKQAVGVFA+NDAA
Sbjct 63 VQNDWVDVPVCNNWADIGLPDVYDDPDLASFNGAVTQTSATDQTHFVKQAVGVFATNDAA 122
Query 121 DRAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQT 180
RAFHR+VDRTVGCSGQTTA+HLD+G TQVWSF GGP D +WTKQEAGTDRRCF QT
Sbjct 123 RRAFHRLVDRTVGCSGQTTAMHLDNGATQVWSFDGGPPGPADASWTKQEAGTDRRCFNQT 182
Query 181 RLRENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG 214
RLRENV+LQAKVCQSGNAGPAV+VLAGAMQN LG
Sbjct 183 RLRENVVLQAKVCQSGNAGPAVDVLAGAMQNALG 216
>gi|118465295|ref|YP_879683.1| hypothetical protein MAV_0398 [Mycobacterium avium 104]
gi|118166582|gb|ABK67479.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=220
Score = 343 bits (879), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 164/189 (87%), Positives = 175/189 (93%), Gaps = 0/189 (0%)
Query 26 HPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRPFQAFWVELPACNNWVDIGLPEVYDD 85
HPSEPGVV+YAVLGKGSVGNIVG PMGWE+VFT+P Q WV+LP CNNW DIGLPEV++D
Sbjct 31 HPSEPGVVNYAVLGKGSVGNIVGGPMGWESVFTQPGQGDWVDLPECNNWADIGLPEVFND 90
Query 86 PDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFHRVVDRTVGCSGQTTAIHLDD 145
PDLASFNGA TQTSATDQTHLVKQAVGVFA+NDAADRAFHRVVDRTVGCSGQTTAIHLD+
Sbjct 91 PDLASFNGAVTQTSATDQTHLVKQAVGVFATNDAADRAFHRVVDRTVGCSGQTTAIHLDN 150
Query 146 GTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQTRLRENVLLQAKVCQSGNAGPAVNVL 205
G+TQVWSF GGP+ DE WTKQEAGTDRRCF QTRLRENV+LQAKVCQSGNAGPAVNVL
Sbjct 151 GSTQVWSFDGGPAGPADENWTKQEAGTDRRCFNQTRLRENVVLQAKVCQSGNAGPAVNVL 210
Query 206 AGAMQNTLG 214
AGAMQN LG
Sbjct 211 AGAMQNALG 219
>gi|41406405|ref|NP_959241.1| hypothetical protein MAP0307c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394754|gb|AAS02624.1| hypothetical protein MAP_0307c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460881|gb|EGO39766.1| hypothetical protein MAPs_37040 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=235
Score = 343 bits (879), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 164/189 (87%), Positives = 175/189 (93%), Gaps = 0/189 (0%)
Query 26 HPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRPFQAFWVELPACNNWVDIGLPEVYDD 85
HPSEPGVV+YAVLGKGSVGNIVG PMGWE+VFT+P Q WV+LP CNNW DIGLPEV++D
Sbjct 46 HPSEPGVVNYAVLGKGSVGNIVGGPMGWESVFTQPGQGDWVDLPECNNWADIGLPEVFND 105
Query 86 PDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFHRVVDRTVGCSGQTTAIHLDD 145
PDLASFNGA TQTSATDQTHLVKQAVGVFA+NDAADRAFHRVVDRTVGCSGQTTAIHLD+
Sbjct 106 PDLASFNGAVTQTSATDQTHLVKQAVGVFATNDAADRAFHRVVDRTVGCSGQTTAIHLDN 165
Query 146 GTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQTRLRENVLLQAKVCQSGNAGPAVNVL 205
G+TQVWSF GGP+ DE WTKQEAGTDRRCF QTRLRENV+LQAKVCQSGNAGPAVNVL
Sbjct 166 GSTQVWSFDGGPAGPADENWTKQEAGTDRRCFNQTRLRENVVLQAKVCQSGNAGPAVNVL 225
Query 206 AGAMQNTLG 214
AGAMQN LG
Sbjct 226 AGAMQNALG 234
>gi|118619446|ref|YP_907778.1| hypothetical protein MUL_4290 [Mycobacterium ulcerans Agy99]
gi|118571556|gb|ABL06307.1| conserved hypothetical secreted protein [Mycobacterium ulcerans
Agy99]
Length=232
Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 172/214 (81%), Positives = 183/214 (86%), Gaps = 0/214 (0%)
Query 1 MRIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRP 60
MR A A +GL V A A A+PS+PGVVSYAVLGKGSVGNIVGAPMGWE+VFT P
Sbjct 18 MRPALAAALLGLGVTASLVASPALANPSDPGVVSYAVLGKGSVGNIVGAPMGWESVFTEP 77
Query 61 FQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAA 120
FQA+ V+LP CNNW DIGLPEV++DPDLASFNGATTQTSATDQTH VKQAVGVFA+ DAA
Sbjct 78 FQAYSVDLPVCNNWADIGLPEVFNDPDLASFNGATTQTSATDQTHYVKQAVGVFATTDAA 137
Query 121 DRAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQT 180
RAFHRVVDRTVGCSGQTTA+HLD+GTTQVWSF G T TD AWTKQEA TDRRCF QT
Sbjct 138 SRAFHRVVDRTVGCSGQTTAMHLDNGTTQVWSFDGPAPTATDAAWTKQEADTDRRCFNQT 197
Query 181 RLRENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG 214
RLRENVLLQAKVCQS N GPAVNVLAGAMQNTLG
Sbjct 198 RLRENVLLQAKVCQSSNGGPAVNVLAGAMQNTLG 231
>gi|342861931|ref|ZP_08718575.1| hypothetical protein MCOL_23690 [Mycobacterium colombiense CECT
3035]
gi|342130471|gb|EGT83780.1| hypothetical protein MCOL_23690 [Mycobacterium colombiense CECT
3035]
Length=223
Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/213 (81%), Positives = 187/213 (88%), Gaps = 0/213 (0%)
Query 2 RIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRPF 61
++ A ++IG + A+PVA AHPSEPGVV+YAVLGKGSVGNIVG MGWE+VFT+P
Sbjct 10 QLLGAAMAIGSGLAGAAAIPVAAAHPSEPGVVNYAVLGKGSVGNIVGGQMGWESVFTQPG 69
Query 62 QAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAAD 121
Q WV+LP CNNW DIGLPEVY+DPDLASFNGA TQTSATDQTHLVKQAVGVFA+N+AA
Sbjct 70 QGDWVDLPDCNNWADIGLPEVYNDPDLASFNGAVTQTSATDQTHLVKQAVGVFATNEAAG 129
Query 122 RAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQTR 181
RAFHRVVDRTVGCSGQTTA+HLD+GTTQVWSF GGP+ DE WTKQEAGTDRRCF QTR
Sbjct 130 RAFHRVVDRTVGCSGQTTALHLDNGTTQVWSFDGGPAGPADENWTKQEAGTDRRCFNQTR 189
Query 182 LRENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG 214
LRENVLLQAKVCQSGNAGPAVNVLAGAMQN LG
Sbjct 190 LRENVLLQAKVCQSGNAGPAVNVLAGAMQNALG 222
>gi|254821105|ref|ZP_05226106.1| hypothetical protein MintA_14307 [Mycobacterium intracellulare
ATCC 13950]
Length=220
Score = 337 bits (865), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 171/213 (81%), Positives = 184/213 (87%), Gaps = 0/213 (0%)
Query 2 RIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRPF 61
++ AV+++G AV A VA AHPSEPGVV+YAVLGKGSVGNIVG PMGWE+VFT+P
Sbjct 7 QVHRAVLTVGFAVAGTVAPAVAAAHPSEPGVVNYAVLGKGSVGNIVGGPMGWESVFTQPG 66
Query 62 QAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAAD 121
Q WV+LP CNNW DIGL EVYDDPDLASFNGA TQTSA DQTHLVKQAVGVFA+ DAA
Sbjct 67 QGPWVDLPECNNWADIGLSEVYDDPDLASFNGAVTQTSANDQTHLVKQAVGVFATPDAAA 126
Query 122 RAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQTR 181
RAFHRVVDRTVGCSGQTTAIHLD+G+TQVWSF GGP+ DE WTKQEAGTDRRCF QTR
Sbjct 127 RAFHRVVDRTVGCSGQTTAIHLDNGSTQVWSFDGGPAGPADENWTKQEAGTDRRCFDQTR 186
Query 182 LRENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG 214
LRENVLLQAKVCQ GNAGPAVNVLAGAMQN LG
Sbjct 187 LRENVLLQAKVCQPGNAGPAVNVLAGAMQNALG 219
>gi|333992625|ref|YP_004525239.1| hypothetical protein JDM601_3985 [Mycobacterium sp. JDM601]
gi|333488593|gb|AEF37985.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=217
Score = 328 bits (842), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/216 (76%), Positives = 178/216 (83%), Gaps = 2/216 (0%)
Query 1 MRIAAA--VVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFT 58
MR AA V +GLAV + P A A PSEPGVVSYAVL KGSVGNIVGAPM W+A
Sbjct 1 MRAAATFMVAGLGLAVTSTATAPAAVARPSEPGVVSYAVLPKGSVGNIVGAPMTWDAPSG 60
Query 59 RPFQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASND 118
+PFQAFWV+ PACNNW DIGL EVY+DPDLASFN A TQT+A DQTH VKQAVGVFA+
Sbjct 61 QPFQAFWVDDPACNNWADIGLSEVYNDPDLASFNSAVTQTAANDQTHFVKQAVGVFATEA 120
Query 119 AADRAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFV 178
AADRAFHR+ DRT GCSG+TTA+HLD+G TQVW+F GGP+ TD AW KQEAGTDRRCF
Sbjct 121 AADRAFHRITDRTAGCSGRTTAMHLDNGATQVWAFDGGPAGATDAAWVKQEAGTDRRCFN 180
Query 179 QTRLRENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG 214
QTRLR NVLLQAKVCQSGNAGPAVNVLAGAMQN+LG
Sbjct 181 QTRLRLNVLLQAKVCQSGNAGPAVNVLAGAMQNSLG 216
>gi|120406433|ref|YP_956262.1| hypothetical protein Mvan_5487 [Mycobacterium vanbaalenii PYR-1]
gi|119959251|gb|ABM16256.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=231
Score = 317 bits (812), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 155/213 (73%), Positives = 177/213 (84%), Gaps = 3/213 (1%)
Query 2 RIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRPF 61
R+AA + L+V G A P A A PS+PGVV+YAVL KGSVGNIVGA +G+E+ FT PF
Sbjct 21 RVAAGIAIAALSV--GVAAP-ASARPSDPGVVNYAVLSKGSVGNIVGARLGFESTFTDPF 77
Query 62 QAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAAD 121
QAF+V+ PACNNW DIGLPEVY+DPDLA+F+GA Q S TD H VKQAVGVFA+ DAA+
Sbjct 78 QAFYVDNPACNNWADIGLPEVYNDPDLAAFSGAVAQESPTDARHFVKQAVGVFATTDAAN 137
Query 122 RAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQTR 181
RA HR+VDRTVGC+GQTTA+HLD+ TTQVW+F GP+T TD W KQEAGTDRRCFV TR
Sbjct 138 RALHRLVDRTVGCNGQTTAMHLDNFTTQVWTFTAGPTTATDANWVKQEAGTDRRCFVTTR 197
Query 182 LRENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG 214
LRENVLLQAKVCQSGN GPAV+VLAGAMQNTLG
Sbjct 198 LRENVLLQAKVCQSGNGGPAVDVLAGAMQNTLG 230
>gi|145221906|ref|YP_001132584.1| hypothetical protein Mflv_1314 [Mycobacterium gilvum PYR-GCK]
gi|315446358|ref|YP_004079237.1| hypothetical protein Mspyr1_48650 [Mycobacterium sp. Spyr1]
gi|145214392|gb|ABP43796.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315264661|gb|ADU01403.1| hypothetical protein Mspyr1_48650 [Mycobacterium sp. Spyr1]
Length=224
Score = 306 bits (785), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/189 (78%), Positives = 163/189 (87%), Gaps = 0/189 (0%)
Query 26 HPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRPFQAFWVELPACNNWVDIGLPEVYDD 85
PS+PGVV+YAVL KGSVGNIVGA MG+E+ F PFQAF+V+ PACNNW DIGLPEVY+D
Sbjct 35 RPSDPGVVNYAVLNKGSVGNIVGARMGFESTFAAPFQAFYVDNPACNNWADIGLPEVYND 94
Query 86 PDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFHRVVDRTVGCSGQTTAIHLDD 145
PDLA+F+GA TQ S TD THLVKQAVGVFA+NDAA RA +RVVDRTV C+GQTTA+HL +
Sbjct 95 PDLAAFSGAATQESPTDATHLVKQAVGVFATNDAARRAMYRVVDRTVACNGQTTAMHLSN 154
Query 146 GTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQTRLRENVLLQAKVCQSGNAGPAVNVL 205
TTQVW+F GP++ D W KQEAGTDRRCFV TRLRENVLLQAKVCQSGN GPAVNVL
Sbjct 155 FTTQVWTFTAGPTSAADANWVKQEAGTDRRCFVTTRLRENVLLQAKVCQSGNGGPAVNVL 214
Query 206 AGAMQNTLG 214
AGAMQNTLG
Sbjct 215 AGAMQNTLG 223
>gi|118473332|ref|YP_890470.1| hypothetical protein MSMEG_6251 [Mycobacterium smegmatis str.
MC2 155]
gi|118174619|gb|ABK75515.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=217
Score = 306 bits (784), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/212 (72%), Positives = 173/212 (82%), Gaps = 0/212 (0%)
Query 3 IAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRPFQ 62
+ A V +G+A + +V A A PS+PGVVSYAV+ KGSV NIVGAP+ WE+ FT PFQ
Sbjct 5 MRAVTVGLGVAGLVLASVAPAAARPSDPGVVSYAVMPKGSVSNIVGAPIRWESEFTAPFQ 64
Query 63 AFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADR 122
AF V+ P CNNW DIGLPEV++DPDLASF GAT QT+A D THLVKQAVGVFA+ DAADR
Sbjct 65 AFSVDNPVCNNWADIGLPEVFNDPDLASFGGATAQTAAGDATHLVKQAVGVFATVDAADR 124
Query 123 AFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQTRL 182
A+HRVVDRTVGC+GQTTA+HLD+ T+VW+F GGP+ D W KQEAGTDRRCF TR
Sbjct 125 AYHRVVDRTVGCAGQTTAMHLDNFHTEVWTFTGGPAGPADADWVKQEAGTDRRCFNTTRK 184
Query 183 RENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG 214
RENVLLQAKVCQSGN GPAVNVLAGAMQNTLG
Sbjct 185 RENVLLQAKVCQSGNGGPAVNVLAGAMQNTLG 216
>gi|108801846|ref|YP_642043.1| hypothetical protein Mmcs_4883 [Mycobacterium sp. MCS]
gi|119870999|ref|YP_940951.1| hypothetical protein Mkms_4972 [Mycobacterium sp. KMS]
gi|126437814|ref|YP_001073505.1| hypothetical protein Mjls_5251 [Mycobacterium sp. JLS]
gi|108772265|gb|ABG10987.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119697088|gb|ABL94161.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126237614|gb|ABO01015.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=212
Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/189 (76%), Positives = 160/189 (85%), Gaps = 0/189 (0%)
Query 26 HPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRPFQAFWVELPACNNWVDIGLPEVYDD 85
PS+PGVV+YAVLGKGSVGNIVGA + WE+ FT P QAF+V+ P CNNW DIGLPEVY+D
Sbjct 23 RPSDPGVVNYAVLGKGSVGNIVGATLRWESFFTNPVQAFYVDNPVCNNWADIGLPEVYND 82
Query 86 PDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFHRVVDRTVGCSGQTTAIHLDD 145
PDLASFNGA Q S TD THLVKQA+GV+A+ DAA+RA+ RVVDRT GC+GQTTA+HLD+
Sbjct 83 PDLASFNGAVAQESPTDATHLVKQAIGVYATTDAAERAYRRVVDRTAGCAGQTTAMHLDN 142
Query 146 GTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQTRLRENVLLQAKVCQSGNAGPAVNVL 205
TTQVW+F GGP+ D W KQEAGTDRRCF TR RENVLLQAKVCQSGN GPAVNVL
Sbjct 143 FTTQVWTFTGGPAGVADADWVKQEAGTDRRCFTTTRKRENVLLQAKVCQSGNGGPAVNVL 202
Query 206 AGAMQNTLG 214
AGAMQNTLG
Sbjct 203 AGAMQNTLG 211
>gi|169627457|ref|YP_001701106.1| hypothetical protein MAB_0353 [Mycobacterium abscessus ATCC 19977]
gi|169239424|emb|CAM60452.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=216
Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/215 (67%), Positives = 163/215 (76%), Gaps = 1/215 (0%)
Query 1 MRIAAAVV-SIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTR 59
MR A V+ S+ A A P A A PS+PGVV+YAVL +GSV N++GA +G + FT+
Sbjct 1 MRTARTVLTSVAAAAFGLTATPAAGAVPSDPGVVNYAVLARGSVSNVIGAQLGSHSEFTQ 60
Query 60 PFQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDA 119
PFQAF V++P CNNW DIGL EVY DPDLASF GATTQ SATD THLVKQA+GVFA++DA
Sbjct 61 PFQAFSVDVPDCNNWSDIGLDEVYADPDLASFRGATTQDSATDATHLVKQAIGVFANSDA 120
Query 120 ADRAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQ 179
ADRA+HRVVDRT GCSGQT + LDDG +VW+F G + TD AW K+EAG DRRCF Q
Sbjct 121 ADRAYHRVVDRTRGCSGQTATLILDDGRREVWTFTGPAAGATDAAWMKEEAGVDRRCFNQ 180
Query 180 TRLRENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG 214
TR RENVLLQAKVCQ GN AVNVLA MQN LG
Sbjct 181 TRRRENVLLQAKVCQPGNGSLAVNVLANTMQNGLG 215
>gi|289571948|ref|ZP_06452175.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T17]
gi|289545702|gb|EFD49350.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T17]
Length=123
Score = 249 bits (635), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 123/123 (100%), Positives = 123/123 (100%), Gaps = 0/123 (0%)
Query 1 MRIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRP 60
MRIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRP
Sbjct 1 MRIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRP 60
Query 61 FQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAA 120
FQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAA
Sbjct 61 FQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAA 120
Query 121 DRA 123
DRA
Sbjct 121 DRA 123
>gi|169627456|ref|YP_001701105.1| hypothetical protein MAB_0352 [Mycobacterium abscessus ATCC 19977]
gi|169239423|emb|CAM60451.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=212
Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/195 (32%), Positives = 95/195 (49%), Gaps = 15/195 (7%)
Query 24 DAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRPFQAFWVELPACNNWVDIGLPEVY 83
+AH P V+ + ++ IVG + P A V P+C ++ D+GL +V+
Sbjct 22 EAHAIGPEVIGSVLQEPAALSRIVGIELQASRTLKAPSTAVRVSEPSCVDFADVGLSQVF 81
Query 84 DDPD--LASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFHRVVDRTVG------CS 135
+ + L ++ G ++Q SA+D + VKQAVGVF S+ AA VD V C
Sbjct 82 NGNEGTLVAYQGTSSQKSASDARYSVKQAVGVFNSSMAA-------VDPVVALLFMSDCY 134
Query 136 GQTTAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCFVQTRLRENVLLQAKVCQS 195
G + D GTT W+F G S W+ + DR C+++ R R+ V+ Q KVC
Sbjct 135 GHPIKVTDDQGTTDTWTFTQGSSGDGGAGWSMTNSANDRTCYIEMRARQEVMFQVKVCSP 194
Query 196 GNAGPAVNVLAGAMQ 210
+A A +A AM+
Sbjct 195 RDAERAATRIADAME 209
>gi|317506124|ref|ZP_07963948.1| hypothetical protein HMPREF9336_00317 [Segniliparus rugosus ATCC
BAA-974]
gi|316255585|gb|EFV14831.1| hypothetical protein HMPREF9336_00317 [Segniliparus rugosus ATCC
BAA-974]
Length=222
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/160 (36%), Positives = 85/160 (54%), Gaps = 8/160 (5%)
Query 54 EAVFTRPFQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGV 113
E+ F P Q F LPAC + D+G P ++ PDL SF+G+ + + D H+VKQAVGV
Sbjct 40 ESPFDGPRQDFQTSLPACADAADVGTPRIFGRPDLTSFHGSLLRDDSEDGRHIVKQAVGV 99
Query 114 FASNDAADRAFHRVVDRTVGC-SGQTTAIHLDDGTT----QVWSFAGGPSTGTDEAWTKQ 168
F S+ AA A ++ RT C Q+ A DD T+ + W+F + +W K
Sbjct 100 FGSSAAAAAAQGELITRTAACLKAQSLAAREDDTTSGSAGKDWTFVNMNAAADRISWRKV 159
Query 169 EAGTDR-RCFVQTRLRENVLLQAKVCQSG--NAGPAVNVL 205
E + +C + ++ ++N LLQA VC+ GPA +L
Sbjct 160 ENQENGWQCGLVSQAQDNALLQALVCERTPPPKGPATELL 199
>gi|289763884|ref|ZP_06523262.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289711390|gb|EFD75406.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
Length=44
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/44 (100%), Positives = 44/44 (100%), Gaps = 0/44 (0%)
Query 1 MRIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVG 44
MRIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVG
Sbjct 1 MRIAAAVVSIGLAVIAGFAVPVADAHPSEPGVVSYAVLGKGSVG 44
>gi|317506123|ref|ZP_07963947.1| hypothetical protein HMPREF9336_00316 [Segniliparus rugosus ATCC
BAA-974]
gi|316255584|gb|EFV14830.1| hypothetical protein HMPREF9336_00316 [Segniliparus rugosus ATCC
BAA-974]
Length=221
Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/193 (30%), Positives = 83/193 (44%), Gaps = 9/193 (4%)
Query 11 GLAVIAGFAV----PVADAHPSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRPFQAFWV 66
G++V+A + P A A P++P + +L V +VGAP+ E P+Q F
Sbjct 8 GISVLAMLSAVLIAPPAVAEPAKPDDIPRILLSVDEVNTVVGAPVTMENPSDEPYQDFET 67
Query 67 ELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFHR 126
+ PAC DIGLP + L F + + + VKQ VGVF S A A +
Sbjct 68 DTPACAEAADIGLPSTFGGNGLTGFRISLMRDKPEKGGYFVKQVVGVFDSAAEATAAQNA 127
Query 127 VVDRTVGCSGQTTAIHLD----DGTTQVWSFAGGPSTGTDEAWTKQEAGTDR-RCFVQTR 181
V C I + + W+F + G W K E +C +
Sbjct 128 VTSAVRNCLALGKPIEMTFPAGGSDPEHWAFKDLVTAGNGIGWHKDEVQEAHWQCDFASI 187
Query 182 LRENVLLQAKVCQ 194
+R N++LQAKVC+
Sbjct 188 MRNNLVLQAKVCE 200
>gi|317508331|ref|ZP_07966007.1| hypothetical protein HMPREF9336_02379 [Segniliparus rugosus ATCC
BAA-974]
gi|316253371|gb|EFV12765.1| hypothetical protein HMPREF9336_02379 [Segniliparus rugosus ATCC
BAA-974]
Length=252
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (26%), Positives = 85/214 (40%), Gaps = 11/214 (5%)
Query 10 IGLAVIAGFAVPVADAHPSEPGVVSYAVLGKG---------SVGNIVGAPMGWEAVFTRP 60
+G+ V+ G A P P V+ V G+ G ++G +GW T P
Sbjct 38 LGVTVVPGRAAPDPRLLPLASPDVASLVPGRALPSVTVAPDQAGALLGVDLGWSRAVTAP 97
Query 61 FQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAA 120
+ C +G+ Y D A+F+ T Q + D + V AVG++ S A
Sbjct 98 GADSKTTVEECRLADPVGMRAAYGQ-DWAAFSKTTVQPAEDDDSTQVVLAVGLYPSEAKA 156
Query 121 DRAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEAW-TKQEAGTDRRCFVQ 179
AF VV C G++T G +F P+ W +++E RRC
Sbjct 157 RGAFAAVVSALRVCDGKSTTETTAQGAEFALTFHADPTAADALRWRSEREDAGGRRCAYD 216
Query 180 TRLRENVLLQAKVCQSGNAGPAVNVLAGAMQNTL 213
R R N L+ VC +G +A A++ +L
Sbjct 217 ARARRNAFLEVMVCVAGEDAREAKGVADALEGSL 250
>gi|169629506|ref|YP_001703155.1| hypothetical protein MAB_2420c [Mycobacterium abscessus ATCC
19977]
gi|169241473|emb|CAM62501.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=251
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/127 (26%), Positives = 53/127 (42%), Gaps = 8/127 (6%)
Query 87 DLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFHRVVDRTVGCSGQTTAIHLDDG 146
+ ++ GA Q + H+V Q+V +F +A R++ + DD
Sbjct 123 EWTTYRGARQQETEKRYDHIVWQSVVLFPDPKSAASQLQAAYPRSLSSCAGSRQTEGDD- 181
Query 147 TTQVWSFAGGPSTGTDEAWTKQEAGTDR----RCFVQTRLRENVLLQAKVCQSGNAGPAV 202
W + GT WT+QE + RCF R++ N L + +CQ+GN P V
Sbjct 182 ---EWQIGDIVNDGTSVKWTRQETPNGKPSGWRCFYDYRVKNNALFGSLLCQNGNGAPIV 238
Query 203 NVLAGAM 209
+ + M
Sbjct 239 SAIVDRM 245
>gi|256391534|ref|YP_003113098.1| hypothetical protein Caci_2339 [Catenulispora acidiphila DSM
44928]
gi|256357760|gb|ACU71257.1| hypothetical protein Caci_2339 [Catenulispora acidiphila DSM
44928]
Length=268
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/179 (28%), Positives = 73/179 (41%), Gaps = 6/179 (3%)
Query 30 PGVVSYAVLGKGSVGNIVGAPMGWEAVFTRPFQAFWVELPACNNWVDIGLPEVYDDPDLA 89
PG V AVL V VG + V +P A + +C V Y
Sbjct 85 PGTVQAAVLTPDEVSKTVGTTVIAGPVVNQPPAALKADPSSCAVAVGPATASGYTK-GWT 143
Query 90 SFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFHRVVDRTVGCSGQTTAIHLDDGTTQ 149
F T + SA + V Q VGV+ S D A F ++ D C +A D +
Sbjct 144 VFLSTTYEDSAGAGDYTVTQTVGVYGSADQASSMFGKLTDGVKNCP---SATRTDPKQSP 200
Query 150 V-WSFAGGPSTGTDEAWTK-QEAGTDRRCFVQTRLRENVLLQAKVCQSGNAGPAVNVLA 206
V W + G +T AW+ Q+AG C+ Q L+ ++Q +C+SG+ A +A
Sbjct 201 VKWKYTVGKTTADTLAWSAAQDAGGGWACYRQAELKGKDVVQVAICESGDGKAAAGKVA 259
>gi|169629507|ref|YP_001703156.1| hypothetical protein MAB_2421c [Mycobacterium abscessus ATCC
19977]
gi|169241474|emb|CAM62502.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=251
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/191 (25%), Positives = 76/191 (40%), Gaps = 18/191 (9%)
Query 27 PSEPGVVSYAVLGKGSVGNIVGAPMGWEAVFTRPFQAFWVELPACNNWVDIGLPEVYDDP 86
P P + ++ K V +VG+ + +E + P A +C + +P D
Sbjct 63 PISPDTANSLIVPKNDVAELVGSTLDYEGKASNPSSATVEGKESCRA---LMVPLTIDIG 119
Query 87 DL-ASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFHRVV---DRTVGCSGQTTAIH 142
D ++ Q + +HL+ Q V ++ S D A + + RT CSG+ I
Sbjct 120 DKWTTYRNVWYQETKDSFSHLITQRVLLYPSRDDATATYAKEFAADSRT--CSGEDLKID 177
Query 143 LDDGTTQVWSFAGGPSTGTDEAWTKQEA----GTDRRCFVQTRLRENVLLQAKVCQSGNA 198
T W + ++ W E + RC + R +NVL A +CQ GNA
Sbjct 178 -----TATWRASVRDASEDHTRWVLDEIVDGNPSGWRCMAEARAIDNVLFMAMICQRGNA 232
Query 199 GPAVNVLAGAM 209
PAV + M
Sbjct 233 APAVKAIVDRM 243
>gi|169631988|ref|YP_001705637.1| hypothetical protein MAB_4915c [Mycobacterium abscessus ATCC
19977]
gi|169243955|emb|CAM64983.1| Hypothetical protein MAB_4915c [Mycobacterium abscessus]
Length=228
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/151 (30%), Positives = 61/151 (41%), Gaps = 9/151 (5%)
Query 69 PACNNWVDIGLPEV--YDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFHR 126
P+ + L EV Y A G + +T + + V A+ VFA DAA R F
Sbjct 80 PSLECGLGYSLAEVVQYSGYSAARIEGYSQETEEV-REYSVSDALVVFADADAAQREFRS 138
Query 127 VVDRTVGCSGQTTAI--HLDDGTTQVWSFAGGPSTGTDE-AWTKQEAGTDRRCFVQTRLR 183
R C G TT H D W + + DE AWT+ G+ C++ R R
Sbjct 139 FAGRMSKCDGVTTQKRPHED---ADFWKLSITSADTADEVAWTRSVIGSTWACYMAARQR 195
Query 184 ENVLLQAKVCQSGNAGPAVNVLAGAMQNTLG 214
N + + C G+ A +VL MQ G
Sbjct 196 ANFVASSMFCSHGSDNKAGDVLDRLMQKLSG 226
>gi|296394419|ref|YP_003659303.1| hypothetical protein Srot_2016 [Segniliparus rotundus DSM 44985]
gi|296181566|gb|ADG98472.1| hypothetical protein Srot_2016 [Segniliparus rotundus DSM 44985]
Length=252
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/173 (24%), Positives = 65/173 (38%), Gaps = 9/173 (5%)
Query 46 IVGAPMGWEAVFTRPFQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTH 105
+V AP+ W T P C +G Y + + +F T Q + D +
Sbjct 82 LVNAPLAWSRDVTAPGADSKTTANQCLLADPVGTRAAYGE-EWTAFRKTTVQPAEDDDST 140
Query 106 LVKQAVGVFASNDAADRAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEA- 164
+ +VG++ S + +V C G + G +F PS DE
Sbjct 141 QIVMSVGLYPSESKPRGRYVSLVSELRACDGVSATETDAIGAEFPLTFHVEPS---DEEH 197
Query 165 ---WTKQEAGTD-RRCFVQTRLRENVLLQAKVCQSGNAGPAVNVLAGAMQNTL 213
W ++AG R C R+R NV L+ VC + G +A A++ L
Sbjct 198 SIRWRSEKAGAPARSCSYDARVRRNVFLEVMVCAADPQGEGAEPVADALEEAL 250
>gi|317507457|ref|ZP_07965185.1| hypothetical protein HMPREF9336_01557 [Segniliparus rugosus ATCC
BAA-974]
gi|316254238|gb|EFV13580.1| hypothetical protein HMPREF9336_01557 [Segniliparus rugosus ATCC
BAA-974]
Length=218
Score = 41.6 bits (96), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 43/164 (27%), Positives = 65/164 (40%), Gaps = 9/164 (5%)
Query 36 AVLGKGSVGNIVGAPMG---WEAVFTRPFQAFWVELPACNNWVDIGLPEVYDDPDLASFN 92
A+L +G+I+ A + WE T P PAC + VY S+
Sbjct 30 ALLSASELGDILDADLSVQQWE--LTSPNGPSETTPPACRAMSNATTTLVYG-ASWNSYE 86
Query 93 GAT-TQTSATDQTHLVKQAVGVFASNDAADRAFHRVVDRTVGCSGQTTAIHLDDGTTQVW 151
GA+ +D +V Q VGVF + AA F + C +T+ H G W
Sbjct 87 GASYADGEGSDYRTVVGQIVGVFPTQKAASEVFAALAKGLRSCGSKTSVEHRSSGNL-TW 145
Query 152 SFAGGPSTGTDEAW-TKQEAGTDRRCFVQTRLRENVLLQAKVCQ 194
A T +W + RC + RL + V+++A VC+
Sbjct 146 RNAVDEITEGGASWHSILNNKPSWRCSLNARLSDKVMVEASVCR 189
>gi|254774295|ref|ZP_05215811.1| serine/threonine-protein kinase PknE [Mycobacterium avium subsp.
avium ATCC 25291]
Length=604
Score = 41.2 bits (95), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 51/131 (39%), Gaps = 6/131 (4%)
Query 66 VELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFH 125
V +P C + VY ++ NG + + + H V QAV +F S D A
Sbjct 455 VSVPDCQGALYTTQDPVYAGSGYSAVNGLVSSEAGDNYDHWVNQAVVLFPSADKAKSFLQ 514
Query 126 RVVDRTVGCSGQTTAIHLDDGTTQVWSFA---GGPSTGTDEAWTKQEAGTDRRCFVQTRL 182
+ + GC+GQT + + T W+FA G P T QE C +
Sbjct 515 TSLQKWKGCAGQTVTV-TNKSKTYRWTFAQVQGAPPKIT--LMDTQEGADGWECQRALSV 571
Query 183 RENVLLQAKVC 193
NV++ C
Sbjct 572 ANNVIVDINAC 582
>gi|118465657|ref|YP_880659.1| serine/threonine protein kinase [Mycobacterium avium 104]
gi|118166944|gb|ABK67841.1| serine/threonine-protein kinase PknE [Mycobacterium avium 104]
gi|336458610|gb|EGO37577.1| protein kinase family protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=604
Score = 40.8 bits (94), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 50/131 (39%), Gaps = 6/131 (4%)
Query 66 VELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFH 125
V +P C + VY ++ NG + + H V QAV +F S D A
Sbjct 455 VSVPDCQGALYTTQDPVYAGSGYSAVNGLVSSEPGDNYDHWVNQAVVLFPSADKAKSFLQ 514
Query 126 RVVDRTVGCSGQTTAIHLDDGTTQVWSFA---GGPSTGTDEAWTKQEAGTDRRCFVQTRL 182
+ + GC+GQT + + T W+FA G P T QE C +
Sbjct 515 TSLQKWKGCAGQTVTV-TNKSKTYRWTFAQVQGAPPKIT--LMDTQEGADGWECQRALSV 571
Query 183 RENVLLQAKVC 193
NV++ C
Sbjct 572 ANNVIVDINAC 582
>gi|41408603|ref|NP_961439.1| hypothetical protein MAP2505 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41396961|gb|AAS04822.1| hypothetical protein MAP_2505 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=203
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/131 (26%), Positives = 50/131 (39%), Gaps = 6/131 (4%)
Query 66 VELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFH 125
V +P C + VY ++ NG + + H V QAV +F S D A
Sbjct 54 VSVPDCQGALYTTQDPVYAGSGYSAVNGLVSSEPGDNYDHWVNQAVVLFPSADKAKSFLQ 113
Query 126 RVVDRTVGCSGQTTAIHLDDGTTQVWSFA---GGPSTGTDEAWTKQEAGTDRRCFVQTRL 182
+ + GC+GQT + + T W+FA G P T QE C +
Sbjct 114 TSLQKWKGCAGQTVTV-TNKSKTYRWTFAQVQGAPPKIT--LMHTQEGADGWECQRALSV 170
Query 183 RENVLLQAKVC 193
NV++ C
Sbjct 171 ANNVIVDINAC 181
>gi|169629505|ref|YP_001703154.1| hypothetical protein MAB_2419c [Mycobacterium abscessus ATCC
19977]
gi|169241472|emb|CAM62500.1| Hypothetical protein MAB_2419c [Mycobacterium abscessus]
Length=269
Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/156 (25%), Positives = 57/156 (37%), Gaps = 3/156 (1%)
Query 59 RPFQAFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQT-SATDQTHLVKQAVGVFASN 117
+PF A + +CN V GL D +F G A + V QA+ +
Sbjct 113 KPFTATDSDDASCN--VTQGLTVESVGKDYETFRGTEMLLGDAKNPDAQVYQAIAAYGDK 170
Query 118 DAADRAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFAGGPSTGTDEAWTKQEAGTDRRCF 177
+AA F D C G+T DG + + W + RCF
Sbjct 171 NAAQTQFTTASDEVKACDGKTYNFTDPDGNKVPVTVSVALRNTKRVNWALTYGPSKYRCF 230
Query 178 VQTRLRENVLLQAKVCQSGNAGPAVNVLAGAMQNTL 213
V NV++Q +VC N+ V +A + + L
Sbjct 231 VSYNGVANVVVQTQVCARSNSKQLVQKMADRIVDKL 266
>gi|240169452|ref|ZP_04748111.1| serine/threonine-protein kinase PknE [Mycobacterium kansasii
ATCC 12478]
Length=363
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/92 (28%), Positives = 32/92 (35%), Gaps = 0/92 (0%)
Query 63 AFWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADR 122
+ V P C +G VY S + H V QA F S D A R
Sbjct 209 SLKVSNPDCQGAFHVGQGAVYTGSGQTSVRAQVLYELGPAREHFVGQAAVAFPSADEASR 268
Query 123 AFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFA 154
+ C+ QT + L DG T W+ A
Sbjct 269 FVQNSAAKWKNCANQTVTVTLSDGRTSRWTLA 300
>gi|254820140|ref|ZP_05225141.1| serine/threonine-protein kinase PknE [Mycobacterium intracellulare
ATCC 13950]
Length=588
Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/166 (23%), Positives = 62/166 (38%), Gaps = 8/166 (4%)
Query 33 VSYAVLGKGSVGNIVGAP--MGWEAVFTRPFQAFWVELPACNNWVDIGLPEVYDDPDLAS 90
+S +LG + ++G+ + + + A V P C + VY S
Sbjct 404 LSALLLGPSDINTVMGSSTMQPGKPITSTDHSAVTVSTPDCQGALYTTQDPVYAGTGYTS 463
Query 91 FNGATTQTSATDQTHLVKQAVGVFASNDAADRAFHRVVDRTVGCSGQTTAIHLDDGTTQV 150
+G + + H V QAV +F S D A ++ GC+G+T + + T
Sbjct 464 VSGLVSSEPGDNYDHWVNQAVVLFPSADKAKSFLENSAEKWKGCAGKTVTV-TNKSKTYR 522
Query 151 WSFA---GGPSTGTDEAWTKQEAGTDRRCFVQTRLRENVLLQAKVC 193
W+FA G P T QE C + NV++ C
Sbjct 523 WTFAQVQGSPPKIT--LMDTQEGADGWECQRALTVANNVIVDINAC 566
>gi|339297889|gb|AEJ49999.1| putative transmembrane serine/threonine-protein kinase H pknH
[Mycobacterium tuberculosis CCDC5180]
Length=641
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/99 (29%), Positives = 39/99 (40%), Gaps = 4/99 (4%)
Query 66 VELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFH 125
V LP C + VY + NG + + H V QAV F + D A
Sbjct 492 VSLPDCQGALYTSQDPVYAGTGYTAINGLISSEPGDNYEHWVNQAVVAFPTADKARAFVQ 551
Query 126 RVVDRTVGCSGQTTAIHLDDGTTQVWSFA---GGPSTGT 161
D+ C+G+T + + T W+FA G P T T
Sbjct 552 TSADKWKNCAGKTVTV-TNKAKTYRWTFADVKGSPPTIT 589
>gi|121637194|ref|YP_977417.1| putative transmembrane serine/threonine-protein kinase H pknH
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224989669|ref|YP_002644356.1| putative transmembrane serine/threonine-protein kinase H [Mycobacterium
bovis BCG str. Tokyo 172]
gi|121492841|emb|CAL71312.1| Probable transmembrane serine/threonine-protein kinase H pknH
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224772782|dbj|BAH25588.1| putative transmembrane serine/threonine-protein kinase H [Mycobacterium
bovis BCG str. Tokyo 172]
gi|341601212|emb|CCC63885.1| probable transmembrane serine/threonine-protein kinase H pknH
[Mycobacterium bovis BCG str. Moreau RDJ]
Length=596
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/99 (29%), Positives = 39/99 (40%), Gaps = 4/99 (4%)
Query 66 VELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFH 125
V LP C + VY + NG + + H V QAV F + D A
Sbjct 447 VSLPDCQGALYTSQDPVYAGTGYTAINGLISSEPGDNYEHWVNQAVVAFPTADKARAFVQ 506
Query 126 RVVDRTVGCSGQTTAIHLDDGTTQVWSFA---GGPSTGT 161
D+ C+G+T + + T W+FA G P T T
Sbjct 507 TSADKWKNCAGKTVTV-TNKAKTYRWTFADVKGSPPTIT 544
>gi|289554945|ref|ZP_06444155.1| transmembrane serine/threonine-protein kinase H pknH [Mycobacterium
tuberculosis KZN 605]
gi|289439577|gb|EFD22070.1| transmembrane serine/threonine-protein kinase H pknH [Mycobacterium
tuberculosis KZN 605]
Length=615
Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/99 (29%), Positives = 39/99 (40%), Gaps = 4/99 (4%)
Query 66 VELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFH 125
V LP C + VY + NG + + H V QAV F + D A
Sbjct 466 VSLPDCQGALYTSQDPVYAGTGYTAINGLISSEPGDNYEHWVNQAVVAFPTADKARAFVQ 525
Query 126 RVVDRTVGCSGQTTAIHLDDGTTQVWSFA---GGPSTGT 161
D+ C+G+T + + T W+FA G P T T
Sbjct 526 TSADKWKNCAGKTVTV-TNKAKTYRWTFADVKGSPPTIT 563
>gi|339294249|gb|AEJ46360.1| transmembrane serine/threonine-protein kinase H pknH [Mycobacterium
tuberculosis CCDC5079]
Length=638
Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/99 (29%), Positives = 39/99 (40%), Gaps = 4/99 (4%)
Query 66 VELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFH 125
V LP C + VY + NG + + H V QAV F + D A
Sbjct 489 VSLPDCQGALYTSQDPVYAGTGYTAINGLISSEPGDNYEHWVNQAVVAFPTADKARAFVQ 548
Query 126 RVVDRTVGCSGQTTAIHLDDGTTQVWSFA---GGPSTGT 161
D+ C+G+T + + T W+FA G P T T
Sbjct 549 TSADKWKNCAGKTVTV-TNKAKTYRWTFADVKGSPPTIT 586
>gi|307083826|ref|ZP_07492939.1| hypothetical protein TMLG_02601 [Mycobacterium tuberculosis SUMu012]
gi|308366543|gb|EFP55394.1| hypothetical protein TMLG_02601 [Mycobacterium tuberculosis SUMu012]
Length=222
Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/99 (29%), Positives = 39/99 (40%), Gaps = 4/99 (4%)
Query 66 VELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFH 125
V LP C + VY + NG + + H V QAV F + D A
Sbjct 73 VSLPDCQGALYTSQDPVYAGTGYTAINGLISSEPGDNYEHWVNQAVVAFPTADKARAFVQ 132
Query 126 RVVDRTVGCSGQTTAIHLDDGTTQVWSFA---GGPSTGT 161
D+ C+G+T + + T W+FA G P T T
Sbjct 133 TSADKWKNCAGKTVTV-TNKAKTYRWTFADVKGSPPTIT 170
>gi|296170175|ref|ZP_06851770.1| non-specific serine/threonine protein kinase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895167|gb|EFG74883.1| non-specific serine/threonine protein kinase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=625
Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/143 (25%), Positives = 52/143 (37%), Gaps = 11/143 (7%)
Query 59 RPFQA-----FWVELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGV 113
+P QA V P C + VY ++ +G + + H V QAV +
Sbjct 464 KPIQAMDTSSLTVSQPDCQGALYTTQSTVYAGTGFSAVSGLVSSEPGDNYDHWVNQAVVL 523
Query 114 FASNDAADRAFHRVVDRTVGCSGQTTAIHLDDGTTQVWSFA---GGPSTGTDEAWTKQEA 170
F S D A + GC+G+T + + G T W+F GGP QE
Sbjct 524 FPSADKAKDFLQTSAGKWKGCAGKTVTV-TNKGKTYRWTFEQVQGGPPKIA--VLDTQEG 580
Query 171 GTDRRCFVQTRLRENVLLQAKVC 193
C + NV++ C
Sbjct 581 ADGWECQRAMSVANNVIVDVNAC 603
>gi|15608406|ref|NP_215782.1| transmembrane serine/threonine-protein kinase H [Mycobacterium
tuberculosis H37Rv]
gi|6093725|sp|Q11053.2|PKNH_MYCTU RecName: Full=Probable serine/threonine-protein kinase pknH
gi|3261596|emb|CAB00914.1| PROBABLE TRANSMEMBRANE SERINE/THREONINE-PROTEIN KINASE H PKNH
(PROTEIN KINASE H) (STPK H) [Mycobacterium tuberculosis H37Rv]
Length=626
Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/99 (29%), Positives = 39/99 (40%), Gaps = 4/99 (4%)
Query 66 VELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFH 125
V LP C + VY + NG + + H V QAV F + D A
Sbjct 477 VSLPDCQGALYTSQDPVYAGTGYTAINGLISSEPGDNYEHWVNQAVVAFPTADKARAFVQ 536
Query 126 RVVDRTVGCSGQTTAIHLDDGTTQVWSFA---GGPSTGT 161
D+ C+G+T + + T W+FA G P T T
Sbjct 537 TSADKWKNCAGKTVTV-TNKAKTYRWTFADVKGSPPTIT 574
>gi|289757364|ref|ZP_06516742.1| transmembrane serine/threonine-protein kinase H [Mycobacterium
tuberculosis T85]
gi|289712928|gb|EFD76940.1| transmembrane serine/threonine-protein kinase H [Mycobacterium
tuberculosis T85]
Length=210
Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/99 (29%), Positives = 39/99 (40%), Gaps = 4/99 (4%)
Query 66 VELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFH 125
V LP C + VY + NG + + H V QAV F + D A
Sbjct 61 VSLPDCQGALYTSQDPVYAGTGYTAINGLISSEPGDNYEHWVNQAVVAFPTADKARAFVQ 120
Query 126 RVVDRTVGCSGQTTAIHLDDGTTQVWSFA---GGPSTGT 161
D+ C+G+T + + T W+FA G P T T
Sbjct 121 TSADKWKNCAGKTVTV-TNKAKTYRWTFADVKGSPPTIT 158
>gi|289573926|ref|ZP_06454153.1| transmembrane serine/threonine-protein kinase H pknH [Mycobacterium
tuberculosis K85]
gi|339631332|ref|YP_004722974.1| Ser/Thr protein kinase [Mycobacterium africanum GM041182]
gi|289538357|gb|EFD42935.1| transmembrane serine/threonine-protein kinase H pknH [Mycobacterium
tuberculosis K85]
gi|339330688|emb|CCC26357.1| putative membrane spanning serine/threonine protein kinase [Mycobacterium
africanum GM041182]
Length=626
Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/99 (29%), Positives = 39/99 (40%), Gaps = 4/99 (4%)
Query 66 VELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFH 125
V LP C + VY + NG + + H V QAV F + D A
Sbjct 477 VSLPDCQGALYTSQDPVYAGTGYTAINGLISSEPGDNYEHWVNQAVVAFPTADKARAFVQ 536
Query 126 RVVDRTVGCSGQTTAIHLDDGTTQVWSFA---GGPSTGT 161
D+ C+G+T + + T W+FA G P T T
Sbjct 537 TSADKWKNCAGKTVTV-TNKAKTYRWTFADVKGSPPTIT 574
>gi|15840712|ref|NP_335749.1| serine/threonine protein kinase [Mycobacterium tuberculosis CDC1551]
gi|148661053|ref|YP_001282576.1| serine/threonine protein kinase [Mycobacterium tuberculosis H37Ra]
gi|148822483|ref|YP_001287237.1| transmembrane serine/threonine-protein kinase H pknH [Mycobacterium
tuberculosis F11]
48 more sequence titles
Length=626
Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/99 (29%), Positives = 39/99 (40%), Gaps = 4/99 (4%)
Query 66 VELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFH 125
V LP C + VY + NG + + H V QAV F + D A
Sbjct 477 VSLPDCQGALYTSQDPVYAGTGYTAINGLISSEPGDNYEHWVNQAVVAFPTADKARAFVQ 536
Query 126 RVVDRTVGCSGQTTAIHLDDGTTQVWSFA---GGPSTGT 161
D+ C+G+T + + T W+FA G P T T
Sbjct 537 TSADKWKNCAGKTVTV-TNKAKTYRWTFADVKGSPPTIT 574
>gi|31792458|ref|NP_854951.1| transmembrane serine/threonine-protein kinase H [Mycobacterium
bovis AF2122/97]
gi|61214289|sp|Q7U095.1|PKNH_MYCBO RecName: Full=Probable serine/threonine-protein kinase pknH
gi|31618047|emb|CAD94158.1| PROBABLE TRANSMEMBRANE SERINE/THREONINE-PROTEIN KINASE H PKNH
(PROTEIN KINASE H) (STPK H) [Mycobacterium bovis AF2122/97]
Length=596
Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/99 (29%), Positives = 39/99 (40%), Gaps = 4/99 (4%)
Query 66 VELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFH 125
V LP C + VY + NG + + H V QAV F + D A
Sbjct 447 VSLPDCQGALYTSQDPVYAGTGYTAINGLISSEPGDNYEHWVNQAVVAFPTADKARAFVQ 506
Query 126 RVVDRTVGCSGQTTAIHLDDGTTQVWSFA---GGPSTGT 161
D+ C+G+T + + T W+FA G P T T
Sbjct 507 TSADKWKNCAGKTVTV-TNKAKTYRWTFADVKGSPPTIT 544
>gi|340626279|ref|YP_004744731.1| putative transmembrane serine/threonine-protein kinase H [Mycobacterium
canettii CIPT 140010059]
gi|340004469|emb|CCC43612.1| putative transmembrane serine/threonine-protein kinase H PKNH
(protein kinase H) (STPK H) [Mycobacterium canettii CIPT 140010059]
Length=626
Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/99 (29%), Positives = 39/99 (40%), Gaps = 4/99 (4%)
Query 66 VELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFH 125
V LP C + VY + NG + + H V QAV F + D A
Sbjct 477 VSLPDCQGALYTSQDPVYAGTGYTAINGLISSEPGDNYEHWVNQAVVAFPTADKARAFVQ 536
Query 126 RVVDRTVGCSGQTTAIHLDDGTTQVWSFA---GGPSTGT 161
D+ C+G+T + + T W+FA G P T T
Sbjct 537 TSADKWKNCAGKTVTV-TNKAKTYRWTFADVKGSPPTIT 574
>gi|289446857|ref|ZP_06436601.1| transmembrane serine/threonine-protein kinase H pknH [Mycobacterium
tuberculosis CPHL_A]
gi|289419815|gb|EFD17016.1| transmembrane serine/threonine-protein kinase H pknH [Mycobacterium
tuberculosis CPHL_A]
Length=626
Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/99 (29%), Positives = 39/99 (40%), Gaps = 4/99 (4%)
Query 66 VELPACNNWVDIGLPEVYDDPDLASFNGATTQTSATDQTHLVKQAVGVFASNDAADRAFH 125
V LP C + VY + NG + + H V QAV F + D A
Sbjct 477 VSLPDCQGALYTSQDPVYAGTGYTAINGLISSEPGDNYEHWVNQAVVAFPTADKARAFVQ 536
Query 126 RVVDRTVGCSGQTTAIHLDDGTTQVWSFA---GGPSTGT 161
D+ C+G+T + + T W+FA G P T T
Sbjct 537 TSADKWKNCAGKTVTV-TNKAKTYRWTFADVKGSPPTIT 574
Lambda K H
0.318 0.132 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 254328062080
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40