BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3712 Length=413 Score E Sequences producing significant alignments: (Bits) Value gi|15610848|ref|NP_218229.1| ligase [Mycobacterium tuberculosis ... 817 0.0 gi|289572363|ref|ZP_06452590.1| ligase [Mycobacterium tuberculos... 813 0.0 gi|31794884|ref|NP_857377.1| ligase [Mycobacterium bovis AF2122/... 811 0.0 gi|298527189|ref|ZP_07014598.1| LOW QUALITY PROTEIN: ligase [Myc... 811 0.0 gi|340628686|ref|YP_004747138.1| putative ligase [Mycobacterium ... 804 0.0 gi|289571956|ref|ZP_06452183.1| ligase [Mycobacterium tuberculos... 729 0.0 gi|296166806|ref|ZP_06849224.1| murein peptide ligase [Mycobacte... 689 0.0 gi|254233207|ref|ZP_04926533.1| hypothetical protein TBCG_03637 ... 679 0.0 gi|254818512|ref|ZP_05223513.1| ligase [Mycobacterium intracellu... 675 0.0 gi|254773394|ref|ZP_05214910.1| mur ligase family protein [Mycob... 667 0.0 gi|118465123|ref|YP_879675.1| mur ligase [Mycobacterium avium 10... 664 0.0 gi|336460774|gb|EGO39660.1| UDP-N-acetylmuramyl tripeptide synth... 664 0.0 gi|126437832|ref|YP_001073523.1| hypothetical protein Mjls_5269 ... 657 0.0 gi|342861921|ref|ZP_08718565.1| UDP-N-acetylmuramyl tripeptide s... 656 0.0 gi|333992635|ref|YP_004525249.1| UDP-N-acetylmuramyl tripeptide ... 654 0.0 gi|108801864|ref|YP_642061.1| hypothetical protein Mmcs_4901 [My... 652 0.0 gi|15828250|ref|NP_302513.1| ligase [Mycobacterium leprae TN] >g... 632 4e-179 gi|240173341|ref|ZP_04751999.1| ligase [Mycobacterium kansasii A... 631 6e-179 gi|120406463|ref|YP_956292.1| hypothetical protein Mvan_5520 [My... 619 4e-175 gi|183985198|ref|YP_001853489.1| UDP-N-acetylmuramyl tripeptide ... 617 9e-175 gi|118619458|ref|YP_907790.1| UDP-N-acetylmuramyl tripeptide syn... 613 1e-173 gi|118473806|ref|YP_890495.1| mur ligase [Mycobacterium smegmati... 613 2e-173 gi|145221883|ref|YP_001132561.1| hypothetical protein Mflv_1291 ... 607 9e-172 gi|169627428|ref|YP_001701077.1| putative Mur ligase family prot... 583 2e-164 gi|312137906|ref|YP_004005242.1| murein ligase [Rhodococcus equi... 558 4e-157 gi|333917904|ref|YP_004491485.1| Murein peptide ligase [Amycolic... 553 1e-155 gi|229492120|ref|ZP_04385929.1| mur ligase family protein [Rhodo... 549 3e-154 gi|226303896|ref|YP_002763854.1| hypothetical protein RER_04070 ... 549 4e-154 gi|54022266|ref|YP_116508.1| hypothetical protein nfa3020 [Nocar... 545 4e-153 gi|343926409|ref|ZP_08765914.1| hypothetical protein GOALK_060_0... 527 1e-147 gi|111021195|ref|YP_704167.1| UDP-N-acetylmuramoylalanine--D-glu... 521 7e-146 gi|296141669|ref|YP_003648912.1| hypothetical protein Tpau_4002 ... 519 3e-145 gi|262200461|ref|YP_003271669.1| hypothetical protein Gbro_0442 ... 518 8e-145 gi|326383520|ref|ZP_08205206.1| hypothetical protein SCNU_11305 ... 517 1e-144 gi|226363555|ref|YP_002781337.1| hypothetical protein ROP_41450 ... 517 1e-144 gi|319950860|ref|ZP_08024743.1| hypothetical protein ES5_14668 [... 479 4e-133 gi|300780021|ref|ZP_07089877.1| murein peptide ligase [Corynebac... 451 1e-124 gi|38232886|ref|NP_938653.1| hypothetical protein DIP0263 [Coryn... 451 2e-124 gi|334564145|ref|ZP_08517136.1| putative UDP-N-acetylmuramyl tri... 447 1e-123 gi|336326611|ref|YP_004606577.1| UDP-N-acetylmuramate-L-alanine ... 444 1e-122 gi|296118027|ref|ZP_06836609.1| mur ligase family protein [Coryn... 439 4e-121 gi|25026769|ref|NP_736823.1| hypothetical protein CE0213 [Coryne... 437 1e-120 gi|296395022|ref|YP_003659906.1| hypothetical protein Srot_2641 ... 432 5e-119 gi|227542722|ref|ZP_03972771.1| possible UDP-N-acetylmuramoylala... 432 8e-119 gi|227549655|ref|ZP_03979704.1| possible UDP-N-acetylmuramoylala... 431 1e-118 gi|227487301|ref|ZP_03917617.1| possible UDP-N-acetylmuramoylala... 430 2e-118 gi|225020188|ref|ZP_03709380.1| hypothetical protein CORMATOL_00... 430 2e-118 gi|68537102|ref|YP_251807.1| putative UDP-N-acetylmuramyl tripep... 429 4e-118 gi|305680073|ref|ZP_07402883.1| Mur ligase middle domain protein... 429 5e-118 gi|300857573|ref|YP_003782556.1| hypothetical protein cpfrc_0015... 428 7e-118 >gi|15610848|ref|NP_218229.1| ligase [Mycobacterium tuberculosis H37Rv] gi|15843333|ref|NP_338370.1| mur ligase family protein [Mycobacterium tuberculosis CDC1551] gi|148663577|ref|YP_001285100.1| putative ligase [Mycobacterium tuberculosis H37Ra] 55 more sequence titles Length=413 Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/413 (99%), Positives = 413/413 (100%), Gaps = 0/413 (0%) Query 1 VVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 +VTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN Sbjct 1 MVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 Query 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA Sbjct 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 Query 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV 180 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV Sbjct 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV 180 Query 181 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG 240 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG Sbjct 181 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG 240 Query 241 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR 300 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR Sbjct 241 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR 300 Query 301 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGER 360 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGER Sbjct 301 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGER 360 Query 361 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 413 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG Sbjct 361 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 413 >gi|289572363|ref|ZP_06452590.1| ligase [Mycobacterium tuberculosis K85] gi|339633704|ref|YP_004725346.1| ligase [Mycobacterium africanum GM041182] gi|289536794|gb|EFD41372.1| ligase [Mycobacterium tuberculosis K85] gi|339333060|emb|CCC28790.1| putative ligase [Mycobacterium africanum GM041182] Length=413 Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/413 (99%), Positives = 412/413 (99%), Gaps = 0/413 (0%) Query 1 VVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 +VTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN Sbjct 1 MVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 Query 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA Sbjct 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 Query 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV 180 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV Sbjct 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV 180 Query 181 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG 240 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG Sbjct 181 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG 240 Query 241 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR 300 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR Sbjct 241 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR 300 Query 301 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGER 360 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFE TRVVAAGER Sbjct 301 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFETTRVVAAGER 360 Query 361 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 413 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG Sbjct 361 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 413 >gi|31794884|ref|NP_857377.1| ligase [Mycobacterium bovis AF2122/97] gi|121639628|ref|YP_979852.1| putative ligase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224992124|ref|YP_002646813.1| putative ligase [Mycobacterium bovis BCG str. Tokyo 172] gi|31620482|emb|CAD95925.1| POSSIBLE LIGASE [Mycobacterium bovis AF2122/97] gi|121495276|emb|CAL73762.1| Possible ligase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224775239|dbj|BAH28045.1| putative ligase [Mycobacterium bovis BCG str. Tokyo 172] gi|341603649|emb|CCC66330.1| possible ligase [Mycobacterium bovis BCG str. Moreau RDJ] Length=413 Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/413 (99%), Positives = 411/413 (99%), Gaps = 0/413 (0%) Query 1 VVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 +VTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN Sbjct 1 MVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 Query 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA Sbjct 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 Query 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV 180 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV Sbjct 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV 180 Query 181 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG 240 VWVAAGGAWSNDSVSCPRS EVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG Sbjct 181 VWVAAGGAWSNDSVSCPRSSEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG 240 Query 241 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR 300 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR Sbjct 241 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR 300 Query 301 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGER 360 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFE TRVVAAGER Sbjct 301 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFETTRVVAAGER 360 Query 361 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 413 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG Sbjct 361 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 413 >gi|298527189|ref|ZP_07014598.1| LOW QUALITY PROTEIN: ligase [Mycobacterium tuberculosis 94_M4241A] gi|298496983|gb|EFI32277.1| LOW QUALITY PROTEIN: ligase [Mycobacterium tuberculosis 94_M4241A] Length=414 Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/411 (99%), Positives = 411/411 (100%), Gaps = 0/411 (0%) Query 1 VVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 +VTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN Sbjct 1 MVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 Query 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA Sbjct 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 Query 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV 180 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV Sbjct 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV 180 Query 181 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG 240 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG Sbjct 181 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG 240 Query 241 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR 300 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR Sbjct 241 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR 300 Query 301 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGER 360 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGER Sbjct 301 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGER 360 Query 361 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALAR 411 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALAR Sbjct 361 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALAR 411 >gi|340628686|ref|YP_004747138.1| putative ligase [Mycobacterium canettii CIPT 140010059] gi|340006876|emb|CCC46065.1| putative ligase [Mycobacterium canettii CIPT 140010059] Length=413 Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/413 (99%), Positives = 409/413 (99%), Gaps = 0/413 (0%) Query 1 VVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 +VTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN Sbjct 1 MVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 Query 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISD+ Sbjct 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDS 120 Query 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV 180 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV Sbjct 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV 180 Query 181 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG 240 VWVAAGGAWSNDSVSCPRSGEVIVR APSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG Sbjct 181 VWVAAGGAWSNDSVSCPRSGEVIVRNAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG 240 Query 241 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR 300 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAV QVDEVAGRYRTVRIGAHQAR Sbjct 241 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVYQVDEVAGRYRTVRIGAHQAR 300 Query 301 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGER 360 ILLAKNPAGWQEALAMVD HA GVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGER Sbjct 301 ILLAKNPAGWQEALAMVDTHAAGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGER 360 Query 361 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 413 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG Sbjct 361 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 413 >gi|289571956|ref|ZP_06452183.1| ligase [Mycobacterium tuberculosis T17] gi|289545710|gb|EFD49358.1| ligase [Mycobacterium tuberculosis T17] Length=365 Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/365 (100%), Positives = 365/365 (100%), Gaps = 0/365 (0%) Query 49 MGRRTVVVTGTNGKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLE 108 MGRRTVVVTGTNGKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLE Sbjct 1 MGRRTVVVTGTNGKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLE 60 Query 109 VDEMHVPHISDAVDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDV 168 VDEMHVPHISDAVDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDV Sbjct 61 VDEMHVPHISDAVDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDV 120 Query 169 LMTSAAYDSPNVVWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHW 228 LMTSAAYDSPNVVWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHW Sbjct 121 LMTSAAYDSPNVVWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHW 180 Query 229 WFDDATLYGPDGLALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGR 288 WFDDATLYGPDGLALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGR Sbjct 181 WFDDATLYGPDGLALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGR 240 Query 289 YRTVRIGAHQARILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEH 348 YRTVRIGAHQARILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEH Sbjct 241 YRTVRIGAHQARILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEH 300 Query 349 FEKTRVVAAGERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRA 408 FEKTRVVAAGERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRA Sbjct 301 FEKTRVVAAGERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRA 360 Query 409 LARRG 413 LARRG Sbjct 361 LARRG 365 >gi|296166806|ref|ZP_06849224.1| murein peptide ligase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897822|gb|EFG77410.1| murein peptide ligase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=409 Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/413 (89%), Positives = 390/413 (95%), Gaps = 4/413 (0%) Query 1 VVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 ++TTRARLALAAGA ARWASRVTGRGAGAMIGGLVAMTLDRS+LRQLG GRRTV+VTGTN Sbjct 1 MITTRARLALAAGASARWASRVTGRGAGAMIGGLVAMTLDRSVLRQLGTGRRTVIVTGTN 60 Query 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 GKSTTTRMTAAALGTLG VATNAEGANMDAGLVAALAA R+A LA LEVDEMHVPH++DA Sbjct 61 GKSTTTRMTAAALGTLGPVATNAEGANMDAGLVAALAADREARLAALEVDEMHVPHVADA 120 Query 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV 180 V+P+V+VLLNLSRDQLDRVGEINVIERTLRAGLARHP AVVVANCDDVLMTSAAYDSP+V Sbjct 121 VEPSVIVLLNLSRDQLDRVGEINVIERTLRAGLARHPGAVVVANCDDVLMTSAAYDSPDV 180 Query 181 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG 240 VWVAAGGAW+NDSVSCPRSGEVIVR + HWYSTGADFKRP+P WWFDD TLYGPDG Sbjct 181 VWVAAGGAWANDSVSCPRSGEVIVR----DQGHWYSTGADFKRPSPQWWFDDETLYGPDG 236 Query 241 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR 300 LA+PMRLALPG+VNRGNAAQAVAAAVALGADPA AVAAV VDEVAGRYR+VR+G H+AR Sbjct 237 LAVPMRLALPGAVNRGNAAQAVAAAVALGADPARAVAAVSNVDEVAGRYRSVRVGDHEAR 296 Query 301 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGER 360 ILLAKNPAGWQEAL+MVDKHA GVVI+VNG+VPDGEDLSWLWDVRFEHFE T VVAAGER Sbjct 297 ILLAKNPAGWQEALSMVDKHAAGVVISVNGQVPDGEDLSWLWDVRFEHFENTAVVAAGER 356 Query 361 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 413 GTDLAVRLGYAGV+HTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALAR G Sbjct 357 GTDLAVRLGYAGVDHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARHG 409 >gi|254233207|ref|ZP_04926533.1| hypothetical protein TBCG_03637 [Mycobacterium tuberculosis C] gi|124603000|gb|EAY61275.1| hypothetical protein TBCG_03637 [Mycobacterium tuberculosis C] Length=414 Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/417 (92%), Positives = 386/417 (93%), Gaps = 7/417 (1%) Query 1 VVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 +VTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN Sbjct 1 MVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 Query 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA Sbjct 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 Query 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVAN----CDDVLMTSAAYD 176 VDPAVVVLLNLSRDQLDRVGEINVIERTLRA P DD+ + A Sbjct 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRARAGPAPRRCRGRQLRRRADDLGRPTTA-- 178 Query 177 SPNVVWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLY 236 P GGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLY Sbjct 179 -PTSFGWLPGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLY 237 Query 237 GPDGLALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGA 296 GPDGLALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGA Sbjct 238 GPDGLALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGA 297 Query 297 HQARILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVA 356 HQARILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVA Sbjct 298 HQARILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVA 357 Query 357 AGERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 413 AGERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG Sbjct 358 AGERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 414 >gi|254818512|ref|ZP_05223513.1| ligase [Mycobacterium intracellulare ATCC 13950] Length=409 Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/413 (89%), Positives = 388/413 (94%), Gaps = 4/413 (0%) Query 1 VVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 +VTTRARLALAAGA ARWASRVTGRGAGAMIGGL+AMTLDRS+LRQL GRRTVVVTGTN Sbjct 1 MVTTRARLALAAGASARWASRVTGRGAGAMIGGLIAMTLDRSVLRQLAAGRRTVVVTGTN 60 Query 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 GKSTTTRMT+AAL TLG VATNAEGANMDAGLVAALAA+R A LA LEVDEMHVPH+SDA Sbjct 61 GKSTTTRMTSAALATLGPVATNAEGANMDAGLVAALAANRQASLAALEVDEMHVPHVSDA 120 Query 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV 180 V+P+VVVLLNLSRDQLDRVGEINVIERTLRAGLARHP+AVVVANCDDVLMTSAAYDSPNV Sbjct 121 VEPSVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPNAVVVANCDDVLMTSAAYDSPNV 180 Query 181 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG 240 VWVAAGG+WSNDSVSCPRSGEVIVR + HW+STGADFKRP+P WWFDD TL+GPDG Sbjct 181 VWVAAGGSWSNDSVSCPRSGEVIVR----ERGHWFSTGADFKRPSPQWWFDDHTLHGPDG 236 Query 241 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR 300 L+LPMRL LPG+VNRGNAAQAVAAAVALGADPA AVAAV VDEVAGRYRTVR+G H+ R Sbjct 237 LSLPMRLTLPGAVNRGNAAQAVAAAVALGADPAAAVAAVSSVDEVAGRYRTVRVGEHEVR 296 Query 301 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGER 360 +LLAKNPAGWQEAL+MVDK A GVVI+VNG+VPDGEDLSWLWDVRFEHFE+T VVAAGER Sbjct 297 MLLAKNPAGWQEALSMVDKRAAGVVISVNGQVPDGEDLSWLWDVRFEHFEQTEVVAAGER 356 Query 361 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 413 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG Sbjct 357 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 409 >gi|254773394|ref|ZP_05214910.1| mur ligase family protein [Mycobacterium avium subsp. avium ATCC 25291] Length=416 Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/403 (87%), Positives = 366/403 (91%), Gaps = 11/403 (2%) Query 18 WASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLG 77 WASRVTGRGAGAMIGGLVAMTLDRS+LRQL GRRTVVVTGTNGKSTTTRMTAAAL T+G Sbjct 18 WASRVTGRGAGAMIGGLVAMTLDRSVLRQLATGRRTVVVTGTNGKSTTTRMTAAALATMG 77 Query 78 AVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLD 137 +VATNAEGANMDAGLVAALAA+R A LA LEVDEMHVPH+SDAV P VVVLLNLSRDQLD Sbjct 78 SVATNAEGANMDAGLVAALAANRGARLAALEVDEMHVPHVSDAVRPGVVVLLNLSRDQLD 137 Query 138 RVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCP 197 RVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVAAGG+W+NDSVSCP Sbjct 138 RVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVAAGGSWANDSVSCP 197 Query 198 RSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDD---ATLYGPDGLALPMRLALPGSVN 254 RSGEVIVR ++ HWYSTGADFKRP+PHWWFD LYGP G+ALPMRLALPG+VN Sbjct 198 RSGEVIVR----EQGHWYSTGADFKRPSPHWWFDPQDGGNLYGPGGVALPMRLALPGAVN 253 Query 255 RGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEAL 314 RGNAAQAVAAAVALGADPA AV AV VDEVAGRYRTVR+G H R+LLAKNPAGWQEAL Sbjct 254 RGNAAQAVAAAVALGADPAAAVTAVSTVDEVAGRYRTVRVGGHDVRMLLAKNPAGWQEAL 313 Query 315 AMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEH----FEKTRVVAAGERGTDLAVRLGY 370 +MVD HADGVVI+VNGRVPDGEDLSWLWDVRFEH F+ T VVAAGERGTDLAVRLGY Sbjct 314 SMVDPHADGVVISVNGRVPDGEDLSWLWDVRFEHFNDAFQTTPVVAAGERGTDLAVRLGY 373 Query 371 AGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 413 AGVEHTLVHDTVAAI SCPPGRVEVVANYTAFL LQRALAR G Sbjct 374 AGVEHTLVHDTVAAIESCPPGRVEVVANYTAFLALQRALARHG 416 >gi|118465123|ref|YP_879675.1| mur ligase [Mycobacterium avium 104] gi|118166410|gb|ABK67307.1| mur ligase family protein [Mycobacterium avium 104] Length=416 Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/403 (87%), Positives = 366/403 (91%), Gaps = 11/403 (2%) Query 18 WASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLG 77 WASRVTGRGAGAMIGGLVAMTLDRS+LRQL GRRTVVVTGTNGKSTTTRMTAAAL T+G Sbjct 18 WASRVTGRGAGAMIGGLVAMTLDRSVLRQLATGRRTVVVTGTNGKSTTTRMTAAALATMG 77 Query 78 AVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLD 137 +VATNAEGANMDAGLVAALAA+R A LA LEVDEMHVPH+SDAV P VVVLLNLSRDQLD Sbjct 78 SVATNAEGANMDAGLVAALAANRGARLAALEVDEMHVPHVSDAVRPGVVVLLNLSRDQLD 137 Query 138 RVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCP 197 RVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSP+VVWVAAGG+W+NDSVSCP Sbjct 138 RVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPHVVWVAAGGSWANDSVSCP 197 Query 198 RSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDD---ATLYGPDGLALPMRLALPGSVN 254 RSGEVIVR ++ HWYSTGADFKRP+PHWWFD LYGP G+ALPMRLALPG+VN Sbjct 198 RSGEVIVR----EQGHWYSTGADFKRPSPHWWFDPQDGGNLYGPGGVALPMRLALPGAVN 253 Query 255 RGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEAL 314 RGNAAQAVAAAVALGADPA AV AV VDEVAGRYRTVR+G H R+LLAKNPAGWQEAL Sbjct 254 RGNAAQAVAAAVALGADPAAAVTAVSTVDEVAGRYRTVRVGRHDVRMLLAKNPAGWQEAL 313 Query 315 AMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEH----FEKTRVVAAGERGTDLAVRLGY 370 +MVD HADGVVI+VNGRVPDGEDLSWLWDVRFEH F+ T VVAAGERGTDLAVRLGY Sbjct 314 SMVDPHADGVVISVNGRVPDGEDLSWLWDVRFEHFNDAFQTTPVVAAGERGTDLAVRLGY 373 Query 371 AGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 413 AGVEHTLVHDTVAAI SCPPGRVEVVANYTAFL LQRALAR G Sbjct 374 AGVEHTLVHDTVAAIESCPPGRVEVVANYTAFLALQRALARHG 416 >gi|336460774|gb|EGO39660.1| UDP-N-acetylmuramyl tripeptide synthase [Mycobacterium avium subsp. paratuberculosis S397] Length=416 Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/403 (87%), Positives = 366/403 (91%), Gaps = 11/403 (2%) Query 18 WASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLG 77 WASRVTGRGAGAMIGGLVAMTLDRS+LRQL GRRTVVVTGTNGKSTTTRMTAAAL T+G Sbjct 18 WASRVTGRGAGAMIGGLVAMTLDRSVLRQLATGRRTVVVTGTNGKSTTTRMTAAALATMG 77 Query 78 AVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLD 137 +VATNAEGANMDAGLVAALAA+R A LA LEVDEMHVPH+SDAV P VVVLLNLSRDQLD Sbjct 78 SVATNAEGANMDAGLVAALAANRGARLAALEVDEMHVPHVSDAVRPGVVVLLNLSRDQLD 137 Query 138 RVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCP 197 RVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSP+VVWVAAGG+W+NDSVSCP Sbjct 138 RVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPHVVWVAAGGSWANDSVSCP 197 Query 198 RSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDD---ATLYGPDGLALPMRLALPGSVN 254 RSGEVIVR ++ HWYSTGADFKRP+PHWWFD LYGP G+ALPMRLALPG+VN Sbjct 198 RSGEVIVR----EQGHWYSTGADFKRPSPHWWFDPQDGGNLYGPGGVALPMRLALPGAVN 253 Query 255 RGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEAL 314 RGNAAQAVAAAVALGADPA AV AV VDEVAGRYRTVR+G H R+LLAKNPAGWQEAL Sbjct 254 RGNAAQAVAAAVALGADPAAAVTAVSTVDEVAGRYRTVRVGGHDVRMLLAKNPAGWQEAL 313 Query 315 AMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEH----FEKTRVVAAGERGTDLAVRLGY 370 +MVD HADGVVI+VNGRVPDGEDLSWLWDVRFEH F+ T VVAAGERGTDLAVRLGY Sbjct 314 SMVDPHADGVVISVNGRVPDGEDLSWLWDVRFEHFNDAFQTTPVVAAGERGTDLAVRLGY 373 Query 371 AGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 413 AGVEHTLVHDTVAAI SCPPGRVEVVANYTAFL LQRA+AR G Sbjct 374 AGVEHTLVHDTVAAIESCPPGRVEVVANYTAFLALQRAVARHG 416 >gi|126437832|ref|YP_001073523.1| hypothetical protein Mjls_5269 [Mycobacterium sp. JLS] gi|126237632|gb|ABO01033.1| domain of unknown function DUF1727 [Mycobacterium sp. JLS] Length=408 Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/409 (86%), Positives = 367/409 (90%), Gaps = 4/409 (0%) Query 1 VVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 +VT R R AL AGA ARWASRVTGRGAGAMIGGLVAMTLDRSIL QLG GRRTVV+TGTN Sbjct 1 MVTPRGRAALTAGAAARWASRVTGRGAGAMIGGLVAMTLDRSILAQLGKGRRTVVITGTN 60 Query 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAA RDA LA LEVDEMHVPH+SDA Sbjct 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAADRDATLAALEVDEMHVPHVSDA 120 Query 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV 180 VDP+VVVLLNLSRDQLDRVGEIN IERTLRAGLARHP AVVVANCDDVLMTSAAYD P+V Sbjct 121 VDPSVVVLLNLSRDQLDRVGEINHIERTLRAGLARHPKAVVVANCDDVLMTSAAYDHPSV 180 Query 181 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG 240 VWVAAGG+W+NDSVSCPRSGEVIVR WYSTG DFKRP P WW+DD L+GPDG Sbjct 181 VWVAAGGSWANDSVSCPRSGEVIVRDGAD----WYSTGIDFKRPTPQWWYDDTHLHGPDG 236 Query 241 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR 300 L+LPM LALPG+VNRGNAAQAVAAAV LGADP AV AV VDEVAGRYRTVRIG H AR Sbjct 237 LSLPMTLALPGAVNRGNAAQAVAAAVTLGADPKAAVEAVSGVDEVAGRYRTVRIGDHTAR 296 Query 301 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGER 360 +LLAKNPAGWQEAL+MVDKH GVVIAVNG+VPDGEDLSWLWDVRFEHFE+ +VVAAGER Sbjct 297 VLLAKNPAGWQEALSMVDKHGAGVVIAVNGQVPDGEDLSWLWDVRFEHFEQVQVVAAGER 356 Query 361 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRAL 409 GTDLAVRLGYAGVEHTLVHDT+AAI SCPPG VEV+ANYTAFLQL R L Sbjct 357 GTDLAVRLGYAGVEHTLVHDTLAAIKSCPPGHVEVIANYTAFLQLNRRL 405 >gi|342861921|ref|ZP_08718565.1| UDP-N-acetylmuramyl tripeptide synthase [Mycobacterium colombiense CECT 3035] gi|342130461|gb|EGT83770.1| UDP-N-acetylmuramyl tripeptide synthase [Mycobacterium colombiense CECT 3035] Length=412 Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/416 (89%), Positives = 384/416 (93%), Gaps = 7/416 (1%) Query 1 VVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 ++TTRARLALAAGAGARWASRVTGRGAGAMIGGL+AMTLDRS+LRQL GRRTV+VTGTN Sbjct 1 MITTRARLALAAGAGARWASRVTGRGAGAMIGGLIAMTLDRSVLRQLAGGRRTVIVTGTN 60 Query 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 GKSTTTRMT+AAL TLG VATNAEGANMDAGLVAALA RDA LA LEVDEMHVPH+SDA Sbjct 61 GKSTTTRMTSAALATLGPVATNAEGANMDAGLVAALAGKRDAPLAALEVDEMHVPHVSDA 120 Query 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV 180 V+P VVVLLNLSRDQLDRVGEINVIERTLRAGLARHP AVVVANCDDVLMTSAAYDSPNV Sbjct 121 VEPGVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPRAVVVANCDDVLMTSAAYDSPNV 180 Query 181 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG 240 VWVAAGGAWSNDSVSCPRSGE+IVR + HWYSTGADFKRP+PHWWFDD LYGPDG Sbjct 181 VWVAAGGAWSNDSVSCPRSGEIIVR----EPGHWYSTGADFKRPSPHWWFDDDALYGPDG 236 Query 241 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR 300 LALPMRLALPG+VNRGNAAQAVAAAVALGADPA AVAAV VDEVAGRYRTVR+GAH+ R Sbjct 237 LALPMRLALPGAVNRGNAAQAVAAAVALGADPASAVAAVSAVDEVAGRYRTVRVGAHEVR 296 Query 301 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFE---KTRVVAA 357 ILLAKNPAGWQEAL+MVDKHA GVVI+VNG+VPDGEDLSWLWDVRFEH K VVAA Sbjct 297 ILLAKNPAGWQEALSMVDKHAAGVVISVNGQVPDGEDLSWLWDVRFEHVAEACKGTVVAA 356 Query 358 GERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 413 GERGTDLAVRLGYAGVEHTLVHDTVAAIA CPPGRVEVVANYTAFLQLQRALAR G Sbjct 357 GERGTDLAVRLGYAGVEHTLVHDTVAAIAGCPPGRVEVVANYTAFLQLQRALARHG 412 >gi|333992635|ref|YP_004525249.1| UDP-N-acetylmuramyl tripeptide synthase [Mycobacterium sp. JDM601] gi|333488603|gb|AEF37995.1| UDP-N-acetylmuramyl tripeptide synthase [Mycobacterium sp. JDM601] Length=408 Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/411 (83%), Positives = 361/411 (88%), Gaps = 4/411 (0%) Query 1 VVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 ++T R RLALAAGA ARWASR+TGRGAGAMIGGLVAMTLDRSIL QLG GRR+VVVTGTN Sbjct 1 MITARGRLALAAGASARWASRITGRGAGAMIGGLVAMTLDRSILGQLGTGRRSVVVTGTN 60 Query 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 GKSTTTRM AAAL LG VATNAEGANMDAGLVAALAA R AELA LEVDEMHVPH++DA Sbjct 61 GKSTTTRMIAAALRDLGPVATNAEGANMDAGLVAALAADRTAELAALEVDEMHVPHVADA 120 Query 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV 180 V P VVVLLNLSRDQLDRVGEIN +ER LR GLARHP VVVANCDDVLMTSAAYD PNV Sbjct 121 VSPTVVVLLNLSRDQLDRVGEINAVERALRTGLARHPQTVVVANCDDVLMTSAAYDCPNV 180 Query 181 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG 240 VWVAAGG W+ DSVSCPRSGEVI R+ +DHW STG DF RP P WWFDD +LYGPDG Sbjct 181 VWVAAGGGWAGDSVSCPRSGEVIDRR----DDHWSSTGCDFARPTPQWWFDDDSLYGPDG 236 Query 241 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR 300 L LPMRLALPG+VNRGNAAQAVAAAVALGADP AVAAV VDEVAGRY++V++G H R Sbjct 237 LVLPMRLALPGTVNRGNAAQAVAAAVALGADPVKAVAAVSSVDEVAGRYKSVQVGQHTVR 296 Query 301 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGER 360 +LLAKNPAGWQEAL+MVD A GVVIAVNG+VPDGEDLSWLWDVRFEHFE VVAAGER Sbjct 297 MLLAKNPAGWQEALSMVDHRAAGVVIAVNGQVPDGEDLSWLWDVRFEHFEGVHVVAAGER 356 Query 361 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALAR 411 GTDLAVRLGYAGV+HTLVHDT+AAIASCPPG VEVVANYTAFLQLQR L R Sbjct 357 GTDLAVRLGYAGVQHTLVHDTLAAIASCPPGPVEVVANYTAFLQLQRRLDR 407 >gi|108801864|ref|YP_642061.1| hypothetical protein Mmcs_4901 [Mycobacterium sp. MCS] gi|119871017|ref|YP_940969.1| hypothetical protein Mkms_4990 [Mycobacterium sp. KMS] gi|108772283|gb|ABG11005.1| Domain of unknown function DUF1727 [Mycobacterium sp. MCS] gi|119697106|gb|ABL94179.1| domain of unknown function DUF1727 [Mycobacterium sp. KMS] Length=408 Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/409 (85%), Positives = 366/409 (90%), Gaps = 4/409 (0%) Query 1 VVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 +VT R R AL AGA ARWASRVTGRGAGAMIGGLVAMTLDRSIL QLG GRRTVV+TGTN Sbjct 1 MVTPRGRAALTAGAAARWASRVTGRGAGAMIGGLVAMTLDRSILAQLGKGRRTVVITGTN 60 Query 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAA RDA LA LEVDEMHVPH+SDA Sbjct 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAADRDATLAALEVDEMHVPHVSDA 120 Query 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV 180 VDP+VVVLLNLSRDQLDRVGEIN IERTLRAGLARHP AVVVANCDDVLMTSAAYD P+V Sbjct 121 VDPSVVVLLNLSRDQLDRVGEINHIERTLRAGLARHPKAVVVANCDDVLMTSAAYDHPSV 180 Query 181 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG 240 VWVAAGG+W+NDSVSCPRSGEVIVR WYSTG DFKRP P WW+DD L+GPDG Sbjct 181 VWVAAGGSWANDSVSCPRSGEVIVRDGAD----WYSTGIDFKRPTPQWWYDDTHLHGPDG 236 Query 241 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR 300 L+LPM LALPG+VNRGNAAQAVAAAV LG DP AV AV VDEVAGRYRTVR+G H AR Sbjct 237 LSLPMTLALPGAVNRGNAAQAVAAAVTLGVDPRAAVEAVSGVDEVAGRYRTVRLGDHTAR 296 Query 301 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGER 360 +LLAKNPAGWQEAL+MVDKH GVVIAVNG+VPDGEDLSWLWDVRFEHFE+ +VVAAGER Sbjct 297 VLLAKNPAGWQEALSMVDKHGAGVVIAVNGQVPDGEDLSWLWDVRFEHFEQVQVVAAGER 356 Query 361 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRAL 409 GTDLAVRLGYAGVEHTL+HDT+AAI SCPPG VEV+ANYTAFLQL R L Sbjct 357 GTDLAVRLGYAGVEHTLLHDTLAAIKSCPPGHVEVIANYTAFLQLNRRL 405 >gi|15828250|ref|NP_302513.1| ligase [Mycobacterium leprae TN] gi|221230727|ref|YP_002504143.1| putative ligase [Mycobacterium leprae Br4923] gi|3150111|emb|CAA19164.1| hypothetical protein MLCB2407.24c [Mycobacterium leprae] gi|13093943|emb|CAC31842.1| possible ligase [Mycobacterium leprae] gi|219933834|emb|CAR72424.1| possible ligase [Mycobacterium leprae Br4923] Length=411 Score = 632 bits (1629), Expect = 4e-179, Method: Compositional matrix adjust. Identities = 335/398 (85%), Positives = 354/398 (89%), Gaps = 6/398 (1%) Query 18 WASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTL- 76 W SR+TGRGAG MIGGLVA+TLDRSIL QLG GRRT+VVTGTNGKSTTTRMT AL TL Sbjct 18 WTSRITGRGAGTMIGGLVAITLDRSILSQLGAGRRTIVVTGTNGKSTTTRMTVDALSTLA 77 Query 77 -GAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQ 135 G+VATNAEGANMDAGLVAALAA+R A LAVLEVDEMHVP ++DA+ P +VVLLNLSRDQ Sbjct 78 PGSVATNAEGANMDAGLVAALAANRAATLAVLEVDEMHVPRVADALTPHIVVLLNLSRDQ 137 Query 136 LDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVS 195 LDRVGEINVIERTLR GLARHP AVV+ANCDDVLMTS AYDSPNVVWVAAGG WSNDSVS Sbjct 138 LDRVGEINVIERTLRTGLARHPTAVVIANCDDVLMTSVAYDSPNVVWVAAGGTWSNDSVS 197 Query 196 CPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDGLALPMRLALPGSVNR 255 CPRSGEVIVRK HWYSTGADFKRP+PHWWFDD TLYGPD LALPMRLALPGSVNR Sbjct 198 CPRSGEVIVRK----NRHWYSTGADFKRPSPHWWFDDNTLYGPDELALPMRLALPGSVNR 253 Query 256 GNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEALA 315 GNAAQAVA AV LGAD AVAAV +VDEVAGRYR+VRIG H RILLAKNPAGWQEAL+ Sbjct 254 GNAAQAVATAVMLGADATTAVAAVSKVDEVAGRYRSVRIGEHTTRILLAKNPAGWQEALS 313 Query 316 MVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERGTDLAVRLGYAGVEH 375 MVD A GVVI++NG+VPDG+DLSWLWDVRFEHFEK VVAAGERGTDLAVRL YAGVEH Sbjct 314 MVDTQAAGVVISINGQVPDGKDLSWLWDVRFEHFEKIPVVAAGERGTDLAVRLRYAGVEH 373 Query 376 TLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 413 TLVHDTVAAIASCPPG+VEVVANYTAF QLQR LAR G Sbjct 374 TLVHDTVAAIASCPPGQVEVVANYTAFRQLQRRLARHG 411 >gi|240173341|ref|ZP_04751999.1| ligase [Mycobacterium kansasii ATCC 12478] Length=380 Score = 631 bits (1628), Expect = 6e-179, Method: Compositional matrix adjust. Identities = 343/382 (90%), Positives = 361/382 (95%), Gaps = 4/382 (1%) Query 30 MIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLGAVATNAEGANMD 89 MIGGLVAMTLDRS+LRQL +GRRTVVVTGTNGKSTTTRMTAAALGTLGAVATNAEGANMD Sbjct 1 MIGGLVAMTLDRSVLRQLAVGRRTVVVTGTNGKSTTTRMTAAALGTLGAVATNAEGANMD 60 Query 90 AGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLDRVGEINVIERTL 149 AGLVAALAA R AELAVLEVDEMHVPH+SDAV PAV+VLLNLSRDQLDRVGEINVIERTL Sbjct 61 AGLVAALAADRRAELAVLEVDEMHVPHVSDAVQPAVIVLLNLSRDQLDRVGEINVIERTL 120 Query 150 RAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCPRSGEVIVRKAPS 209 RAGLAR P AVVVANCDDVLMTSAAYDSP VVWVAAGG+WSNDSVSCPRSGEVIVR Sbjct 121 RAGLARQPAAVVVANCDDVLMTSAAYDSPRVVWVAAGGSWSNDSVSCPRSGEVIVR---- 176 Query 210 QEDHWYSTGADFKRPAPHWWFDDATLYGPDGLALPMRLALPGSVNRGNAAQAVAAAVALG 269 ++ HWYSTGADFKRP+PHWWFDD TLYGPDGLALPMRLALPG+VNRGNAAQAVAAAVA+G Sbjct 177 EQGHWYSTGADFKRPSPHWWFDDDTLYGPDGLALPMRLALPGAVNRGNAAQAVAAAVAVG 236 Query 270 ADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEALAMVDKHADGVVIAVN 329 ADPA AVAAV +VDEVAGRYRTV +G H+ARILLAKNPAGWQEAL+MVDK A GVVIAVN Sbjct 237 ADPASAVAAVAEVDEVAGRYRTVMVGPHEARILLAKNPAGWQEALSMVDKQAAGVVIAVN 296 Query 330 GRVPDGEDLSWLWDVRFEHFEKTRVVAAGERGTDLAVRLGYAGVEHTLVHDTVAAIASCP 389 G+VPDGEDLSWLWDVRFEHFE+T VVAAGERGTDLAVRLGYAGV+HTLV DT+AAIASCP Sbjct 297 GQVPDGEDLSWLWDVRFEHFEETAVVAAGERGTDLAVRLGYAGVQHTLVRDTLAAIASCP 356 Query 390 PGRVEVVANYTAFLQLQRALAR 411 PGRVEVVANYTAFLQLQRALAR Sbjct 357 PGRVEVVANYTAFLQLQRALAR 378 >gi|120406463|ref|YP_956292.1| hypothetical protein Mvan_5520 [Mycobacterium vanbaalenii PYR-1] gi|119959281|gb|ABM16286.1| domain of unknown function DUF1727 [Mycobacterium vanbaalenii PYR-1] Length=425 Score = 619 bits (1595), Expect = 4e-175, Method: Compositional matrix adjust. Identities = 347/411 (85%), Positives = 365/411 (89%), Gaps = 4/411 (0%) Query 1 VVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 +VT R R+ALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSIL QLG GRRTVV+TGTN Sbjct 18 MVTPRGRIALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILGQLGRGRRTVVITGTN 77 Query 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 GKSTTTRMTAAAL T+G VATNAEGANMDAGLVAALAA A LA LEVDEMHVPH+SDA Sbjct 78 GKSTTTRMTAAALATVGPVATNAEGANMDAGLVAALAAAPGAPLAALEVDEMHVPHVSDA 137 Query 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV 180 V PAV+VLLNLSRDQLDRVGEIN IERTLRAGLARHP AVVVANCDDVLMTSAAYDSP+V Sbjct 138 VSPAVIVLLNLSRDQLDRVGEINHIERTLRAGLARHPSAVVVANCDDVLMTSAAYDSPDV 197 Query 181 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDG 240 VWVAAGG W++DSVSCPRSGE+IVR HWYSTG DFKRP P WWFDD ++GPDG Sbjct 198 VWVAAGGGWASDSVSCPRSGEIIVRDGA----HWYSTGCDFKRPTPDWWFDDTHIHGPDG 253 Query 241 LALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQAR 300 L LPM L LPG+VNRGNA QAVAAAV LGADPA AVAAV VDEVAGRYRTV+IG H AR Sbjct 254 LTLPMTLTLPGTVNRGNATQAVAAAVVLGADPAAAVAAVSAVDEVAGRYRTVQIGGHTAR 313 Query 301 ILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGER 360 ILLAKNPAGWQEAL+MVD+ A GVVIAVNG+VPDGEDLSWLWDVRFEHFE VVAAGER Sbjct 314 ILLAKNPAGWQEALSMVDRDAAGVVIAVNGQVPDGEDLSWLWDVRFEHFESVPVVAAGER 373 Query 361 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALAR 411 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPG VEV+ANYTAFLQL R L R Sbjct 374 GTDLAVRLGYAGVEHTLVHDTVAAIASCPPGHVEVLANYTAFLQLNRVLDR 424 >gi|183985198|ref|YP_001853489.1| UDP-N-acetylmuramyl tripeptide synthase [Mycobacterium marinum M] gi|183178524|gb|ACC43634.1| UDP-N-acetylmuramyl tripeptide synthase [Mycobacterium marinum M] Length=384 Score = 617 bits (1592), Expect = 9e-175, Method: Compositional matrix adjust. Identities = 333/388 (86%), Positives = 353/388 (91%), Gaps = 8/388 (2%) Query 30 MIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLGAVATNAEGANMD 89 MIGGLVAMTLDRS+LRQL GRRTVV+TGTNGKSTTTRMTAAAL TLGAVATNAEGANMD Sbjct 1 MIGGLVAMTLDRSVLRQLASGRRTVVITGTNGKSTTTRMTAAALSTLGAVATNAEGANMD 60 Query 90 AGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLDRVGEINVIERTL 149 AGLVAALAA R A LA LEVDEMHVPH+SDAV+PAV+VLLNLSRDQLDRVGEINVIERTL Sbjct 61 AGLVAALAADRRAGLAALEVDEMHVPHVSDAVEPAVLVLLNLSRDQLDRVGEINVIERTL 120 Query 150 RAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCPRSGEVIVRKAPS 209 RAGLARHP+AVVVANCDDVLMTSAAYDSPNVVWVAAGG+WSNDSVSCPRSGEVIVR Sbjct 121 RAGLARHPNAVVVANCDDVLMTSAAYDSPNVVWVAAGGSWSNDSVSCPRSGEVIVR---- 176 Query 210 QEDHWYSTGADFKRPAPHWWFDDATLYGPDGLALPMRLALPGSVNRGNAAQAVAAAVALG 269 + HWYSTGADFKRP+P WWFDD +YGPDGLALPMRLALPG+VNRGNA QAVAAAVALG Sbjct 177 EPGHWYSTGADFKRPSPQWWFDDEAVYGPDGLALPMRLALPGAVNRGNATQAVAAAVALG 236 Query 270 ADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEALAMVDKHADGVVIAVN 329 ADPA+AVAAV VDEVAGRYR+ +G HQARILLAKNPAGWQEAL+MVD+ A GVVI+VN Sbjct 237 ADPALAVAAVAAVDEVAGRYRSFALGRHQARILLAKNPAGWQEALSMVDERAAGVVISVN 296 Query 330 GRVPDGEDLSWLWDVRFEH----FEKTRVVAAGERGTDLAVRLGYAGVEHTLVHDTVAAI 385 G+VPDGEDLSWLWDVRFEH F+ T VVAAGERGTDLAVRLGYAGV+HTLVHDTVAAI Sbjct 297 GQVPDGEDLSWLWDVRFEHFAEAFKTTPVVAAGERGTDLAVRLGYAGVQHTLVHDTVAAI 356 Query 386 ASCPPGRVEVVANYTAFLQLQRALARRG 413 SCPPG VEVVANYTAFLQLQR L R G Sbjct 357 ESCPPGPVEVVANYTAFLQLQRRLTRNG 384 >gi|118619458|ref|YP_907790.1| UDP-N-acetylmuramyl tripeptide synthase [Mycobacterium ulcerans Agy99] gi|118571568|gb|ABL06319.1| UDP-N-acetylmuramyl tripeptide synthase [Mycobacterium ulcerans Agy99] Length=384 Score = 613 bits (1582), Expect = 1e-173, Method: Compositional matrix adjust. Identities = 332/388 (86%), Positives = 352/388 (91%), Gaps = 8/388 (2%) Query 30 MIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLGAVATNAEGANMD 89 MIGGLVAMTLDRS+LRQL GRRTVV+TGTNGKSTTTRMTAAAL TLGAVATNAEGANMD Sbjct 1 MIGGLVAMTLDRSVLRQLASGRRTVVITGTNGKSTTTRMTAAALSTLGAVATNAEGANMD 60 Query 90 AGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLDRVGEINVIERTL 149 AGLVAALAA R A LA LEVDEMHVPH+SDAV+PAV+VLLNLSRDQLDRVGEINVIERTL Sbjct 61 AGLVAALAADRRAGLAALEVDEMHVPHVSDAVEPAVLVLLNLSRDQLDRVGEINVIERTL 120 Query 150 RAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCPRSGEVIVRKAPS 209 RAGLARHP+AVVVANCDDVLMTSAAYDSPNVVWVAAGG+WSNDSVSCPRSGEVIVR Sbjct 121 RAGLARHPNAVVVANCDDVLMTSAAYDSPNVVWVAAGGSWSNDSVSCPRSGEVIVR---- 176 Query 210 QEDHWYSTGADFKRPAPHWWFDDATLYGPDGLALPMRLALPGSVNRGNAAQAVAAAVALG 269 + HWYS GADFKRP P WWFDD +YGPDGLALPMRLALPG+VNRGNA QAVAAAVALG Sbjct 177 EPGHWYSAGADFKRPRPQWWFDDEAVYGPDGLALPMRLALPGAVNRGNATQAVAAAVALG 236 Query 270 ADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEALAMVDKHADGVVIAVN 329 ADPA+AVAAV +VDEVAGRYR+ +G HQARILLAKNPAGWQEAL+MVD+ A GVVI+VN Sbjct 237 ADPALAVAAVAEVDEVAGRYRSFALGRHQARILLAKNPAGWQEALSMVDERAAGVVISVN 296 Query 330 GRVPDGEDLSWLWDVRFEH----FEKTRVVAAGERGTDLAVRLGYAGVEHTLVHDTVAAI 385 G+VPDGEDLSWLWDVRFEH F+ T VVAAGERGTDLAVRLGYAGV+HTLVHDTVAAI Sbjct 297 GQVPDGEDLSWLWDVRFEHFAEAFKTTPVVAAGERGTDLAVRLGYAGVQHTLVHDTVAAI 356 Query 386 ASCPPGRVEVVANYTAFLQLQRALARRG 413 SCPPG VEVVANYTAFLQLQR L R G Sbjct 357 ESCPPGPVEVVANYTAFLQLQRRLTRNG 384 >gi|118473806|ref|YP_890495.1| mur ligase [Mycobacterium smegmatis str. MC2 155] gi|118175093|gb|ABK75989.1| mur ligase family protein [Mycobacterium smegmatis str. MC2 155] Length=407 Score = 613 bits (1580), Expect = 2e-173, Method: Compositional matrix adjust. Identities = 315/390 (81%), Positives = 345/390 (89%), Gaps = 5/390 (1%) Query 22 VTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLGAVAT 81 VTGRGAGAMIGGLVAMTLDRS+LRQLG GRRT +VTGTNGKSTTTRM AAAL LG VA+ Sbjct 22 VTGRGAGAMIGGLVAMTLDRSVLRQLGQGRRTAIVTGTNGKSTTTRMIAAALAPLGPVAS 81 Query 82 NAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLDRVGE 141 N EGANMDAGLV+ALAA+RDA LA LEVDEMHVPH+SDAV P+V+VLLNLSRDQLDRVGE Sbjct 82 NTEGANMDAGLVSALAANRDAGLAALEVDEMHVPHVSDAVSPSVIVLLNLSRDQLDRVGE 141 Query 142 INVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCPRSGE 201 IN IERTLRAGLARHPDAV+VANCDDVLMTSAAYD+P+VVWVAAGG W+NDSVSCPRSGE Sbjct 142 INHIERTLRAGLARHPDAVIVANCDDVLMTSAAYDNPDVVWVAAGGTWANDSVSCPRSGE 201 Query 202 VIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDGLALPMRLALPGSVNRGNAAQA 261 VIVR WYSTG DFKRP+P WWFD+ ++GPDGL++PM LALPG+VNRGNA QA Sbjct 202 VIVRDGRD----WYSTGTDFKRPSPQWWFDETHIHGPDGLSVPMELALPGTVNRGNATQA 257 Query 262 VAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGA-HQARILLAKNPAGWQEALAMVDKH 320 VAAAVALGADP AVAAV VDEVAGRYRTV++G H AR+LLAKNPAGWQEAL+MVD+ Sbjct 258 VAAAVALGADPVAAVAAVSTVDEVAGRYRTVQVGPRHTARVLLAKNPAGWQEALSMVDRT 317 Query 321 ADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERGTDLAVRLGYAGVEHTLVHD 380 GVVIAVNG+VPDGEDLSWLWDVRFE F +VVAAGERGTDLAVRLGYA VEHTLVHD Sbjct 318 GAGVVIAVNGQVPDGEDLSWLWDVRFEDFSGVQVVAAGERGTDLAVRLGYADVEHTLVHD 377 Query 381 TVAAIASCPPGRVEVVANYTAFLQLQRALA 410 T++AI SCPPG VEV+ANYTAFLQL R L+ Sbjct 378 TISAIKSCPPGHVEVIANYTAFLQLNRRLS 407 >gi|145221883|ref|YP_001132561.1| hypothetical protein Mflv_1291 [Mycobacterium gilvum PYR-GCK] gi|315446381|ref|YP_004079260.1| UDP-N-acetylmuramyl tripeptide synthase [Mycobacterium sp. Spyr1] gi|145214369|gb|ABP43773.1| domain of unknown function DUF1727 [Mycobacterium gilvum PYR-GCK] gi|315264684|gb|ADU01426.1| UDP-N-acetylmuramyl tripeptide synthase [Mycobacterium sp. Spyr1] Length=406 Score = 607 bits (1566), Expect = 9e-172, Method: Compositional matrix adjust. Identities = 332/392 (85%), Positives = 351/392 (90%), Gaps = 4/392 (1%) Query 18 WASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLG 77 WASRVTGRGAGAMIGGLVAMTLD+SIL QLG GRR+VV+TGTNGKSTTTRMTAAAL TLG Sbjct 18 WASRVTGRGAGAMIGGLVAMTLDKSILGQLGHGRRSVVITGTNGKSTTTRMTAAALATLG 77 Query 78 AVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLD 137 VATN+EGANMDAGLVAALAA DA LA LEVDEMHVPH+SDAVDP+VVVLLNLSRDQLD Sbjct 78 PVATNSEGANMDAGLVAALAAAPDATLAALEVDEMHVPHVSDAVDPSVVVLLNLSRDQLD 137 Query 138 RVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCP 197 RVGEIN IERTLRAGLARHP AVVVANCDDVLMTSAAYD PNVVWVAAGG W++DSVSCP Sbjct 138 RVGEINHIERTLRAGLARHPSAVVVANCDDVLMTSAAYDHPNVVWVAAGGGWASDSVSCP 197 Query 198 RSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDGLALPMRLALPGSVNRGN 257 RSGE IVR HWYSTG +FKRP P WWFDD L+GPDGL LPM L LPG+VNRGN Sbjct 198 RSGETIVRDGA----HWYSTGCEFKRPTPAWWFDDTHLHGPDGLTLPMTLNLPGTVNRGN 253 Query 258 AAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEALAMV 317 A QAVAAAV LGADPA AV AV VDEVAGRYRTVRIG+H AR+LLAKNPAGWQEAL+MV Sbjct 254 ATQAVAAAVTLGADPAAAVTAVSAVDEVAGRYRTVRIGSHTARLLLAKNPAGWQEALSMV 313 Query 318 DKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERGTDLAVRLGYAGVEHTL 377 D+ A GVVIAVNG+VPDGEDLSWLWDVRFEHFEK +VVAAGERGTDLAVRLGYAGVEHTL Sbjct 314 DRDAAGVVIAVNGQVPDGEDLSWLWDVRFEHFEKAQVVAAGERGTDLAVRLGYAGVEHTL 373 Query 378 VHDTVAAIASCPPGRVEVVANYTAFLQLQRAL 409 VHDTVAAIASCPPG VEV+ANYTAFLQL R + Sbjct 374 VHDTVAAIASCPPGHVEVLANYTAFLQLNRRI 405 >gi|169627428|ref|YP_001701077.1| putative Mur ligase family protein [Mycobacterium abscessus ATCC 19977] gi|169239395|emb|CAM60423.1| Putative Mur ligase family protein [Mycobacterium abscessus] Length=422 Score = 583 bits (1502), Expect = 2e-164, Method: Compositional matrix adjust. Identities = 304/419 (73%), Positives = 347/419 (83%), Gaps = 11/419 (2%) Query 2 VTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNG 61 ++ R R+ALAAG+ ARWASR++GRGAG+MIGGL+A+ LD S+L QLG GRRTV++TGTNG Sbjct 6 LSPRGRIALAAGSAARWASRISGRGAGSMIGGLIALKLDGSVLAQLGRGRRTVLITGTNG 65 Query 62 KSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAV 121 KSTTTRMTAAAL T+G VATN EG+NMDAGLVAALA R+A++AVLEVDEMHVPH++DAV Sbjct 66 KSTTTRMTAAALATVGPVATNTEGSNMDAGLVAALAGTREADVAVLEVDEMHVPHVADAV 125 Query 122 DPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVV 181 +PAV+VLLNLSRDQLDRVGEIN IERTLR GLARH DAV+VANCDDVLM SAAYDSP+VV Sbjct 126 NPAVIVLLNLSRDQLDRVGEINNIERTLRKGLARHRDAVIVANCDDVLMASAAYDSPHVV 185 Query 182 WVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDGL 241 WVAAGG W+ DSVSCPRSGE+I+R + WYSTG DF RP P WWFDD +YGP G+ Sbjct 186 WVAAGGGWAGDSVSCPRSGELIMRDG----NRWYSTGTDFARPDPDWWFDDDRIYGPSGI 241 Query 242 ALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARI 301 +LPM L LPG+ NRGNA AVAAAV LGA P AV AV VD+VAGRYR++ +G H R+ Sbjct 242 SLPMSLTLPGTANRGNATLAVAAAVELGARPGPAVDAVSAVDQVAGRYRSINLGDHTIRL 301 Query 302 LLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTR-------V 354 LLAKNPAGWQEAL+MVD ADG+VIAVNG+VPDGEDLSWLWDV FEHF V Sbjct 302 LLAKNPAGWQEALSMVDTDADGLVIAVNGQVPDGEDLSWLWDVNFEHFACDNGESPVPPV 361 Query 355 VAAGERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 413 VAAGERGTDLAVRL YA V HTL HD V AI +CPPGRV+V+ANYTAFL L RALA+ G Sbjct 362 VAAGERGTDLAVRLTYASVTHTLQHDPVQAIKACPPGRVDVIANYTAFLNLNRALAKGG 420 >gi|312137906|ref|YP_004005242.1| murein ligase [Rhodococcus equi 103S] gi|325673319|ref|ZP_08153011.1| murein peptide ligase [Rhodococcus equi ATCC 33707] gi|311887245|emb|CBH46554.1| putative murein ligase [Rhodococcus equi 103S] gi|325555909|gb|EGD25579.1| murein peptide ligase [Rhodococcus equi ATCC 33707] Length=418 Score = 558 bits (1439), Expect = 4e-157, Method: Compositional matrix adjust. Identities = 300/411 (73%), Positives = 338/411 (83%), Gaps = 4/411 (0%) Query 2 VTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNG 61 + R RLA+ A A A WAS+ GRG G+MIGGL+A+ +D ++++QLG GRR+VV+TGTNG Sbjct 7 INLRGRLAMRAAAAAAWASQKAGRGKGSMIGGLIALKIDPTLMQQLGRGRRSVVITGTNG 66 Query 62 KSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAV 121 KSTTTRMTAAAL TL VAT A+GANMDAG+VAAL A DA LA LEVDE+HVPH+SDAV Sbjct 67 KSTTTRMTAAALATLDEVATQADGANMDAGIVAALTARPDAPLAALEVDELHVPHVSDAV 126 Query 122 DPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVV 181 +P VVVLLNLSRDQLDRVGEIN+IER LRAGL RHPDAVVVANCDDVL+TS AYD NVV Sbjct 127 NPEVVVLLNLSRDQLDRVGEINMIERALRAGLQRHPDAVVVANCDDVLVTSVAYDCKNVV 186 Query 182 WVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDGL 241 WVAAGG W+NDSVSCPR+GE IV P HW STG+DF RP P WW DD LYGPDGL Sbjct 187 WVAAGGGWANDSVSCPRTGEPIVWDGP----HWRSTGSDFARPTPDWWLDDDNLYGPDGL 242 Query 242 ALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARI 301 +PM+L LPG NRGNAAQAVAAAVA+GA AVAA VDEVAGRY TV++GAH + Sbjct 243 VIPMKLTLPGKANRGNAAQAVAAAVAMGARAEDAVAAASIVDEVAGRYSTVQVGAHSVHM 302 Query 302 LLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERG 361 LLAKNPAGWQEAL+M+D DG+VIAVNG+VPDGEDLSWLWDVRFEHFE +VVAAGERG Sbjct 303 LLAKNPAGWQEALSMIDHSVDGLVIAVNGQVPDGEDLSWLWDVRFEHFEGVKVVAAGERG 362 Query 362 TDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARR 412 TDLAVRL YAGVEHTL HD + AIASCPPGRVEV+ANYTAF L A+A+ Sbjct 363 TDLAVRLTYAGVEHTLEHDPMRAIASCPPGRVEVLANYTAFRDLNTAIAKE 413 >gi|333917904|ref|YP_004491485.1| Murein peptide ligase [Amycolicicoccus subflavus DQS3-9A1] gi|333480125|gb|AEF38685.1| Murein peptide ligase [Amycolicicoccus subflavus DQS3-9A1] Length=428 Score = 553 bits (1426), Expect = 1e-155, Method: Compositional matrix adjust. Identities = 287/410 (70%), Positives = 333/410 (82%), Gaps = 4/410 (0%) Query 2 VTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNG 61 +T R +LAL A A WASR +GRGAG MIGGL+A+ +D+SI++QL RRTV+++GTNG Sbjct 18 ITARGKLALRAARSASWASRRSGRGAGNMIGGLIALKIDKSIMKQLASYRRTVLISGTNG 77 Query 62 KSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAV 121 KSTTTRMT+AAL LG VATN +GANMDAG+VAA + A LA +EVDE+H+PH+SD Sbjct 78 KSTTTRMTSAALSELGEVATNTDGANMDAGIVAAFNQNLHAPLAAIEVDELHLPHVSDFT 137 Query 122 DPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVV 181 P ++LLNLSRDQLDRVGEIN+IER LRAGL RHP+AVVVANCDDVL+TSAAYD NVV Sbjct 138 SPRAIILLNLSRDQLDRVGEINMIERRLRAGLERHPEAVVVANCDDVLVTSAAYDCQNVV 197 Query 182 WVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDGL 241 WVAAG +W DSVSCPR+GE I R W STG+DF+RPAPHWW DD LYGPDG+ Sbjct 198 WVAAGNSWVGDSVSCPRTGEPIARDGTD----WRSTGSDFRRPAPHWWVDDDHLYGPDGV 253 Query 242 ALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARI 301 +PM L+LPG NRGNAAQAVAAAVA+G P AVAAV V EVAGRY TV++G+H R+ Sbjct 254 KVPMSLSLPGRANRGNAAQAVAAAVAMGVAPDAAVAAVSGVREVAGRYSTVQVGSHNVRM 313 Query 302 LLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERG 361 LLAKNPAGWQEAL+M+D DG+VIAVNG+VPDGEDLSWLWDVRFEHFE +VVAAGERG Sbjct 314 LLAKNPAGWQEALSMIDHSVDGLVIAVNGQVPDGEDLSWLWDVRFEHFEGIQVVAAGERG 373 Query 362 TDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALAR 411 TDL VRL YAGVEHTL+ D +AAI SCPPGRVEV+ANYTAFL L RA+ R Sbjct 374 TDLGVRLTYAGVEHTLIKDPIAAIRSCPPGRVEVLANYTAFLGLNRAIER 423 >gi|229492120|ref|ZP_04385929.1| mur ligase family protein [Rhodococcus erythropolis SK121] gi|229320908|gb|EEN86720.1| mur ligase family protein [Rhodococcus erythropolis SK121] Length=417 Score = 549 bits (1415), Expect = 3e-154, Method: Compositional matrix adjust. Identities = 292/411 (72%), Positives = 334/411 (82%), Gaps = 4/411 (0%) Query 2 VTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNG 61 +T R +LA+ A A A WAS+ GRG G+MIGGL+A+ +D +++ QLG G+RTVVVTGTNG Sbjct 7 ITARGKLAMRAAAAASWASQKAGRGKGSMIGGLIALKIDPTLMTQLGRGKRTVVVTGTNG 66 Query 62 KSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAV 121 KSTTTRMTAAAL TLG VAT A+GANMDAG+VAALAA DA LA LEVDE+HVPH++DAV Sbjct 67 KSTTTRMTAAALATLGDVATQADGANMDAGIVAALAARTDATLAALEVDELHVPHVADAV 126 Query 122 DPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVV 181 +P V+VLLNLSRDQLDRVGEIN+IER LRA + HP+AV+VANCDDVL+TS AYD+ NVV Sbjct 127 NPEVIVLLNLSRDQLDRVGEINMIERKLRACVNAHPNAVIVANCDDVLVTSVAYDATNVV 186 Query 182 WVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDGL 241 WVAAGG W+ DSVSCPR+GE IV + HW STG+DF RP P WW DD LYGPDGL Sbjct 187 WVAAGGGWAGDSVSCPRTGEPIVWEG----KHWRSTGSDFARPEPTWWLDDDNLYGPDGL 242 Query 242 ALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARI 301 +PM L LPG NRGNAAQAVAAA ALGADP AVAA V EVAGRY TV +G H + Sbjct 243 KIPMTLTLPGKANRGNAAQAVAAAAALGADPVGAVAAASTVQEVAGRYSTVEVGPHSVHM 302 Query 302 LLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERG 361 LLAKNPAGWQEAL+M+D DG+VIAVNG+VPDGEDLSWLWDV+FEHFE +VVAAGERG Sbjct 303 LLAKNPAGWQEALSMIDPTVDGLVIAVNGQVPDGEDLSWLWDVKFEHFEGVKVVAAGERG 362 Query 362 TDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARR 412 TDLAVRL YAGVEHTL D + AIASCPPGRVEV+ANYTAF L A+A+ Sbjct 363 TDLAVRLTYAGVEHTLDPDPLRAIASCPPGRVEVLANYTAFRDLNTAIAKE 413 >gi|226303896|ref|YP_002763854.1| hypothetical protein RER_04070 [Rhodococcus erythropolis PR4] gi|226183011|dbj|BAH31115.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=417 Score = 549 bits (1414), Expect = 4e-154, Method: Compositional matrix adjust. Identities = 291/411 (71%), Positives = 334/411 (82%), Gaps = 4/411 (0%) Query 2 VTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNG 61 +T R +LA+ A A A WAS+ GRG G+MIGGL+A+ +D +++ QLG G+RTVVVTGTNG Sbjct 7 ITARGKLAMRAAAAASWASQKAGRGKGSMIGGLIALKIDPTLMTQLGRGKRTVVVTGTNG 66 Query 62 KSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAV 121 KSTTTRMTAAAL TLG VAT A+GANMDAG+VAALAA DA LA LEVDE+HVPH++DAV Sbjct 67 KSTTTRMTAAALATLGDVATQADGANMDAGIVAALAARTDATLAALEVDELHVPHVADAV 126 Query 122 DPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVV 181 +P V+VLLNLSRDQLDRVGEIN+IER LRA + HP+AV+VANCDDVL+TS AYD+ NVV Sbjct 127 NPEVIVLLNLSRDQLDRVGEINMIERKLRACVNAHPNAVIVANCDDVLVTSVAYDATNVV 186 Query 182 WVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDGL 241 WVAAGG W+ DSVSCPR+GE IV + HW STG+DF RP P WW DD LYGPDGL Sbjct 187 WVAAGGGWAGDSVSCPRTGEPIVWEG----KHWRSTGSDFARPEPTWWLDDDNLYGPDGL 242 Query 242 ALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARI 301 +PM L LPG NRGNAAQAVAAA ALGADP AVAA V EVAGRY TV +G H + Sbjct 243 KIPMTLTLPGKANRGNAAQAVAAAAALGADPVGAVAAASTVQEVAGRYSTVEVGPHSVHM 302 Query 302 LLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERG 361 LLAKNPAGWQEAL+M+D DG+VIAVNG+VPDGEDLSWLWDV+FEHFE +VVAAGERG Sbjct 303 LLAKNPAGWQEALSMIDPTVDGLVIAVNGQVPDGEDLSWLWDVKFEHFEGVKVVAAGERG 362 Query 362 TDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARR 412 TDLAVRL YAGVEHTL D + AI+SCPPGRVEV+ANYTAF L A+A+ Sbjct 363 TDLAVRLTYAGVEHTLDPDPLRAISSCPPGRVEVLANYTAFRDLNTAIAKE 413 >gi|54022266|ref|YP_116508.1| hypothetical protein nfa3020 [Nocardia farcinica IFM 10152] gi|54013774|dbj|BAD55144.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=412 Score = 545 bits (1405), Expect = 4e-153, Method: Compositional matrix adjust. Identities = 280/389 (72%), Positives = 319/389 (83%), Gaps = 4/389 (1%) Query 24 GRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLGAVATNA 83 GRG G+MIGGL+A+ +D +I+ QLG GRRTV++TGTNGKSTTTRMT AALGTLGAVAT A Sbjct 26 GRGNGSMIGGLIALKIDPTIMTQLGRGRRTVLITGTNGKSTTTRMTTAALGTLGAVATQA 85 Query 84 EGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLDRVGEIN 143 +GANMDAG+VAAL+ H LA +EVDE+H+PH+SDA++PA VVLLNLSRDQLDRVGEIN Sbjct 86 DGANMDAGIVAALSRHPGVALAAIEVDELHLPHVSDALEPAAVVLLNLSRDQLDRVGEIN 145 Query 144 VIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCPRSGEVI 203 +IER LRAGLA+HPD VVVANCDDVLMTS AYD PNVVWVAAG W+ D+ SCPRSGE I Sbjct 146 MIERRLRAGLAKHPDTVVVANCDDVLMTSIAYDHPNVVWVAAGSGWAMDATSCPRSGEPI 205 Query 204 VRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDGLALPMRLALPGSVNRGNAAQAVA 263 V + HW STGADF+RP P WW + L GPDG P+ LALPG NRGNAAQAVA Sbjct 206 VWEG----THWRSTGADFERPQPDWWLEGEELVGPDGTRYPLHLALPGRANRGNAAQAVA 261 Query 264 AAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEALAMVDKHADG 323 AAVALGA+PA AV A V E+AGRY+TV++G H AR+LLAKNPAGWQEAL+M+D A G Sbjct 262 AAVALGAEPAKAVVATGTVREIAGRYKTVQVGPHSARLLLAKNPAGWQEALSMIDHSASG 321 Query 324 VVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERGTDLAVRLGYAGVEHTLVHDTVA 383 +VIAVNG+VPDGEDLSWLWDVRFEHFE +VVAAGER TDLAVRL YAGV HT V D + Sbjct 322 LVIAVNGQVPDGEDLSWLWDVRFEHFEDVQVVAAGERATDLAVRLTYAGVAHTTVPDPLR 381 Query 384 AIASCPPGRVEVVANYTAFLQLQRALARR 412 AIASCPPG+VEV+ANYTAF L R L R Sbjct 382 AIASCPPGQVEVLANYTAFRDLNRDLEAR 410 >gi|343926409|ref|ZP_08765914.1| hypothetical protein GOALK_060_00730 [Gordonia alkanivorans NBRC 16433] gi|343763647|dbj|GAA12840.1| hypothetical protein GOALK_060_00730 [Gordonia alkanivorans NBRC 16433] Length=416 Score = 527 bits (1357), Expect = 1e-147, Method: Compositional matrix adjust. Identities = 267/389 (69%), Positives = 309/389 (80%), Gaps = 5/389 (1%) Query 24 GRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLGAVATNA 83 GRG G+MIGGLVA +D I+R+L G+R+ ++TGTNGKSTTTRMTAAA+ LG VAT A Sbjct 23 GRGKGSMIGGLVAAKIDPDIMRRLAAGKRSAIITGTNGKSTTTRMTAAAMAELGEVATQA 82 Query 84 EGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLDRVGEIN 143 +GANMDAG++A L R A L LEVDE+HVPH+SDAVDP V+VLLNLSRDQLDRVGEIN Sbjct 83 DGANMDAGIIATLTLSRTAPLCALEVDELHVPHVSDAVDPEVLVLLNLSRDQLDRVGEIN 142 Query 144 VIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCPRSGEVI 203 +IER LR G+ARHP VVANCDDVL+TSAA+D+P+VVWVAAG W DSVSCPR+GE I Sbjct 143 LIERRLREGIARHPSTTVVANCDDVLVTSAAFDAPDVVWVAAGAGWVGDSVSCPRTGEPI 202 Query 204 VRKAPSQEDHWYSTG-ADFKRPAPHWWFDDATLYGPDGLALPMRLALPGSVNRGNAAQAV 262 VR D W STG +F+RP P WWFDD +YGP G + P+ LA+PG NRGNA QAV Sbjct 203 VRSG----DGWQSTGDENFRRPTPDWWFDDENIYGPGGFSAPLTLAVPGRANRGNATQAV 258 Query 263 AAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEALAMVDKHAD 322 AAAVA+GADP AVAAV V EVAGRY ++G H R LLAKNPAGWQEAL+M+D+ AD Sbjct 259 AAAVAMGADPGKAVAAVGTVGEVAGRYGVHQVGNHSVRTLLAKNPAGWQEALSMIDQDAD 318 Query 323 GVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERGTDLAVRLGYAGVEHTLVHDTV 382 G+VIAVNG+VPDGEDLSWLWDVRFE FE +VVAAGER DL+VRL YAG EHT + D + Sbjct 319 GLVIAVNGQVPDGEDLSWLWDVRFEAFETMQVVAAGERAADLSVRLLYAGAEHTTIPDPM 378 Query 383 AAIASCPPGRVEVVANYTAFLQLQRALAR 411 AAIASCPPGRVEV+ANYTAF L A+ R Sbjct 379 AAIASCPPGRVEVLANYTAFRDLGIAMER 407 >gi|111021195|ref|YP_704167.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Rhodococcus jostii RHA1] gi|110820725|gb|ABG96009.1| probable UDP-N-acetylmuramoylalanine--D-glutamate ligase [Rhodococcus jostii RHA1] Length=417 Score = 521 bits (1343), Expect = 7e-146, Method: Compositional matrix adjust. Identities = 288/411 (71%), Positives = 333/411 (82%), Gaps = 4/411 (0%) Query 2 VTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNG 61 +TTR +LAL A A A WAS+ GRG G+MIGGL+A+ +D +++ QLG GRRT V+TGTNG Sbjct 7 ITTRGKLALRAAAAASWASQKAGRGKGSMIGGLIALKIDPTLMEQLGAGRRTAVITGTNG 66 Query 62 KSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAV 121 KSTTTRMTAAAL TLG VAT A+GANMDAG+VAAL+ A LA LEVDE+HVPH+SDAV Sbjct 67 KSTTTRMTAAALSTLGEVATQADGANMDAGIVAALSTRVHAPLAALEVDELHVPHVSDAV 126 Query 122 DPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVV 181 +P +VLLNLSRDQLDRVGEIN+IER LRA +A HP+AVV+ANCDDVL+TS AYD+ NVV Sbjct 127 NPEALVLLNLSRDQLDRVGEINMIERKLRACVAAHPEAVVIANCDDVLVTSVAYDAKNVV 186 Query 182 WVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDGL 241 WVAAGG W++D+ SCPR+GE IV + HW STG+DF RP P WW DD LYGPDGL Sbjct 187 WVAAGGGWASDAASCPRTGEPIVWEG----SHWRSTGSDFARPTPDWWLDDENLYGPDGL 242 Query 242 ALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARI 301 +PM LALPG NRGNAAQAVAAAVA+GA AVAA V EVAGRY TV +G+H + Sbjct 243 KIPMTLALPGRANRGNAAQAVAAAVAMGAKAEDAVAAAATVQEVAGRYSTVEVGSHSVHM 302 Query 302 LLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERG 361 LLAKNPAGWQEAL+M+D DG+VIAVNG+VPDGEDLSWLWDVRFEHFE +VVAAGERG Sbjct 303 LLAKNPAGWQEALSMIDPTVDGLVIAVNGQVPDGEDLSWLWDVRFEHFEGVKVVAAGERG 362 Query 362 TDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARR 412 TDLAVRL YAGVEHTL + + AIASCPPGRVEV+ANYTAF L A+A+ Sbjct 363 TDLAVRLTYAGVEHTLDPNPLRAIASCPPGRVEVLANYTAFRDLNTAIAKE 413 >gi|296141669|ref|YP_003648912.1| hypothetical protein Tpau_4002 [Tsukamurella paurometabola DSM 20162] gi|296029803|gb|ADG80573.1| domain of unknown function DUF1727 [Tsukamurella paurometabola DSM 20162] Length=412 Score = 519 bits (1337), Expect = 3e-145, Method: Compositional matrix adjust. Identities = 283/409 (70%), Positives = 321/409 (79%), Gaps = 5/409 (1%) Query 5 RARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKST 64 RAR AL A A WAS+ GRG G+MIGGLVA+ ++ +++ L G+RT V+TGTNGKST Sbjct 7 RARTALFAARSAAWASQRAGRGKGSMIGGLVALKIEPNLMTSLAAGKRTAVITGTNGKST 66 Query 65 TTRMTAAALGTLGA-VATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDP 123 TTRMTA ALGTLGA VAT A+GANMDAG+VAAL AH A LA LEVDE+HVPH+ DAV Sbjct 67 TTRMTATALGTLGAEVATQADGANMDAGIVAALTAHLTAPLAALEVDELHVPHVLDAVQA 126 Query 124 AVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWV 183 +VLLNLSRDQLDRVGEIN IER +RA + HP VVANCDDVL+ S AYD+ VVWV Sbjct 127 ETLVLLNLSRDQLDRVGEINAIERKIRAAVDAHPALTVVANCDDVLVASVAYDAKEVVWV 186 Query 184 AAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDGLAL 243 AAG W++DSVSCPRSGE IVR +HWYSTG DF RPAP WW DD +YGPDG Sbjct 187 AAGAGWTSDSVSCPRSGEPIVRDG----EHWYSTGTDFSRPAPDWWVDDENIYGPDGFVA 242 Query 244 PMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILL 303 P+ L LPG NRGNAAQAVAAAVA+GADPA AVAAV V EVAGRY TV +G H R+LL Sbjct 243 PLTLKLPGRANRGNAAQAVAAAVAMGADPAAAVAAVGTVGEVAGRYSTVTVGEHTVRMLL 302 Query 304 AKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERGTD 363 AKNPAGWQEA++M+D A+G+VIAVNG+VPDGEDLSWLWDV+FE FE +VVA+GERG D Sbjct 303 AKNPAGWQEAMSMIDGTAEGLVIAVNGQVPDGEDLSWLWDVQFERFENGKVVASGERGAD 362 Query 364 LAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARR 412 LAVRL YAG EH+LV D VAAIASCPPGRVEV+ANYTAF L AL R Sbjct 363 LAVRLTYAGAEHSLVADPVAAIASCPPGRVEVLANYTAFRDLNTALEGR 411 >gi|262200461|ref|YP_003271669.1| hypothetical protein Gbro_0442 [Gordonia bronchialis DSM 43247] gi|262083808|gb|ACY19776.1| domain of unknown function DUF1727 [Gordonia bronchialis DSM 43247] Length=425 Score = 518 bits (1334), Expect = 8e-145, Method: Compositional matrix adjust. Identities = 267/389 (69%), Positives = 311/389 (80%), Gaps = 5/389 (1%) Query 24 GRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLGAVATNA 83 GRG G+MIGGLVA +D I+R+L G+RT V+TGTNGKSTTTRMTAAAL +G VAT A Sbjct 32 GRGKGSMIGGLVAAKIDPDIMRRLAAGKRTAVITGTNGKSTTTRMTAAALAEIGEVATQA 91 Query 84 EGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLDRVGEIN 143 +GANMDAG++A L R A + LEVDE+HVPH+SDAVDP V+VLLNLSRDQLDRVGEIN Sbjct 92 DGANMDAGIIATLTLQRTAPVCALEVDELHVPHVSDAVDPEVLVLLNLSRDQLDRVGEIN 151 Query 144 VIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCPRSGEVI 203 +IER LR G+ARHP+ VVANCDDVL+TSAA+D+P+VVWVAAG +W DSVSCPR+GE I Sbjct 152 MIERRLREGIARHPETTVVANCDDVLVTSAAFDAPHVVWVAAGASWVGDSVSCPRTGEPI 211 Query 204 VRKAPSQEDHWYSTG-ADFKRPAPHWWFDDATLYGPDGLALPMRLALPGSVNRGNAAQAV 262 +R E WYSTG +F+RP P WW D+ +YGP+G P+ L++PG NRGNAAQAV Sbjct 212 MRS----EHGWYSTGDENFRRPTPDWWVDEKNIYGPNGFQAPLDLSVPGRANRGNAAQAV 267 Query 263 AAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEALAMVDKHAD 322 AAAVA+GADPA AVAAV V EVAGRY ++G H R LLAKNPAGWQEAL+M+D+ AD Sbjct 268 AAAVAMGADPAKAVAAVGTVGEVAGRYGVHQVGNHSVRTLLAKNPAGWQEALSMIDQDAD 327 Query 323 GVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERGTDLAVRLGYAGVEHTLVHDTV 382 G+VIAVNG+VPDGEDLSWLWDVRFE FE VVAAGER DL+VRL YAG EHT + D + Sbjct 328 GLVIAVNGQVPDGEDLSWLWDVRFEAFETMAVVAAGERAADLSVRLLYAGAEHTTLPDPM 387 Query 383 AAIASCPPGRVEVVANYTAFLQLQRALAR 411 AIASCPPGRVEV+ANYTAF L AL R Sbjct 388 RAIASCPPGRVEVLANYTAFRDLGIALER 416 >gi|326383520|ref|ZP_08205206.1| hypothetical protein SCNU_11305 [Gordonia neofelifaecis NRRL B-59395] gi|326197604|gb|EGD54792.1| hypothetical protein SCNU_11305 [Gordonia neofelifaecis NRRL B-59395] Length=427 Score = 517 bits (1332), Expect = 1e-144, Method: Compositional matrix adjust. Identities = 265/391 (68%), Positives = 308/391 (79%), Gaps = 5/391 (1%) Query 24 GRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLGAVATNA 83 GRG G+MIGGLVA +D I+ +L G+ ++TGTNGKSTTTRMTAAAL LG VAT A Sbjct 29 GRGKGSMIGGLVAEKIDPRIMSRLAAGKSVALITGTNGKSTTTRMTAAALAGLGDVATQA 88 Query 84 EGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLDRVGEIN 143 +GANMDAG++A L+ +DA +A LEVDE+HV H++D P V LLNLSRDQLDRVGEIN Sbjct 89 DGANMDAGIIATLSLQQDAPVAALEVDELHVAHVADNTAPRVFTLLNLSRDQLDRVGEIN 148 Query 144 VIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCPRSGEVI 203 +IE++LR G+ARHPDAVVVANCDDVL+TSAA+D+P+VVWVAAG +W DSVSCPRSGE I Sbjct 149 IIEQSLRGGIARHPDAVVVANCDDVLVTSAAFDAPHVVWVAAGASWVGDSVSCPRSGEPI 208 Query 204 VRKAPSQEDHWYSTGAD-FKRPAPHWWFDDATLYGPDGLALPMRLALPGSVNRGNAAQAV 262 +R D WYSTG + F+RP P WWFDD LYGPDG PM L +PG NRGNAAQAV Sbjct 209 IRNG----DDWYSTGDEAFRRPTPQWWFDDENLYGPDGFIAPMTLKVPGRANRGNAAQAV 264 Query 263 AAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEALAMVDKHAD 322 A AVA+GADPA AV AV V EVAGRY TV + + R LLAKNPAGWQEAL+M+D AD Sbjct 265 ATAVAMGADPASAVRAVGTVGEVAGRYGTVELNGRRIRTLLAKNPAGWQEALSMIDATAD 324 Query 323 GVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERGTDLAVRLGYAGVEHTLVHDTV 382 +VIAVNG+VPDGEDLSWLWDVRFE FE+ +V+A+GER DL+VRL YAG EHT+V D Sbjct 325 SLVIAVNGQVPDGEDLSWLWDVRFEAFEQVKVIASGERAADLSVRLLYAGAEHTVVDDPF 384 Query 383 AAIASCPPGRVEVVANYTAFLQLQRALARRG 413 AAIASCPPGRVEV+ANYTAF L AL R G Sbjct 385 AAIASCPPGRVEVLANYTAFRDLGVALERAG 415 >gi|226363555|ref|YP_002781337.1| hypothetical protein ROP_41450 [Rhodococcus opacus B4] gi|226242044|dbj|BAH52392.1| hypothetical protein [Rhodococcus opacus B4] Length=417 Score = 517 bits (1332), Expect = 1e-144, Method: Compositional matrix adjust. Identities = 286/411 (70%), Positives = 333/411 (82%), Gaps = 4/411 (0%) Query 2 VTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNG 61 +TTR +LAL A A A WAS+ GRG G+MIGGL+A+ +D +++ QLG RRT V+TGTNG Sbjct 7 ITTRGKLALRAAAAASWASQKAGRGKGSMIGGLIALKIDPTLMEQLGARRRTAVITGTNG 66 Query 62 KSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAV 121 KSTTTRMTAAAL TLG VAT A+GANMDAG+VAAL+ A LA LEVDE+HVPH+SDAV Sbjct 67 KSTTTRMTAAALSTLGEVATQADGANMDAGIVAALSTRVHAPLAALEVDELHVPHVSDAV 126 Query 122 DPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVV 181 +P +VLLNLSRDQLDRVGEIN+IER LRA +A HP++VV+ANCDDVL+TS AYD+ NVV Sbjct 127 NPEALVLLNLSRDQLDRVGEINMIERKLRACVAAHPESVVIANCDDVLVTSVAYDAKNVV 186 Query 182 WVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDGL 241 WVAAGG W++D+ SCPR+GE IV + HW STG+DF RP P WW DD LYGPDGL Sbjct 187 WVAAGGGWASDAASCPRTGEPIVWEG----SHWRSTGSDFARPTPDWWLDDENLYGPDGL 242 Query 242 ALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARI 301 +PM LALPG NRGNAAQAVAAAVA+GA+ AVAA V EVAGRY TV +G+H + Sbjct 243 KIPMTLALPGRANRGNAAQAVAAAVAMGAEAEDAVAAAATVQEVAGRYSTVEVGSHSVHM 302 Query 302 LLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERG 361 LLAKNPAGWQEAL+M+D DG+VIAVNG+VPDGEDLSWLWDVRFEHFE +VVAAGERG Sbjct 303 LLAKNPAGWQEALSMIDPTVDGLVIAVNGQVPDGEDLSWLWDVRFEHFEGVKVVAAGERG 362 Query 362 TDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARR 412 TDLAVRL YAGVEHTL + + AIASCPPGRVEV+ANYTAF L A+A+ Sbjct 363 TDLAVRLTYAGVEHTLDPNPLRAIASCPPGRVEVLANYTAFRDLNTAIAKE 413 >gi|319950860|ref|ZP_08024743.1| hypothetical protein ES5_14668 [Dietzia cinnamea P4] gi|319435473|gb|EFV90710.1| hypothetical protein ES5_14668 [Dietzia cinnamea P4] Length=450 Score = 479 bits (1233), Expect = 4e-133, Method: Compositional matrix adjust. Identities = 268/418 (65%), Positives = 311/418 (75%), Gaps = 6/418 (1%) Query 2 VTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNG 61 +T R R A+A A WASRV+GRG+G MIGGLVA+ LD ++RQL GRRTV+VTGTNG Sbjct 9 LTPRGRAAVAVSRLATWASRVSGRGSGGMIGGLVALRLDPGLMRQLAAGRRTVLVTGTNG 68 Query 62 KSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAV 121 KSTTTRM A+AL T+G VA+N G NMDAG+V+AL A A LA +EVDE+H P +++ Sbjct 69 KSTTTRMVASALSTVGRVASNTGGDNMDAGIVSALVADSVAGLAAIEVDELHTPAVAENT 128 Query 122 DPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVV 181 P +VLLNLSRDQLDRVGEIN IER LRAG+A P A VVANCDDV++TS AYD+P VV Sbjct 129 SPEAIVLLNLSRDQLDRVGEINAIERRLRAGVAAQPQATVVANCDDVMITSVAYDNPEVV 188 Query 182 WVAAGGAWSNDSVSCPRSGEVIVRKA-PSQEDHWYSTGA-----DFKRPAPHWWFDDATL 235 WVAAG AW+ DSVSCPR+GE I R + W STG +F RP P WW DD + Sbjct 189 WVAAGSAWAGDSVSCPRTGEPITRTIDETGAVRWRSTGTLPDGREFARPEPDWWVDDEAI 248 Query 236 YGPDGLALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIG 295 +GPDG P+ LA+PG NRGNAAQAVAAAVA+GADPA AV AV QVD+VAGRY TV + Sbjct 249 HGPDGFTAPLSLAIPGRANRGNAAQAVAAAVAMGADPAAAVRAVEQVDDVAGRYSTVDVD 308 Query 296 AHQARILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVV 355 A +LLAKNPAGWQEAL M+D ADG+VIAVNG+V DG DLSWLWDVRFE FE V Sbjct 309 GRSAHLLLAKNPAGWQEALGMIDTSADGLVIAVNGQVADGVDLSWLWDVRFESFEGVTVY 368 Query 356 AAGERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 413 A+GER DL+VRL YAGV H L D +AAI CPPGRVEV+ANYTAF L RA+A G Sbjct 369 ASGERAADLSVRLTYAGVRHELEPDPLAAIRRCPPGRVEVLANYTAFRDLGRAMAAAG 426 >gi|300780021|ref|ZP_07089877.1| murein peptide ligase [Corynebacterium genitalium ATCC 33030] gi|300534131|gb|EFK55190.1| murein peptide ligase [Corynebacterium genitalium ATCC 33030] Length=426 Score = 451 bits (1160), Expect = 1e-124, Method: Compositional matrix adjust. Identities = 259/409 (64%), Positives = 301/409 (74%), Gaps = 7/409 (1%) Query 5 RARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKST 64 R+R A++A A ASR TGRGAG MIGGLVA +D +IL L GR T++VTGTNGKST Sbjct 20 RSRAAVSAAKLATTASRATGRGAGGMIGGLVAGVIDPNILEGLA-GRPTILVTGTNGKST 78 Query 65 TTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPA 124 TT M AAAL T VATN G NMDAG+++AL A A VLEVDE+HVP I+D + P Sbjct 79 TTGMLAAALRTKYTVATNDGGDNMDAGIISALLADGAASHVVLEVDELHVPAIADRLKPE 138 Query 125 VVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVA 184 +VLLNLSRDQLDRVGEIN IER LR + +HP+ V+ANCDDVLMTS A D+PNVVWV+ Sbjct 139 ALVLLNLSRDQLDRVGEINAIERALRGCVEKHPEMTVIANCDDVLMTSVALDAPNVVWVS 198 Query 185 AGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDGLALP 244 AG W DSVS PR IVR ED WY+T DF+RP+P W D L GPDG P Sbjct 199 AGAGWLGDSVSNPRGAGHIVR----DEDDWYATTGDFRRPSPDWAVTDEGLTGPDG-TYP 253 Query 245 MRLALPGSVNRGNAAQAVAAAVA-LGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILL 303 + LALPG NRGNAAQAVAAAV G D A+AA +D+VAGRY T+ +G H AR+LL Sbjct 254 LELALPGRANRGNAAQAVAAAVEAFGVDEDAAIAATESIDDVAGRYTTITVGDHHARLLL 313 Query 304 AKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERGTD 363 AKNPAGWQEAL+MVD+ ADG+VIAVNG+ DGEDLSWLWDV+FE FE V AAGERGTD Sbjct 314 AKNPAGWQEALSMVDRDADGLVIAVNGQQGDGEDLSWLWDVKFEDFEGMSVKAAGERGTD 373 Query 364 LAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARR 412 LAVRL YAG++H L+HD V AI +CPPGRVEV+ANYTA L L+ AL + Sbjct 374 LAVRLLYAGIDHELIHDPVKAIQACPPGRVEVLANYTALLNLKNALTKE 422 >gi|38232886|ref|NP_938653.1| hypothetical protein DIP0263 [Corynebacterium diphtheriae NCTC 13129] gi|38199144|emb|CAE48768.1| Conserved hypothetical protein [Corynebacterium diphtheriae] Length=420 Score = 451 bits (1159), Expect = 2e-124, Method: Compositional matrix adjust. Identities = 247/412 (60%), Positives = 299/412 (73%), Gaps = 11/412 (2%) Query 5 RARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKST 64 R RLA+ A A A ASR TGRG+G MIGGL+A +D +I++ L R T +VTGTNGKST Sbjct 6 RTRLAIGAAAVATTASRATGRGSGGMIGGLIAEKIDPNIMQSLAKTRPTALVTGTNGKST 65 Query 65 TTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPA 124 TTRM A+A+ VATN G NMDAG+++AL A + A VLEVDE+HVP +D + P Sbjct 66 TTRMLASAVRAQHTVATNEGGDNMDAGIISALMAGQSASHVVLEVDELHVPSAADRLHPQ 125 Query 125 VVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVA 184 ++LLNL+RDQLDRVGEIN IER LR + HPD V+ANCDDVL+TS AYD+PNVVWV+ Sbjct 126 CLILLNLTRDQLDRVGEINKIERALRDCVTAHPDMTVIANCDDVLVTSVAYDAPNVVWVS 185 Query 185 AGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYST-----GADFKRPAPHWWFD-DATLYGP 238 AG W+ DSVSCPR+G IVR Q+DHWY+T G F+RP P W D L Sbjct 186 AGAGWTGDSVSCPRTGSHIVR----QDDHWYATKPLPNGETFQRPTPAWTITPDGILTPG 241 Query 239 DGLALPMRLALPGSVNRGNAAQAVAAAVALGADPA-VAVAAVCQVDEVAGRYRTVRIGAH 297 +P+ LALPG+ NRGNA QA+AAAV P AV AV VD+VAGRY T+ +G H Sbjct 242 HAEPVPLSLALPGNANRGNATQAIAAAVTCFNVPLDDAVRAVETVDDVAGRYSTITLGEH 301 Query 298 QARILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAA 357 Q +LLAKNPAGWQEAL+MVD+ A+G+VIAVNG+V DGEDLSWLWDV+FE E+ V AA Sbjct 302 QIHLLLAKNPAGWQEALSMVDRTAEGLVIAVNGQVADGEDLSWLWDVKFEELEELSVKAA 361 Query 358 GERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRAL 409 GERGTDL+VRL YA V+H LV D +AAI +CP GRVEV+ANYTAF L+RA+ Sbjct 362 GERGTDLSVRLTYASVDHELVRDPLAAIKACPAGRVEVLANYTAFRDLKRAI 413 >gi|334564145|ref|ZP_08517136.1| putative UDP-N-acetylmuramyl tripeptide synthase [Corynebacterium bovis DSM 20582] Length=432 Score = 447 bits (1151), Expect = 1e-123, Method: Compositional matrix adjust. Identities = 243/391 (63%), Positives = 287/391 (74%), Gaps = 7/391 (1%) Query 30 MIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLGAVATNAEGANMD 89 MIGGLVA +D +L QLG GR +VTGTNGKSTTTRM A A+ T VATN G NMD Sbjct 1 MIGGLVAGAIDPDLLAQLGQGRPCAIVTGTNGKSTTTRMLAEAVRTRRTVATNEGGDNMD 60 Query 90 AGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLDRVGEINVIERTL 149 AG+++AL A RD E VLEVDE+HVP I+D ++ +VLLNLSRDQLDRVGEI IER+L Sbjct 61 AGVISALLAGRDRETLVLEVDELHVPSIADRLNCDTLVLLNLSRDQLDRVGEITKIERSL 120 Query 150 RAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCPRSGEVIVRKAPS 209 RA + PD V+ANCDDV +TS A+D PNVVWV+AGG+W+ DS SCPR+G ++R+ Sbjct 121 RACVEARPDMTVIANCDDVQVTSVAWDCPNVVWVSAGGSWAGDSASCPRTGGAVIRETDD 180 Query 210 QED--HWYS-----TGADFKRPAPHWWFDDATLYGPDGLALPMRLALPGSVNRGNAAQAV 262 WY+ TG +F+RP P W L PDG LPM+L LPG NRGNAA+A+ Sbjct 181 AGHLVDWYAVKPLPTGREFRRPTPEWVIGPDGLTTPDGDVLPMQLKLPGDANRGNAAEAI 240 Query 263 AAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEALAMVDKHAD 322 AAAVA+G D A+AAV +VD VAGRY TV I + +LLAKNPAGWQEAL+MVD+ AD Sbjct 241 AAAVAMGVDRTDALAAVERVDSVAGRYSTVEIDGRRVHMLLAKNPAGWQEALSMVDRSAD 300 Query 323 GVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERGTDLAVRLGYAGVEHTLVHDTV 382 G+VI+VNG+V DGEDLSWLWDVRFE+ VVAAGERGTDL VRLGYAG+ H LV DTV Sbjct 301 GLVISVNGQVADGEDLSWLWDVRFENLGGLHVVAAGERGTDLGVRLGYAGITHELVVDTV 360 Query 383 AAIASCPPGRVEVVANYTAFLQLQRALARRG 413 AI CPPGRVEV+ANYTAF L+RAL R G Sbjct 361 EAIRHCPPGRVEVLANYTAFRDLRRALDRAG 391 >gi|336326611|ref|YP_004606577.1| UDP-N-acetylmuramate-L-alanine ligase [Corynebacterium resistens DSM 45100] gi|336102593|gb|AEI10413.1| UDP-N-acetylmuramate-L-alanine ligase [Corynebacterium resistens DSM 45100] Length=477 Score = 444 bits (1142), Expect = 1e-122, Method: Compositional matrix adjust. Identities = 249/419 (60%), Positives = 298/419 (72%), Gaps = 11/419 (2%) Query 2 VTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNG 61 ++ R+R+A AA A WASR TGRGAG MIGGL+A +D ++L LG R ++TGTNG Sbjct 19 MSLRSRVATAAADAATWASRKTGRGAGGMIGGLIAGAIDPNLLTNLGGDRPVALITGTNG 78 Query 62 KSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAV 121 KSTTTRM AA+ T +V TN G NMDAG+++AL A RDA+ VLEVDE+HVP I++ + Sbjct 79 KSTTTRMMTAAVRTATSVCTNEGGDNMDAGVISALLAGRDADSVVLEVDELHVPSIAEKL 138 Query 122 DPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVV 181 D V+VLLNLSRDQLDRVGEIN IER LRA + P VVANCDDV +TS A+DSPNVV Sbjct 139 DADVLVLLNLSRDQLDRVGEINKIERALRACVEARPSMTVVANCDDVQVTSVAWDSPNVV 198 Query 182 WVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYST-----GADFKRPAPHWWFDDATLY 236 WV+AG W DS SCPR+G I++ WY+T G +F+RPAP W L Sbjct 199 WVSAGAGWVGDSTSCPRTGGSIIQDG----QDWYATKKLPDGREFRRPAPEWTVTPDGLR 254 Query 237 GPDGLALPMRLALPGSVNRGNAAQAVAAAVALG--ADPAVAVAAVCQVDEVAGRYRTVRI 294 P G P+ L LPG NRGNA QA+ A+ L D A A+ + +VD VAGRY TV+ Sbjct 255 DPHGNVHPLNLTLPGDANRGNALQALVGALKLNPAVDVAPAIEQIEKVDNVAGRYSTVQF 314 Query 295 GAHQARILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRV 354 G HQ R++LAKNPAGWQEAL+MVD+ AD +VI+VNG+V DG+DLSWLWDV+FE FE V Sbjct 315 GQHQVRLMLAKNPAGWQEALSMVDRTADSLVISVNGQVADGQDLSWLWDVKFEKFESQYV 374 Query 355 VAAGERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARRG 413 VAAGERGTDLAVRLGYA V H LV DTV AI CPPGRVEV+ANYTAF L+R L R G Sbjct 375 VAAGERGTDLAVRLGYASVVHDLVKDTVEAIKQCPPGRVEVLANYTAFRDLKRVLDREG 433 >gi|296118027|ref|ZP_06836609.1| mur ligase family protein [Corynebacterium ammoniagenes DSM 20306] gi|295968913|gb|EFG82156.1| mur ligase family protein [Corynebacterium ammoniagenes DSM 20306] Length=425 Score = 439 bits (1129), Expect = 4e-121, Method: Compositional matrix adjust. Identities = 249/414 (61%), Positives = 301/414 (73%), Gaps = 11/414 (2%) Query 5 RARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKST 64 RA+ A+ A A +ASR TGRGAG MIGGLVA +D SI+ QL R V+VTGTNGKST Sbjct 13 RAKTAVTAAHLATFASRATGRGAGGMIGGLVARAIDPSIMTQLAGDRPAVIVTGTNGKST 72 Query 65 TTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPA 124 TTRM AAA+ + ++ATN G NMDAG+V+AL A DA VLEVDE+HVPH++DA++ Sbjct 73 TTRMLAAAMRSKYSIATNDGGDNMDAGIVSALMAGEDASHIVLEVDELHVPHVADALNTQ 132 Query 125 VVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVA 184 +VLLNLSRDQLDRVGEIN IER LR + +PD +V+ANCDDVLM+S AYD+PNVVWV+ Sbjct 133 ALVLLNLSRDQLDRVGEINKIERALRGAVEANPDMLVIANCDDVLMSSVAYDAPNVVWVS 192 Query 185 AGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYST-----GADFKRPAPHWWFDDATLYGPD 239 AG W DSVSCPR+G IVR ED WYS G +F+RP P W DD ++ P Sbjct 193 AGAGWLGDSVSCPRTGGHIVR----TEDDWYSVKKLADGREFRRPQPSWAVDDKGVFSPA 248 Query 240 GLALPMRLALPGSVNRGNAAQAVAAAV-ALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQ 298 G + LALPG NRGNAAQA+AAAV D A A +V +VAGRY T+ G H+ Sbjct 249 G-DKELNLALPGRANRGNAAQAIAAAVEGFAVDVDEATVAAEKVADVAGRYSTIHRGEHE 307 Query 299 ARILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAG 358 R+LLAKNPAGWQEAL+M+D+ ADG+VIA NG+V DG D+SWLWDV+FE F+ V AAG Sbjct 308 IRLLLAKNPAGWQEALSMIDRSADGLVIATNGQVADGVDMSWLWDVKFEDFDDLSVKAAG 367 Query 359 ERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARR 412 ERGTDLAVRL YA + H L+ D V AI +CPPGRVEV+ANYTAF L++AL R+ Sbjct 368 ERGTDLAVRLVYADITHELIPDPVEAIDACPPGRVEVLANYTAFRDLKKALERQ 421 >gi|25026769|ref|NP_736823.1| hypothetical protein CE0213 [Corynebacterium efficiens YS-314] gi|259508094|ref|ZP_05750994.1| mur ligase family protein [Corynebacterium efficiens YS-314] gi|23492048|dbj|BAC17023.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259164317|gb|EEW48871.1| mur ligase family protein [Corynebacterium efficiens YS-314] Length=423 Score = 437 bits (1125), Expect = 1e-120, Method: Compositional matrix adjust. Identities = 243/412 (59%), Positives = 293/412 (72%), Gaps = 10/412 (2%) Query 5 RARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKST 64 R R A+ A A ASR+TGRG+G MIGGLVA +D I+ L R +VTGTNGKST Sbjct 13 RTRAAMTAAYLATTASRITGRGSGGMIGGLVANAVDPEIMATLAADRPVALVTGTNGKST 72 Query 65 TTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPA 124 TTRM AAA+ +ATN G NMDAG+++AL A R+A VLEVDE+HVP + P+ Sbjct 73 TTRMLAAAMRRQFTIATNEGGDNMDAGIISALLAGREASHVVLEVDELHVPAAITHLQPS 132 Query 125 VVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVA 184 +VLLNLSRDQLDRVGEIN IER LR + +PD +VVANCDDVL+TS A+D+PNV+WVA Sbjct 133 CLVLLNLSRDQLDRVGEINKIERVLRDAVRSNPDMIVVANCDDVLVTSIAFDAPNVIWVA 192 Query 185 AGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYST-----GADFKRPAPHWWFDDATLYGPD 239 AG W D+VSCPR+ IV + +HW +T G F+RP P W D T++ P+ Sbjct 193 AGSGWQGDAVSCPRTESRIVYEG----NHWRATRELLDGRTFERPTPTWAVDGDTVHTPE 248 Query 240 GLALPMRLALPGSVNRGNAAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQA 299 G + + L LPG NRGNAAQA+ AA G A AV AV VD VAGRY T+ G H+ Sbjct 249 GDVV-LDLNLPGQANRGNAAQAICAATVYGVPLAEAVDAVNSVDNVAGRYSTITYGDHEV 307 Query 300 RILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGE 359 +LLAKNPAGWQEALAMVD+ ADG+VIAVNG+V DGEDLSWLWDVRFE FE+ V A+GE Sbjct 308 HLLLAKNPAGWQEALAMVDRTADGLVIAVNGQVADGEDLSWLWDVRFEDFEQLSVKASGE 367 Query 360 RGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALAR 411 RGTDLAVRL YA ++H L D +AAI +CPPGRVEV+ANYTAF L+RAL + Sbjct 368 RGTDLAVRLTYANIDHDLHRDPLAAIRACPPGRVEVLANYTAFRDLKRALEK 419 >gi|296395022|ref|YP_003659906.1| hypothetical protein Srot_2641 [Segniliparus rotundus DSM 44985] gi|296182169|gb|ADG99075.1| domain of unknown function DUF1727 [Segniliparus rotundus DSM 44985] Length=427 Score = 432 bits (1111), Expect = 5e-119, Method: Compositional matrix adjust. Identities = 241/388 (63%), Positives = 284/388 (74%), Gaps = 6/388 (1%) Query 20 SRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKSTTTRMTAAALGTLGAV 79 SR GRG G++IGG + + SIL QL G+RTV+VTGTNGKSTTTRM +AL LG V Sbjct 29 SRTAGRGEGSVIGGRITGRIAPSILSQLAAGKRTVLVTGTNGKSTTTRMIVSALAELGEV 88 Query 80 ATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPAVVVLLNLSRDQLDRV 139 +TN++G+NMDAGL+AALAA R A AVLEVDE+H+ ++ AV PAVVVLLNLSRDQLDRV Sbjct 89 STNSQGSNMDAGLIAALAAGRKAPYAVLEVDELHLAAVAKAVQPAVVVLLNLSRDQLDRV 148 Query 140 GEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVAAGGAWSNDSVSCPRS 199 GEI +ER+LR GLA P+ VV+ANCDDVL+TS AYD+PNVVWVAAGG W DSVSCPR+ Sbjct 149 GEIGKVERSLRVGLAGLPETVVIANCDDVLVTSVAYDAPNVVWVAAGGTWQGDSVSCPRT 208 Query 200 GEVIVRKAPSQEDHWYSTGADFKRPAPHWWFDDATLYGPDGLALPMRLALPGSVNRGNAA 259 G I R + W + F +P P W L GP GL LPMRL LPG+VNRGNAA Sbjct 209 GTRIARTG----EKWACSTGTFAKPEPQWLLRGDDLRGPSGLRLPMRLQLPGAVNRGNAA 264 Query 260 QAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARILLAKNPAGWQEALAMVDK 319 QAVAAAVALGADPA A+ + ++ EV GRY + R LLAKNPAGWQEAL+MV+ Sbjct 265 QAVAAAVALGADPARALREISELKEVGGRYGVHDVAGRAVRTLLAKNPAGWQEALSMVE- 323 Query 320 HADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERGTDLAVRLGYAGVEHTLVH 379 AD VVIAVNGRV DG DLSWLWDV FE +VVA+GER DL+VRL YAGV H Sbjct 324 -ADSVVIAVNGRVADGGDLSWLWDVPFEKLRGKKVVASGERAADLSVRLDYAGVAHEFCR 382 Query 380 DTVAAIASCPPGRVEVVANYTAFLQLQR 407 + A+ S P GRV+VVANYTAF++L+R Sbjct 383 NPFDALTSSPVGRVDVVANYTAFMELKR 410 >gi|227542722|ref|ZP_03972771.1| possible UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase [Corynebacterium glucuronolyticum ATCC 51866] gi|227181488|gb|EEI62460.1| possible UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase [Corynebacterium glucuronolyticum ATCC 51866] Length=418 Score = 432 bits (1110), Expect = 8e-119, Method: Compositional matrix adjust. Identities = 245/422 (59%), Positives = 291/422 (69%), Gaps = 21/422 (4%) Query 1 VVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 V T R RLA A A ASR TGRGAG MIGGLVA +D SI+ +LG GR +VTGTN Sbjct 7 VRTYRRRLARTAANVATTASRATGRGAGGMIGGLVANAIDPSIMNELGGGRPVALVTGTN 66 Query 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 GKSTTTRM AAL T V +N G NMDAG+++AL A DA VLE DE+HVPH+++ Sbjct 67 GKSTTTRMLTAALRTRYTVVSNEGGDNMDAGIISALLAGEDATHVVLECDELHVPHVAER 126 Query 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV 180 +D +VLLNLSRDQLDRVGEIN IER LRA + PD V+ANCDDVLMTS A+DSPNV Sbjct 127 LDAGCLVLLNLSRDQLDRVGEINKIERALRACVNARPDMTVIANCDDVLMTSVAWDSPNV 186 Query 181 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYS-----TGADFKRPAPHWWFDDATL 235 +WV+AG W DSVSCPR+G ++R WY+ G +F+RP P W L Sbjct 187 IWVSAGVGWLGDSVSCPRTGGAVIRDGWD----WYAVKKLPNGQEFRRPEPSW------L 236 Query 236 YGPDGLA-----LPMRLALPGSVNRGNAAQAVAAAVALGADPAV-AVAAVCQVDEVAGRY 289 P+G+ P+ L LPG+ NRGNA QA+AAAV+ P A A VD VAGRY Sbjct 237 ITPEGVTHAGNVTPLELQLPGNANRGNATQAIAAAVSCYDIPVEDAARATGTVDNVAGRY 296 Query 290 RTVRIGAHQARILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHF 349 T+ G HQ +LLAKNPAGWQEAL+MVD+ ADG+VIAVNG+V DGEDLSWLWDVRFE F Sbjct 297 STITHGEHQVHMLLAKNPAGWQEALSMVDRSADGLVIAVNGQVADGEDLSWLWDVRFESF 356 Query 350 EKTRVVAAGERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRAL 409 E V AAGER DL VRL Y G+EH + D +AAI +CPPG+VEV+ANYTAF L++AL Sbjct 357 EGIAVKAAGERSADLGVRLLYGGIEHETIPDPIAAIEACPPGKVEVLANYTAFRDLKKAL 416 Query 410 AR 411 + Sbjct 417 NK 418 >gi|227549655|ref|ZP_03979704.1| possible UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase [Corynebacterium lipophiloflavum DSM 44291] gi|227078279|gb|EEI16242.1| possible UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase [Corynebacterium lipophiloflavum DSM 44291] Length=426 Score = 431 bits (1108), Expect = 1e-118, Method: Compositional matrix adjust. Identities = 244/414 (59%), Positives = 296/414 (72%), Gaps = 11/414 (2%) Query 5 RARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKST 64 R+R A+ A A ASR TGRGAG MIGGLVA +D SI++ L R V+VTGTNGKST Sbjct 13 RSRAAVTAARLATTASRATGRGAGGMIGGLVAGAIDPSIMQSLSGERPAVLVTGTNGKST 72 Query 65 TTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPA 124 TTRM A AL VATN G NMDAG+++AL A R+A VLEVDE+HVP ++D + P Sbjct 73 TTRMLAGALAVSHTVATNDGGDNMDAGIISALLAGRNASHVVLEVDELHVPKVADRLAPQ 132 Query 125 VVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVA 184 +VLLNLSRDQLDRVGEIN IER LR + HPD V+ANCDDVLMTS AYD PNVVWVA Sbjct 133 ALVLLNLSRDQLDRVGEINKIERALRGAVNAHPDMTVIANCDDVLMTSVAYDHPNVVWVA 192 Query 185 AGGAWSNDSVSCPRSGEVIVRKAPSQEDHWY-----STGADFKRPAPHWWFDDATLYGPD 239 AG W DSV+ PRSG +V+ + WY + G +F+RP P +W + ATL+ P Sbjct 193 AGAGWLGDSVTNPRSGGHVVQA----DGDWYGVEKLADGREFRRPEPAYWLEGATLHTPH 248 Query 240 GLALPMRLALPGSVNRGN-AAQAVAAAVALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQ 298 G + ++L++PG N GN A AA A G AV A VD VAGRY +V +G + Sbjct 249 G-STELKLSIPGRANLGNAAQAIAAAVEAFGVPFDKAVRATEAVDNVAGRYSSVHLGERE 307 Query 299 ARILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAG 358 +LLAKNPAGWQEAL+MVD+ ADG+VIA NG+V DGEDLSWLWDV+FE FE +VVAAG Sbjct 308 VHLLLAKNPAGWQEALSMVDRSADGLVIATNGQVADGEDLSWLWDVKFEDFEGLKVVAAG 367 Query 359 ERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARR 412 ERGTDLAVRL YAG+EH+L+HD + AI +CPPGRVEV+ANYTAF L++ LA++ Sbjct 368 ERGTDLAVRLLYAGIEHSLIHDPIDAIRACPPGRVEVLANYTAFRDLKKDLAKQ 421 >gi|227487301|ref|ZP_03917617.1| possible UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092727|gb|EEI28039.1| possible UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase [Corynebacterium glucuronolyticum ATCC 51867] Length=418 Score = 430 bits (1106), Expect = 2e-118, Method: Compositional matrix adjust. Identities = 245/422 (59%), Positives = 290/422 (69%), Gaps = 21/422 (4%) Query 1 VVTTRARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTN 60 V T R RLA A A ASR TGRGAG MIGGLVA +D SI+ LG GR +VTGTN Sbjct 7 VRTYRRRLARTAANLATTASRATGRGAGGMIGGLVANAIDPSIMNDLGGGRPVALVTGTN 66 Query 61 GKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDA 120 GKSTTTRM AAL T V +N G NMDAG+++AL A DA VLE DE+HVPH+++ Sbjct 67 GKSTTTRMLTAALRTRYTVVSNEGGDNMDAGIISALLAGEDATHVVLECDELHVPHVAER 126 Query 121 VDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNV 180 +D +VLLNLSRDQLDRVGEIN IER LRA + PD V+ANCDDVLMTS A+DSPNV Sbjct 127 LDAGCLVLLNLSRDQLDRVGEINKIERALRACVNARPDMTVIANCDDVLMTSVAWDSPNV 186 Query 181 VWVAAGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYS-----TGADFKRPAPHWWFDDATL 235 +WV+AG W DSVSCPR+G ++R WY+ G +F+RP P W L Sbjct 187 IWVSAGVGWLGDSVSCPRTGGAVIRDGWD----WYAVKKLPNGQEFRRPEPSW------L 236 Query 236 YGPDGLA-----LPMRLALPGSVNRGNAAQAVAAAVALGADPAV-AVAAVCQVDEVAGRY 289 P+G+ P+ L LPG+ NRGNA QA+AAAV+ P A A VD VAGRY Sbjct 237 ITPEGVTHAGNVTPLELQLPGNANRGNATQAIAAAVSCYDIPVEDAARATGTVDNVAGRY 296 Query 290 RTVRIGAHQARILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHF 349 T+ G HQ +LLAKNPAGWQEAL+MVD+ ADG+VIAVNG+V DGEDLSWLWDVRFE F Sbjct 297 STITHGEHQVHMLLAKNPAGWQEALSMVDRSADGLVIAVNGQVADGEDLSWLWDVRFESF 356 Query 350 EKTRVVAAGERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRAL 409 E V AAGER DL VRL Y G+EH + D +AAI +CPPG+VEV+ANYTAF L++AL Sbjct 357 EGIAVKAAGERSADLGVRLLYGGIEHETIPDPIAAIEACPPGKVEVLANYTAFRDLKKAL 416 Query 410 AR 411 + Sbjct 417 NK 418 >gi|225020188|ref|ZP_03709380.1| hypothetical protein CORMATOL_00190 [Corynebacterium matruchotii ATCC 33806] gi|224946932|gb|EEG28141.1| hypothetical protein CORMATOL_00190 [Corynebacterium matruchotii ATCC 33806] Length=425 Score = 430 bits (1106), Expect = 2e-118, Method: Compositional matrix adjust. Identities = 234/411 (57%), Positives = 291/411 (71%), Gaps = 3/411 (0%) Query 5 RARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKST 64 R R A+ A +ASR TGRG+G MIGGLVA +D I++ LG GR ++TGTNGKST Sbjct 9 RTRAAIGLARLATFASRATGRGSGGMIGGLVAEKIDPQIMKNLGFGRPVALITGTNGKST 68 Query 65 TTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPA 124 TTRM A A+ + VATN G NMDAG++ AL A ++A VLE DE+HVP ++D + P+ Sbjct 69 TTRMLATAIRSAHQVATNEGGDNMDAGIITALMAGQEASHVVLECDELHVPSVADRLQPS 128 Query 125 VVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVA 184 +VLLNLSRDQLDRVGEIN IER LR + HP+ V+ANCDDVL+TS A+++ NVVWV+ Sbjct 129 CLVLLNLSRDQLDRVGEINKIERALRQCVLNHPNMTVIANCDDVLVTSVAWEAKNVVWVS 188 Query 185 AGGAWSNDSVSCPRSGEVIVRKAPSQED--HWYSTGADFKRPAPHWWFDDATLYGPDGLA 242 AG W DSVSCPR+G I+ + + G F+RP P W ++ P Sbjct 189 AGAGWKGDSVSCPRTGGRIIHHPDGTWEAVQPLADGTIFRRPEPTWTITPEGIHTPTNDI 248 Query 243 LPMRLALPGSVNRGNAAQAVAAAV-ALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARI 301 P+ L LPG+ NRGNA QAVAAAV G VAV+AV VD+VAGRY T+R+G + Sbjct 249 APLALKLPGTANRGNATQAVAAAVECFGIPLDVAVSAVETVDDVAGRYSTLRLGNRDIHL 308 Query 302 LLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERG 361 LLAKNPAGWQEA++MVD+ ADG+VIAVNG+V DGEDLSWLWDVRFE F + V A+GERG Sbjct 309 LLAKNPAGWQEAMSMVDRTADGLVIAVNGQVADGEDLSWLWDVRFEDFGELAVKASGERG 368 Query 362 TDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARR 412 TDLAVRL YA ++H LVH+ + A+ +CP GRVEV+ANYTAF L+RAL RR Sbjct 369 TDLAVRLTYADIQHELVHNMMDAVLACPEGRVEVLANYTAFRDLKRALVRR 419 >gi|68537102|ref|YP_251807.1| putative UDP-N-acetylmuramyl tripeptide synthase [Corynebacterium jeikeium K411] gi|260579447|ref|ZP_05847328.1| mur ligase family protein [Corynebacterium jeikeium ATCC 43734] gi|68264701|emb|CAI38189.1| putative UDP-N-acetylmuramyl tripeptide synthase [Corynebacterium jeikeium K411] gi|258602417|gb|EEW15713.1| mur ligase family protein [Corynebacterium jeikeium ATCC 43734] Length=476 Score = 429 bits (1103), Expect = 4e-118, Method: Compositional matrix adjust. Identities = 248/426 (59%), Positives = 298/426 (70%), Gaps = 17/426 (3%) Query 5 RARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMG-----RRTVVVTGT 59 R+ +A+ A WASR GRGAG MIGGLV +D ++ LG G R TV+VTGT Sbjct 49 RSSVAIRMAQLATWASRKAGRGAGGMIGGLVGGAIDPQLMASLGAGKDGKKRPTVLVTGT 108 Query 60 NGKSTTTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISD 119 NGKSTTTRM A+A+ T V TN G NMDAG+++AL A RDA+ VLEVDE+HVP I++ Sbjct 109 NGKSTTTRMLASAVRTAATVCTNEGGDNMDAGVISALLAGRDADAVVLEVDELHVPKIAE 168 Query 120 AVDPAVVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPN 179 +D V+VLLNLSRDQLDRVGEIN IER LRA + P+ V+ANCDDV +TS A+DSPN Sbjct 169 KLDADVLVLLNLSRDQLDRVGEINKIERALRACVEARPNMQVIANCDDVSITSVAWDSPN 228 Query 180 VVWVAAGGAWSNDSVSCPRS-GEVIVRKAPSQEDHWYST-----GADFKRPAPHWWFDDA 233 V WV+AG W+ DS SCPR+ G +I R W++ G +F+RP P W + Sbjct 229 VQWVSAGFGWAGDSTSCPRTEGAIIHRTGEDGVVDWFAAKKLPDGREFRRPQPDWRITEE 288 Query 234 TLYGPDGLALPMRLALPGSVNRGNAAQAVAAAVALGA------DPAVAVAAVCQVDEVAG 287 L +G PM L LPG+ NRGNA QAVAAAVAL A+AA +VD VAG Sbjct 289 GLIDREGKLHPMNLTLPGNANRGNATQAVAAAVALSELLPERISTEQAIAAAEKVDNVAG 348 Query 288 RYRTVRIGAHQARILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFE 347 RY V G H+ R++LAKNPAGWQEAL+MVD+ AD +VI+VNG+V DG+DLSWLWDVRFE Sbjct 349 RYSVVHFGNHEVRLMLAKNPAGWQEALSMVDRTADSLVISVNGQVADGQDLSWLWDVRFE 408 Query 348 HFEKTRVVAAGERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQR 407 +FE VVAAGERGTDLAVRLGYA VEH L+ DTV AI SCPPGRVEV+ANYTAF L+R Sbjct 409 NFEGVHVVAAGERGTDLAVRLGYAAVEHNLIKDTVEAIRSCPPGRVEVLANYTAFRDLKR 468 Query 408 ALARRG 413 L + G Sbjct 469 VLDKEG 474 >gi|305680073|ref|ZP_07402883.1| Mur ligase middle domain protein [Corynebacterium matruchotii ATCC 14266] gi|305660693|gb|EFM50190.1| Mur ligase middle domain protein [Corynebacterium matruchotii ATCC 14266] Length=425 Score = 429 bits (1102), Expect = 5e-118, Method: Compositional matrix adjust. Identities = 234/411 (57%), Positives = 290/411 (71%), Gaps = 3/411 (0%) Query 5 RARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKST 64 R R A+ A +ASR TGRG+G MIGGLVA +D I++ LG GR ++TGTNGKST Sbjct 9 RTRAAIGLARLATFASRATGRGSGGMIGGLVAEKIDPQIMKNLGFGRPVALITGTNGKST 68 Query 65 TTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPA 124 TTRM A A+ + VATN G NMDAG++ AL A ++A VLE DE+HVP ++D + P+ Sbjct 69 TTRMLATAIRSAHQVATNEGGDNMDAGIITALMAGQEASHVVLECDELHVPSVADRLQPS 128 Query 125 VVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVA 184 +VLLNLSRDQLDRVGEIN IER LR + HP V+ANCDDVL+TS A+++ NVVWV+ Sbjct 129 CLVLLNLSRDQLDRVGEINKIERALRQCVLNHPTMTVIANCDDVLVTSVAWEAKNVVWVS 188 Query 185 AGGAWSNDSVSCPRSGEVIVRKAPSQED--HWYSTGADFKRPAPHWWFDDATLYGPDGLA 242 AG W DSVSCPR+G I+ + + G F+RP P W ++ P Sbjct 189 AGAGWKGDSVSCPRTGGRIIHHPDGTWEAVQPLADGTIFRRPEPTWTITPEGIHTPTNDI 248 Query 243 LPMRLALPGSVNRGNAAQAVAAAV-ALGADPAVAVAAVCQVDEVAGRYRTVRIGAHQARI 301 P+ L LPG+ NRGNA QAVAAAV G VA++AV VD+VAGRY T+R+G + Sbjct 249 APLALKLPGTANRGNATQAVAAAVECFGIPLDVAMSAVETVDDVAGRYSTLRLGNRDIHL 308 Query 302 LLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVRFEHFEKTRVVAAGERG 361 LLAKNPAGWQEA++MVD+ ADG+VIAVNG+V DGEDLSWLWDVRFE F + V A+GERG Sbjct 309 LLAKNPAGWQEAMSMVDRTADGLVIAVNGQVADGEDLSWLWDVRFEDFGELAVKASGERG 368 Query 362 TDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQLQRALARR 412 TDLAVRL YA ++H LVH+ + AI +CP GRVEV+ANYTAF L+RAL RR Sbjct 369 TDLAVRLTYAEIQHELVHNMMDAILACPEGRVEVLANYTAFRDLKRALVRR 419 >gi|300857573|ref|YP_003782556.1| hypothetical protein cpfrc_00156 [Corynebacterium pseudotuberculosis FRC41] gi|300685027|gb|ADK27949.1| hypothetical protein cpfrc_00156 [Corynebacterium pseudotuberculosis FRC41] gi|302205312|gb|ADL09654.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Corynebacterium pseudotuberculosis C231] gi|302329866|gb|ADL20060.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Corynebacterium pseudotuberculosis 1002] gi|308275552|gb|ADO25451.1| UDP-N-acetyl muramyl tripeptide synthase [Corynebacterium pseudotuberculosis I19] gi|341823978|gb|AEK91499.1| UDP-N-acetylmuramoylalanine--D-glutamate ligase [Corynebacterium pseudotuberculosis PAT10] Length=431 Score = 428 bits (1101), Expect = 7e-118, Method: Compositional matrix adjust. Identities = 234/425 (56%), Positives = 293/425 (69%), Gaps = 23/425 (5%) Query 5 RARLALAAGAGARWASRVTGRGAGAMIGGLVAMTLDRSILRQLGMGRRTVVVTGTNGKST 64 R RLA+ A ASRVTGRG+G MIGGL+A +D +I+ LG R +VTGTNGKST Sbjct 6 RTRLAIGTAHLATTASRVTGRGSGGMIGGLIAEKIDPNIMASLGDDRPVALVTGTNGKST 65 Query 65 TTRMTAAALGTLGAVATNAEGANMDAGLVAALAAHRDAELAVLEVDEMHVPHISDAVDPA 124 TTRM A+A+ VATN G NMDAG+++AL A + A +LEVDE+HVP ++D + P+ Sbjct 66 TTRMLASAIRAQHTVATNEGGDNMDAGIISALMAGQKASHVILEVDELHVPAVADRLKPS 125 Query 125 VVVLLNLSRDQLDRVGEINVIERTLRAGLARHPDAVVVANCDDVLMTSAAYDSPNVVWVA 184 ++LLNL+RDQLDRVGEIN IER LR + +HP+ V+ANCDDVL+TS AYD+ NVVWV+ Sbjct 126 CLILLNLTRDQLDRVGEINKIERALRDCVTKHPEMTVIANCDDVLVTSIAYDAKNVVWVS 185 Query 185 AGGAWSNDSVSCPRSGEVIVRKAPSQEDHWYS-----TGADFKRPAPHWWFDDATLYGPD 239 AG W DSVSCPR+G +V WY+ G F+RP PHW + P Sbjct 186 AGAGWQGDSVSCPRTGGHVVHDGAD----WYAVKPLPNGEQFRRPTPHWSITAEGIVSPA 241 Query 240 GLA-------------LPMRLALPGSVNRGNAAQAVAAAVALGADP-AVAVAAVCQVDEV 285 + P+ LALPG+ NRGNA QAVAAAV P AV +V VD+V Sbjct 242 DIGSSTGSDAPMTQEVSPLNLALPGNANRGNATQAVAAAVECFQVPLNQAVRSVESVDDV 301 Query 286 AGRYRTVRIGAHQARILLAKNPAGWQEALAMVDKHADGVVIAVNGRVPDGEDLSWLWDVR 345 AGRY T+ +G HQ +LLAKNPAGWQEAL+MVD+ A+G+VIAVNG+V DGEDLSWLWDV+ Sbjct 302 AGRYSTITLGQHQIHLLLAKNPAGWQEALSMVDRTAEGLVIAVNGQVADGEDLSWLWDVK 361 Query 346 FEHFEKTRVVAAGERGTDLAVRLGYAGVEHTLVHDTVAAIASCPPGRVEVVANYTAFLQL 405 FE +K V A+GERGTDL+VRL YA VEH L+ + + AI +CP GRVEV+ANYTAF L Sbjct 362 FEELDKLSVKASGERGTDLSVRLTYASVEHELIKNPLQAIKACPAGRVEVLANYTAFRDL 421 Query 406 QRALA 410 ++A+A Sbjct 422 KKAIA 426 Lambda K H 0.319 0.132 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 828519148872 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40