BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3715c

Length=203
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15610851|ref|NP_218232.1|  recombination protein RecR [Mycobac...   400    7e-110
gi|289755846|ref|ZP_06515224.1|  recombination protein recr [Myco...   398    2e-109
gi|289759875|ref|ZP_06519253.1|  recombination protein recR [Myco...   396    8e-109
gi|41406414|ref|NP_959250.1|  recombination protein RecR [Mycobac...   383    8e-105
gi|254818509|ref|ZP_05223510.1|  recombination protein RecR [Myco...   382    2e-104
gi|342861918|ref|ZP_08718562.1|  recombination protein RecR [Myco...   380    8e-104
gi|240173344|ref|ZP_04752002.1|  recombination protein RecR [Myco...   378    2e-103
gi|296166809|ref|ZP_06849227.1|  recombination protein R [Mycobac...   377    6e-103
gi|15828252|ref|NP_302515.1|  recombination protein RecR [Mycobac...   374    6e-102
gi|120406470|ref|YP_956299.1|  recombination protein RecR [Mycoba...   373    1e-101
gi|183985200|ref|YP_001853491.1|  recombination protein RecR [Myc...   372    2e-101
gi|145221880|ref|YP_001132558.1|  recombination protein RecR [Myc...   370    5e-101
gi|108801866|ref|YP_642063.1|  recombination protein RecR [Mycoba...   370    6e-101
gi|118619460|ref|YP_907792.1|  recombination protein RecR [Mycoba...   369    1e-100
gi|118473908|ref|YP_890498.1|  recombination protein RecR [Mycoba...   369    2e-100
gi|333992643|ref|YP_004525257.1|  recombination protein RecR [Myc...   358    2e-97 
gi|312137878|ref|YP_004005214.1|  recombination protein recr [Rho...   351    3e-95 
gi|226303880|ref|YP_002763838.1|  recombination protein RecR [Rho...   348    2e-94 
gi|336441390|gb|AEI54920.1|  recombination protein [Mycobacterium...   348    3e-94 
gi|169627424|ref|YP_001701073.1|  recombination protein RecR [Myc...   348    3e-94 
gi|111021188|ref|YP_704160.1|  recombination protein RecR [Rhodoc...   348    4e-94 
gi|336441386|gb|AEI54918.1|  recombination protein [Mycobacterium...   346    9e-94 
gi|54022259|ref|YP_116501.1|  recombination protein RecR [Nocardi...   345    2e-93 
gi|257057602|ref|YP_003135434.1|  recombination protein RecR [Sac...   332    2e-89 
gi|333917901|ref|YP_004491482.1|  Recombination protein R [Amycol...   325    2e-87 
gi|300790713|ref|YP_003771004.1|  recombination protein RecR [Amy...   325    2e-87 
gi|291006687|ref|ZP_06564660.1|  recombination protein RecR [Sacc...   323    6e-87 
gi|302530932|ref|ZP_07283274.1|  recombination protein RecR [Stre...   323    7e-87 
gi|331694241|ref|YP_004330480.1|  Recombination protein recR [Pse...   323    7e-87 
gi|256374360|ref|YP_003098020.1|  recombination protein RecR [Act...   322    2e-86 
gi|325003633|ref|ZP_08124745.1|  recombination protein RecR [Pseu...   321    3e-86 
gi|296141675|ref|YP_003648918.1|  recombination protein RecR [Tsu...   314    4e-84 
gi|343926404|ref|ZP_08765909.1|  recombination protein RecR [Gord...   308    4e-82 
gi|317506737|ref|ZP_07964519.1|  recombination protein RecR [Segn...   307    6e-82 
gi|134096870|ref|YP_001102531.1|  recombination protein RecR [Sac...   306    9e-82 
gi|296393612|ref|YP_003658496.1|  recombination protein RecR [Seg...   306    1e-81 
gi|262200456|ref|YP_003271664.1|  recombination protein RecR [Gor...   301    3e-80 
gi|326383523|ref|ZP_08205209.1|  recombination protein RecR [Gord...   296    1e-78 
gi|258650921|ref|YP_003200077.1|  recombination protein RecR [Nak...   291    5e-77 
gi|297158533|gb|ADI08245.1|  recombination protein RecR [Streptom...   289    1e-76 
gi|337766940|emb|CCB75651.1|  DNA repair and recombination protei...   289    2e-76 
gi|297193078|ref|ZP_06910476.1|  recombination protein recR [Stre...   288    4e-76 
gi|302544192|ref|ZP_07296534.1|  recombination protein RecR [Stre...   288    5e-76 
gi|254385607|ref|ZP_05000932.1|  recombination protein recR [Stre...   288    5e-76 
gi|213966435|ref|ZP_03394612.1|  recombination protein RecR [Cory...   287    7e-76 
gi|239989505|ref|ZP_04710169.1|  recombination protein RecR [Stre...   286    1e-75 
gi|345016266|ref|YP_004818620.1|  Recombination protein recR [Str...   286    2e-75 
gi|295837978|ref|ZP_06824911.1|  recombination protein RecR [Stre...   286    2e-75 
gi|21222034|ref|NP_627813.1|  recombination protein RecR [Strepto...   284    5e-75 
gi|294630548|ref|ZP_06709108.1|  recombination protein RecR [Stre...   284    6e-75 


>gi|15610851|ref|NP_218232.1| recombination protein RecR [Mycobacterium tuberculosis H37Rv]
 gi|15843336|ref|NP_338373.1| recombination protein RecR [Mycobacterium tuberculosis CDC1551]
 gi|31794887|ref|NP_857380.1| recombination protein RecR [Mycobacterium bovis AF2122/97]
 76 more sequence titles
 
gi|121639631|ref|YP_979855.1| recombination protein RecR [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|148663580|ref|YP_001285103.1| recombination protein RecR [Mycobacterium tuberculosis H37Ra]
 gi|148824920|ref|YP_001289674.1| recombination protein RecR [Mycobacterium tuberculosis F11]
 gi|167970870|ref|ZP_02553147.1| recombination protein RecR [Mycobacterium tuberculosis H37Ra]
 gi|224992127|ref|YP_002646816.1| recombination protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800761|ref|YP_003033762.1| recombination protein recR [Mycobacterium tuberculosis KZN 1435]
 gi|254233210|ref|ZP_04926536.1| recombination protein recR [Mycobacterium tuberculosis C]
 gi|254366260|ref|ZP_04982304.1| recombination protein recR [Mycobacterium tuberculosis str. Haarlem]
 gi|254552825|ref|ZP_05143272.1| recombination protein RecR [Mycobacterium tuberculosis '98-R604 
INH-RIF-EM']
 gi|289441151|ref|ZP_06430895.1| recombination protein RecR [Mycobacterium tuberculosis T46]
 gi|289445314|ref|ZP_06435058.1| recombination protein RecR [Mycobacterium tuberculosis CPHL_A]
 gi|289555980|ref|ZP_06445190.1| recombination protein recR [Mycobacterium tuberculosis KZN 605]
 gi|289571959|ref|ZP_06452186.1| recombination protein recR [Mycobacterium tuberculosis T17]
 gi|289572366|ref|ZP_06452593.1| recombination protein recR [Mycobacterium tuberculosis K85]
 gi|289747554|ref|ZP_06506932.1| recombination protein recr [Mycobacterium tuberculosis 02_1987]
 gi|289748233|ref|ZP_06507611.1| recombination protein recR [Mycobacterium tuberculosis T92]
 gi|289763896|ref|ZP_06523274.1| recombination protein recR [Mycobacterium tuberculosis GM 1503]
 gi|297636393|ref|ZP_06954173.1| recombination protein RecR [Mycobacterium tuberculosis KZN 4207]
 gi|297733387|ref|ZP_06962505.1| recombination protein RecR [Mycobacterium tuberculosis KZN R506]
 gi|298527192|ref|ZP_07014601.1| recombination protein recR [Mycobacterium tuberculosis 94_M4241A]
 gi|306778072|ref|ZP_07416409.1| recombination protein recR [Mycobacterium tuberculosis SUMu001]
 gi|306778604|ref|ZP_07416941.1| recombination protein recR [Mycobacterium tuberculosis SUMu002]
 gi|306786627|ref|ZP_07424949.1| recombination protein recR [Mycobacterium tuberculosis SUMu003]
 gi|306790993|ref|ZP_07429315.1| recombination protein recR [Mycobacterium tuberculosis SUMu004]
 gi|306791312|ref|ZP_07429614.1| recombination protein recR [Mycobacterium tuberculosis SUMu005]
 gi|306795377|ref|ZP_07433679.1| recombination protein recR [Mycobacterium tuberculosis SUMu006]
 gi|306801348|ref|ZP_07438016.1| recombination protein recR [Mycobacterium tuberculosis SUMu008]
 gi|306805559|ref|ZP_07442227.1| recombination protein recR [Mycobacterium tuberculosis SUMu007]
 gi|306969956|ref|ZP_07482617.1| recombination protein recR [Mycobacterium tuberculosis SUMu009]
 gi|306974189|ref|ZP_07486850.1| recombination protein recR [Mycobacterium tuberculosis SUMu010]
 gi|307081897|ref|ZP_07491067.1| recombination protein recR [Mycobacterium tuberculosis SUMu011]
 gi|307086510|ref|ZP_07495623.1| recombination protein recR [Mycobacterium tuberculosis SUMu012]
 gi|313660718|ref|ZP_07817598.1| recombination protein RecR [Mycobacterium tuberculosis KZN V2475]
 gi|339633707|ref|YP_004725349.1| recombination protein RecR [Mycobacterium africanum GM041182]
 gi|340628689|ref|YP_004747141.1| putative recombination protein RECR [Mycobacterium canettii CIPT 
140010059]
 gi|54039039|sp|P65991.1|RECR_MYCBO RecName: Full=Recombination protein recR
 gi|54041798|sp|P65990.1|RECR_MYCTU RecName: Full=Recombination protein recR
 gi|171704440|sp|A1KQ47.1|RECR_MYCBP RecName: Full=Recombination protein recR
 gi|172047917|sp|A5U941.1|RECR_MYCTA RecName: Full=Recombination protein recR
 gi|2960139|emb|CAA18037.1| PROBABLE RECOMBINATION PROTEIN RECR [Mycobacterium tuberculosis 
H37Rv]
 gi|13883698|gb|AAK48187.1| recR protein [Mycobacterium tuberculosis CDC1551]
 gi|31620485|emb|CAD95928.1| RECOMBINATION PROTEIN RECR [Mycobacterium bovis AF2122/97]
 gi|121495279|emb|CAL73765.1| Recombination protein recR [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|124603003|gb|EAY61278.1| recombination protein recR [Mycobacterium tuberculosis C]
 gi|134151772|gb|EBA43817.1| recombination protein recR [Mycobacterium tuberculosis str. Haarlem]
 gi|148507732|gb|ABQ75541.1| recombination protein RecR [Mycobacterium tuberculosis H37Ra]
 gi|148723447|gb|ABR08072.1| recombination protein recR [Mycobacterium tuberculosis F11]
 gi|224775242|dbj|BAH28048.1| recombination protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253322264|gb|ACT26867.1| recombination protein recR [Mycobacterium tuberculosis KZN 1435]
 gi|289414070|gb|EFD11310.1| recombination protein RecR [Mycobacterium tuberculosis T46]
 gi|289418272|gb|EFD15473.1| recombination protein RecR [Mycobacterium tuberculosis CPHL_A]
 gi|289440612|gb|EFD23105.1| recombination protein recR [Mycobacterium tuberculosis KZN 605]
 gi|289536797|gb|EFD41375.1| recombination protein recR [Mycobacterium tuberculosis K85]
 gi|289545713|gb|EFD49361.1| recombination protein recR [Mycobacterium tuberculosis T17]
 gi|289688082|gb|EFD55570.1| recombination protein recr [Mycobacterium tuberculosis 02_1987]
 gi|289688820|gb|EFD56249.1| recombination protein recR [Mycobacterium tuberculosis T92]
 gi|289711402|gb|EFD75418.1| recombination protein recR [Mycobacterium tuberculosis GM 1503]
 gi|298496986|gb|EFI32280.1| recombination protein recR [Mycobacterium tuberculosis 94_M4241A]
 gi|308213601|gb|EFO73000.1| recombination protein recR [Mycobacterium tuberculosis SUMu001]
 gi|308328334|gb|EFP17185.1| recombination protein recR [Mycobacterium tuberculosis SUMu002]
 gi|308328738|gb|EFP17589.1| recombination protein recR [Mycobacterium tuberculosis SUMu003]
 gi|308332580|gb|EFP21431.1| recombination protein recR [Mycobacterium tuberculosis SUMu004]
 gi|308340071|gb|EFP28922.1| recombination protein recR [Mycobacterium tuberculosis SUMu005]
 gi|308344061|gb|EFP32912.1| recombination protein recR [Mycobacterium tuberculosis SUMu006]
 gi|308347859|gb|EFP36710.1| recombination protein recR [Mycobacterium tuberculosis SUMu007]
 gi|308351847|gb|EFP40698.1| recombination protein recR [Mycobacterium tuberculosis SUMu008]
 gi|308352512|gb|EFP41363.1| recombination protein recR [Mycobacterium tuberculosis SUMu009]
 gi|308356462|gb|EFP45313.1| recombination protein recR [Mycobacterium tuberculosis SUMu010]
 gi|308360409|gb|EFP49260.1| recombination protein recR [Mycobacterium tuberculosis SUMu011]
 gi|308364105|gb|EFP52956.1| recombination protein recR [Mycobacterium tuberculosis SUMu012]
 gi|323717579|gb|EGB26781.1| recombination protein recR [Mycobacterium tuberculosis CDC1551A]
 gi|328460489|gb|AEB05912.1| recombination protein recR [Mycobacterium tuberculosis KZN 4207]
 gi|339333063|emb|CCC28793.1| putative recombination protein RecR [Mycobacterium africanum 
GM041182]
 gi|340006879|emb|CCC46068.1| putative recombination protein RECR [Mycobacterium canettii CIPT 
140010059]
 gi|341603652|emb|CCC66333.1| Recombination protein recR [Mycobacterium bovis BCG str. Moreau 
RDJ]
 gi|344221552|gb|AEN02183.1| recombination protein RecR [Mycobacterium tuberculosis CTRI-2]
Length=203

 Score =  400 bits (1028),  Expect = 7e-110, Method: Compositional matrix adjust.
 Identities = 203/203 (100%), Positives = 203/203 (100%), Gaps = 0/203 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG
Sbjct  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ
Sbjct  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM
Sbjct  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVLA  203
            GGDLEFADELTLGRALAGRRVLA
Sbjct  181  GGDLEFADELTLGRALAGRRVLA  203


>gi|289755846|ref|ZP_06515224.1| recombination protein recr [Mycobacterium tuberculosis EAS054]
 gi|289696433|gb|EFD63862.1| recombination protein recr [Mycobacterium tuberculosis EAS054]
Length=203

 Score =  398 bits (1023),  Expect = 2e-109, Method: Compositional matrix adjust.
 Identities = 202/203 (99%), Positives = 202/203 (99%), Gaps = 0/203 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLT VLAKVRDGVRFCAVCG
Sbjct  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTSVLAKVRDGVRFCAVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ
Sbjct  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM
Sbjct  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVLA  203
            GGDLEFADELTLGRALAGRRVLA
Sbjct  181  GGDLEFADELTLGRALAGRRVLA  203


>gi|289759875|ref|ZP_06519253.1| recombination protein recR [Mycobacterium tuberculosis T85]
 gi|294995375|ref|ZP_06801066.1| recombination protein RecR [Mycobacterium tuberculosis 210]
 gi|289715439|gb|EFD79451.1| recombination protein recR [Mycobacterium tuberculosis T85]
 gi|326905554|gb|EGE52487.1| recombination protein recR [Mycobacterium tuberculosis W-148]
 gi|339296525|gb|AEJ48636.1| recombination protein RecR [Mycobacterium tuberculosis CCDC5079]
 gi|339300125|gb|AEJ52235.1| recombination protein RecR [Mycobacterium tuberculosis CCDC5180]
Length=203

 Score =  396 bits (1018),  Expect = 8e-109, Method: Compositional matrix adjust.
 Identities = 202/203 (99%), Positives = 202/203 (99%), Gaps = 0/203 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLT VLAKVRDGVRFCAVCG
Sbjct  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTCVLAKVRDGVRFCAVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ
Sbjct  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM
Sbjct  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVLA  203
            GGDLEFADELTLGRALAGRRVLA
Sbjct  181  GGDLEFADELTLGRALAGRRVLA  203


>gi|41406414|ref|NP_959250.1| recombination protein RecR [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118463085|ref|YP_879673.1| recombination protein RecR [Mycobacterium avium 104]
 gi|254773392|ref|ZP_05214908.1| recombination protein RecR [Mycobacterium avium subsp. avium 
ATCC 25291]
 gi|73621499|sp|Q744M5.1|RECR_MYCPA RecName: Full=Recombination protein recR
 gi|171472969|sp|A0Q9T5.1|RECR_MYCA1 RecName: Full=Recombination protein recR
 gi|41394763|gb|AAS02633.1| RecR [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118164372|gb|ABK65269.1| recombination protein RecR [Mycobacterium avium 104]
 gi|336460776|gb|EGO39662.1| recombination protein RecR [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=203

 Score =  383 bits (984),  Expect = 8e-105, Method: Compositional matrix adjust.
 Identities = 191/202 (95%), Positives = 198/202 (99%), Gaps = 0/202 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEP DIDRLT VLA+VRDGVRFCAVCG
Sbjct  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLARVRDGVRFCAVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVSD+ERCRICSD RRDASVVC+VEEPKD+QAVERTREFRGRYHVLGGALDPLSG+GPDQ
Sbjct  61   NVSDDERCRICSDPRRDASVVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELLSRIGERVDDVD+TEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM
Sbjct  121  LRIRELLSRIGERVDDVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRALAGRR +
Sbjct  181  GGDLEFADELTLGRALAGRRAM  202


>gi|254818509|ref|ZP_05223510.1| recombination protein RecR [Mycobacterium intracellulare ATCC 
13950]
Length=203

 Score =  382 bits (980),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 190/202 (95%), Positives = 196/202 (98%), Gaps = 0/202 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEP DIDRLT VLAKVRDGVRFCAVCG
Sbjct  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLAKVRDGVRFCAVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVSDNERCRIC+D RRD S VC+VEEPKD+QAVERTREFRGRYHVLGGALDPLSG+GPDQ
Sbjct  61   NVSDNERCRICADPRRDGSQVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELLSRIGERVDDVD+TEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM
Sbjct  121  LRIRELLSRIGERVDDVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRALAGRR +
Sbjct  181  GGDLEFADELTLGRALAGRRAM  202


>gi|342861918|ref|ZP_08718562.1| recombination protein RecR [Mycobacterium colombiense CECT 3035]
 gi|342130458|gb|EGT83767.1| recombination protein RecR [Mycobacterium colombiense CECT 3035]
Length=203

 Score =  380 bits (975),  Expect = 8e-104, Method: Compositional matrix adjust.
 Identities = 188/202 (94%), Positives = 195/202 (97%), Gaps = 0/202 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEP DIDRLT VL KVRDGVRFCAVCG
Sbjct  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPQDIDRLTAVLTKVRDGVRFCAVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVSDNERCRIC+D RRD S VC+VEEPKD+QAVERTREFRGRYHVLGGALDPLSG+GPDQ
Sbjct  61   NVSDNERCRICADPRRDGSQVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+RIGERVDDVD+TEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM
Sbjct  121  LRIRELLTRIGERVDDVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRALAGRR +
Sbjct  181  GGDLEFADELTLGRALAGRRAM  202


>gi|240173344|ref|ZP_04752002.1| recombination protein RecR [Mycobacterium kansasii ATCC 12478]
Length=203

 Score =  378 bits (971),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 190/203 (94%), Positives = 197/203 (98%), Gaps = 0/203 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELG+LPGIGPKSAQRIAFHLLSVEPSDIDRLT VL +VRDGVRFCAVCG
Sbjct  1    MFEGPVQDLIDELGRLPGIGPKSAQRIAFHLLSVEPSDIDRLTAVLGRVRDGVRFCAVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVSD ERCRIC+D RRD S+VC+VEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGP+Q
Sbjct  61   NVSDGERCRICADPRRDGSLVCVVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPEQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELLSRIGERVDDVD+TEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM
Sbjct  121  LRIRELLSRIGERVDDVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVLA  203
            GGDLEFADELTLGRAL GRRVLA
Sbjct  181  GGDLEFADELTLGRALTGRRVLA  203


>gi|296166809|ref|ZP_06849227.1| recombination protein R [Mycobacterium parascrofulaceum ATCC 
BAA-614]
 gi|295897825|gb|EFG77413.1| recombination protein R [Mycobacterium parascrofulaceum ATCC 
BAA-614]
Length=203

 Score =  377 bits (967),  Expect = 6e-103, Method: Compositional matrix adjust.
 Identities = 187/202 (93%), Positives = 193/202 (96%), Gaps = 0/202 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEP DIDRLT  L KVRDGVRFC VCG
Sbjct  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAALGKVRDGVRFCEVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVSDNERCRICSD RRD S+VC+VEEPKD+QAVERTREFRGRYHVLGGALDPLSG+GPDQ
Sbjct  61   NVSDNERCRICSDPRRDGSLVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELLSRIGERVDDVD+ EVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM
Sbjct  121  LRIRELLSRIGERVDDVDIAEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRALAGRR +
Sbjct  181  GGDLEFADELTLGRALAGRRAM  202


>gi|15828252|ref|NP_302515.1| recombination protein RecR [Mycobacterium leprae TN]
 gi|221230729|ref|YP_002504145.1| recombination protein RecR [Mycobacterium leprae Br4923]
 gi|6093948|sp|O69520.1|RECR_MYCLE RecName: Full=Recombination protein recR
 gi|3150109|emb|CAA19161.1| recombination protein RecR [Mycobacterium leprae]
 gi|13093945|emb|CAC31845.1| DNA repair protein [Mycobacterium leprae]
 gi|219933836|emb|CAR72427.1| DNA repair protein [Mycobacterium leprae Br4923]
Length=203

 Score =  374 bits (959),  Expect = 6e-102, Method: Compositional matrix adjust.
 Identities = 185/202 (92%), Positives = 193/202 (96%), Gaps = 0/202 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQ+LIDELGKLPGIGPKSAQRIAFHLLSVEP DIDRLT VL KVRD VRFC VCG
Sbjct  1    MFEGPVQNLIDELGKLPGIGPKSAQRIAFHLLSVEPQDIDRLTAVLVKVRDDVRFCTVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVSD+ERCRICSD RRDASVVC+VEEPKD+QAVERTREFRGRYHVLGGALDPLSGIGP+Q
Sbjct  61   NVSDDERCRICSDTRRDASVVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGIGPEQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELLSRIGERVDDV +TEVIIATDPNTEGEATATYLVRMLRD+PGLTVTRIASGLPM
Sbjct  121  LRIRELLSRIGERVDDVGITEVIIATDPNTEGEATATYLVRMLRDMPGLTVTRIASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRAL GRR +
Sbjct  181  GGDLEFADELTLGRALTGRRTM  202


>gi|120406470|ref|YP_956299.1| recombination protein RecR [Mycobacterium vanbaalenii PYR-1]
 gi|171769172|sp|A1TGJ3.1|RECR_MYCVP RecName: Full=Recombination protein recR
 gi|119959288|gb|ABM16293.1| DNA replication and repair protein RecR [Mycobacterium vanbaalenii 
PYR-1]
Length=203

 Score =  373 bits (957),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 186/203 (92%), Positives = 193/203 (96%), Gaps = 0/203 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEP DIDRLT VL KVRDGV FCAVCG
Sbjct  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLNKVRDGVTFCAVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVSD ERCRIC D RRDAS++C+VEEPKD+QAVERTREFRGRYHVLGGALDPLSGIGPDQ
Sbjct  61   NVSDEERCRICGDARRDASLICVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+RIGERVD V+V EVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM
Sbjct  121  LRIRELLNRIGERVDGVEVAEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVLA  203
            GGDLEFADELTLGRALAGRR +A
Sbjct  181  GGDLEFADELTLGRALAGRRAMA  203


>gi|183985200|ref|YP_001853491.1| recombination protein RecR [Mycobacterium marinum M]
 gi|183178526|gb|ACC43636.1| recombination protein RecR [Mycobacterium marinum M]
Length=203

 Score =  372 bits (954),  Expect = 2e-101, Method: Compositional matrix adjust.
 Identities = 185/202 (92%), Positives = 195/202 (97%), Gaps = 0/202 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEP DIDRLT VLAKVRDGVRFCAVCG
Sbjct  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLAKVRDGVRFCAVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVSD+ERCRIC+D RRD S+VC+VEEPKDIQAVERTRE+RGRYHVLGGALDPLSGIGP+Q
Sbjct  61   NVSDDERCRICADPRRDGSLVCVVEEPKDIQAVERTREYRGRYHVLGGALDPLSGIGPEQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+RIG+RVD VD+TEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM
Sbjct  121  LRIRELLTRIGDRVDGVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRAL GRR +
Sbjct  181  GGDLEFADELTLGRALTGRRAM  202


>gi|145221880|ref|YP_001132558.1| recombination protein RecR [Mycobacterium gilvum PYR-GCK]
 gi|315446385|ref|YP_004079264.1| DNA replication and repair protein RecR [Mycobacterium sp. Spyr1]
 gi|145214366|gb|ABP43770.1| DNA replication and repair protein RecR [Mycobacterium gilvum 
PYR-GCK]
 gi|315264688|gb|ADU01430.1| DNA replication and repair protein RecR [Mycobacterium sp. Spyr1]
Length=203

 Score =  370 bits (951),  Expect = 5e-101, Method: Compositional matrix adjust.
 Identities = 184/203 (91%), Positives = 193/203 (96%), Gaps = 0/203 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEP DIDRLT VL +VRDGV FC+VCG
Sbjct  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLNRVRDGVTFCSVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVSD ERCRIC D RRDAS++C+VEEPKD+QAVERTREFRGRYHVLGGALDPLSGIGPDQ
Sbjct  61   NVSDEERCRICGDARRDASLICVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+RIGERVD VDV EVIIATDPNTEGEATATYLVRMLRDIPGL+VTRIASGLPM
Sbjct  121  LRIRELLNRIGERVDGVDVAEVIIATDPNTEGEATATYLVRMLRDIPGLSVTRIASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVLA  203
            GGDLEFADELTLGRALAGRR +A
Sbjct  181  GGDLEFADELTLGRALAGRRAMA  203


>gi|108801866|ref|YP_642063.1| recombination protein RecR [Mycobacterium sp. MCS]
 gi|119871019|ref|YP_940971.1| recombination protein RecR [Mycobacterium sp. KMS]
 gi|126437834|ref|YP_001073525.1| recombination protein RecR [Mycobacterium sp. JLS]
 6 more sequence titles
 
gi|123177963|sp|Q1B277.1|RECR_MYCSS RecName: Full=Recombination protein recR
 gi|171769261|sp|A1UMX3.1|RECR_MYCSK RecName: Full=Recombination protein recR
 gi|171855239|sp|A3Q7A7.1|RECR_MYCSJ RecName: Full=Recombination protein recR
 gi|108772285|gb|ABG11007.1| DNA replication and repair protein RecR [Mycobacterium sp. MCS]
 gi|119697108|gb|ABL94181.1| DNA replication and repair protein RecR [Mycobacterium sp. KMS]
 gi|126237634|gb|ABO01035.1| DNA replication and repair protein RecR [Mycobacterium sp. JLS]
Length=203

 Score =  370 bits (950),  Expect = 6e-101, Method: Compositional matrix adjust.
 Identities = 184/203 (91%), Positives = 194/203 (96%), Gaps = 0/203 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEP DIDRLT VL ++RDGV+FC VCG
Sbjct  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLNRIRDGVKFCEVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVSD +RCRICSD RRDAS+VC+VEEPKD+QAVERTREFRGRYHVLGGALDPLSG+GPDQ
Sbjct  61   NVSDADRCRICSDPRRDASLVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+RIGERVD VDV EVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM
Sbjct  121  LRIRELLNRIGERVDGVDVAEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVLA  203
            GGDLEFADELTLGRALAGRR +A
Sbjct  181  GGDLEFADELTLGRALAGRRAMA  203


>gi|118619460|ref|YP_907792.1| recombination protein RecR [Mycobacterium ulcerans Agy99]
 gi|171460880|sp|A0PVF2.1|RECR_MYCUA RecName: Full=Recombination protein recR
 gi|118571570|gb|ABL06321.1| recombination protein RecR [Mycobacterium ulcerans Agy99]
Length=203

 Score =  369 bits (947),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 183/202 (91%), Positives = 194/202 (97%), Gaps = 0/202 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEP DIDRLT VLAKVRDGVRFCAVCG
Sbjct  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLAKVRDGVRFCAVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVSD+ERCRIC+D RRD ++VC+VEEPKDIQAVERTRE+RGRYHVLGGA DPLSGIGP+Q
Sbjct  61   NVSDDERCRICADPRRDGALVCVVEEPKDIQAVERTREYRGRYHVLGGAFDPLSGIGPEQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+RIG+RVD VD+TEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM
Sbjct  121  LRIRELLTRIGDRVDGVDITEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRAL GRR +
Sbjct  181  GGDLEFADELTLGRALTGRRAM  202


>gi|118473908|ref|YP_890498.1| recombination protein RecR [Mycobacterium smegmatis str. MC2 
155]
 gi|171472986|sp|A0R5R0.1|RECR_MYCS2 RecName: Full=Recombination protein recR
 gi|118175195|gb|ABK76091.1| recombination protein RecR [Mycobacterium smegmatis str. MC2 
155]
Length=203

 Score =  369 bits (946),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 183/202 (91%), Positives = 193/202 (96%), Gaps = 0/202 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEP DIDRLT VL ++RDGV FC+VCG
Sbjct  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPDIDRLTAVLGRIRDGVTFCSVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVSD ERCRICSD RRDAS+VC+VEEPKD+QAVERTREFRGRYHVLGGALDPLSGIGP+Q
Sbjct  61   NVSDEERCRICSDPRRDASLVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGIGPEQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+RIGERV+ VDV EVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM
Sbjct  121  LRIRELLNRIGERVEGVDVAEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRALAGRR +
Sbjct  181  GGDLEFADELTLGRALAGRRAM  202


>gi|333992643|ref|YP_004525257.1| recombination protein RecR [Mycobacterium sp. JDM601]
 gi|333488611|gb|AEF38003.1| recombination protein RecR [Mycobacterium sp. JDM601]
Length=203

 Score =  358 bits (920),  Expect = 2e-97, Method: Compositional matrix adjust.
 Identities = 174/203 (86%), Positives = 190/203 (94%), Gaps = 0/203 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPS+IDRLT VL KVR+GVRFC VCG
Sbjct  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSEIDRLTAVLTKVREGVRFCEVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVSD +RCRIC D RRD + +C+VEEPKD+ A+ERTREFRGRYHVLGGALDPLSGIGP+Q
Sbjct  61   NVSDAQRCRICGDSRRDFAQICVVEEPKDVAAIERTREFRGRYHVLGGALDPLSGIGPEQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LR+RELL+R+GERVD VDV+EVIIATDPNTEGEATATYLVRMLRDIPGL+VTR+ASGLPM
Sbjct  121  LRVRELLNRVGERVDGVDVSEVIIATDPNTEGEATATYLVRMLRDIPGLSVTRLASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVLA  203
            GGDLEFADELTLGRA  GRR +A
Sbjct  181  GGDLEFADELTLGRAFTGRRAMA  203


>gi|312137878|ref|YP_004005214.1| recombination protein recr [Rhodococcus equi 103S]
 gi|325673355|ref|ZP_08153047.1| recombination protein R [Rhodococcus equi ATCC 33707]
 gi|311887217|emb|CBH46526.1| recombination protein recR [Rhodococcus equi 103S]
 gi|325555945|gb|EGD25615.1| recombination protein R [Rhodococcus equi ATCC 33707]
Length=202

 Score =  351 bits (901),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 171/202 (85%), Positives = 188/202 (94%), Gaps = 0/202 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEP +IDRL  VL KVRDGV+FC VCG
Sbjct  1    MYEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPPEIDRLQAVLQKVRDGVQFCVVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
             VS+ E+CRICSD RRD ++VC+VEEPKD+QA+ERTREF+GRYHVLGGALDPLSGIGPDQ
Sbjct  61   TVSEEEKCRICSDPRRDRTMVCVVEEPKDVQAIERTREFKGRYHVLGGALDPLSGIGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+RIG + D VDV+EVIIATDPNTEGEATATYLVRMLRD PGLTV+R+ASGLPM
Sbjct  121  LRIRELLARIGNQEDGVDVSEVIIATDPNTEGEATATYLVRMLRDFPGLTVSRLASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRAL+GRR L
Sbjct  181  GGDLEFADELTLGRALSGRRTL  202


>gi|226303880|ref|YP_002763838.1| recombination protein RecR [Rhodococcus erythropolis PR4]
 gi|229492582|ref|ZP_04386385.1| recombination protein RecR [Rhodococcus erythropolis SK121]
 gi|226182995|dbj|BAH31099.1| recombination protein RecR [Rhodococcus erythropolis PR4]
 gi|229320568|gb|EEN86386.1| recombination protein RecR [Rhodococcus erythropolis SK121]
Length=206

 Score =  348 bits (894),  Expect = 2e-94, Method: Compositional matrix adjust.
 Identities = 166/203 (82%), Positives = 188/203 (93%), Gaps = 0/203 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EGPVQDLIDELGKLPG+GPKSAQRIAFHLLSVEP +IDRL   L ++RDGV+FC VCG
Sbjct  1    MYEGPVQDLIDELGKLPGVGPKSAQRIAFHLLSVEPPEIDRLKNALQRIRDGVQFCTVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
             VSD E+CRIC+D RRD +V+C+VEEPKD+QAVERTREF+GRYHVLGGAL+PLSGIGPDQ
Sbjct  61   TVSDQEKCRICADARRDRTVICVVEEPKDVQAVERTREFKGRYHVLGGALNPLSGIGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+RI  + D VDV+EVIIATDPNTEGEATATYLVRM+RDIPGLTV+R+ASGLPM
Sbjct  121  LRIRELLARIANQEDGVDVSEVIIATDPNTEGEATATYLVRMMRDIPGLTVSRLASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVLA  203
            GGDLEFADELTLGRAL+GRR L+
Sbjct  181  GGDLEFADELTLGRALSGRRELS  203


>gi|336441390|gb|AEI54920.1| recombination protein [Mycobacterium chelonae]
Length=202

 Score =  348 bits (893),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 172/202 (86%), Positives = 185/202 (92%), Gaps = 0/202 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELGKLPG+GPKSAQRIAFHLL VE  DIDRLT  L +VRDGV+FC VCG
Sbjct  1    MFEGPVQDLIDELGKLPGVGPKSAQRIAFHLLGVEAPDIDRLTAALTRVRDGVQFCEVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVSD ERCRICSD RRD ++VC+VEEPKD+QAVERTREFRGRYHVLGGALDPLSG+GPDQ
Sbjct  61   NVSDKERCRICSDPRRDLALVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+RIG   D V ++EVIIATDPNTEGEATATYLVRMLRD PGLTVTR+ASGLPM
Sbjct  121  LRIRELLTRIGTDEDGVSISEVIIATDPNTEGEATATYLVRMLRDFPGLTVTRLASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRAL+GRR L
Sbjct  181  GGDLEFADELTLGRALSGRRPL  202


>gi|169627424|ref|YP_001701073.1| recombination protein RecR [Mycobacterium abscessus ATCC 19977]
 gi|169239391|emb|CAM60419.1| Recombination protein RecR [Mycobacterium abscessus]
 gi|336441384|gb|AEI54917.1| recombination protein [Mycobacterium abscessus]
 gi|336441388|gb|AEI54919.1| recombination protein [Mycobacterium bolletii]
 gi|336441392|gb|AEI54921.1| recombination protein [Mycobacterium immunogenum]
 gi|336441394|gb|AEI54922.1| recombination protein [Mycobacterium massiliense]
Length=202

 Score =  348 bits (893),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 171/202 (85%), Positives = 185/202 (92%), Gaps = 0/202 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELGKLPG+GPKSAQRIAFHLL VE  DIDRLT  L +VRDGV+FC VCG
Sbjct  1    MFEGPVQDLIDELGKLPGVGPKSAQRIAFHLLGVEAPDIDRLTAALTRVRDGVQFCEVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVSD ERCRIC+D RRD ++VC+VEEPKD+QAVERTREFRGRYHVLGGALDPLSG+GPDQ
Sbjct  61   NVSDKERCRICADPRRDIALVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+RIG   D V ++EVIIATDPNTEGEATATYLVRMLRD PGLTVTR+ASGLPM
Sbjct  121  LRIRELLTRIGTEEDGVSISEVIIATDPNTEGEATATYLVRMLRDFPGLTVTRLASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRAL+GRR L
Sbjct  181  GGDLEFADELTLGRALSGRRPL  202


>gi|111021188|ref|YP_704160.1| recombination protein RecR [Rhodococcus jostii RHA1]
 gi|226363548|ref|YP_002781330.1| recombination protein RecR [Rhodococcus opacus B4]
 gi|123340193|sp|Q0S8Y4.1|RECR_RHOSR RecName: Full=Recombination protein recR
 gi|110820718|gb|ABG96002.1| recombination protein [Rhodococcus jostii RHA1]
 gi|226242037|dbj|BAH52385.1| recombination protein RecR [Rhodococcus opacus B4]
Length=202

 Score =  348 bits (892),  Expect = 4e-94, Method: Compositional matrix adjust.
 Identities = 168/202 (84%), Positives = 186/202 (93%), Gaps = 0/202 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EGPVQDLIDELGKLPG+GPKSAQRIAFHLLSVEP +IDRL   L +VRDGV+FC VCG
Sbjct  1    MYEGPVQDLIDELGKLPGVGPKSAQRIAFHLLSVEPPEIDRLKNALQRVRDGVQFCVVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
             VSD E CRIC+D RRD +V+C+VEEPKD+QAVERTREF+GRYHVLGGALDPLSG+GPDQ
Sbjct  61   TVSDKEHCRICADPRRDRTVICVVEEPKDVQAVERTREFKGRYHVLGGALDPLSGVGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+RIG + D VDV+EVIIATDPNTEGEATATYLVRMLRD PGLTV+R+ASGLPM
Sbjct  121  LRIRELLARIGNQEDGVDVSEVIIATDPNTEGEATATYLVRMLRDFPGLTVSRLASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRAL+GRR L
Sbjct  181  GGDLEFADELTLGRALSGRRTL  202


>gi|336441386|gb|AEI54918.1| recombination protein [Mycobacterium franklinii]
Length=202

 Score =  346 bits (888),  Expect = 9e-94, Method: Compositional matrix adjust.
 Identities = 171/202 (85%), Positives = 184/202 (92%), Gaps = 0/202 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELGKLPG+GPKSAQRIAFHLL VE  DIDRLT  L +VRDGV+FC VCG
Sbjct  1    MFEGPVQDLIDELGKLPGVGPKSAQRIAFHLLGVEAPDIDRLTAALTRVRDGVQFCEVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVSD ERCRICSD RRD ++VC+VEEPKD+QAVERTREFRGRYHVLGGALDPLSG+GP+Q
Sbjct  61   NVSDKERCRICSDPRRDIALVCVVEEPKDVQAVERTREFRGRYHVLGGALDPLSGVGPEQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL RIG   D V ++EVIIATDPNTEGEATATYLVRMLRD PGLTVTR+ASGLPM
Sbjct  121  LRIRELLRRIGTEEDGVSISEVIIATDPNTEGEATATYLVRMLRDFPGLTVTRLASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRAL+GRR L
Sbjct  181  GGDLEFADELTLGRALSGRRPL  202


>gi|54022259|ref|YP_116501.1| recombination protein RecR [Nocardia farcinica IFM 10152]
 gi|73621501|sp|Q5Z354.1|RECR_NOCFA RecName: Full=Recombination protein recR
 gi|54013767|dbj|BAD55137.1| putative recombination and repair protein [Nocardia farcinica 
IFM 10152]
Length=202

 Score =  345 bits (885),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 168/202 (84%), Positives = 184/202 (92%), Gaps = 0/202 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EGPVQDLIDELGKLPG+GPKSAQRIAFHLL VEP +IDRL   L KVRDGV+FC VCG
Sbjct  1    MYEGPVQDLIDELGKLPGVGPKSAQRIAFHLLQVEPPEIDRLQAALQKVRDGVQFCVVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
             VSD E CRIC+D RRD +++C+VEEPKD+QA+ERTREFRGRYHVLGGALDPLSG+GPDQ
Sbjct  61   TVSDGELCRICADPRRDRTMICVVEEPKDVQAIERTREFRGRYHVLGGALDPLSGVGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+RIG + D VDV EVIIATDPNTEGEATATYLVRMLRD PGLTVTR+ASGLPM
Sbjct  121  LRIRELLARIGNQDDGVDVAEVIIATDPNTEGEATATYLVRMLRDFPGLTVTRLASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRAL+GRR L
Sbjct  181  GGDLEFADELTLGRALSGRRAL  202


>gi|257057602|ref|YP_003135434.1| recombination protein RecR [Saccharomonospora viridis DSM 43017]
 gi|256587474|gb|ACU98607.1| DNA replication and repair protein RecR [Saccharomonospora viridis 
DSM 43017]
Length=198

 Score =  332 bits (850),  Expect = 2e-89, Method: Compositional matrix adjust.
 Identities = 165/202 (82%), Positives = 183/202 (91%), Gaps = 4/202 (1%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EG VQDLIDELG+LPGIGPKSAQRIAFHLL+ +P+D+ RL  VL KVR+GVRFC VCG
Sbjct  1    MYEGVVQDLIDELGRLPGIGPKSAQRIAFHLLASDPADLARLQEVLGKVREGVRFCEVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVS+ ERCRICSD RRD SV+C+VEEPKD+ AVERTREFRGRYHVLGGALDPLSG+GPDQ
Sbjct  61   NVSERERCRICSDPRRDTSVICVVEEPKDVLAVERTREFRGRYHVLGGALDPLSGVGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRI+ELLSRIG      +V+EVIIATDPNTEGEATATYLVRML+D PGLTVTR+ASGLPM
Sbjct  121  LRIKELLSRIGAD----EVSEVIIATDPNTEGEATATYLVRMLKDFPGLTVTRLASGLPM  176

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRAL+GRR L
Sbjct  177  GGDLEFADELTLGRALSGRRAL  198


>gi|333917901|ref|YP_004491482.1| Recombination protein R [Amycolicicoccus subflavus DQS3-9A1]
 gi|333480122|gb|AEF38682.1| Recombination protein R [Amycolicicoccus subflavus DQS3-9A1]
Length=206

 Score =  325 bits (834),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 160/206 (78%), Positives = 184/206 (90%), Gaps = 4/206 (1%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EGPVQDLIDELGKLPGIGPKSAQRIAFHLL+ + + I RL   L ++RDGV+FC VCG
Sbjct  1    MYEGPVQDLIDELGKLPGIGPKSAQRIAFHLLTADRAQIVRLQDALQRIRDGVQFCVVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
             V+++E+CRICSD RRD +++C+VEEPKD+QAVERTREF+G YHVLGGALDPLSG+GPDQ
Sbjct  61   TVAEHEKCRICSDSRRDRTMICVVEEPKDVQAVERTREFKGVYHVLGGALDPLSGVGPDQ  120

Query  121  LRIRELLSRIGERV----DDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIAS  176
            LRIRELL+RIG +V    D V+VTEVIIATDPNTEGEATATYLVRMLR  PGL+VTR+AS
Sbjct  121  LRIRELLARIGGQVPEGDDAVEVTEVIIATDPNTEGEATATYLVRMLRGFPGLSVTRLAS  180

Query  177  GLPMGGDLEFADELTLGRALAGRRVL  202
            GLPMGGDLEFADELTLGRAL+GRR L
Sbjct  181  GLPMGGDLEFADELTLGRALSGRRAL  206


>gi|300790713|ref|YP_003771004.1| recombination protein RecR [Amycolatopsis mediterranei U32]
 gi|299800227|gb|ADJ50602.1| recombination protein RecR [Amycolatopsis mediterranei U32]
 gi|340532403|gb|AEK47608.1| recombination protein RecR [Amycolatopsis mediterranei S699]
Length=198

 Score =  325 bits (833),  Expect = 2e-87, Method: Compositional matrix adjust.
 Identities = 157/202 (78%), Positives = 182/202 (91%), Gaps = 4/202 (1%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EG VQDLIDELG+LPG+GPKSAQRIAFHLL+ +P+DI RL  VL KV++GV+FC VCG
Sbjct  1    MYEGVVQDLIDELGRLPGVGPKSAQRIAFHLLATDPADIARLQDVLGKVKEGVQFCEVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVS+ ++CRIC D RRD +V+C+VEEPKD+ AVERTREF+GRYHVLGGALDPLSGIGP+Q
Sbjct  61   NVSEQQKCRICRDERRDLTVICVVEEPKDVLAVERTREFKGRYHVLGGALDPLSGIGPEQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LR+RELL RIGE     D+ E+IIATDPNTEGEATATYLVRMLR+ PGL+VTR+ASGLPM
Sbjct  121  LRMRELLKRIGE----ADIKEIIIATDPNTEGEATATYLVRMLRNFPGLSVTRLASGLPM  176

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRAL+GRRVL
Sbjct  177  GGDLEFADELTLGRALSGRRVL  198


>gi|291006687|ref|ZP_06564660.1| recombination protein RecR [Saccharopolyspora erythraea NRRL 
2338]
 gi|172044197|sp|A4F6D1.2|RECR_SACEN RecName: Full=Recombination protein recR
Length=198

 Score =  323 bits (829),  Expect = 6e-87, Method: Compositional matrix adjust.
 Identities = 159/202 (79%), Positives = 179/202 (89%), Gaps = 4/202 (1%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EGPVQDLIDELG+LPGIGPKSAQRIAFHLL+ EP+D+ RL  VL KV++GV FC +CG
Sbjct  1    MYEGPVQDLIDELGRLPGIGPKSAQRIAFHLLAAEPADVTRLQEVLQKVKEGVVFCDICG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVS+   CRIC D RRD +VVC+VEEPKD+ AVERTREFRGRYHVLGGALDPLSG+GPDQ
Sbjct  61   NVSEEPTCRICRDARRDPAVVCVVEEPKDVLAVERTREFRGRYHVLGGALDPLSGVGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LR+RELL+RIG      ++TEVIIATDPNTEGEATATYLVRMLRD PGL VTR+ASGLPM
Sbjct  121  LRVRELLTRIGRD----EITEVIIATDPNTEGEATATYLVRMLRDFPGLNVTRLASGLPM  176

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRAL+GRR +
Sbjct  177  GGDLEFADELTLGRALSGRRAV  198


>gi|302530932|ref|ZP_07283274.1| recombination protein RecR [Streptomyces sp. AA4]
 gi|302439827|gb|EFL11643.1| recombination protein RecR [Streptomyces sp. AA4]
Length=198

 Score =  323 bits (829),  Expect = 7e-87, Method: Compositional matrix adjust.
 Identities = 157/202 (78%), Positives = 180/202 (90%), Gaps = 4/202 (1%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EG VQDLIDELG+LPG+GPKSAQRIAFHLL+ +P+DI RL  VL KV++GV+FC +CG
Sbjct  1    MYEGVVQDLIDELGRLPGVGPKSAQRIAFHLLAADPADIARLQDVLGKVKEGVQFCEICG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVS+ E CRIC D RRD +V+C+VEEPKD+ AVERTREF+GRYHVLGGALDPLSGIGP+Q
Sbjct  61   NVSEQETCRICRDERRDLTVICVVEEPKDVLAVERTREFKGRYHVLGGALDPLSGIGPEQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LR+R+LL RIGE     DV E+IIATDPNTEGEATATYLVRMLRD PGL+VTR+ASGLPM
Sbjct  121  LRMRQLLQRIGE----ADVKEIIIATDPNTEGEATATYLVRMLRDFPGLSVTRLASGLPM  176

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRAL+GRR L
Sbjct  177  GGDLEFADELTLGRALSGRRAL  198


>gi|331694241|ref|YP_004330480.1| Recombination protein recR [Pseudonocardia dioxanivorans CB1190]
 gi|326948930|gb|AEA22627.1| Recombination protein recR [Pseudonocardia dioxanivorans CB1190]
Length=205

 Score =  323 bits (829),  Expect = 7e-87, Method: Compositional matrix adjust.
 Identities = 156/205 (77%), Positives = 180/205 (88%), Gaps = 3/205 (1%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELG+LPG+GPKSAQRIAFHLL+ +P+D+ RL  VL +V+ GVRFC VC 
Sbjct  1    MFEGPVQDLIDELGRLPGVGPKSAQRIAFHLLAADPADVSRLQEVLQRVKQGVRFCEVCS  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVS+NERCR C+D RRD +VVC+VEEPKD+ AVERTREF+GRYHVLGGALDPL GIGPD 
Sbjct  61   NVSENERCRFCTDARRDPTVVCVVEEPKDVLAVERTREFKGRYHVLGGALDPLGGIGPDS  120

Query  121  LRIRELLSRI---GERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASG  177
            L+IRELL+R+   G   D+ ++ EVIIATDPNTEGEATATYLVR+LRD PGLTV+R A+G
Sbjct  121  LKIRELLARLGGTGPASDETEIAEVIIATDPNTEGEATATYLVRLLRDFPGLTVSRPAAG  180

Query  178  LPMGGDLEFADELTLGRALAGRRVL  202
            LPMGGDLEFADELTLGRAL+GRR L
Sbjct  181  LPMGGDLEFADELTLGRALSGRRAL  205


>gi|256374360|ref|YP_003098020.1| recombination protein RecR [Actinosynnema mirum DSM 43827]
 gi|255918663|gb|ACU34174.1| recombination protein RecR [Actinosynnema mirum DSM 43827]
Length=197

 Score =  322 bits (824),  Expect = 2e-86, Method: Compositional matrix adjust.
 Identities = 158/202 (79%), Positives = 178/202 (89%), Gaps = 5/202 (2%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EGPVQDLIDELG+LPG+GPKSAQRIAFHLL+ EP+DI RL   L KV++GV FC VCG
Sbjct  1    MYEGPVQDLIDELGRLPGVGPKSAQRIAFHLLAAEPADIGRLQDALQKVKEGVVFCEVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVS    CRIC D RRD +++C+VEEPKD+ AVERTREF+GRYHVLGGALDPLSGIGPDQ
Sbjct  61   NVSAETTCRICRDPRRDLTLICVVEEPKDVLAVERTREFKGRYHVLGGALDPLSGIGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIR+LL+RIG      DV+E+IIATDPNTEGEATATYLVRMLRD PGL+VTR+ASGLPM
Sbjct  121  LRIRQLLTRIG-----TDVSEIIIATDPNTEGEATATYLVRMLRDFPGLSVTRLASGLPM  175

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRAL+GRR L
Sbjct  176  GGDLEFADELTLGRALSGRRSL  197


>gi|325003633|ref|ZP_08124745.1| recombination protein RecR [Pseudonocardia sp. P1]
Length=205

 Score =  321 bits (823),  Expect = 3e-86, Method: Compositional matrix adjust.
 Identities = 156/205 (77%), Positives = 179/205 (88%), Gaps = 3/205 (1%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDELG+LPG+GPKSAQRIAFHLL+ +P+DI RL  VL  V+ GV FC VCG
Sbjct  1    MFEGPVQDLIDELGRLPGVGPKSAQRIAFHLLAADPADIARLQEVLQTVKQGVAFCEVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVS + RCR CSD RRD +++C+VEEPKD+ AVERTREF+GRYHVLGGALDPL+G+GPD 
Sbjct  61   NVSSDTRCRYCSDARRDPALLCVVEEPKDVLAVERTREFKGRYHVLGGALDPLAGVGPDT  120

Query  121  LRIRELLSRI---GERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASG  177
            LRIRELL+R+   G   D+  ++EVIIATDPNTEGEATATYLVR+LRD PGLTVTR+ASG
Sbjct  121  LRIRELLARLGGTGPAQDETSISEVIIATDPNTEGEATATYLVRLLRDFPGLTVTRLASG  180

Query  178  LPMGGDLEFADELTLGRALAGRRVL  202
            LPMGGDLEFADE+TLGRALAGRR L
Sbjct  181  LPMGGDLEFADEMTLGRALAGRRAL  205


>gi|296141675|ref|YP_003648918.1| recombination protein RecR [Tsukamurella paurometabola DSM 20162]
 gi|296029809|gb|ADG80579.1| recombination protein RecR [Tsukamurella paurometabola DSM 20162]
Length=215

 Score =  314 bits (805),  Expect = 4e-84, Method: Compositional matrix adjust.
 Identities = 152/203 (75%), Positives = 176/203 (87%), Gaps = 0/203 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EGPVQ+LIDEL KLPG+GP+ AQRIAFHLL  +PS+IDRLT  L +VRD VR+C VCG
Sbjct  1    MYEGPVQELIDELAKLPGVGPRGAQRIAFHLLGAQPSEIDRLTHALTRVRDDVRYCEVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVS + RCRICSD RRDAS +C+VEE KD+QAVERTRE+RG YHVLGGAL+P+  IGPD+
Sbjct  61   NVSADVRCRICSDSRRDASKICVVEEAKDVQAVERTREYRGLYHVLGGALNPIKAIGPDK  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL R+G  VD V+V EVIIATDPNTEGEATA +LVRML+D PGLTVTR A+GLPM
Sbjct  121  LRIRELLVRLGAAVDGVEVDEVIIATDPNTEGEATAAFLVRMLKDFPGLTVTRPAAGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVLA  203
            G +LEFADELTLGRA++GRR LA
Sbjct  181  GAELEFADELTLGRAMSGRRSLA  203


>gi|343926404|ref|ZP_08765909.1| recombination protein RecR [Gordonia alkanivorans NBRC 16433]
 gi|343763642|dbj|GAA12835.1| recombination protein RecR [Gordonia alkanivorans NBRC 16433]
Length=203

 Score =  308 bits (788),  Expect = 4e-82, Method: Compositional matrix adjust.
 Identities = 157/203 (78%), Positives = 177/203 (88%), Gaps = 0/203 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EGP+QDLIDEL K PG+GPK AQRIAFHLL+ E SDIDRL   L +VRD V FCA CG
Sbjct  1    MYEGPIQDLIDELAKQPGLGPKGAQRIAFHLLAGEKSDIDRLIAALGRVRDDVVFCAECG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVS N  CRICSD RRDA+ +C+VEEPKD+ A+ERT+EF GRYHVLGGALDPLSGIGPDQ
Sbjct  61   NVSANRLCRICSDARRDATKICVVEEPKDVHAIERTKEFTGRYHVLGGALDPLSGIGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL R+  + D VDV+EVI+ATDPNTEGEATATYL RML+D PGL+VTR+ASGLPM
Sbjct  121  LRIRELLRRLANQEDGVDVSEVIVATDPNTEGEATATYLQRMLKDFPGLSVTRLASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVLA  203
            GGDLEFADELTLGRAL+GRR+LA
Sbjct  181  GGDLEFADELTLGRALSGRRILA  203


>gi|317506737|ref|ZP_07964519.1| recombination protein RecR [Segniliparus rugosus ATCC BAA-974]
 gi|316254956|gb|EFV14244.1| recombination protein RecR [Segniliparus rugosus ATCC BAA-974]
Length=203

 Score =  307 bits (787),  Expect = 6e-82, Method: Compositional matrix adjust.
 Identities = 146/203 (72%), Positives = 173/203 (86%), Gaps = 0/203 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDEL +LPG+GPKSAQRIAFHL+     +IDRL   LAK+RDGV+FC +CG
Sbjct  1    MFEGPVQDLIDELSRLPGVGPKSAQRIAFHLVGSPKPEIDRLGSALAKIRDGVQFCDICG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            N++ +E CRIC D RRD S +C+V +PKD+ A+ERTREF GRYHVLGGAL+PL+G+GPD+
Sbjct  61   NIAADEICRICKDPRRDLSRICVVSQPKDVVAIERTREFHGRYHVLGGALNPLAGVGPDR  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LR++ELL+R+   VD V VTE+IIATDPNTEGEATATYL RML + P L VTR+ASGLPM
Sbjct  121  LRVKELLTRLASAVDGVTVTEIIIATDPNTEGEATATYLARMLANFPDLEVTRLASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVLA  203
            GGDLEFADE+TLGRALAGRR LA
Sbjct  181  GGDLEFADEMTLGRALAGRRSLA  203


>gi|134096870|ref|YP_001102531.1| recombination protein RecR [Saccharopolyspora erythraea NRRL 
2338]
 gi|133909493|emb|CAL99605.1| putative recombination and repair protein [Saccharopolyspora 
erythraea NRRL 2338]
Length=190

 Score =  306 bits (785),  Expect = 9e-82, Method: Compositional matrix adjust.
 Identities = 151/194 (78%), Positives = 171/194 (89%), Gaps = 4/194 (2%)

Query  9    LIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCGNVSDNERC  68
            +IDELG+LPGIGPKSAQRIAFHLL+ EP+D+ RL  VL KV++GV FC +CGNVS+   C
Sbjct  1    MIDELGRLPGIGPKSAQRIAFHLLAAEPADVTRLQEVLQKVKEGVVFCDICGNVSEEPTC  60

Query  69   RICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQLRIRELLS  128
            RIC D RRD +VVC+VEEPKD+ AVERTREFRGRYHVLGGALDPLSG+GPDQLR+RELL+
Sbjct  61   RICRDARRDPAVVCVVEEPKDVLAVERTREFRGRYHVLGGALDPLSGVGPDQLRVRELLT  120

Query  129  RIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPMGGDLEFAD  188
            RIG      ++TEVIIATDPNTEGEATATYLVRMLRD PGL VTR+ASGLPMGGDLEFAD
Sbjct  121  RIGRD----EITEVIIATDPNTEGEATATYLVRMLRDFPGLNVTRLASGLPMGGDLEFAD  176

Query  189  ELTLGRALAGRRVL  202
            ELTLGRAL+GRR +
Sbjct  177  ELTLGRALSGRRAV  190


>gi|296393612|ref|YP_003658496.1| recombination protein RecR [Segniliparus rotundus DSM 44985]
 gi|296180759|gb|ADG97665.1| recombination protein RecR [Segniliparus rotundus DSM 44985]
Length=212

 Score =  306 bits (784),  Expect = 1e-81, Method: Compositional matrix adjust.
 Identities = 143/202 (71%), Positives = 171/202 (85%), Gaps = 0/202 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGPVQDLIDEL +LPG+GPK AQRIAFHL+     +IDRL   LAK+RDGVRFC +CG
Sbjct  1    MFEGPVQDLIDELSRLPGVGPKGAQRIAFHLVGSPKPEIDRLVSALAKIRDGVRFCDICG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            N++ +  CR+C+D RRD + +C+V +PKD+ A+ERTREF GRYHVLGGAL+PL+GIGPD+
Sbjct  61   NIAADVTCRVCADARRDLTRICVVSQPKDVAAIERTREFHGRYHVLGGALNPLAGIGPDR  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LR++ELL+R+G   D V VTE+IIATDPNTEGEATATYL RML + P L VTR+ASGLPM
Sbjct  121  LRVKELLTRLGASADGVTVTEIIIATDPNTEGEATATYLARMLANFPDLEVTRLASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADE+TLGRALAGRR L
Sbjct  181  GGDLEFADEMTLGRALAGRRAL  202


>gi|262200456|ref|YP_003271664.1| recombination protein RecR [Gordonia bronchialis DSM 43247]
 gi|262083803|gb|ACY19771.1| recombination protein RecR [Gordonia bronchialis DSM 43247]
Length=203

 Score =  301 bits (771),  Expect = 3e-80, Method: Compositional matrix adjust.
 Identities = 154/203 (76%), Positives = 175/203 (87%), Gaps = 0/203 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EGP+QDLIDEL K PG+GPK AQRIAF LL+ E S+IDRL   L +VRD V FCA CG
Sbjct  1    MYEGPIQDLIDELAKQPGLGPKGAQRIAFALLAGEKSEIDRLVAALGRVRDDVTFCAECG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NVS N  CRICSD RRDA+ +C+VEEPKD+ A+ERT+EF GRYHVLGGALDPLSGIGPDQ
Sbjct  61   NVSANRLCRICSDARRDATKICVVEEPKDVHAIERTKEFNGRYHVLGGALDPLSGIGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL R+    D  DVTE+I+ATDPNTEGEATATYL+RML++ PGL+VTR+ASGLPM
Sbjct  121  LRIRELLRRLANTDDGNDVTEIIVATDPNTEGEATATYLLRMLKEFPGLSVTRLASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVLA  203
            GGDLEFADELTLGRAL+GRRVLA
Sbjct  181  GGDLEFADELTLGRALSGRRVLA  203


>gi|326383523|ref|ZP_08205209.1| recombination protein RecR [Gordonia neofelifaecis NRRL B-59395]
 gi|326197607|gb|EGD54795.1| recombination protein RecR [Gordonia neofelifaecis NRRL B-59395]
Length=203

 Score =  296 bits (758),  Expect = 1e-78, Method: Compositional matrix adjust.
 Identities = 151/202 (75%), Positives = 175/202 (87%), Gaps = 0/202 (0%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EGP+QDLID+L KLPG+GPK AQRIAFHLL+ E  +IDRL   L  VRD V FC  CG
Sbjct  1    MYEGPIQDLIDQLAKLPGLGPKGAQRIAFHLLAGENVEIDRLIAALGHVRDDVTFCTECG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NV+ +  CRIC D RRDA+ +C+VEEPKDI A+ERT+EF GRYHVLGGALDPLSGIGPDQ
Sbjct  61   NVAADTLCRICGDARRDATKICVVEEPKDIYAIERTKEFDGRYHVLGGALDPLSGIGPDQ  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL R+G++ D  DV+E+I+ATDPNTEGEATATYL+RML+D PGL+VTR+ASGLPM
Sbjct  121  LRIRELLRRLGDQPDGQDVSEIIVATDPNTEGEATATYLLRMLKDFPGLSVTRLASGLPM  180

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLEFADELTLGRAL+GRRVL
Sbjct  181  GGDLEFADELTLGRALSGRRVL  202


>gi|258650921|ref|YP_003200077.1| recombination protein RecR [Nakamurella multipartita DSM 44233]
 gi|258554146|gb|ACV77088.1| recombination protein RecR [Nakamurella multipartita DSM 44233]
Length=202

 Score =  291 bits (744),  Expect = 5e-77, Method: Compositional matrix adjust.
 Identities = 141/200 (71%), Positives = 168/200 (84%), Gaps = 4/200 (2%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            ++EGPVQDLIDELG+LPGIGPKSAQRIAFHLL+ +P DI RL   L +V+D VRFC VCG
Sbjct  3    VYEGPVQDLIDELGRLPGIGPKSAQRIAFHLLTADPVDITRLQSALQRVKDEVRFCTVCG  62

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NV+ +E+CRIC+D  R+ +V+C+VEEPKD+ AVERTREFRG+YHVLGGA+ P+ GIGPDQ
Sbjct  63   NVAADEKCRICADPAREDAVICVVEEPKDVAAVERTREFRGKYHVLGGAISPIDGIGPDQ  122

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRI  LL+RI        V EVI+ATDPN EGEATATYL R+L+  PGLTVTR+ASGLP+
Sbjct  123  LRIAPLLTRIAAP----GVREVILATDPNLEGEATATYLTRLLQPFPGLTVTRLASGLPV  178

Query  181  GGDLEFADELTLGRALAGRR  200
            GGDLE+ADE+TLGRA AGRR
Sbjct  179  GGDLEYADEVTLGRAFAGRR  198


>gi|297158533|gb|ADI08245.1| recombination protein RecR [Streptomyces bingchenggensis BCW-1]
Length=199

 Score =  289 bits (740),  Expect = 1e-76, Method: Compositional matrix adjust.
 Identities = 139/202 (69%), Positives = 171/202 (85%), Gaps = 5/202 (2%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EG VQDLIDELG+LPG+GPKSAQRIAFH+L  EP+D+ RL   L +V+D VRFCAVCG
Sbjct  1    MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPADVRRLAHALTEVKDKVRFCAVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NV++ E+CR+C D RRD +V+C+VEEPKD+ A+ERTREFRGRYHVLGGA+ P+ G+GPD 
Sbjct  61   NVAEAEQCRVCQDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+R+     D  VTE+I+ATDPN EGEATATYL RM++ + GL VTR+ASGLP+
Sbjct  121  LRIRELLTRLA----DGTVTELILATDPNLEGEATATYLARMVKPM-GLKVTRLASGLPV  175

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLE+ADE+TLGRA  GRR+L
Sbjct  176  GGDLEYADEVTLGRAFEGRRLL  197


>gi|337766940|emb|CCB75651.1| DNA repair and recombination protein [Streptomyces cattleya NRRL 
8057]
Length=199

 Score =  289 bits (739),  Expect = 2e-76, Method: Compositional matrix adjust.
 Identities = 139/202 (69%), Positives = 171/202 (85%), Gaps = 5/202 (2%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EG VQDLIDELG+LPG+GPKSAQRIAFH+L  +P+D+ RL   LA+V++ VRFCAVCG
Sbjct  1    MYEGVVQDLIDELGRLPGVGPKSAQRIAFHVLQADPADVRRLAHALAEVKEKVRFCAVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NV+  ERCR+C D RRD +V+C+VEEPKD+ A+ERTREFRGRYHVLGGA+ P+ G+GPD 
Sbjct  61   NVAQEERCRVCQDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+R+     D  VTE+I+ATDPN EGEATATYL RM++ + GL VTR+ASGLP+
Sbjct  121  LRIRELLARLA----DGTVTELILATDPNLEGEATATYLARMIKPM-GLKVTRLASGLPV  175

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLE+ADE+TLGRA  GRR+L
Sbjct  176  GGDLEYADEVTLGRAFEGRRLL  197


>gi|297193078|ref|ZP_06910476.1| recombination protein recR [Streptomyces pristinaespiralis ATCC 
25486]
 gi|197719792|gb|EDY63700.1| recombination protein recR [Streptomyces pristinaespiralis ATCC 
25486]
Length=199

 Score =  288 bits (737),  Expect = 4e-76, Method: Compositional matrix adjust.
 Identities = 140/202 (70%), Positives = 169/202 (84%), Gaps = 5/202 (2%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EG VQDLIDELG+LPG+GPKSAQRIAFH+L  EP+D+ RL   L +V+D VRFCAVCG
Sbjct  1    MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQTEPADVRRLAHALLEVKDKVRFCAVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NV+  E+C IC D RRD SV+C+VEEPKD+ A+ERTREFRGRYHVLGGA+ P+ G+GPD 
Sbjct  61   NVAQQEQCNICRDPRRDPSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+R+     D  VTE+I+ATDPN EGEATATYL RM++ + GL VTR+ASGLP+
Sbjct  121  LRIRELLARLA----DGTVTELILATDPNLEGEATATYLARMIKPM-GLKVTRLASGLPV  175

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLE+ADE+TLGRA  GRR+L
Sbjct  176  GGDLEYADEVTLGRAFEGRRLL  197


>gi|302544192|ref|ZP_07296534.1| recombination protein RecR [Streptomyces hygroscopicus ATCC 53653]
 gi|302461810|gb|EFL24903.1| recombination protein RecR [Streptomyces himastatinicus ATCC 
53653]
Length=199

 Score =  288 bits (736),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 138/202 (69%), Positives = 171/202 (85%), Gaps = 5/202 (2%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EG VQDLIDELG+LPG+GPKSAQRIAFH+L  EP+D+ RL   L +V++ VRFCAVCG
Sbjct  1    MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQSEPTDVRRLAHALTEVKEKVRFCAVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NV++ E+CR+C D RRD +V+C+VEEPKD+ A+ERTREFRGRYHVLGGA+ P+ G+GPD 
Sbjct  61   NVAEAEQCRVCQDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+R+     D  VTE+I+ATDPN EGEATATYL RM++ + GL VTR+ASGLP+
Sbjct  121  LRIRELLARLA----DGTVTELILATDPNLEGEATATYLARMIKPM-GLKVTRLASGLPV  175

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLE+ADE+TLGRA  GRR+L
Sbjct  176  GGDLEYADEVTLGRAFEGRRLL  197


>gi|254385607|ref|ZP_05000932.1| recombination protein recR [Streptomyces sp. Mg1]
 gi|194344477|gb|EDX25443.1| recombination protein recR [Streptomyces sp. Mg1]
Length=199

 Score =  288 bits (736),  Expect = 5e-76, Method: Compositional matrix adjust.
 Identities = 139/202 (69%), Positives = 170/202 (85%), Gaps = 5/202 (2%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EG VQDLIDELG+LPG+GPKSAQRIAFH+L  EP+D+ RL   L +V+D VRFCAVCG
Sbjct  1    MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKDKVRFCAVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NV+  ERC IC D RRD +V+C+VEEPKD+ A+ERTREFRG+YHVLGGA+ P+ G+GPD 
Sbjct  61   NVAQEERCTICRDPRRDTTVICVVEEPKDVVAIERTREFRGKYHVLGGAISPIEGVGPDD  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+R+ + V    VTE+I+ATDPN EGEATATYL RM++ + GL VTR+ASGLP+
Sbjct  121  LRIRELLARLADGV----VTELILATDPNLEGEATATYLARMIKPM-GLKVTRLASGLPV  175

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLE+ADE+TLGRA  GRR+L
Sbjct  176  GGDLEYADEVTLGRAFEGRRLL  197


>gi|213966435|ref|ZP_03394612.1| recombination protein RecR [Corynebacterium amycolatum SK46]
 gi|213950928|gb|EEB62333.1| recombination protein RecR [Corynebacterium amycolatum SK46]
Length=208

 Score =  287 bits (734),  Expect = 7e-76, Method: Compositional matrix adjust.
 Identities = 141/205 (69%), Positives = 164/205 (80%), Gaps = 6/205 (2%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            MFEGP+QDLIDE  +LPGIGPKSAQRIAF+L+  EP DI RL   L +VR+GV+FC VCG
Sbjct  1    MFEGPLQDLIDEFSRLPGIGPKSAQRIAFYLMKAEPEDIGRLQSALGRVREGVQFCRVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            N+S+ + C+ CSD RRD  +VC+VEE +DIQA+ERT E+ GRYHVLGGALDPL GIGP++
Sbjct  61   NISETDVCQYCSDTRRDRGLVCVVEEARDIQAIERTGEYNGRYHVLGGALDPLGGIGPNE  120

Query  121  LRIRELLSRIGERVDDVDVT------EVIIATDPNTEGEATATYLVRMLRDIPGLTVTRI  174
            L IR LL RI   +DDVD T      EVIIATDPNTEGEATATYL R+LRD P L VTR+
Sbjct  121  LNIRTLLQRIAGVLDDVDETQPPEIHEVIIATDPNTEGEATATYLARLLRDFPDLEVTRL  180

Query  175  ASGLPMGGDLEFADELTLGRALAGR  199
            ASG+P+GGDLEF DELTL RAL GR
Sbjct  181  ASGMPLGGDLEFVDELTLSRALTGR  205


>gi|239989505|ref|ZP_04710169.1| recombination protein RecR [Streptomyces roseosporus NRRL 11379]
 gi|291446523|ref|ZP_06585913.1| recombination protein recR [Streptomyces roseosporus NRRL 15998]
 gi|291349470|gb|EFE76374.1| recombination protein recR [Streptomyces roseosporus NRRL 15998]
Length=199

 Score =  286 bits (731),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 139/202 (69%), Positives = 168/202 (84%), Gaps = 5/202 (2%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EG VQDLIDELG+LPG+GPKSAQRIAFH+L  EP+D+ RL   L +V+D VRFC VCG
Sbjct  1    MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAHALLEVKDKVRFCEVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NV+  ERC IC D RRD SV+C+VEEPKD+ A+ERTREFRGRYHVLGGA+ P+ G+GPD 
Sbjct  61   NVAQQERCGICRDARRDPSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+R+     D  +TE+I+ATDPN EGEATATYL RM++ + GL VTR+ASGLP+
Sbjct  121  LRIRELLARLA----DGSITELILATDPNLEGEATATYLARMVKPM-GLKVTRLASGLPV  175

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLE+ADE+TLGRA  GRR+L
Sbjct  176  GGDLEYADEVTLGRAFEGRRLL  197


>gi|345016266|ref|YP_004818620.1| Recombination protein recR [Streptomyces violaceusniger Tu 4113]
 gi|344042615|gb|AEM88340.1| Recombination protein recR [Streptomyces violaceusniger Tu 4113]
Length=199

 Score =  286 bits (731),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 137/202 (68%), Positives = 170/202 (85%), Gaps = 5/202 (2%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EG VQDLIDELG+LPG+GPKSAQRIAFH+L  EP+D+ RL   L +V++ VRFCAVCG
Sbjct  1    MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQSEPTDVRRLAHALTQVKEKVRFCAVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NV++ E+CR+C D RRD +++C+VEEPKD+ A+ERTREFRGRYHVLGGA+ P+ G+GPD 
Sbjct  61   NVAEAEQCRVCQDPRRDRAIICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL R+     D  VTE+I+ATDPN EGEATATYL RM++ + GL VTR+ASGLP+
Sbjct  121  LRIRELLGRLA----DGTVTELILATDPNLEGEATATYLARMIKPM-GLKVTRLASGLPV  175

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLE+ADE+TLGRA  GRR+L
Sbjct  176  GGDLEYADEVTLGRAFEGRRLL  197


>gi|295837978|ref|ZP_06824911.1| recombination protein RecR [Streptomyces sp. SPB74]
 gi|197699471|gb|EDY46404.1| recombination protein RecR [Streptomyces sp. SPB74]
Length=199

 Score =  286 bits (731),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 139/202 (69%), Positives = 168/202 (84%), Gaps = 5/202 (2%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EG VQDLIDELG+LPG+GPKSAQRIAFH+L  EP+D+ RL   L +V+  VRFCAVCG
Sbjct  1    MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQTEPADVRRLANALMEVKAKVRFCAVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NV+  ERC IC D RRD +V+C+VEEPKD+ A+ERTREFRGRYHVLGGA+ P+ G+GPD 
Sbjct  61   NVAQEERCNICRDPRRDPAVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+R+     D  VTE+I+ATDPN EGEATATYL RM++ + GL VTR+ASGLP+
Sbjct  121  LRIRELLARLA----DGTVTELILATDPNLEGEATATYLARMIKPM-GLRVTRLASGLPV  175

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLE+ADE+TLGRA  GRR+L
Sbjct  176  GGDLEYADEVTLGRAFEGRRLL  197


>gi|21222034|ref|NP_627813.1| recombination protein RecR [Streptomyces coelicolor A3(2)]
 gi|289770774|ref|ZP_06530152.1| recombination protein RecR [Streptomyces lividans TK24]
 gi|6685844|sp|Q9XAI4.1|RECR_STRCO RecName: Full=Recombination protein recR
 gi|5748805|gb|AAD34032.2|AF151381_2 recombination protein RecR [Streptomyces coelicolor A3(2)]
 gi|5123893|emb|CAB45485.1| putative recomination protein [Streptomyces coelicolor A3(2)]
 gi|289700973|gb|EFD68402.1| recombination protein RecR [Streptomyces lividans TK24]
Length=199

 Score =  284 bits (726),  Expect = 5e-75, Method: Compositional matrix adjust.
 Identities = 138/202 (69%), Positives = 166/202 (83%), Gaps = 5/202 (2%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EG VQDLIDELG+LPG+GPKSAQRIAFH+L  EP D+ RL   L +V+  VRFCA CG
Sbjct  1    MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPVDVRRLAQALMEVKAKVRFCATCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NV+  E+C IC D RRD SV+C+VEEPKD+ A+ERTREFRGRYHVLGGA+ P+ G+GPD 
Sbjct  61   NVAQEEQCNICRDTRRDPSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIDGVGPDD  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+R+     D  VTE+I+ATDPN EGEATATYL RM++ + GL VTR+ASGLP+
Sbjct  121  LRIRELLARLA----DGSVTELILATDPNLEGEATATYLARMIKPM-GLKVTRLASGLPV  175

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLE+ADE+TLGRA  GRR+L
Sbjct  176  GGDLEYADEVTLGRAFEGRRLL  197


>gi|294630548|ref|ZP_06709108.1| recombination protein RecR [Streptomyces sp. e14]
 gi|292833881|gb|EFF92230.1| recombination protein RecR [Streptomyces sp. e14]
Length=199

 Score =  284 bits (726),  Expect = 6e-75, Method: Compositional matrix adjust.
 Identities = 139/202 (69%), Positives = 167/202 (83%), Gaps = 5/202 (2%)

Query  1    MFEGPVQDLIDELGKLPGIGPKSAQRIAFHLLSVEPSDIDRLTGVLAKVRDGVRFCAVCG  60
            M+EG VQDLIDELG+LPG+GPKSAQRIAFH+L  EP+D+ RL   L +V+  VRFCAVCG
Sbjct  1    MYEGVVQDLIDELGRLPGVGPKSAQRIAFHILQAEPTDVRRLAQALMEVKAKVRFCAVCG  60

Query  61   NVSDNERCRICSDIRRDASVVCIVEEPKDIQAVERTREFRGRYHVLGGALDPLSGIGPDQ  120
            NV+  E C IC D RRD SV+C+VEEPKD+ A+ERTREFRGRYHVLGGA+ P+ G+GPD 
Sbjct  61   NVAQEELCGICRDSRRDQSVICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDD  120

Query  121  LRIRELLSRIGERVDDVDVTEVIIATDPNTEGEATATYLVRMLRDIPGLTVTRIASGLPM  180
            LRIRELL+R+     D  VTE+I+ATDPN EGEATATYL RM++ + GL VTR+ASGLP+
Sbjct  121  LRIRELLARLA----DGTVTELILATDPNLEGEATATYLARMIKPM-GLKVTRLASGLPV  175

Query  181  GGDLEFADELTLGRALAGRRVL  202
            GGDLE+ADE+TLGRA  GRR+L
Sbjct  176  GGDLEYADEVTLGRAFEGRRLL  197



Lambda     K      H
   0.322    0.142    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 223603106580


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40