BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3723 Length=254 Score E Sequences producing significant alignments: (Bits) Value gi|15610859|ref|NP_218240.1| transmembrane protein [Mycobacteriu... 502 2e-140 gi|340628697|ref|YP_004747149.1| hypothetical protein MCAN_37451... 502 2e-140 gi|298527200|ref|ZP_07014609.1| conserved hypothetical protein [... 499 1e-139 gi|15828260|ref|NP_302523.1| hypothetical protein ML2337 [Mycoba... 297 8e-79 gi|118619470|ref|YP_907802.1| hypothetical protein MUL_4318 [Myc... 255 3e-66 gi|183985211|ref|YP_001853502.1| hypothetical protein MMAR_5242 ... 255 4e-66 gi|240171033|ref|ZP_04749692.1| putative transmembrane protein [... 253 2e-65 gi|145221871|ref|YP_001132549.1| hypothetical protein Mflv_1279 ... 251 7e-65 gi|296166817|ref|ZP_06849235.1| conserved hypothetical protein [... 248 4e-64 gi|254818501|ref|ZP_05223502.1| hypothetical protein MintA_01184... 244 1e-62 gi|120406479|ref|YP_956308.1| hypothetical protein Mvan_5536 [My... 234 6e-60 gi|342859927|ref|ZP_08716579.1| hypothetical protein MCOL_13645 ... 234 7e-60 gi|254773384|ref|ZP_05214900.1| hypothetical protein MaviaA2_017... 224 9e-57 gi|336460785|gb|EGO39671.1| hypothetical protein MAPs_37260 [Myc... 224 1e-56 gi|41406422|ref|NP_959258.1| hypothetical protein MAP0324 [Mycob... 224 1e-56 gi|118470427|ref|YP_890506.1| hypothetical protein MSMEG_6288 [M... 214 8e-54 gi|126437842|ref|YP_001073533.1| hypothetical protein Mjls_5279 ... 202 5e-50 gi|118465404|ref|YP_879665.1| hypothetical protein MAV_0378 [Myc... 202 5e-50 gi|108801874|ref|YP_642071.1| hypothetical protein Mmcs_4911 [My... 200 2e-49 gi|333992653|ref|YP_004525267.1| hypothetical protein JDM601_401... 160 1e-37 gi|169627388|ref|YP_001701037.1| hypothetical protein MAB_0283c ... 152 4e-35 gi|341878512|gb|EGT34447.1| CBN-TAG-279 protein [Caenorhabditis ... 47.8 0.002 gi|255284218|ref|ZP_05348773.1| glycogen synthase [Bryantella fo... 37.7 1.5 >gi|15610859|ref|NP_218240.1| transmembrane protein [Mycobacterium tuberculosis H37Rv] gi|15843344|ref|NP_338381.1| hypothetical protein MT3826 [Mycobacterium tuberculosis CDC1551] gi|31794895|ref|NP_857388.1| transmembrane protein [Mycobacterium bovis AF2122/97] 76 more sequence titles Length=254 Score = 502 bits (1293), Expect = 2e-140, Method: Compositional matrix adjust. Identities = 254/254 (100%), Positives = 254/254 (100%), Gaps = 0/254 (0%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV Sbjct 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA Sbjct 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKKTAKGDEAEPEAAEEAENT 180 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKKTAKGDEAEPEAAEEAENT Sbjct 121 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKKTAKGDEAEPEAAEEAENT 180 Query 181 ELAAQEDEEAVEAPPESIESPGGEPESATREAPAAETATAEEPRGGLRNRRPTGKTSHRR 240 ELAAQEDEEAVEAPPESIESPGGEPESATREAPAAETATAEEPRGGLRNRRPTGKTSHRR Sbjct 181 ELAAQEDEEAVEAPPESIESPGGEPESATREAPAAETATAEEPRGGLRNRRPTGKTSHRR 240 Query 241 RRTRSGVQVAKVDE 254 RRTRSGVQVAKVDE Sbjct 241 RRTRSGVQVAKVDE 254 >gi|340628697|ref|YP_004747149.1| hypothetical protein MCAN_37451 [Mycobacterium canettii CIPT 140010059] gi|340006887|emb|CCC46076.1| putative conserved transmembrane protein [Mycobacterium canettii CIPT 140010059] Length=254 Score = 502 bits (1292), Expect = 2e-140, Method: Compositional matrix adjust. Identities = 253/254 (99%), Positives = 254/254 (100%), Gaps = 0/254 (0%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGAL+GLAALPVV Sbjct 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALIGLAALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA Sbjct 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKKTAKGDEAEPEAAEEAENT 180 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKKTAKGDEAEPEAAEEAENT Sbjct 121 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKKTAKGDEAEPEAAEEAENT 180 Query 181 ELAAQEDEEAVEAPPESIESPGGEPESATREAPAAETATAEEPRGGLRNRRPTGKTSHRR 240 ELAAQEDEEAVEAPPESIESPGGEPESATREAPAAETATAEEPRGGLRNRRPTGKTSHRR Sbjct 181 ELAAQEDEEAVEAPPESIESPGGEPESATREAPAAETATAEEPRGGLRNRRPTGKTSHRR 240 Query 241 RRTRSGVQVAKVDE 254 RRTRSGVQVAKVDE Sbjct 241 RRTRSGVQVAKVDE 254 >gi|298527200|ref|ZP_07014609.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298496994|gb|EFI32288.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=254 Score = 499 bits (1285), Expect = 1e-139, Method: Compositional matrix adjust. Identities = 253/254 (99%), Positives = 253/254 (99%), Gaps = 0/254 (0%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV Sbjct 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA Sbjct 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKKTAKGDEAEPEAAEEAENT 180 AAAIAVLGFFGFYLSFVAELP PPPKPLKPKKPKQRRLRRKKTAKGDEAEPEAAEEAENT Sbjct 121 AAAIAVLGFFGFYLSFVAELPAPPPKPLKPKKPKQRRLRRKKTAKGDEAEPEAAEEAENT 180 Query 181 ELAAQEDEEAVEAPPESIESPGGEPESATREAPAAETATAEEPRGGLRNRRPTGKTSHRR 240 ELAAQEDEEAVEAPPESIESPGGEPESATREAPAAETATAEEPRGGLRNRRPTGKTSHRR Sbjct 181 ELAAQEDEEAVEAPPESIESPGGEPESATREAPAAETATAEEPRGGLRNRRPTGKTSHRR 240 Query 241 RRTRSGVQVAKVDE 254 RRTRSGVQVAKVDE Sbjct 241 RRTRSGVQVAKVDE 254 >gi|15828260|ref|NP_302523.1| hypothetical protein ML2337 [Mycobacterium leprae TN] gi|221230737|ref|YP_002504153.1| hypothetical protein MLBr_02337 [Mycobacterium leprae Br4923] gi|3150101|emb|CAA19153.1| hypothetical protein MLCB2407.13c [Mycobacterium leprae] gi|13093953|emb|CAC31853.1| putative membrane protein [Mycobacterium leprae] gi|219933844|emb|CAR72435.1| putative membrane protein [Mycobacterium leprae Br4923] Length=250 Score = 297 bits (761), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 163/253 (65%), Positives = 186/253 (74%), Gaps = 9/253 (3%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 MG KVA LWHASFSIGAGVLYFYFVLPRWPEL+G+T H+LGT LRI TG L GLAALPVV Sbjct 1 MGYKVATLWHASFSIGAGVLYFYFVLPRWPELIGETTHTLGTTLRIVTGVLFGLAALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 FTLLR++ ELG PQLALS+R WSI+AHVL+G LIV TAI E+WLS D A Q LFGIYGA Sbjct 61 FTLLRSQTSELGIPQLALSIRTWSIVAHVLSGVLIVSTAIGEIWLSSDTAVQCLFGIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKKTAKGDEAEPEAAEEAENT 180 AAA AVLGF FYLSFVA LPPP PKP+K KK QRR+RR+K K +EAE E A+ E+ Sbjct 121 AAASAVLGFVAFYLSFVAALPPPSPKPVKLKKANQRRIRRRKGRKDNEAEDEEADAGEHN 180 Query 181 ELAAQEDEEAVEAPPESIESPGGEPESATREAP----AAETATAEEPRGGLRNRRPTGKT 236 E E V + E+P PES ++ P A +T +EPR GL NRRPTGK Sbjct 181 EAETPAQAEEVTS-----ENPQPAPESGAQKEPDELLANKTEETDEPRRGLHNRRPTGKV 235 Query 237 SHRRRRTRSGVQV 249 SH+RRR RSG+ V Sbjct 236 SHQRRRARSGIAV 248 >gi|118619470|ref|YP_907802.1| hypothetical protein MUL_4318 [Mycobacterium ulcerans Agy99] gi|118571580|gb|ABL06331.1| conserved membrane protein [Mycobacterium ulcerans Agy99] Length=271 Score = 255 bits (652), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 143/170 (85%), Positives = 156/170 (92%), Gaps = 1/170 (0%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 MGRKVA+LWHASFSIGAGVLYF+FV+PRWPELMGDT HSLGTGLRI GAL GLAALPVV Sbjct 1 MGRKVAMLWHASFSIGAGVLYFFFVVPRWPELMGDTAHSLGTGLRITAGALFGLAALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 FTLLRTRKPELGTP LALS+R WSI+AHVLAG LI+GTAISE+WLSLD+ GQWLFGIYGA Sbjct 61 FTLLRTRKPELGTPALALSIRTWSIVAHVLAGVLIIGTAISEIWLSLDSVGQWLFGIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKKTAKGDEAE 170 AAAIAVLGFF FYLSFVAELPPPPPKP+K K+PKQRR RRKK +GD+ + Sbjct 121 AAAIAVLGFFAFYLSFVAELPPPPPKPIKVKEPKQRR-RRKKGGEGDDVD 169 >gi|183985211|ref|YP_001853502.1| hypothetical protein MMAR_5242 [Mycobacterium marinum M] gi|183178537|gb|ACC43647.1| conserved membrane protein [Mycobacterium marinum M] Length=280 Score = 255 bits (652), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 144/169 (86%), Positives = 155/169 (92%), Gaps = 1/169 (0%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 MGRKVA+LWHASFSIGAGVLYF+FVLPRWPELMGDT HSLGTGLRI GAL GLAALPVV Sbjct 1 MGRKVAMLWHASFSIGAGVLYFFFVLPRWPELMGDTAHSLGTGLRITAGALFGLAALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 FTLLRTRKPELGTP LALS+R WSI+AHVLAG LI+GTAISE+WLSLD+ GQWLFGIYGA Sbjct 61 FTLLRTRKPELGTPALALSIRTWSIVAHVLAGVLIIGTAISEIWLSLDSVGQWLFGIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKKTAKGDEA 169 AAAIAVLGFF FYLSFVAELPPPPPKP+K K+PKQRR RRKK +GD+ Sbjct 121 AAAIAVLGFFAFYLSFVAELPPPPPKPIKVKEPKQRR-RRKKGDEGDDV 168 >gi|240171033|ref|ZP_04749692.1| putative transmembrane protein [Mycobacterium kansasii ATCC 12478] Length=286 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 137/162 (85%), Positives = 148/162 (92%), Gaps = 0/162 (0%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 M RK AV+WHASFSI AG+LYFYFVLPRW ELMG+T H+LGT LRI GAL+GLAALPVV Sbjct 1 MRRKWAVVWHASFSIAAGLLYFYFVLPRWFELMGETSHALGTTLRIVAGALIGLAALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 FTLLRTRKPELGTPQLALS+R WSI+AHVLAG LI+GTAISE+WLSLD+AGQWLFGIYGA Sbjct 61 FTLLRTRKPELGTPQLALSIRTWSIVAHVLAGVLIIGTAISEIWLSLDSAGQWLFGIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKK 162 AAAI VLGFF FYLSFVAELPPPPPKPLKPK KQRR+RRKK Sbjct 121 AAAIGVLGFFAFYLSFVAELPPPPPKPLKPKATKQRRIRRKK 162 >gi|145221871|ref|YP_001132549.1| hypothetical protein Mflv_1279 [Mycobacterium gilvum PYR-GCK] gi|315446394|ref|YP_004079273.1| hypothetical protein Mspyr1_49040 [Mycobacterium sp. Spyr1] gi|145214357|gb|ABP43761.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315264697|gb|ADU01439.1| hypothetical protein Mspyr1_49040 [Mycobacterium sp. Spyr1] Length=245 Score = 251 bits (641), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 152/251 (61%), Positives = 177/251 (71%), Gaps = 10/251 (3%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 MGR AV+WHASFSI AGVLYF+FVLPR PEL+GDT H+LGT LRI GAL+GLAALPVV Sbjct 1 MGRTAAVIWHASFSIAAGVLYFFFVLPRTPELLGDTSHTLGTALRIVAGALIGLAALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 FTLLRTR+PE GTP+LAL++R SI HVLA ALIVGTAISE+WLS+D+AGQWLFGIYGA Sbjct 61 FTLLRTRRPEFGTPKLALNLRTASIALHVLAAALIVGTAISEIWLSVDSAGQWLFGIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKKTAKGDEAEPEAAEEAENT 180 AAAI +LG F FYL+FVAELPPPPPKPLK K R + KGD +E A E Sbjct 121 AAAIGLLGIFAFYLAFVAELPPPPPKPLKATK------RTGRGRKGDGSEDSADVEGSEG 174 Query 181 ELAAQEDEEAVEAPPESIESPGGEPESATREAPAAETATAEEPRGGLRNRRPTGKTS--H 238 E+ E + V G + E A A ++ A++ G LRNRRPTGK + Sbjct 175 EVLESERTDGVTDADVDTGENGVKAEDAP--AAVSDADDADDADGKLRNRRPTGKGTGLG 232 Query 239 RRRRTRSGVQV 249 RR+RTR GV V Sbjct 233 RRKRTRGGVAV 243 >gi|296166817|ref|ZP_06849235.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897833|gb|EFG77421.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=273 Score = 248 bits (634), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 159/254 (63%), Positives = 180/254 (71%), Gaps = 15/254 (5%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 MGRK+AV WH FS AG LYF+FVLPRWPELMGDT H+LGT LRIATGAL GLAALPVV Sbjct 1 MGRKIAVPWHLLFSFAAGALYFFFVLPRWPELMGDTTHTLGTALRIATGALFGLAALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 F L R RKPELGTPQLAL++R+ SI+ HVLAG LI+GTAISE+WLSLDAAGQ+LF IYGA Sbjct 61 FNLSRVRKPELGTPQLALNLRVASIVCHVLAGVLIIGTAISEIWLSLDAAGQYLFAIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKKTAKGDEAEPEAAEEAEN- 179 AAA+AVLGFF FYLSFVAELPPPPPKP+K KKPK RRLRRKK A+ DEAE A+E ++ Sbjct 121 AAAVAVLGFFAFYLSFVAELPPPPPKPIKEKKPKTRRLRRKKGAEADEAEDTEADEVDDA 180 Query 180 ----------TELAAQEDEEAVEAPPESIESPGGEPESATREAPAAETAT----AEEPRG 225 E + E A PE++ + E AE E + Sbjct 181 EAAEATEAVEAEDTEEAAETAETEQPETVTAEAPEATEEPPAEETAEAGEETEHTEAAQA 240 Query 226 GLRNRRPTGKTSHR 239 LRNRRPTGK SHR Sbjct 241 RLRNRRPTGKGSHR 254 >gi|254818501|ref|ZP_05223502.1| hypothetical protein MintA_01184 [Mycobacterium intracellulare ATCC 13950] Length=276 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 166/254 (66%), Positives = 192/254 (76%), Gaps = 18/254 (7%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 MGRKVA+LWHASF+I AG LYF+FVLPRWPELMGDT HSLGT LRI TGALV LAALPVV Sbjct 1 MGRKVAILWHASFTIAAGFLYFFFVLPRWPELMGDTAHSLGTALRIVTGALVALAALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 FTLLRTRKPELGTPQ+ALS+R+ SI+AHVLAG LIVGTAISE+WLSLD AG+WLFGIYGA Sbjct 61 FTLLRTRKPELGTPQMALSIRVASIVAHVLAGVLIVGTAISEIWLSLDVAGRWLFGIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRR---LRRKKTAKGDEAEPEAAEEA 177 AAAIA+LGFF FYLSFVAELPPPPPKP+K KKPK+ + LRRKK + DEA A+EA Sbjct 121 AAAIALLGFFAFYLSFVAELPPPPPKPIKAKKPKKAKKGGLRRKKGEEADEAGE--ADEA 178 Query 178 ENTELAAQEDEEAVEAPPESIE------------SPGGEPESATREAPAAE-TATAEEPR 224 ++ + A + +E E+ E + + T AP A+ T +EEPR Sbjct 179 DSADEAGEAEEADAVTEAEASEPDETDAATDAAAEAAPDEPAETEVAPVADATEESEEPR 238 Query 225 GGLRNRRPTGKTSH 238 L+NRRPTGK SH Sbjct 239 TKLQNRRPTGKGSH 252 >gi|120406479|ref|YP_956308.1| hypothetical protein Mvan_5536 [Mycobacterium vanbaalenii PYR-1] gi|119959297|gb|ABM16302.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=252 Score = 234 bits (598), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 151/252 (60%), Positives = 181/252 (72%), Gaps = 5/252 (1%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 MGR VAV+WHASFSI AGVLYF+FVLPR PEL+GDT +LGT LR+ GAL+GLAALPVV Sbjct 1 MGRTVAVIWHASFSIAAGVLYFFFVLPRTPELVGDTSPTLGTVLRVVVGALIGLAALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 FTLLRTR+PE GTPQ+AL++R SI HVL+G LIVG A++E+W+SLD+AGQWLFGIYGA Sbjct 61 FTLLRTRRPEFGTPQMALNLRTTSIALHVLSGVLIVGAAVAEIWISLDSAGQWLFGIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKKTAKGDEAEPEAAE-EAEN 179 AAA+A+LG FYL+FVAELPPPPPKPLK KK K RR R + A+ E A+ E E Sbjct 121 AAAVALLGVLAFYLAFVAELPPPPPKPLKVKKRKSRRGRSDAAEDTETADAETADAEVEE 180 Query 180 TELAAQEDEEAVEAPPESIESPGGEPESATREAPAAETATAEEPRGGLRNRRPTGKTS-- 237 TE A E E ++ EP + PA++ T E G L+NRRPTGK + Sbjct 181 TETADAETESVTPDADADADADAEEPVPTAEDDPASD--TPESGDGKLQNRRPTGKGAVL 238 Query 238 HRRRRTRSGVQV 249 RR+RTR GV V Sbjct 239 GRRKRTRGGVAV 250 >gi|342859927|ref|ZP_08716579.1| hypothetical protein MCOL_13645 [Mycobacterium colombiense CECT 3035] gi|342132305|gb|EGT85534.1| hypothetical protein MCOL_13645 [Mycobacterium colombiense CECT 3035] Length=276 Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 135/162 (84%), Positives = 150/162 (93%), Gaps = 0/162 (0%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 MGRKVA+ WHASFSI G LYF+FVLPRWPELMGDT H+LGT +RI TGALV LAALPVV Sbjct 1 MGRKVAIPWHASFSIAVGFLYFFFVLPRWPELMGDTAHTLGTAMRIVTGALVALAALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 FTLLR+RKPELGTPQLALS+R+WSI+AHVLAG LI+GTAISE+WLSLDAAG+WLFGIYGA Sbjct 61 FTLLRSRKPELGTPQLALSIRVWSIVAHVLAGVLIIGTAISEIWLSLDAAGRWLFGIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKK 162 AAAIA+LG F FYLSFVAELPPPPPKP+K KKPK+RR+RRKK Sbjct 121 AAAIALLGIFAFYLSFVAELPPPPPKPIKAKKPKERRVRRKK 162 >gi|254773384|ref|ZP_05214900.1| hypothetical protein MaviaA2_01711 [Mycobacterium avium subsp. avium ATCC 25291] Length=277 Score = 224 bits (571), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 118/140 (85%), Positives = 128/140 (92%), Gaps = 0/140 (0%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 MGRKVA+ WHASFSI AGVLYF+FVLPRWPELMGDT HSLGT LRI G LV LAALPVV Sbjct 1 MGRKVAIPWHASFSIAAGVLYFFFVLPRWPELMGDTTHSLGTALRIVAGVLVALAALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 FTLLRTRKPELGTPQLALS+R+ SI+AHVLAG LI+GTA+SE+WLSLDAAG+WLFGIYGA Sbjct 61 FTLLRTRKPELGTPQLALSLRVASIVAHVLAGLLIIGTAVSEIWLSLDAAGRWLFGIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAEL 140 AAAIA+LG F FYLSFVAEL Sbjct 121 AAAIALLGIFAFYLSFVAEL 140 >gi|336460785|gb|EGO39671.1| hypothetical protein MAPs_37260 [Mycobacterium avium subsp. paratuberculosis S397] Length=277 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 118/140 (85%), Positives = 128/140 (92%), Gaps = 0/140 (0%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 MGRKVA+ WHASFSI AGVLYF+FVLPRWPELMGDT HSLGT LRI G LV LAALPVV Sbjct 1 MGRKVAIPWHASFSIAAGVLYFFFVLPRWPELMGDTTHSLGTALRIVAGVLVALAALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 FTLLRTRKPELGTPQLALS+R+ SI+AHVLAG LI+GTA+SE+WLSLDAAG+WLFGIYGA Sbjct 61 FTLLRTRKPELGTPQLALSLRVASIVAHVLAGLLIIGTAVSEIWLSLDAAGRWLFGIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAEL 140 AAAIA+LG F FYLSFVAEL Sbjct 121 AAAIALLGIFAFYLSFVAEL 140 >gi|41406422|ref|NP_959258.1| hypothetical protein MAP0324 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394771|gb|AAS02641.1| hypothetical protein MAP_0324 [Mycobacterium avium subsp. paratuberculosis K-10] Length=277 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 118/140 (85%), Positives = 128/140 (92%), Gaps = 0/140 (0%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 MGRKVA+ WHASFSI AGVLYF+FVLPRWPELMGDT HSLGT LRI G LV LAALPVV Sbjct 1 MGRKVAIPWHASFSIAAGVLYFFFVLPRWPELMGDTTHSLGTALRIVAGVLVALAALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 FTLLRTRKPELGTPQLALS+R+ SI+AHVLAG LI+GTA+SE+WLSLDAAG+WLFGIYGA Sbjct 61 FTLLRTRKPELGTPQLALSLRVASIVAHVLAGLLIIGTAVSEIWLSLDAAGRWLFGIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAEL 140 AAAIA+LG F FYLSFVAEL Sbjct 121 AAAIALLGIFAFYLSFVAEL 140 >gi|118470427|ref|YP_890506.1| hypothetical protein MSMEG_6288 [Mycobacterium smegmatis str. MC2 155] gi|118171714|gb|ABK72610.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=293 Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 145/274 (53%), Positives = 180/274 (66%), Gaps = 37/274 (13%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 MGR VAV WH + ++ A L+F+FV+PRWPELMG+T +LGT LRI TG LV L ALPVV Sbjct 1 MGRTVAVTWHVASTLIAAGLFFFFVIPRWPELMGETSPTLGTVLRIVTGVLVALTALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 FTLLRTR+PELGTP+LAL +R SI+ HVLAG LIVGTAI+E+W+SLD+AG WLFGIYGA Sbjct 61 FTLLRTRRPELGTPELALRLRTTSIVFHVLAGVLIVGTAIAEIWVSLDSAGSWLFGIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRR--KKTAKGDEAEPEAAEEAE 178 AAA+A+LG FGFYL+F+AELPPPPPKP+KPK RR R K TA DE + +AA+E E Sbjct 121 AAALALLGAFGFYLAFIAELPPPPPKPVKPKVNAVRRNTRAAKDTADADEIDKDAADEDE 180 Query 179 --------------------------NTELAAQEDEEAVEAPPESIESPGG--------E 204 + E A Q D+E +A E+ + P E Sbjct 181 AGEGEDATERAEDSADEPSDDTAVEASDEDADQTDDETEDATSENNDEPRAAEPESKAVE 240 Query 205 PESATREAPAAETATAEEPRGG-LRNRRPTGKTS 237 PES EA + + A ++ GG LRNRRP+ K + Sbjct 241 PESTAVEAESLDGADTDDSSGGKLRNRRPSNKAN 274 >gi|126437842|ref|YP_001073533.1| hypothetical protein Mjls_5279 [Mycobacterium sp. JLS] gi|126237642|gb|ABO01043.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=252 Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 140/241 (59%), Positives = 166/241 (69%), Gaps = 13/241 (5%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 M R VAV+WHASFS+ A VLYF+FVLPRW ELMG T +LGT LRI T AL+GLAALPVV Sbjct 1 MRRSVAVIWHASFSVIAAVLYFFFVLPRWFELMGSTSPTLGTVLRIVTAALIGLAALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 FTLLRTR+PE GTPQLAL +R SI HVLAG LI+G AISE+WL LD+AG WLFGIYGA Sbjct 61 FTLLRTRRPEFGTPQLALRLRTVSIALHVLAGVLILGAAISEIWLDLDSAGPWLFGIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKKTAKGDEAEPEAAEEAENT 180 AAAIA+LG F FYL+FVAE PPPP K + RR RR K EA+PE ++E+T Sbjct 121 AAAIALLGIFAFYLAFVAE-LPPPPPKPLKPKAQTRRGRR----KAQEADPEDTADSEDT 175 Query 181 ELAAQEDEEAV---EAPPESIESPGGEPESATREAPAAETATAEEP---RGGLRNRRPTG 234 E+ E +A ES+++ G ++ + A EEP GGLRNRRP+G Sbjct 176 TEETTEEAERSESDDAVTESVDT--GSADTDATDETEETEAADEEPVASSGGLRNRRPSG 233 Query 235 K 235 K Sbjct 234 K 234 >gi|118465404|ref|YP_879665.1| hypothetical protein MAV_0378 [Mycobacterium avium 104] gi|118166691|gb|ABK67588.1| conserved hypothetical protein [Mycobacterium avium 104] Length=277 Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 117/140 (84%), Positives = 127/140 (91%), Gaps = 0/140 (0%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 MGRKVA+ WHASFSI AGVLYF+FVLPRWPELMGDT HSLGT LRI G L LAALPVV Sbjct 1 MGRKVAIPWHASFSIAAGVLYFFFVLPRWPELMGDTTHSLGTALRIVAGVLAALAALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 FTLLRTRKPELGTPQLALS+R+ SI+AHVLAG LI+GTA+SE+WLSLDAAG+WLFGIYGA Sbjct 61 FTLLRTRKPELGTPQLALSLRVASIVAHVLAGLLIIGTAVSEIWLSLDAAGRWLFGIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAEL 140 AAAIA+LG F FYLSFVAEL Sbjct 121 AAAIALLGIFAFYLSFVAEL 140 >gi|108801874|ref|YP_642071.1| hypothetical protein Mmcs_4911 [Mycobacterium sp. MCS] gi|119871027|ref|YP_940979.1| hypothetical protein Mkms_5000 [Mycobacterium sp. KMS] gi|108772293|gb|ABG11015.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119697116|gb|ABL94189.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=251 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 138/238 (58%), Positives = 163/238 (69%), Gaps = 8/238 (3%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 M R VAV+WHASFS+ A VLYF+FVLPRW ELMG T +LGT LRI T AL+GLAALPVV Sbjct 1 MRRSVAVIWHASFSVIAAVLYFFFVLPRWFELMGSTSPTLGTVLRIVTAALIGLAALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 FTLLRTR+PE GTPQLAL +R SI HVLAG LI+G AISE+WL LD+AG WLFGIYGA Sbjct 61 FTLLRTRRPEFGTPQLALRLRTVSIALHVLAGVLILGAAISEIWLDLDSAGPWLFGIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKKTAKGDEAEPEAAEEAENT 180 AAAIA+LG F FYL+FVAE PPPP K + RR RR K EA PE ++E+T Sbjct 121 AAAIALLGIFAFYLAFVAE-LPPPPPKPLKPKAQTRRGRR----KAQEAAPEDTADSEDT 175 Query 181 ELAAQEDEEAVEAPP--ESIESPGGEPESATREAPAAETATA-EEPRGGLRNRRPTGK 235 E +E E + P ES+++ G+ ++A GGLRNRRP+GK Sbjct 176 EETTEEAERSESDDPVTESVDTESGDTDAADETEETEAADEEPVASSGGLRNRRPSGK 233 >gi|333992653|ref|YP_004525267.1| hypothetical protein JDM601_4013 [Mycobacterium sp. JDM601] gi|333488621|gb|AEF38013.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=248 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 132/259 (51%), Positives = 158/259 (62%), Gaps = 25/259 (9%) Query 1 MGRKVAVLWHASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAALPVV 60 M R A +WHAS S A +LYF FVLPRW EL G + H LGT +RI G LV ALPVV Sbjct 1 MSRTAATVWHASLSTLAAILYFLFVLPRWWELTGFSPHVLGTVVRIFLGLLVAGTALPVV 60 Query 61 FTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGIYGA 120 TL RKPE GTPQL L++ SI+ HV+AG LI GTAISE+WLSLD AG WLFGIYGA Sbjct 61 ATLRHARKPEYGTPQLTLTLLTGSIVGHVVAGTLIAGTAISEIWLSLDTAGVWLFGIYGA 120 Query 121 AAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKKTAKGDEAEPEAAEEAENT 180 AAAIA+LG FYLSFVA +PPPPPKP+KPK KQ LRR + K + + AA+ E+ Sbjct 121 AAAIALLGIGAFYLSFVAAMPPPPPKPIKPKSEKQSTLRRWRAKKAKKPDAGAADGVEDD 180 Query 181 ELA-----------AQEDEEAVEAPPESIESPGGE--PESATREAPAAETATAEEPRGGL 227 + A ED E+ EA E++E+ ESA EAP + A+E Sbjct 181 DTDEDADEDHDGHDADEDAESGEA-LETVEADSATEVTESAGEEAPELASTGAQE----- 234 Query 228 RNRRPTGKTSHRRRRTRSG 246 RP+GK RR + G Sbjct 235 -KLRPSGK-----RRAKKG 247 >gi|169627388|ref|YP_001701037.1| hypothetical protein MAB_0283c [Mycobacterium abscessus ATCC 19977] gi|169239355|emb|CAM60383.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=216 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 97/205 (48%), Positives = 128/205 (63%), Gaps = 16/205 (7%) Query 2 GRKVAVLW----HASFSIGAGVLYFYFVLPRWPELMGDTGHSLGTGLRIATGALVGLAAL 57 GR+ A + HA+ S+ AG+L+F+FVLPRWPEL G TGH+ GTG+RI G LV A Sbjct 4 GRRTATIVLTSSHAALSLIAGLLFFFFVLPRWPELNGATGHTFGTGMRIVGGLLVAAAGA 63 Query 58 PVVFTLLRTRKPELGTPQLALSMRIWSIMAHVLAGALIVGTAISEVWLSLDAAGQWLFGI 117 PV+ + RTR+PE TP+LAL++R S H LAG LIVGTAI+E+WL LD G W FG Sbjct 64 PVLISWRRTRRPEFATPRLALTLRAASFTGHFLAGVLIVGTAIAEIWLDLDRFGIWEFGG 123 Query 118 YGAAAAIAVLGFFGFYLSFVAELPPPPPKPLKPKKPKQRRLRRKKTAKGDE--------A 169 YGAAAAI +L F ++L+FVAE P P P +P +++L R T D+ + Sbjct 124 YGAAAAIGILAFAAYHLAFVAERPAPERTP----RPAKKKLTRATTENADDSDVDKAIAS 179 Query 170 EPEAAEEAENTELAAQEDEEAVEAP 194 EPEA E A+ + + +E V P Sbjct 180 EPEAREPADEPSGDSPDSDEKVLEP 204 >gi|341878512|gb|EGT34447.1| CBN-TAG-279 protein [Caenorhabditis brenneri] Length=1860 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 37/121 (31%), Positives = 53/121 (44%), Gaps = 15/121 (12%) Query 141 PPPPPKPLKPKKPKQR-----RLRRKKTAKGDEAEPEAAEEAENTELAAQEDEEAVEAPP 195 P P P P K KK K++ + +K +A +AE AE+A +D EA+E P Sbjct 818 PAPKPTPAKSKKSKRKTHFGQKRSKKPSANRKKAEDGEAEKAPEANPIEAKDGEAMEVPK 877 Query 196 ---------ESIESPGGEP-ESATREAPAAETATAEEPRGGLRNRRPTGKTSHRRRRTRS 245 E++E P P E+ EA A A + RGG R ++ K R + S Sbjct 878 ANPIEAEDGEAMEVPEANPIEAEDGEAIEAPAAKPKPKRGGRRGKKAVRKQKGNIRSSTS 937 Query 246 G 246 G Sbjct 938 G 938 >gi|255284218|ref|ZP_05348773.1| glycogen synthase [Bryantella formatexigens DSM 14469] gi|255265243|gb|EET58448.1| glycogen synthase [Bryantella formatexigens DSM 14469] Length=811 Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust. Identities = 35/97 (37%), Positives = 46/97 (48%), Gaps = 14/97 (14%) Query 143 PPPKPLKPKKPKQRRLRRKKTAKGDEAEPEAAEEAENTELAAQEDE------EAVEAPPE 196 P +P K +KPK + R KTAK ++A P AEE + + A+E + EAV+A P Sbjct 56 PKAEPAKEEKPKAKTTRAAKTAKTEKAAPVKAEEVKTEPVKAEEPKAKPAKAEAVKAEPA 115 Query 197 SIESPGGEP--------ESATREAPAAETATAEEPRG 225 E P E E A E E A AEEP+ Sbjct 116 KAEEPKAESVKAEEAKAEPAKTEEAKVEPAKAEEPKA 152 Lambda K H 0.316 0.133 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 371539772520 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40