BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3725
Length=309
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610861|ref|NP_218242.1| oxidoreductase [Mycobacterium tuber... 626 2e-177
gi|289555990|ref|ZP_06445200.1| oxidoreductase [Mycobacterium tu... 592 3e-167
gi|289748243|ref|ZP_06507621.1| LOW QUALITY PROTEIN: oxidoreduct... 502 3e-140
gi|289441161|ref|ZP_06430905.1| oxidoreductase [Mycobacterium tu... 502 3e-140
gi|31794897|ref|NP_857390.1| putative oxidoreductase [Mycobacter... 501 4e-140
gi|289759886|ref|ZP_06519264.1| LOW QUALITY PROTEIN: conserved h... 501 6e-140
gi|294995365|ref|ZP_06801056.1| putative oxidoreductase [Mycobac... 501 6e-140
gi|298527202|ref|ZP_07014611.1| conserved hypothetical protein [... 501 7e-140
gi|289572376|ref|ZP_06452603.1| oxidoreductase [Mycobacterium tu... 501 7e-140
gi|289747564|ref|ZP_06506942.1| conserved hypothetical protein [... 497 8e-139
gi|340628699|ref|YP_004747151.1| putative oxidoreductase [Mycoba... 467 1e-129
gi|254773374|ref|ZP_05214890.1| hypothetical protein MaviaA2_016... 411 5e-113
gi|41406432|ref|NP_959268.1| hypothetical protein MAP0334 [Mycob... 410 1e-112
gi|336460796|gb|EGO39682.1| nucleoside-diphosphate-sugar epimera... 410 1e-112
gi|254818495|ref|ZP_05223496.1| hypothetical protein MintA_01154... 409 3e-112
gi|240171047|ref|ZP_04749706.1| oxidoreductase [Mycobacterium ka... 407 2e-111
gi|342859943|ref|ZP_08716595.1| hypothetical protein MCOL_13725 ... 405 5e-111
gi|296166834|ref|ZP_06849251.1| probable oxidoreductase [Mycobac... 403 2e-110
gi|118619476|ref|YP_907808.1| oxidoreductase [Mycobacterium ulce... 398 5e-109
gi|333990640|ref|YP_004523254.1| oxidoreductase [Mycobacterium s... 369 3e-100
gi|108797852|ref|YP_638049.1| NAD-dependent epimerase/dehydratas... 353 3e-95
gi|126433492|ref|YP_001069183.1| NAD-dependent epimerase/dehydra... 352 3e-95
gi|315444067|ref|YP_004076946.1| nucleoside-diphosphate-sugar ep... 346 3e-93
gi|145223741|ref|YP_001134419.1| NAD-dependent epimerase/dehydra... 345 7e-93
gi|169630054|ref|YP_001703703.1| putative oxidoreductase [Mycoba... 343 1e-92
gi|120404349|ref|YP_954178.1| NAD-dependent epimerase/dehydratas... 343 2e-92
gi|111022856|ref|YP_705828.1| oxidoreductase [Rhodococcus jostii... 291 1e-76
gi|226365364|ref|YP_002783147.1| NAD-dependent epimerase/dehydra... 282 5e-74
gi|54024384|ref|YP_118626.1| putative dehydrogenase [Nocardia fa... 178 1e-42
gi|145595227|ref|YP_001159524.1| NAD-dependent epimerase/dehydra... 174 2e-41
gi|254483004|ref|ZP_05096239.1| 3-beta hydroxysteroid dehydrogen... 168 8e-40
gi|271970061|ref|YP_003344257.1| NAD-dependent epimerase/dehydra... 168 9e-40
gi|315442594|ref|YP_004075473.1| nucleoside-diphosphate-sugar ep... 167 1e-39
gi|145222156|ref|YP_001132834.1| NAD-dependent epimerase/dehydra... 167 2e-39
gi|111020637|ref|YP_703609.1| UDP-glucose 4-epimerase [Rhodococc... 164 2e-38
gi|118471455|ref|YP_890135.1| oxidoreductase [Mycobacterium smeg... 163 4e-38
gi|296166229|ref|ZP_06848668.1| oxidoreductase [Mycobacterium pa... 159 5e-37
gi|226362880|ref|YP_002780660.1| NAD-dependent epimerase/dehydra... 158 1e-36
gi|269128593|ref|YP_003301963.1| NAD-dependent epimerase/dehydra... 158 1e-36
gi|333992290|ref|YP_004524904.1| nucleoside-diphosphate-sugar ep... 155 8e-36
gi|254820307|ref|ZP_05225308.1| NAD-dependent epimerase/dehydrat... 153 4e-35
gi|330467654|ref|YP_004405397.1| NAD-dependent epimerase/dehydra... 152 5e-35
gi|269126060|ref|YP_003299430.1| NAD-dependent epimerase/dehydra... 151 1e-34
gi|120406142|ref|YP_955971.1| NAD-dependent epimerase/dehydratas... 150 2e-34
gi|240168717|ref|ZP_04747376.1| oxidoreductase [Mycobacterium ka... 144 2e-32
gi|126438189|ref|YP_001073880.1| NAD-dependent epimerase/dehydra... 141 2e-31
gi|108802207|ref|YP_642404.1| NAD-dependent epimerase/dehydratas... 137 2e-30
gi|256378122|ref|YP_003101782.1| NAD-dependent epimerase/dehydra... 134 1e-29
gi|271968186|ref|YP_003342382.1| NAD-dependent epimerase/dehydra... 132 7e-29
gi|298251577|ref|ZP_06975380.1| NAD-dependent epimerase/dehydrat... 105 1e-20
>gi|15610861|ref|NP_218242.1| oxidoreductase [Mycobacterium tuberculosis H37Rv]
gi|15843346|ref|NP_338383.1| oxidoreductase [Mycobacterium tuberculosis CDC1551]
gi|148663591|ref|YP_001285114.1| oxidoreductase [Mycobacterium tuberculosis H37Ra]
29 more sequence titles
Length=309
Score = 626 bits (1614), Expect = 2e-177, Method: Compositional matrix adjust.
Identities = 309/309 (100%), Positives = 309/309 (100%), Gaps = 0/309 (0%)
Query 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD
Sbjct 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
Query 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV
Sbjct 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
Query 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP 180
SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP
Sbjct 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP 180
Query 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI
Sbjct 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
Query 241 PVPELAKILGGSPAPRCWPSRCPIPRCVSRDRCWIKPGPICLSILRSPRQVCSTTHRCRS 300
PVPELAKILGGSPAPRCWPSRCPIPRCVSRDRCWIKPGPICLSILRSPRQVCSTTHRCRS
Sbjct 241 PVPELAKILGGSPAPRCWPSRCPIPRCVSRDRCWIKPGPICLSILRSPRQVCSTTHRCRS 300
Query 301 PTIRRAKKN 309
PTIRRAKKN
Sbjct 301 PTIRRAKKN 309
>gi|289555990|ref|ZP_06445200.1| oxidoreductase [Mycobacterium tuberculosis KZN 605]
gi|289440622|gb|EFD23115.1| oxidoreductase [Mycobacterium tuberculosis KZN 605]
Length=293
Score = 592 bits (1525), Expect = 3e-167, Method: Compositional matrix adjust.
Identities = 292/293 (99%), Positives = 293/293 (100%), Gaps = 0/293 (0%)
Query 17 VGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRDSVREALNGCDA 76
+GGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRDSVREALNGCDA
Sbjct 1 MGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRDSVREALNGCDA 60
Query 77 VVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTALFRPNLATLSA 136
VVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTALFRPNLATLSA
Sbjct 61 VVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTALFRPNLATLSA 120
Query 137 DLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQFGEAGEGVRSAL 196
DLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQFGEAGEGVRSAL
Sbjct 121 DLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQFGEAGEGVRSAL 180
Query 197 WMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPELAKILGGSPAPR 256
WMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPELAKILGGSPAPR
Sbjct 181 WMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPELAKILGGSPAPR 240
Query 257 CWPSRCPIPRCVSRDRCWIKPGPICLSILRSPRQVCSTTHRCRSPTIRRAKKN 309
CWPSRCPIPRCVSRDRCWIKPGPICLSILRSPRQVCSTTHRCRSPTIRRAKKN
Sbjct 241 CWPSRCPIPRCVSRDRCWIKPGPICLSILRSPRQVCSTTHRCRSPTIRRAKKN 293
>gi|289748243|ref|ZP_06507621.1| LOW QUALITY PROTEIN: oxidoreductase [Mycobacterium tuberculosis
T92]
gi|339633717|ref|YP_004725359.1| oxidoreductase [Mycobacterium africanum GM041182]
gi|289688830|gb|EFD56259.1| LOW QUALITY PROTEIN: oxidoreductase [Mycobacterium tuberculosis
T92]
gi|339333073|emb|CCC28803.1| putative oxidoreductase [Mycobacterium africanum GM041182]
Length=310
Score = 502 bits (1293), Expect = 3e-140, Method: Compositional matrix adjust.
Identities = 250/250 (100%), Positives = 250/250 (100%), Gaps = 0/250 (0%)
Query 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD
Sbjct 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
Query 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV
Sbjct 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
Query 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP 180
SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP
Sbjct 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP 180
Query 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI
Sbjct 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
Query 241 PVPELAKILG 250
PVPELAKILG
Sbjct 241 PVPELAKILG 250
>gi|289441161|ref|ZP_06430905.1| oxidoreductase [Mycobacterium tuberculosis T46]
gi|289445324|ref|ZP_06435068.1| oxidoreductase [Mycobacterium tuberculosis CPHL_A]
gi|289571969|ref|ZP_06452196.1| oxidoreductase [Mycobacterium tuberculosis T17]
gi|289755856|ref|ZP_06515234.1| hypothetical oxidoreductase [Mycobacterium tuberculosis EAS054]
gi|289414080|gb|EFD11320.1| oxidoreductase [Mycobacterium tuberculosis T46]
gi|289418282|gb|EFD15483.1| oxidoreductase [Mycobacterium tuberculosis CPHL_A]
gi|289545723|gb|EFD49371.1| oxidoreductase [Mycobacterium tuberculosis T17]
gi|289696443|gb|EFD63872.1| hypothetical oxidoreductase [Mycobacterium tuberculosis EAS054]
Length=333
Score = 502 bits (1292), Expect = 3e-140, Method: Compositional matrix adjust.
Identities = 250/250 (100%), Positives = 250/250 (100%), Gaps = 0/250 (0%)
Query 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD
Sbjct 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
Query 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV
Sbjct 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
Query 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP 180
SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP
Sbjct 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP 180
Query 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI
Sbjct 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
Query 241 PVPELAKILG 250
PVPELAKILG
Sbjct 241 PVPELAKILG 250
>gi|31794897|ref|NP_857390.1| putative oxidoreductase [Mycobacterium bovis AF2122/97]
gi|121639641|ref|YP_979865.1| putative oxidoreductase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224992137|ref|YP_002646826.1| putative oxidoreductase [Mycobacterium bovis BCG str. Tokyo 172]
gi|31620495|emb|CAD95938.1| PUTATIVE OXIDOREDUCTASE [Mycobacterium bovis AF2122/97]
gi|121495289|emb|CAL73775.1| Putative oxidoreductase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224775252|dbj|BAH28058.1| putative oxidoreductase [Mycobacterium bovis BCG str. Tokyo 172]
gi|341603662|emb|CCC66343.1| putative oxidoreductase [Mycobacterium bovis BCG str. Moreau
RDJ]
Length=333
Score = 501 bits (1291), Expect = 4e-140, Method: Compositional matrix adjust.
Identities = 250/250 (100%), Positives = 250/250 (100%), Gaps = 0/250 (0%)
Query 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD
Sbjct 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
Query 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV
Sbjct 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
Query 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP 180
SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP
Sbjct 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP 180
Query 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI
Sbjct 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
Query 241 PVPELAKILG 250
PVPELAKILG
Sbjct 241 PVPELAKILG 250
>gi|289759886|ref|ZP_06519264.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T85]
gi|289715450|gb|EFD79462.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T85]
Length=310
Score = 501 bits (1290), Expect = 6e-140, Method: Compositional matrix adjust.
Identities = 249/250 (99%), Positives = 250/250 (100%), Gaps = 0/250 (0%)
Query 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD
Sbjct 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
Query 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV
Sbjct 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
Query 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP 180
SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGM+LGPP
Sbjct 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMLLGPP 180
Query 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI
Sbjct 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
Query 241 PVPELAKILG 250
PVPELAKILG
Sbjct 241 PVPELAKILG 250
>gi|294995365|ref|ZP_06801056.1| putative oxidoreductase [Mycobacterium tuberculosis 210]
gi|326905565|gb|EGE52498.1| oxidoreductase [Mycobacterium tuberculosis W-148]
gi|339296535|gb|AEJ48646.1| putative oxidoreductase [Mycobacterium tuberculosis CCDC5079]
gi|339300135|gb|AEJ52245.1| putative oxidoreductase [Mycobacterium tuberculosis CCDC5180]
Length=333
Score = 501 bits (1290), Expect = 6e-140, Method: Compositional matrix adjust.
Identities = 249/250 (99%), Positives = 250/250 (100%), Gaps = 0/250 (0%)
Query 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD
Sbjct 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
Query 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV
Sbjct 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
Query 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP 180
SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGM+LGPP
Sbjct 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMLLGPP 180
Query 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI
Sbjct 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
Query 241 PVPELAKILG 250
PVPELAKILG
Sbjct 241 PVPELAKILG 250
>gi|298527202|ref|ZP_07014611.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|298496996|gb|EFI32290.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=333
Score = 501 bits (1289), Expect = 7e-140, Method: Compositional matrix adjust.
Identities = 249/250 (99%), Positives = 250/250 (100%), Gaps = 0/250 (0%)
Query 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD
Sbjct 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
Query 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV
Sbjct 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
Query 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP 180
SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGM+LGPP
Sbjct 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMLLGPP 180
Query 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI
Sbjct 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
Query 241 PVPELAKILG 250
PVPELAKILG
Sbjct 241 PVPELAKILG 250
>gi|289572376|ref|ZP_06452603.1| oxidoreductase [Mycobacterium tuberculosis K85]
gi|289536807|gb|EFD41385.1| oxidoreductase [Mycobacterium tuberculosis K85]
Length=333
Score = 501 bits (1289), Expect = 7e-140, Method: Compositional matrix adjust.
Identities = 249/250 (99%), Positives = 249/250 (99%), Gaps = 0/250 (0%)
Query 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD
Sbjct 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
Query 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV
Sbjct 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
Query 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP 180
SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP
Sbjct 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP 180
Query 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDV ALHAALLESGRGPRRYTAGGHRI
Sbjct 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVVALHAALLESGRGPRRYTAGGHRI 240
Query 241 PVPELAKILG 250
PVPELAKILG
Sbjct 241 PVPELAKILG 250
>gi|289747564|ref|ZP_06506942.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289688092|gb|EFD55580.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=333
Score = 497 bits (1280), Expect = 8e-139, Method: Compositional matrix adjust.
Identities = 248/250 (99%), Positives = 249/250 (99%), Gaps = 0/250 (0%)
Query 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD
Sbjct 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
Query 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV
Sbjct 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
Query 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP 180
SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGM+LGP
Sbjct 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMLLGPL 180
Query 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI
Sbjct 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
Query 241 PVPELAKILG 250
PVPELAKILG
Sbjct 241 PVPELAKILG 250
>gi|340628699|ref|YP_004747151.1| putative oxidoreductase [Mycobacterium canettii CIPT 140010059]
gi|340006889|emb|CCC46078.1| putative oxidoreductase [Mycobacterium canettii CIPT 140010059]
Length=333
Score = 467 bits (1201), Expect = 1e-129, Method: Compositional matrix adjust.
Identities = 248/270 (92%), Positives = 252/270 (94%), Gaps = 2/270 (0%)
Query 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
MQNATMRVLVTGGTGFVGGWTAKAIADAG SVRFLVRNPARLKTSVAKLGVDVSDFAVAD
Sbjct 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGRSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
Query 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
ISDRDSVREALNGCDAVVHSAALVATDPRETSRML TNMAGAQNVLGQAVELG+DPIVHV
Sbjct 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLRTNMAGAQNVLGQAVELGLDPIVHV 120
Query 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP 180
SSFTALFRP+L TL+ADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP
Sbjct 121 SSFTALFRPDLKTLAADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP 180
Query 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI
Sbjct 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
Query 241 PVPELAKILGGSPAPRCWPSRCPIPRCVSR 270
PVPELAKILG P P+P R
Sbjct 241 PVPELAKILGEVAGTTMLP--VPVPDSALR 268
>gi|254773374|ref|ZP_05214890.1| hypothetical protein MaviaA2_01651 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=330
Score = 411 bits (1057), Expect = 5e-113, Method: Compositional matrix adjust.
Identities = 207/245 (85%), Positives = 228/245 (94%), Gaps = 0/245 (0%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRD 65
MRVL+TGGTGFVGGWTAKAI+DAGHS+RFLVRNP +L+TSVAKLGVDVSDFAVADI+DR
Sbjct 4 MRVLITGGTGFVGGWTAKAISDAGHSIRFLVRNPGKLQTSVAKLGVDVSDFAVADITDRV 63
Query 66 SVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTA 125
+VREAL GCDAVVHSAALVATDPR+T+ ML+TNM GAQNVLGQ+VELG+DPIVHVSSFTA
Sbjct 64 AVREALQGCDAVVHSAALVATDPRQTAEMLATNMQGAQNVLGQSVELGLDPIVHVSSFTA 123
Query 126 LFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQF 185
LF P+L TL+A+LPV GG DGYG SKAQ+EIYARGLQDAGAPVNITYPGMVLGPPVGDQF
Sbjct 124 LFHPDLETLTAELPVVGGADGYGTSKAQVEIYARGLQDAGAPVNITYPGMVLGPPVGDQF 183
Query 186 GEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPEL 245
GEAGEGVR+AL MH IPGR AAWLIVDVRD+AALHAALLE GRGPRRYTAGGHR+P +L
Sbjct 184 GEAGEGVRAALQMHAIPGRSAAWLIVDVRDLAALHAALLEPGRGPRRYTAGGHRVPASDL 243
Query 246 AKILG 250
A +LG
Sbjct 244 AALLG 248
>gi|41406432|ref|NP_959268.1| hypothetical protein MAP0334 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394781|gb|AAS02651.1| hypothetical protein MAP_0334 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=330
Score = 410 bits (1055), Expect = 1e-112, Method: Compositional matrix adjust.
Identities = 207/245 (85%), Positives = 227/245 (93%), Gaps = 0/245 (0%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRD 65
MRVL+TGGTGFVGGWTAKAI+DAGHS+RFLVRNP +L TSVAKLGVDVSDFAVADI+DR
Sbjct 4 MRVLITGGTGFVGGWTAKAISDAGHSIRFLVRNPGKLHTSVAKLGVDVSDFAVADITDRV 63
Query 66 SVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTA 125
+VREAL GCDAVVHSAALVATDPR+T+ ML+TNM GAQNVLGQ+VELG+DPIVHVSSFTA
Sbjct 64 AVREALQGCDAVVHSAALVATDPRQTAEMLATNMQGAQNVLGQSVELGLDPIVHVSSFTA 123
Query 126 LFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQF 185
LF P+L TL+A+LPV GG DGYG SKAQ+EIYARGLQDAGAPVNITYPGMVLGPPVGDQF
Sbjct 124 LFHPDLETLTAELPVVGGADGYGTSKAQVEIYARGLQDAGAPVNITYPGMVLGPPVGDQF 183
Query 186 GEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPEL 245
GEAGEGVR+AL MH IPGR AAWLIVDVRD+AALHAALLE GRGPRRYTAGGHR+P +L
Sbjct 184 GEAGEGVRAALQMHAIPGRSAAWLIVDVRDLAALHAALLEPGRGPRRYTAGGHRVPASDL 243
Query 246 AKILG 250
A +LG
Sbjct 244 AALLG 248
>gi|336460796|gb|EGO39682.1| nucleoside-diphosphate-sugar epimerase [Mycobacterium avium subsp.
paratuberculosis S397]
Length=327
Score = 410 bits (1054), Expect = 1e-112, Method: Compositional matrix adjust.
Identities = 207/245 (85%), Positives = 227/245 (93%), Gaps = 0/245 (0%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRD 65
MRVL+TGGTGFVGGWTAKAI+DAGHS+RFLVRNP +L TSVAKLGVDVSDFAVADI+DR
Sbjct 1 MRVLITGGTGFVGGWTAKAISDAGHSIRFLVRNPGKLHTSVAKLGVDVSDFAVADITDRV 60
Query 66 SVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTA 125
+VREAL GCDAVVHSAALVATDPR+T+ ML+TNM GAQNVLGQ+VELG+DPIVHVSSFTA
Sbjct 61 AVREALQGCDAVVHSAALVATDPRQTAEMLATNMQGAQNVLGQSVELGLDPIVHVSSFTA 120
Query 126 LFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQF 185
LF P+L TL+A+LPV GG DGYG SKAQ+EIYARGLQDAGAPVNITYPGMVLGPPVGDQF
Sbjct 121 LFHPDLETLTAELPVVGGADGYGTSKAQVEIYARGLQDAGAPVNITYPGMVLGPPVGDQF 180
Query 186 GEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPEL 245
GEAGEGVR+AL MH IPGR AAWLIVDVRD+AALHAALLE GRGPRRYTAGGHR+P +L
Sbjct 181 GEAGEGVRAALQMHAIPGRSAAWLIVDVRDLAALHAALLEPGRGPRRYTAGGHRVPASDL 240
Query 246 AKILG 250
A +LG
Sbjct 241 AALLG 245
>gi|254818495|ref|ZP_05223496.1| hypothetical protein MintA_01154 [Mycobacterium intracellulare
ATCC 13950]
Length=328
Score = 409 bits (1051), Expect = 3e-112, Method: Compositional matrix adjust.
Identities = 205/245 (84%), Positives = 228/245 (94%), Gaps = 0/245 (0%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRD 65
MRVL+TGGTGFVGGWTAKA+ DAGHSVRFLVRNPA+L+T+VAKLGVD SDFAVADI+DR
Sbjct 1 MRVLITGGTGFVGGWTAKAVFDAGHSVRFLVRNPAKLQTTVAKLGVDTSDFAVADITDRV 60
Query 66 SVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTA 125
+VR+AL GCDAVVHSAALVATDPR+T +ML+TNM GAQNVLGQ+VELG+DPIVHVSSFTA
Sbjct 61 AVRDALQGCDAVVHSAALVATDPRQTPQMLATNMQGAQNVLGQSVELGLDPIVHVSSFTA 120
Query 126 LFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQF 185
LFRP+L TL+ADLPV GG DGYG SKAQ+EIYARGLQDAGAPV+ITYPGMVLGPPVGDQF
Sbjct 121 LFRPDLETLTADLPVVGGADGYGTSKAQVEIYARGLQDAGAPVSITYPGMVLGPPVGDQF 180
Query 186 GEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPEL 245
GEAGEGVR+A+ MH IPGR AAWLIVDVRD+AALHAALLE GRGPRRYTAGGHR+P +L
Sbjct 181 GEAGEGVRAAVQMHAIPGRSAAWLIVDVRDLAALHAALLEPGRGPRRYTAGGHRVPAADL 240
Query 246 AKILG 250
A +LG
Sbjct 241 ANLLG 245
>gi|240171047|ref|ZP_04749706.1| oxidoreductase [Mycobacterium kansasii ATCC 12478]
Length=325
Score = 407 bits (1045), Expect = 2e-111, Method: Compositional matrix adjust.
Identities = 214/266 (81%), Positives = 234/266 (88%), Gaps = 4/266 (1%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRD 65
M VLVTGGTGFVGGWTAKAIADAGHSVRFL RNPA+L+T+VAKLGVDVSDF VADI DRD
Sbjct 1 MHVLVTGGTGFVGGWTAKAIADAGHSVRFLARNPAKLQTTVAKLGVDVSDFVVADIKDRD 60
Query 66 SVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTA 125
SVREAL GCDAVVHSAALVATDPR+T +MLSTNM GA+NVLGQAV+LG+DPIVHVSSFTA
Sbjct 61 SVREALTGCDAVVHSAALVATDPRQTPQMLSTNMEGARNVLGQAVQLGLDPIVHVSSFTA 120
Query 126 LFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQF 185
LF P+L TL+ADLPV GGTDGYG SKAQ+EIYARGLQDAGAPVNITYPGMVLGPPVGDQF
Sbjct 121 LFHPDLETLTADLPVVGGTDGYGTSKAQVEIYARGLQDAGAPVNITYPGMVLGPPVGDQF 180
Query 186 GEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPEL 245
GEAGEGV++AL MH IPGR AAWL++DVRDVAA+HAALLE GRGPRRY GGHRIPV EL
Sbjct 181 GEAGEGVKAALQMHTIPGRRAAWLVIDVRDVAAVHAALLEPGRGPRRYMVGGHRIPVAEL 240
Query 246 AKILGG-SPAPRCWPSRCPIPRCVSR 270
A++LG + P P+P V R
Sbjct 241 AEMLGQVAETPMV---SVPVPDTVLR 263
>gi|342859943|ref|ZP_08716595.1| hypothetical protein MCOL_13725 [Mycobacterium colombiense CECT
3035]
gi|342132321|gb|EGT85550.1| hypothetical protein MCOL_13725 [Mycobacterium colombiense CECT
3035]
Length=328
Score = 405 bits (1041), Expect = 5e-111, Method: Compositional matrix adjust.
Identities = 205/245 (84%), Positives = 226/245 (93%), Gaps = 0/245 (0%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRD 65
MRVL+TGGTGFVGGWTAKAI DAGHSVRFLVRNP +L+T+VAKLGVDVSDFAVADI+DR
Sbjct 1 MRVLITGGTGFVGGWTAKAICDAGHSVRFLVRNPGKLQTTVAKLGVDVSDFAVADITDRV 60
Query 66 SVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTA 125
+VR+AL GCDAVVHSAALVATDPR+T ML+TNM GAQNVLGQ+VELG+DPIVHVSSFTA
Sbjct 61 AVRDALQGCDAVVHSAALVATDPRQTPEMLATNMQGAQNVLGQSVELGLDPIVHVSSFTA 120
Query 126 LFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQF 185
LF P+L TL+ADLPV GG DGYG SKAQ+EIYARGLQDAGAPVNI+YPGMVLGPPVGDQF
Sbjct 121 LFHPDLETLTADLPVVGGADGYGTSKAQVEIYARGLQDAGAPVNISYPGMVLGPPVGDQF 180
Query 186 GEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPEL 245
GEAGEGVR+A+ MH IPGR AAWLIVDVRD+AALHAALLE GRGPRRYTAGGHR+P +L
Sbjct 181 GEAGEGVRAAVQMHAIPGRSAAWLIVDVRDLAALHAALLEPGRGPRRYTAGGHRVPAADL 240
Query 246 AKILG 250
A +LG
Sbjct 241 ATLLG 245
>gi|296166834|ref|ZP_06849251.1| probable oxidoreductase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897711|gb|EFG77300.1| probable oxidoreductase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=327
Score = 403 bits (1035), Expect = 2e-110, Method: Compositional matrix adjust.
Identities = 203/245 (83%), Positives = 225/245 (92%), Gaps = 0/245 (0%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRD 65
MRVL+TGGTGFVGGWTAKAIADAGHS+RFLVRNP +LKTSVA+LGVDVSDFAVADI+DR
Sbjct 1 MRVLITGGTGFVGGWTAKAIADAGHSIRFLVRNPGKLKTSVAQLGVDVSDFAVADITDRM 60
Query 66 SVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTA 125
+VR AL+GC+AVVHSAALVATDPR+ ++ML+TNM GAQNVLGQ+VELG+DPIVHVSSF+A
Sbjct 61 AVRAALDGCEAVVHSAALVATDPRQKTQMLTTNMQGAQNVLGQSVELGLDPIVHVSSFSA 120
Query 126 LFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQF 185
LF L LSADLPV GG DGYG SKAQ+EIYARGLQDAGAPVNITYPGMV+GPPVGDQF
Sbjct 121 LFHAGLEQLSADLPVVGGADGYGTSKAQVEIYARGLQDAGAPVNITYPGMVIGPPVGDQF 180
Query 186 GEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPEL 245
GEAGEGV++AL MHVIPGR AWLIVDVRD+AALHAALLE GRGPRRY AGGHR+P EL
Sbjct 181 GEAGEGVKAALQMHVIPGRSGAWLIVDVRDLAALHAALLEPGRGPRRYMAGGHRVPAAEL 240
Query 246 AKILG 250
AK+LG
Sbjct 241 AKMLG 245
>gi|118619476|ref|YP_907808.1| oxidoreductase [Mycobacterium ulcerans Agy99]
gi|183985221|ref|YP_001853512.1| oxidoreductase [Mycobacterium marinum M]
gi|118571586|gb|ABL06337.1| oxidoreductase [Mycobacterium ulcerans Agy99]
gi|183178547|gb|ACC43657.1| oxidoreductase [Mycobacterium marinum M]
Length=330
Score = 398 bits (1023), Expect = 5e-109, Method: Compositional matrix adjust.
Identities = 208/250 (84%), Positives = 224/250 (90%), Gaps = 0/250 (0%)
Query 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
M N M VLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPA+L++SVAKLGVDVSDF + D
Sbjct 1 MHNRCMHVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPAKLESSVAKLGVDVSDFIIGD 60
Query 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
I DRD VREAL GCDAVVHSAALVATD R+T MLSTNM GA+NVLGQAV LG+DPIVHV
Sbjct 61 IKDRDLVREALTGCDAVVHSAALVATDQRQTQDMLSTNMEGARNVLGQAVALGLDPIVHV 120
Query 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP 180
SSFTALF P L TLSADLPV GG+DGYG SKAQ+EIYARGLQDAGAPVNITYPGMVLGPP
Sbjct 121 SSFTALFHPGLQTLSADLPVVGGSDGYGTSKAQVEIYARGLQDAGAPVNITYPGMVLGPP 180
Query 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
VG+QFGEAGEGV++AL + IPGR AAWLI+DVRDVAA+HAALLE GRGPRRY GGHRI
Sbjct 181 VGNQFGEAGEGVKAALEIRTIPGRNAAWLIIDVRDVAAVHAALLEPGRGPRRYMVGGHRI 240
Query 241 PVPELAKILG 250
PVPELAK+LG
Sbjct 241 PVPELAKMLG 250
>gi|333990640|ref|YP_004523254.1| oxidoreductase [Mycobacterium sp. JDM601]
gi|333486608|gb|AEF36000.1| oxidoreductase [Mycobacterium sp. JDM601]
Length=325
Score = 369 bits (947), Expect = 3e-100, Method: Compositional matrix adjust.
Identities = 194/251 (78%), Positives = 218/251 (87%), Gaps = 3/251 (1%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRD 65
MRVL+TGGTGFVGGWTAKAIADAGH RFLVRNPA L +SVA+LGVDVSD+ V DI+D D
Sbjct 1 MRVLITGGTGFVGGWTAKAIADAGHRPRFLVRNPAGLHSSVARLGVDVSDYVVGDITDAD 60
Query 66 SVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTA 125
SVREAL GCDAVVH+AA+VATDPR+T++ML TN AGA NVLG AV LG+DPI+HVSSFTA
Sbjct 61 SVREALRGCDAVVHAAAVVATDPRQTAQMLRTNSAGAHNVLGGAVALGLDPIIHVSSFTA 120
Query 126 LFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQF 185
LF P L TL ADLPVAGG DGYG+SKA+ ++YARGLQDAGAPVNITYPGMVLGPPVGD+
Sbjct 121 LFHPGLKTLRADLPVAGGADGYGRSKAREDLYARGLQDAGAPVNITYPGMVLGPPVGDRL 180
Query 186 GEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPEL 245
GEAGEGVR+AL MHVIPGRGAAWL++DVRD+AA+H ALLE GRGPRRY AGG R+P L
Sbjct 181 GEAGEGVRAALEMHVIPGRGAAWLVIDVRDLAAMHVALLEPGRGPRRYMAGGRRVPPGRL 240
Query 246 AKILG---GSP 253
A +L GSP
Sbjct 241 ASLLAEVSGSP 251
>gi|108797852|ref|YP_638049.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. MCS]
gi|119866946|ref|YP_936898.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. KMS]
gi|108768271|gb|ABG06993.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. MCS]
gi|119693035|gb|ABL90108.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. KMS]
Length=329
Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 175/265 (67%), Positives = 201/265 (76%), Gaps = 2/265 (0%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRD 65
MRVLVTGGTGFVG WTAKA+ DAGH VRFLVR P RL TS AK+G D D V DISD D
Sbjct 1 MRVLVTGGTGFVGAWTAKAVQDAGHQVRFLVRKPERLTTSAAKIGADTGDHVVGDISDPD 60
Query 66 SVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTA 125
S AL+GCDAV+H AA+V+TDP ML TN+ GA+ VLG A + G+DPI+HVSSFTA
Sbjct 61 STAAALDGCDAVIHCAAMVSTDPSMADEMLRTNLEGARYVLGGAAKAGLDPIIHVSSFTA 120
Query 126 LFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQF 185
LFRP L L ADLPV GG+DGYG+SKA +E YARGLQDAGAPV+ITYPGMVLGPP GDQF
Sbjct 121 LFRPGLDVLHADLPVTGGSDGYGKSKAVVEAYARGLQDAGAPVDITYPGMVLGPPAGDQF 180
Query 186 GEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPEL 245
GEA EGV +++ M +PGRGA W++VDVRD+AALH ALLE GRGPRRY GG R+PV EL
Sbjct 181 GEAAEGVEASIKMRSVPGRGAGWIVVDVRDLAALHVALLEPGRGPRRYMLGGRRVPVGEL 240
Query 246 AKILGGSPAPRCWPSRCPIPRCVSR 270
A ++G + P PIP R
Sbjct 241 ATLIGDAAGRDLAP--IPIPDVALR 263
>gi|126433492|ref|YP_001069183.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. JLS]
gi|126233292|gb|ABN96692.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. JLS]
Length=329
Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 175/265 (67%), Positives = 201/265 (76%), Gaps = 2/265 (0%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRD 65
MRVLVTGGTGFVG WTAKA+ DAGH VRFLVR P RL TS AK+G D D V DISD D
Sbjct 1 MRVLVTGGTGFVGAWTAKAVQDAGHQVRFLVRKPERLTTSAAKIGADTGDHVVGDISDPD 60
Query 66 SVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTA 125
S AL+GCDAV+H AA+V+TDP ML TN+ GA+ VLG A + G+DPI+HVSSFTA
Sbjct 61 STAAALDGCDAVIHCAAMVSTDPSMADEMLRTNLEGARYVLGGAAKAGLDPIIHVSSFTA 120
Query 126 LFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQF 185
LFRP L L ADLPV GG+DGYG+SKA +E YARGLQDAGAPV+ITYPGMVLGPP GDQF
Sbjct 121 LFRPGLDVLHADLPVTGGSDGYGKSKAVVEAYARGLQDAGAPVDITYPGMVLGPPAGDQF 180
Query 186 GEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPEL 245
GEA EGV +++ M +PGRGA W++VDVRD+AALH ALLE GRGPRRY GG R+PV EL
Sbjct 181 GEAAEGVEASIKMRSVPGRGAGWIVVDVRDLAALHVALLEPGRGPRRYMLGGRRVPVGEL 240
Query 246 AKILGGSPAPRCWPSRCPIPRCVSR 270
A ++G + P PIP R
Sbjct 241 ATLIGDAAGRDLAP--IPIPDVALR 263
>gi|315444067|ref|YP_004076946.1| nucleoside-diphosphate-sugar epimerase [Mycobacterium sp. Spyr1]
gi|315262370|gb|ADT99111.1| nucleoside-diphosphate-sugar epimerase [Mycobacterium sp. Spyr1]
Length=329
Score = 346 bits (887), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 164/245 (67%), Positives = 197/245 (81%), Gaps = 0/245 (0%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRD 65
M+VL+TGGTGFVG WTAKA DAGH VRFLVRNP RL TS A++G D+SD + DI+D +
Sbjct 1 MKVLITGGTGFVGAWTAKAAQDAGHQVRFLVRNPDRLTTSAAEIGADISDHVIGDIADGE 60
Query 66 SVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTA 125
+ AL+GCDAV+H AA+V+TDP ML TN+ GA+N+LG AV G+DPIVHVSSFTA
Sbjct 61 ATAAALDGCDAVIHCAAMVSTDPSRADEMLHTNLEGARNILGGAVHAGIDPIVHVSSFTA 120
Query 126 LFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQF 185
LFRP+L L ADLPV GG+DGYG+SKA +E YARGLQD GAPVNITYPGMVLGPP GDQF
Sbjct 121 LFRPDLDRLHADLPVVGGSDGYGRSKAAVEAYARGLQDGGAPVNITYPGMVLGPPAGDQF 180
Query 186 GEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPEL 245
GEA +GV +++ M +PGRGA W+++DVRD+A LH ALLE GRGPRRY AGG R+ V EL
Sbjct 181 GEAADGVEASVKMRGVPGRGAGWIVIDVRDLADLHVALLEPGRGPRRYMAGGQRVSVSEL 240
Query 246 AKILG 250
A ++G
Sbjct 241 ASMIG 245
>gi|145223741|ref|YP_001134419.1| NAD-dependent epimerase/dehydratase [Mycobacterium gilvum PYR-GCK]
gi|145216227|gb|ABP45631.1| NAD-dependent epimerase/dehydratase [Mycobacterium gilvum PYR-GCK]
Length=347
Score = 345 bits (884), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 163/250 (66%), Positives = 197/250 (79%), Gaps = 0/250 (0%)
Query 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVAD 60
+ M+VL+TGGTGFVG WTAKA DAGH VRFLVRNP RL TS A++G D+SD + D
Sbjct 14 IDGGQMKVLITGGTGFVGAWTAKAAQDAGHQVRFLVRNPDRLTTSAAEIGADISDHVIGD 73
Query 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
I+D ++ AL+GCDAV+H AA+V+TDP ML TN+ GA+N+LG A G+DPIVHV
Sbjct 74 IADGEATAAALDGCDAVIHCAAMVSTDPSRADEMLHTNLEGARNILGGAAHAGIDPIVHV 133
Query 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP 180
SSFTALFRP+L L ADLPV GG+DGYG+SKA +E YARGLQD GAPVNITYPGMVLGPP
Sbjct 134 SSFTALFRPDLDRLHADLPVVGGSDGYGRSKAAVEAYARGLQDGGAPVNITYPGMVLGPP 193
Query 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
GDQFGEA +GV +++ M +PGRGA W+++DVRD+A LH ALLE GRGPRRY AGG R+
Sbjct 194 AGDQFGEAADGVEASVKMRGVPGRGAGWIVIDVRDLADLHVALLEPGRGPRRYMAGGQRV 253
Query 241 PVPELAKILG 250
V ELA ++G
Sbjct 254 SVSELASMIG 263
>gi|169630054|ref|YP_001703703.1| putative oxidoreductase [Mycobacterium abscessus ATCC 19977]
gi|169242021|emb|CAM63049.1| Putative oxidoreductase [Mycobacterium abscessus]
Length=340
Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/244 (74%), Positives = 204/244 (84%), Gaps = 0/244 (0%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRD 65
MRVLVTGGTGFVGGWTAKA+A+AGH VRFLVR ARL T+VA LGVDVSD+AV DI+DR
Sbjct 1 MRVLVTGGTGFVGGWTAKAMAEAGHKVRFLVRKEARLHTTVATLGVDVSDYAVGDITDRA 60
Query 66 SVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTA 125
SV AL+GCDAVVHSAA+V+TDP E RM++ N+ G +NVLG AV+ G+DPIVHVSS TA
Sbjct 61 SVEAALDGCDAVVHSAAMVSTDPAEADRMMAINLEGTRNVLGAAVDRGLDPIVHVSSITA 120
Query 126 LFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQF 185
LFRP L T +ADLP AGG+DGYGQSKA++E+Y R LQD+GAPV ITYPGMVLGPPVGDQF
Sbjct 121 LFRPGLETFAADLPAAGGSDGYGQSKARVELYVRALQDSGAPVTITYPGMVLGPPVGDQF 180
Query 186 GEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPEL 245
GEA EGVR L +PGR AAWL+VDVRD+AALH ALLE RGPRRYTAGGHR+ V EL
Sbjct 181 GEAAEGVRWVLLTRSVPGRSAAWLVVDVRDLAALHTALLEPSRGPRRYTAGGHRLEVGEL 240
Query 246 AKIL 249
+L
Sbjct 241 VDLL 244
>gi|120404349|ref|YP_954178.1| NAD-dependent epimerase/dehydratase [Mycobacterium vanbaalenii
PYR-1]
gi|119957167|gb|ABM14172.1| NAD-dependent epimerase/dehydratase [Mycobacterium vanbaalenii
PYR-1]
Length=329
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/245 (69%), Positives = 197/245 (81%), Gaps = 0/245 (0%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRD 65
M+VLVTGGTGFVG WTAKA AGH VRFLVRNP RL TS K+GVD+SD AV DI+D
Sbjct 1 MKVLVTGGTGFVGAWTAKAAQQAGHQVRFLVRNPDRLTTSAEKIGVDISDHAVGDIADAA 60
Query 66 SVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTA 125
+ AL+GCDAV+H AA+V+TDP ML TN+ GA+NVLG+A +G+DPIVHVSSFTA
Sbjct 61 ATAAALDGCDAVIHCAAMVSTDPSRADEMLHTNLEGARNVLGEAARVGIDPIVHVSSFTA 120
Query 126 LFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQF 185
LFRP+L L ADLPV GG+DGYG+SKA +E YARGLQD GAPVNITYPGMVLGPP GDQF
Sbjct 121 LFRPDLDVLHADLPVVGGSDGYGRSKAVVEAYARGLQDGGAPVNITYPGMVLGPPAGDQF 180
Query 186 GEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPEL 245
GEA EGV +++ M +PGR AAW+++DVRD+A LH ALLE GRGPRRY AGG R+PV L
Sbjct 181 GEAAEGVEASVKMRGVPGRSAAWIVIDVRDLADLHVALLEPGRGPRRYMAGGQRVPVDML 240
Query 246 AKILG 250
A ++G
Sbjct 241 ASMIG 245
>gi|111022856|ref|YP_705828.1| oxidoreductase [Rhodococcus jostii RHA1]
gi|110822386|gb|ABG97670.1| possible oxidoreductase [Rhodococcus jostii RHA1]
Length=329
Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/265 (62%), Positives = 196/265 (74%), Gaps = 2/265 (0%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRD 65
M VLVTGGTGFVG W+AKA DAGH VRFLVR+PARL TS A LG+D SD V DI+D +
Sbjct 1 MLVLVTGGTGFVGAWSAKAAVDAGHRVRFLVRDPARLVTSAAALGLDTSDHVVGDITDAE 60
Query 66 SVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTA 125
SVR AL+GCDAVVH+AA+VA DPR ML TN+AGAQNVLG AVELG+DPIV+VSS A
Sbjct 61 SVRRALDGCDAVVHAAAVVAVDPRRAEEMLQTNLAGAQNVLGTAVELGLDPIVYVSSIAA 120
Query 126 LFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQF 185
LF+P L+ DLPV G D YG+SKA++E YAR LQ GAP+ ITYPGM++GPP G QF
Sbjct 121 LFQPGARLLTPDLPVCGPPDAYGRSKARVEQYARDLQADGAPIAITYPGMIIGPPAGTQF 180
Query 186 GEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPEL 245
GEA + V +A+ + +PGRGAAW +VDVR+VA+ HAALLE GRG RRY GG RIP+ +
Sbjct 181 GEAAQAVEAAVHLRGLPGRGAAWTMVDVREVASAHAALLEQGRGARRYMLGGPRIPIAGI 240
Query 246 AKILGGSPAPRCWPSRCPIPRCVSR 270
A++LG W P+P R
Sbjct 241 AEMLGVITGK--WMGVFPVPDAALR 263
>gi|226365364|ref|YP_002783147.1| NAD-dependent epimerase/dehydratase family protein [Rhodococcus
opacus B4]
gi|226243854|dbj|BAH54202.1| NAD-dependent epimerase/dehydratase family protein [Rhodococcus
opacus B4]
Length=329
Score = 282 bits (721), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 155/244 (64%), Positives = 187/244 (77%), Gaps = 0/244 (0%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRD 65
M VLVTGGTGFVG W+AKA DAGH VRFLVR+PARL TS A LG+D SD V DI+D
Sbjct 1 MLVLVTGGTGFVGAWSAKAAVDAGHRVRFLVRDPARLVTSAAALGLDTSDHVVGDITDAA 60
Query 66 SVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTA 125
SVR AL+GCDAV+H+AA+VA DPR ML TN+AGAQNVLG AVELG+DPIV+VSS A
Sbjct 61 SVRRALDGCDAVIHAAAVVAVDPRRAEEMLQTNLAGAQNVLGTAVELGLDPIVYVSSIAA 120
Query 126 LFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQF 185
LF+P L+ DLPV G +D YG+SKA++E YAR LQ GAP+ ITYPGM++GPP G+QF
Sbjct 121 LFQPGARLLTPDLPVCGPSDAYGRSKARVEQYARDLQADGAPIAITYPGMIVGPPAGNQF 180
Query 186 GEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPEL 245
GEA + V +A+ + +PGRGAAW +VDVR+VA HAALL G G RR+ GG RIP+ +
Sbjct 181 GEAAQAVEAAVHLRGLPGRGAAWTMVDVREVATAHAALLRQGSGARRFMLGGPRIPIAGI 240
Query 246 AKIL 249
A +L
Sbjct 241 AGML 244
>gi|54024384|ref|YP_118626.1| putative dehydrogenase [Nocardia farcinica IFM 10152]
gi|54015892|dbj|BAD57262.1| putative dehydrogenase [Nocardia farcinica IFM 10152]
Length=342
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/245 (44%), Positives = 139/245 (57%), Gaps = 4/245 (1%)
Query 8 VLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKL---GVDVSDFAVADISDR 64
+ VTGGTG++G T A+ GH VR LV +PA T V L G D DI DR
Sbjct 14 IAVTGGTGYLGAHTVAALLADGHEVRLLV-HPAENPTEVTALFGVGADRLTTVAGDIRDR 72
Query 65 DSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFT 124
V L+GCDA++H+A +V TD R + M N+ +L +A G+DPIVHV+S++
Sbjct 73 AVVATLLDGCDALLHAAGVVGTDSRREALMWEVNVEATGRILAEATARGLDPIVHVASYS 132
Query 125 ALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQ 184
ALF ++ D P A G YG++K+ + AR LQ AGAP+ ITYP V+GP +G Q
Sbjct 133 ALFPCPDPVITPDSPTAAGRSAYGRTKSTADRIARALQAAGAPLVITYPSSVVGPALGPQ 192
Query 185 FGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPE 244
G EG L P +VDVRDVAA+HAAL+ GRGPRRY GGH + E
Sbjct 193 AGITAEGWAVMLRSGWAPSVRGGMQMVDVRDVAAVHAALMRPGRGPRRYLCGGHLLTFDE 252
Query 245 LAKIL 249
+ +L
Sbjct 253 IVDLL 257
>gi|145595227|ref|YP_001159524.1| NAD-dependent epimerase/dehydratase [Salinispora tropica CNB-440]
gi|145304564|gb|ABP55146.1| NAD-dependent epimerase/dehydratase [Salinispora tropica CNB-440]
Length=354
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/249 (44%), Positives = 150/249 (61%), Gaps = 9/249 (3%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVS--DFAVADISD 63
M VLVTGGTGFVG + A+ AGH VR LVR+PAR+ ++ LG++ + D D++D
Sbjct 1 MTVLVTGGTGFVGAHSVVALLTAGHRVRLLVRDPARVPATLRPLGIESASIDVVAGDVTD 60
Query 64 RDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSF 123
D+V A++GC +V+H+A++ + D R+ RM + N+ G + VLG AV G+DP+V VSSF
Sbjct 61 PDTVAAAVHGCTSVLHAASVYSFDTRDHPRMRAVNVRGTEVVLGAAVTAGLDPVVQVSSF 120
Query 124 TALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGD 183
AL ++ D V + Y SKAQ + AR Q GAPV +TYP LGP D
Sbjct 121 GALLPARQTPVTPDAEVGTPRETYLDSKAQADRVARRYQAEGAPVVVTYPLAALGP--HD 178
Query 184 QF-GEAGEGVRSAL--WMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
+ G+ +R+AL M + P G + + DVRDVA LHAA+LE GRGPRRY G +
Sbjct 179 AYLGDQTTRLRNALRGLMPIWPRGG--FPVGDVRDVARLHAAVLEPGRGPRRYLGPGRYV 236
Query 241 PVPELAKIL 249
E ++L
Sbjct 237 DTQEYLRVL 245
>gi|254483004|ref|ZP_05096239.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[marine gamma proteobacterium HTCC2148]
gi|214036689|gb|EEB77361.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[marine gamma proteobacterium HTCC2148]
Length=335
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 105/246 (43%), Positives = 138/246 (57%), Gaps = 8/246 (3%)
Query 9 LVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRDSVR 68
+VTGGTGF+G T A+ DAG V LVR+ +++ GV + V DI D SVR
Sbjct 1 MVTGGTGFIGYHTVMALLDAGLEVSLLVRSIDKMERMYGP-GV-IQHHTVGDIGDAASVR 58
Query 69 EALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTALFR 128
+AL GCD VVH AALV+T + R+ TN+ GA NVLG+A E+GM I+HVSS TA++
Sbjct 59 QALEGCDGVVHVAALVSTHAADAERVYRTNLQGAHNVLGEAAEMGMQTIIHVSSVTAIYD 118
Query 129 PNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQFGEA 188
P + L+ D P GYG+SK E YAR LQ G PV ITYP V+GP + EA
Sbjct 119 PAASVLNEDSPPGPSPRGYGRSKVACEEYARSLQAQGHPVFITYPASVMGPD-APEMTEA 177
Query 189 GEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPV----PE 244
G+++ L +P + VD RD+A H +L+ RY GGH + PE
Sbjct 178 HIGLQTYL-SKFVPLMSSGNQYVDARDIARAHLHILQYEVPSNRYVLGGHYLSWKKLGPE 236
Query 245 LAKILG 250
L + G
Sbjct 237 LEALTG 242
>gi|271970061|ref|YP_003344257.1| NAD-dependent epimerase/dehydratase [Streptosporangium roseum
DSM 43021]
gi|270513236|gb|ACZ91514.1| NAD-dependent epimerase/dehydratase [Streptosporangium roseum
DSM 43021]
Length=341
Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 108/264 (41%), Positives = 145/264 (55%), Gaps = 14/264 (5%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVD-VSDFAVADISDR 64
MRVLVTG +GFVG A+ AGH LVR+P + + +A +GVD ADI D
Sbjct 1 MRVLVTGASGFVGSHAVAALVAAGHEPLLLVRDPEKTRKVLADVGVDGAVPMHEADIRDA 60
Query 65 DSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFT 124
+SVR AL C+AV+H+AA + + TN+AG +NVLGQA LG+DPIVH+S+
Sbjct 61 ESVRNALERCEAVIHAAAEIGV-VSHAGDLAGTNVAGLKNVLGQAAALGLDPIVHISTVA 119
Query 125 ALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGP--PVG 182
P ++ + P++ + YG++K E YAR LQ+ G PV + YPG V GP P
Sbjct 120 VFVPPAGPLITVESPLSAPRNAYGRTKVSGERYARRLQERGEPVTVVYPGGVAGPYQPSL 179
Query 183 DQFGEAGEGVRSAL---WMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHR 239
D EG+R+ L W P ++DVRD+A + A LE GRGPRR+ GGH
Sbjct 180 DAL---MEGLRAGLEQGW----PITAGGVCVLDVRDLAIVLARCLEPGRGPRRFMLGGHY 232
Query 240 IPVPELAKILGGSPAPRCWPSRCP 263
+ ELA + RC R P
Sbjct 233 LTWAELADACDEATGGRCRRFRVP 256
>gi|315442594|ref|YP_004075473.1| nucleoside-diphosphate-sugar epimerase [Mycobacterium sp. Spyr1]
gi|315260897|gb|ADT97638.1| nucleoside-diphosphate-sugar epimerase [Mycobacterium sp. Spyr1]
Length=338
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/254 (40%), Positives = 138/254 (55%), Gaps = 10/254 (3%)
Query 2 QNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKL-GVDVSDFAVAD 60
T+ + VTGG G++G T +A+ +AGHSVR LV + + +L + V D
Sbjct 1 MEGTIHIAVTGGIGYLGAHTVRALLEAGHSVRLLVLPQEQDAPVIGRLRALGEVSVVVGD 60
Query 61 ISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHV 120
I +V E L+G DAV+H+A +V TD R + M N + +L +AV+LG+DP+V V
Sbjct 61 IRSESTVTELLSGADAVLHAAGVVGTDERRSQLMWDINAYATEQILTRAVDLGLDPVVSV 120
Query 121 SSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP 180
SS++ALF P +SAD P A G Y ++K + AR LQDAGAPV +TYP V
Sbjct 121 SSYSALFPPKNGVISADSPTADGRSSYAKTKGYADRAARRLQDAGAPVVVTYPSSV---- 176
Query 181 VGDQFGEAGEGVRSALWMHVIPGR-----GAAWLIVDVRDVAALHAALLESGRGPRRYTA 235
VG FG GV W ++ R A ++DVRDVA +H L+ GRGP RY
Sbjct 177 VGAAFGGTASGVTERGWAPIVRARVAPRVRAGMQMIDVRDVADVHTRLMSPGRGPHRYVC 236
Query 236 GGHRIPVPELAKIL 249
GG + E+ L
Sbjct 237 GGVMLTFDEMIDAL 250
>gi|145222156|ref|YP_001132834.1| NAD-dependent epimerase/dehydratase [Mycobacterium gilvum PYR-GCK]
gi|145214642|gb|ABP44046.1| NAD-dependent epimerase/dehydratase [Mycobacterium gilvum PYR-GCK]
Length=338
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/256 (41%), Positives = 141/256 (56%), Gaps = 14/256 (5%)
Query 2 QNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLV---RNPARLKTSVAKLGVDVSDFAV 58
T+ + VTGG G++G T +A+ +AGHSVR LV A + + LG +VS V
Sbjct 1 MEGTIHIAVTGGIGYLGAHTVRALLEAGHSVRLLVLPQEQDAPVIDRLRALG-EVS-VVV 58
Query 59 ADISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIV 118
DI +V E L+G DAV+H+A +V TD R + M N + +L +AV+LG+DP+V
Sbjct 59 GDIRSESTVTELLSGADAVLHAAGVVGTDERRSQLMWDINAYATEQILTRAVDLGLDPVV 118
Query 119 HVSSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLG 178
VSS++ALF P +SAD P A G Y ++K + AR LQDAGAPV +TYP V
Sbjct 119 SVSSYSALFPPKNGVISADSPTADGRSSYAKTKGYADRAARRLQDAGAPVVVTYPSSV-- 176
Query 179 PPVGDQFGEAGEGVRSALWMHVIPGR-----GAAWLIVDVRDVAALHAALLESGRGPRRY 233
VG FG GV W ++ R A ++DVRDVA +H L+ GRGP RY
Sbjct 177 --VGAAFGGTASGVTERGWAPIVRARVAPRVRAGMQMIDVRDVADVHTRLMSPGRGPHRY 234
Query 234 TAGGHRIPVPELAKIL 249
GG + E+ L
Sbjct 235 VCGGVMLTFDEMIDAL 250
>gi|111020637|ref|YP_703609.1| UDP-glucose 4-epimerase [Rhodococcus jostii RHA1]
gi|110820167|gb|ABG95451.1| probable UDP-glucose 4-epimerase [Rhodococcus jostii RHA1]
Length=323
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/261 (43%), Positives = 145/261 (56%), Gaps = 4/261 (1%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVS--DFAVADISD 63
M++ VTGGTG+VG T A+ AGHSVR LV +A G D + + V DI D
Sbjct 1 MKIAVTGGTGYVGAHTTLALLAAGHSVRLLVLPAESPDAVLAAAGDDAARIEQVVGDIRD 60
Query 64 RDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSF 123
V L+GCDA++H+A +V TD R M N +L +A LG+DPI+HV+SF
Sbjct 61 AQVVARLLDGCDALLHAAGVVGTDDRREQLMWEINTQATAAILTRAAFLGLDPIIHVASF 120
Query 124 TALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGD 183
+ALF A + D P A G YG++KA + AR LQDAGAPV ITYP V+GP +G
Sbjct 121 SALFPSPDAVIGPDSPTASGRSAYGRTKAAADRIARALQDAGAPVVITYPTSVVGPGLGS 180
Query 184 QFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVP 243
G +G + + V P ++DVRDVAA+HAA + GRGPRRY GG +
Sbjct 181 TKGITEQGWGAIVSGGVAPRFDGGMQMIDVRDVAAVHAAAMHPGRGPRRYVCGGELVEFN 240
Query 244 ELAKILGGSPAPRCWPSRCPI 264
+L +L S R R P+
Sbjct 241 QLIDVLEHSSGRRL--RRIPL 259
>gi|118471455|ref|YP_890135.1| oxidoreductase [Mycobacterium smegmatis str. MC2 155]
gi|118172742|gb|ABK73638.1| oxidoreductase [Mycobacterium smegmatis str. MC2 155]
Length=329
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 133/250 (54%), Gaps = 1/250 (0%)
Query 1 MQNATMRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLG-VDVSDFAVA 59
M ++R+ VTGGTG+VG T + + AGH VR LV + + KL + V
Sbjct 1 MSEESVRIAVTGGTGYVGAHTVRGLLTAGHEVRLLVAPGCEGEPVIDKLAEAGEVETLVG 60
Query 60 DISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVH 119
DI D +V + GCD+V+H+A +V TD T M N + VL +A E G+DPIV
Sbjct 61 DIRDSGTVDRLIKGCDSVIHAAGVVGTDKSRTQLMWEINAHATEAVLIRAAEAGLDPIVS 120
Query 120 VSSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGP 179
VSS+++LF P +SAD P G Y Q+KA + AR LQD GAPV +TYP V+GP
Sbjct 121 VSSYSSLFPPPDGVISADTPPVAGRSPYAQTKAYADRAARRLQDTGAPVVVTYPSSVVGP 180
Query 180 PVGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHR 239
G G + V P ++DVRDVA +H AL++ GRGP RY GG
Sbjct 181 AWFTAPGVTERGWGPIVKARVAPRLRGGMQMIDVRDVADVHVALMKPGRGPHRYVCGGVL 240
Query 240 IPVPELAKIL 249
+ E IL
Sbjct 241 VSFNEWIDIL 250
>gi|296166229|ref|ZP_06848668.1| oxidoreductase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898413|gb|EFG77980.1| oxidoreductase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=334
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/249 (39%), Positives = 138/249 (56%), Gaps = 8/249 (3%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVR----NPARLKTSVAKLGVDVSDFAVADI 61
M++ VTGGTG++G + + +AGH VR L NP L+ + V D+
Sbjct 1 MQIAVTGGTGYLGAHVVRGLLNAGHQVRLLAEPGWDNPELLRGLSESGSITV---LTGDV 57
Query 62 SDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVS 121
+ D+V L+ CDAV+H+A++V TD R + M N ++VL QA + G+DPIV ++
Sbjct 58 RESDTVATLLDDCDAVLHAASVVGTDNRRENLMWDINAFATESVLRQAHDRGLDPIVTIN 117
Query 122 SFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPV 181
S+++LF P +A + D P A G Y ++K + AR LQD GAPV ITYP V+GP +
Sbjct 118 SYSSLFSPAVAVIGPDTPTASGRSAYARTKGYADRAARRLQDEGAPVVITYPSSVVGPAL 177
Query 182 GDQFGEAGEGVRSALWMHVIPG-RGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
G +G + V P R A ++VDVRDVA +H A + GRGP+RY GG +
Sbjct 178 ATAPGITEQGWAPIIRAGVAPRLRNAGMMMVDVRDVAEVHVASMRPGRGPKRYVCGGVML 237
Query 241 PVPELAKIL 249
E+ L
Sbjct 238 SFDEMIGAL 246
>gi|226362880|ref|YP_002780660.1| NAD-dependent epimerase/dehydratase family protein [Rhodococcus
opacus B4]
gi|226241367|dbj|BAH51715.1| NAD-dependent epimerase/dehydratase family protein [Rhodococcus
opacus B4]
Length=323
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/254 (42%), Positives = 141/254 (56%), Gaps = 4/254 (1%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLV---RNPARLKTSVAKLGVDVSDFAVADIS 62
M++ VTGGTG+VG T A+ GH+VR L+ P L + + V DI
Sbjct 1 MKIAVTGGTGYVGAHTTLALLADGHTVRLLILPTECPGALLAAAGADAARIEQV-VGDIR 59
Query 63 DRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSS 122
D ++V L+GCDA++H+A +V TD R M N ++L +A LG+DPIVHV+S
Sbjct 60 DAETVGRVLDGCDALLHAAGVVGTDDRREQLMWEINTQATASILTRAAYLGLDPIVHVAS 119
Query 123 FTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVG 182
F+ALF A + D P A G YG++KA + AR LQDAGAPV ITYP V+ P VG
Sbjct 120 FSALFPSPDAVIGPDSPTASGRSAYGRTKAAADRIARALQDAGAPVVITYPASVVDPGVG 179
Query 183 DQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPV 242
G +G + + V P ++DVRDVAA+HAA + GRGPRRY GG +
Sbjct 180 TTKGVTEQGWGAIVGGGVAPRFDGGVQMIDVRDVAAVHAAAMHPGRGPRRYVCGGELVEF 239
Query 243 PELAKILGGSPAPR 256
+L +L S R
Sbjct 240 NQLVDVLEHSSGRR 253
>gi|269128593|ref|YP_003301963.1| NAD-dependent epimerase/dehydratase [Thermomonospora curvata
DSM 43183]
gi|268313551|gb|ACY99925.1| NAD-dependent epimerase/dehydratase [Thermomonospora curvata
DSM 43183]
Length=337
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/257 (43%), Positives = 147/257 (58%), Gaps = 13/257 (5%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLG-VDVSDFAVADISDR 64
M+VLVTG +GFVG T KA+ +AGH VR R+ R++ ++ G D + D++ R
Sbjct 1 MKVLVTGASGFVGSHTVKALVEAGHQVRAAARSAHRIRRALRPHGCADAVETVEVDLTSR 60
Query 65 DSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFT 124
+ V AL GCDAVVH+AA+ + D R + + N+ VLG A LG++PIVHVSSFT
Sbjct 61 EPVVRALTGCDAVVHTAAVHSFDARRRPELHAINVRSTDLVLGSAYGLGLNPIVHVSSFT 120
Query 125 ALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQ 184
AL P +L+A PV G+SKA E AR Q AGAPV I PGMV GP
Sbjct 121 ALL-PAAQSLTASSPVGDPPVPCGRSKALAEWIARRWQLAGAPVTIVTPGMVWGPH-DPA 178
Query 185 FGEAGEGVRSALWMHV---IPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIP 241
GE+ RS L + +PG +VDVRD+AA+H A+L +G PRRY A
Sbjct 179 CGESTLLARSVLQGRLPFRLPG---VVPVVDVRDLAAVHVAVLSAGVAPRRYLAVAETPA 235
Query 242 VPELAKIL----GGSPA 254
+ E+ +++ GGSPA
Sbjct 236 MAEIQRLVAAAGGGSPA 252
>gi|333992290|ref|YP_004524904.1| nucleoside-diphosphate-sugar epimerase [Mycobacterium sp. JDM601]
gi|333488258|gb|AEF37650.1| nucleoside-diphosphate-sugar epimerase [Mycobacterium sp. JDM601]
Length=348
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/241 (40%), Positives = 130/241 (54%), Gaps = 1/241 (0%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKL-GVDVSDFAVADISDR 64
MR+ VTGGTG+VG T KA+ +AGH+VR LV + + +L + + DI D
Sbjct 1 MRIAVTGGTGYVGAHTVKAMLEAGHAVRLLVAPGCGDEPVIPRLRELGALEVLNGDIRDT 60
Query 65 DSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFT 124
V L+GCDAV+H+A +V T+ R+ M N + +L +AVE +DP+V VSS++
Sbjct 61 AVVAALLDGCDAVLHAAGVVGTNDRQEKLMWDINAYATEAILTRAVEAKLDPVVSVSSYS 120
Query 125 ALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQ 184
ALF P + D P G Y ++KA E AR LQD G PV +TYP V+GP
Sbjct 121 ALFPPPDGVIGPDSPTVPGRSAYARTKAYGERVARRLQDEGHPVVVTYPSSVVGPAFWTA 180
Query 185 FGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPE 244
G G + V P +VDVRDVA +H AL+ GRGP RY GG + E
Sbjct 181 PGVTERGWAPIVKYRVAPVVRGGMAMVDVRDVARVHEALMRPGRGPHRYLCGGIMVGFDE 240
Query 245 L 245
+
Sbjct 241 M 241
>gi|254820307|ref|ZP_05225308.1| NAD-dependent epimerase/dehydratase [Mycobacterium intracellulare
ATCC 13950]
Length=337
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/246 (39%), Positives = 131/246 (54%), Gaps = 4/246 (1%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLV--RNPARLKTSVAKLGVDVSDFAVADISD 63
M V VTGGTG++G T +A+ AGH V+ L +P + + LG D+
Sbjct 1 MLVAVTGGTGYLGAHTVRALIQAGHEVKLLAAPTDPTAVLDRLRALGP--VTVLTGDVRS 58
Query 64 RDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSF 123
+V E L G DA++H+A +V TD R M N + +L +AV L +DP+V VSS+
Sbjct 59 AATVEELLAGADALLHAAGVVGTDERRAQLMWDVNAYATEAILTRAVALALDPVVLVSSY 118
Query 124 TALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGD 183
+ALF P +S D P A G Y ++K + AR LQ+ GAPV +TYP V+GP G
Sbjct 119 SALFPPPDGVISPDSPTACGRSAYAKTKGYADRVARRLQETGAPVVVTYPSSVVGPAFGT 178
Query 184 QFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVP 243
G +G + V P +VDVRDVA +HA ++ +GRGPRRY GG +
Sbjct 179 APGVTEQGWAPIVRWAVAPKVRGGMQMVDVRDVADVHARIMRAGRGPRRYVCGGQLLTFD 238
Query 244 ELAKIL 249
E+ L
Sbjct 239 EMIDAL 244
>gi|330467654|ref|YP_004405397.1| NAD-dependent epimerase/dehydratase [Verrucosispora maris AB-18-032]
gi|328810625|gb|AEB44797.1| NAD-dependent epimerase/dehydratase [Verrucosispora maris AB-18-032]
Length=337
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/303 (40%), Positives = 154/303 (51%), Gaps = 33/303 (10%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVA--DISD 63
MRVLVTGGTGF+G TA A+ AGH VR LVR+P + ++ LG +D A D++D
Sbjct 1 MRVLVTGGTGFIGSHTAAALLRAGHEVRLLVRDPDTVGPALEPLGASTADVATVTGDVTD 60
Query 64 RDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSF 123
SV A++GC AV+H+A + + D R ++M N+ G + VL A ++ IVHVSS
Sbjct 61 ARSVGRAMDGCAAVLHAAGVYSFDTRRHAQMWQVNVGGTEVVLDAARAADVETIVHVSSV 120
Query 124 TALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP--- 180
AL A L+ DLPV + Y +KA E AR Q AG+PV ITYP LGP
Sbjct 121 VALAPTGGAPLATDLPVGRPRERYMATKAAAEEIARRHQAAGSPVIITYPMATLGPHDPY 180
Query 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTA----- 235
VGDQ +R L + PG G + + DVR+VA LH A L G GPRR A
Sbjct 181 VGDQAARLRALLRGQL--PIWPGGG--FPVGDVREVADLHVAALRPGPGPRRLLAPGRTL 236
Query 236 ------------GGHRIPVPEL--AKIL----GGSPAPRCWPSRCPIPR-CVSRDRCWIK 276
G R+PV L A +L S R WP P+ V C ++
Sbjct 237 STREFVAAVREVTGRRLPVAYLPSAAVLPVGAAASAFQRIWPWHVPVEYGAVYTCHCDLR 296
Query 277 PGP 279
GP
Sbjct 297 TGP 299
>gi|269126060|ref|YP_003299430.1| NAD-dependent epimerase/dehydratase [Thermomonospora curvata
DSM 43183]
gi|268311018|gb|ACY97392.1| NAD-dependent epimerase/dehydratase [Thermomonospora curvata
DSM 43183]
Length=343
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/239 (42%), Positives = 134/239 (57%), Gaps = 9/239 (3%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVS--DFAVADISD 63
MRVLVTG +GFVG T A+ +AGH+ R LVR+PA+ ++ G D + + D+ D
Sbjct 1 MRVLVTGASGFVGSHTVAALLEAGHTPRALVRDPAKATRALEAAGADPARVELVTGDMLD 60
Query 64 RDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSF 123
+V AL GC A +H+AA V R ++ N+ G +NV+G AVE G+DP+VHVS+
Sbjct 61 ETAVGRALEGCRAAIHAAAAVGVTGRGGD-LVEVNLGGTRNVVGGAVERGLDPVVHVSTV 119
Query 124 TALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGP--PV 181
P ++ D P+A YG+SK E Y R LQD GAPV + YPG V GP PV
Sbjct 120 AVFVPPRDPVITVDGPLASPRTAYGRSKVAAERYVRRLQDQGAPVTVVYPGGVCGPHQPV 179
Query 182 GDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
D E G +W +P G ++DVRD+A A L GRGPRR+ GGH +
Sbjct 180 LDSLMEGLVGALRLVWP--LPPGGVG--VIDVRDLAEALARALVPGRGPRRWLLGGHYL 234
>gi|120406142|ref|YP_955971.1| NAD-dependent epimerase/dehydratase [Mycobacterium vanbaalenii
PYR-1]
gi|119958960|gb|ABM15965.1| NAD-dependent epimerase/dehydratase [Mycobacterium vanbaalenii
PYR-1]
Length=316
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/230 (41%), Positives = 125/230 (55%), Gaps = 5/230 (2%)
Query 23 KAIADAGHSVRFLV---RNPARLKTSVAKLGVDVSDFAVADISDRDSVREALNGCDAVVH 79
+A+ +A H++R LV A + + LG DVS V D+ +V L G DAVVH
Sbjct 2 RALLEAQHTIRLLVLPQEQDAPVIRRLRSLG-DVS-VIVGDVRAESTVTALLTGVDAVVH 59
Query 80 SAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTALFRPNLATLSADLP 139
+A +V TD R M N + VL +AVELG+DP+V VSS++ALF P +SAD P
Sbjct 60 AAGVVGTDERRAQLMWDINAYATEQVLTRAVELGLDPVVSVSSYSALFPPPDGIISADSP 119
Query 140 VAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQFGEAGEGVRSALWMH 199
+ G Y ++K + AR LQDAGAPV +TYP V+GP G G G +
Sbjct 120 TSSGRSSYAKTKGYADRVARRLQDAGAPVVVTYPSSVVGPAFGTAAGVTERGWEPIVRAR 179
Query 200 VIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPELAKIL 249
V P A ++DVRDVA +H L+ GRGPRRY GG + E+ L
Sbjct 180 VAPRVRAGMQMIDVRDVADVHVRLMRPGRGPRRYVCGGVMLTFDEMIDAL 229
>gi|240168717|ref|ZP_04747376.1| oxidoreductase [Mycobacterium kansasii ATCC 12478]
Length=330
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/254 (36%), Positives = 130/254 (52%), Gaps = 18/254 (7%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVR----NPARLKTSVAKLGVDVSDFAV--- 58
M++ VTGGTG++G + + AGH VR L NP L +S+F
Sbjct 1 MQIAVTGGTGYLGAHIVRGLLTAGHRVRLLAEPGWNNPPLLH--------KLSEFGAITV 52
Query 59 --ADISDRDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDP 116
D+ D D++ L+ + V+H A +V TD R M N + VL QA + G+DP
Sbjct 53 IRGDVRDPDTISRLLDDAETVLHGAGVVGTDNRREKLMWEVNAYATEAVLRQAHQRGLDP 112
Query 117 IVHVSSFTALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMV 176
IV ++S++ALF P + D P + G Y ++K + AR LQD GAP+ +TYP V
Sbjct 113 IVSINSYSALFPPPGPVIGPDTPTSAGRSAYAKTKGYADRVARRLQDEGAPIVLTYPSSV 172
Query 177 LGPPVGDQFGEAGEGVRSALWMHVIPG-RGAAWLIVDVRDVAALHAALLESGRGPRRYTA 235
+GP G +G + + V P R A ++VDVRD+A +H A + GRGP+RY
Sbjct 173 VGPAYMTNPGITEQGWATIVRTGVAPRLRNAGMMMVDVRDIADVHVASMSPGRGPKRYLC 232
Query 236 GGHRIPVPELAKIL 249
GG + E+ L
Sbjct 233 GGVMLSFDEMINAL 246
>gi|126438189|ref|YP_001073880.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. JLS]
gi|126237989|gb|ABO01390.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. JLS]
Length=322
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/251 (38%), Positives = 129/251 (52%), Gaps = 7/251 (2%)
Query 23 KAIADAGHSVRFLVRNPAR---LKTSVAKLGVDVSDFAVADISDRDSVREALNGCDAVVH 79
+A+ GH VR LV A + +A+LG DV F+ DI D ++ L+GCDAV+H
Sbjct 18 RALLADGHRVRLLVGPDAEGAPVLEHLAELG-DVDVFS-GDIRDAMTIDRLLDGCDAVLH 75
Query 80 SAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTALFRPNLATLSADLP 139
A +V TD R + M N + +L QAV G DP++ VSS+++LF P + D P
Sbjct 76 GAGVVGTDNRRAALMWEVNAYATEALLTQAVRAGFDPVISVSSYSSLFPPPDGIIGPDTP 135
Query 140 VAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQFGEAGEGVRSALWMH 199
A G Y ++K + AR LQ GAPV +TYP V+GP G G +
Sbjct 136 PANGRSAYAKTKGYADRVARRLQAEGAPVVVTYPSSVVGPAFHTAPGVTERGWAPIVRFG 195
Query 200 VIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPELAKILGGSPAPRCWP 259
V P ++DVRDVAA+HAA ++ GRGPRRY GG I E+ L R
Sbjct 196 VAPRLRGGMQMIDVRDVAAVHAAAMKPGRGPRRYVCGGELITFDEMIDALKRGSGRRF-- 253
Query 260 SRCPIPRCVSR 270
R P+ + V R
Sbjct 254 RRIPVSQAVFR 264
>gi|108802207|ref|YP_642404.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. MCS]
gi|119871359|ref|YP_941311.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. KMS]
gi|108772626|gb|ABG11348.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. MCS]
gi|119697448|gb|ABL94521.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. KMS]
Length=322
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/251 (38%), Positives = 129/251 (52%), Gaps = 7/251 (2%)
Query 23 KAIADAGHSVRFLVRNPAR---LKTSVAKLGVDVSDFAVADISDRDSVREALNGCDAVVH 79
+A+ GH VR LV A + +A+LG DV F+ DI D ++ L+GCDAV+H
Sbjct 18 RALLADGHRVRLLVGPDAEGAPVLEHLAELG-DVDVFS-GDIRDAMTIDLLLDGCDAVLH 75
Query 80 SAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTALFRPNLATLSADLP 139
A +V TD R + M N + +L QAV G+DP++ VSS+++LF P + D P
Sbjct 76 GAGVVGTDNRRAALMWEVNAYATEALLTQAVRAGLDPVISVSSYSSLFPPPDGIIGPDTP 135
Query 140 VAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPPVGDQFGEAGEGVRSALWMH 199
A G Y ++K + AR LQ GAPV +TYP V+GP G G +
Sbjct 136 PANGRSAYAKTKGYADRVARRLQAEGAPVVVTYPSSVVGPAFHTAPGVTERGWAPIVRFG 195
Query 200 VIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRIPVPELAKILGGSPAPRCWP 259
V P ++DVRDVAA+HAA ++ GRGPRRY GG I + L R
Sbjct 196 VAPRLRGGMQMIDVRDVAAVHAAAMKPGRGPRRYVCGGELITFDGMIDALERGSGRRF-- 253
Query 260 SRCPIPRCVSR 270
R P+ + V R
Sbjct 254 RRIPVSQAVFR 264
>gi|256378122|ref|YP_003101782.1| NAD-dependent epimerase/dehydratase [Actinosynnema mirum DSM
43827]
gi|255922425|gb|ACU37936.1| NAD-dependent epimerase/dehydratase [Actinosynnema mirum DSM
43827]
Length=336
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/261 (40%), Positives = 131/261 (51%), Gaps = 13/261 (4%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVS--DFAVADISD 63
M V +TGGTGFVG T A+ AGH VR LVR+P + T++ LGVD+S D V D +D
Sbjct 1 MLVTLTGGTGFVGAHTTAALVRAGHHVRLLVRDPTAVPTALDPLGVDLSAVDAEVGDATD 60
Query 64 RDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSF 123
+ A+ G DAV+H+AA+ + D R + ML N + VL A G IVHVSS
Sbjct 61 EAAATRAVRGADAVLHAAAVYSFDRRRRAEMLRVNTRATEVVLSAARRSGAARIVHVSST 120
Query 124 TALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLG---PP 180
ALF P + + P + Y +K+ E A Q AGAPV I+ P +LG P
Sbjct 121 AALFGPGVRVVDDHTPPGASREPYAATKSASEAIAGAHQRAGAPVVISRPPALLGPHDPK 180
Query 181 VGDQFGEAGEGVRSALWMHVIPGRGAAWLIVDVRDVAALHAALLESGRGPRRYTAGGHRI 240
GDQ + VR M V P A I DVRD A LH LLE GR + G I
Sbjct 181 TGDQTRRLRDTVRGI--MPVWP--SGALQIGDVRDTARLHTTLLE-GRAGGAHFGPGRLI 235
Query 241 PVPEL---AKILGGSPAPRCW 258
PE A+ G P P +
Sbjct 236 TTPEYVAEARRASGRPLPTVF 256
>gi|271968186|ref|YP_003342382.1| NAD-dependent epimerase/dehydratase [Streptosporangium roseum
DSM 43021]
gi|270511361|gb|ACZ89639.1| NAD-dependent epimerase/dehydratase [Streptosporangium roseum
DSM 43021]
Length=347
Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/184 (45%), Positives = 105/184 (58%), Gaps = 5/184 (2%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVS--DFAVADISD 63
M V TGGTGFVG + AI GH VR LVR+ +++K ++A L VD+ D D++D
Sbjct 1 MLVSATGGTGFVGAHSVAAIVGMGHRVRMLVRDVSKVKRALAPLNVDLDAVDVVTGDVTD 60
Query 64 RDSVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSF 123
DSV A+ G DAV+H+A++ + D R RM N G + VL A G DPI+HVSS
Sbjct 61 ADSVARAVRGADAVLHAASVYSFDSRLHMRMRQVNERGTEIVLDAARRAGADPIIHVSSV 120
Query 124 TALFRPNLATLSADLPVAGGTDGYGQSKAQIEIYARGLQDAGAPVNITYPGMVLGPP--- 180
A+F + D PV + Y SKA E+ AR Q GAPV ITYP +LGP
Sbjct 121 VAMFPARGQVIHEDSPVGRPRETYMASKAAAEVIARRHQAEGAPVVITYPPALLGPDDPN 180
Query 181 VGDQ 184
+GDQ
Sbjct 181 LGDQ 184
>gi|298251577|ref|ZP_06975380.1| NAD-dependent epimerase/dehydratase [Ktedonobacter racemifer
DSM 44963]
gi|297546169|gb|EFH80037.1| NAD-dependent epimerase/dehydratase [Ktedonobacter racemifer
DSM 44963]
Length=332
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/268 (32%), Positives = 128/268 (48%), Gaps = 26/268 (9%)
Query 6 MRVLVTGGTGFVGGWTAKAIADAGHSVRFLVRNPARLKTSVAKLGVDVSDFAVADISDRD 65
M+ VTG TGF+GG A+ + AGH V L R P+R + ++ LGV V DI+D++
Sbjct 1 MKYFVTGATGFIGGCVARQLLVAGHKVITLARTPSRAQ-ALEALGVKVH---AGDITDKE 56
Query 66 SVREALNGCDAVVHSAALVATDPRETSRMLSTNMAGAQNVLGQAVELGMDPIVHVSSFTA 125
S+R + G D + H AA R+TS+ + N+ G +NVL ELG+ V+ S+ T
Sbjct 57 SLRTPMTGVDGIFHIAAWYKIGARDTSQAETINVDGTRNVLTMMKELGIPKGVYTSTLTV 116
Query 126 LFRPNLATLSADLPVAGGT--DGYGQS--KAQIEIYARGLQDAGAPVNITYPGMVLGPPV 181
+ + G T + Y ++ KA E+ AR + AG P+ I PG+V GP
Sbjct 117 FSDTRGQIVDENYTYTGTTFLNEYDRTKWKAHYEV-ARPMMQAGLPLVIVQPGLVYGP-- 173
Query 182 GDQFGEAGEGVRSALWMHVIPGR------GAAWLIVDVRDVAALHAALLESGRGPRRYTA 235
GD + W++ + G+ G + V D A H +E G+ Y
Sbjct 174 GDA------SIVHEGWVNYLRGKLPMTPSGTTYCWGHVDDTAHGHLLAMEQGKVGESYII 227
Query 236 GGHRIPVPE---LAKILGGSPAPRCWPS 260
G + + E LA+ + G APR P+
Sbjct 228 AGPKYSLIEAFTLAEQISGVRAPRLHPA 255
Lambda K H
0.321 0.136 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 527502211620
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40