BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3738c Length=315 Score E Sequences producing significant alignments: (Bits) Value gi|57117150|ref|YP_178009.1| PPE family protein [Mycobacterium t... 597 8e-169 gi|289445339|ref|ZP_06435083.1| PPE family protein [Mycobacteriu... 597 8e-169 gi|289441176|ref|ZP_06430920.1| PPE family protein [Mycobacteriu... 596 1e-168 gi|289748258|ref|ZP_06507636.1| PPE family protein [Mycobacteriu... 595 3e-168 gi|289571983|ref|ZP_06452210.1| PPE family protein [Mycobacteriu... 594 5e-168 gi|289755869|ref|ZP_06515247.1| PPE family protein [Mycobacteriu... 593 1e-167 gi|289763919|ref|ZP_06523297.1| ppe family protein [Mycobacteriu... 564 8e-159 gi|340628712|ref|YP_004747164.1| ppe family protein [Mycobacteri... 522 3e-146 gi|240169092|ref|ZP_04747751.1| PPE family protein [Mycobacteriu... 228 1e-57 gi|183983007|ref|YP_001851298.1| PPE family protein [Mycobacteri... 209 4e-52 gi|183983008|ref|YP_001851299.1| PPE family protein [Mycobacteri... 206 4e-51 gi|57117048|ref|YP_177920.1| PPE family protein [Mycobacterium t... 205 6e-51 gi|18202062|sp|O53268.2|PPE47_MYCTU RecName: Full=Uncharacterize... 205 8e-51 gi|31794199|ref|NP_856692.1| PPE family protein [Mycobacterium b... 204 1e-50 gi|254233098|ref|ZP_04926425.1| PPE family protein [Mycobacteriu... 204 1e-50 gi|15842584|ref|NP_337621.1| PPE family protein [Mycobacterium t... 204 1e-50 gi|323718358|gb|EGB27533.1| PPE family protein [Mycobacterium tu... 204 2e-50 gi|308369932|ref|ZP_07419565.2| PPE family protein [Mycobacteriu... 204 2e-50 gi|339295856|gb|AEJ47967.1| PPE family protein [Mycobacterium tu... 202 4e-50 gi|340628014|ref|YP_004746466.1| ppe family protein [Mycobacteri... 202 5e-50 gi|183980812|ref|YP_001849103.1| PPE family protein [Mycobacteri... 186 3e-45 gi|183983621|ref|YP_001851912.1| PPE family protein [Mycobacteri... 170 3e-40 gi|240169845|ref|ZP_04748504.1| PPE family protein [Mycobacteriu... 160 3e-37 gi|240168963|ref|ZP_04747622.1| PPE family protein [Mycobacteriu... 158 1e-36 gi|240168498|ref|ZP_04747157.1| PPE family protein, PPE4 [Mycoba... 158 1e-36 gi|183984882|ref|YP_001853173.1| PPE family protein [Mycobacteri... 152 7e-35 gi|118616333|ref|YP_904665.1| PPE family protein [Mycobacterium ... 152 7e-35 gi|183982660|ref|YP_001850951.1| PPE family protein [Mycobacteri... 149 5e-34 gi|183984239|ref|YP_001852530.1| PPE family protein [Mycobacteri... 148 9e-34 gi|118618500|ref|YP_906832.1| PPE family protein [Mycobacterium ... 147 2e-33 gi|183982899|ref|YP_001851190.1| PPE family protein [Mycobacteri... 143 4e-32 gi|183983369|ref|YP_001851660.1| PPE family protein [Mycobacteri... 140 2e-31 gi|240171575|ref|ZP_04750234.1| PPE family protein [Mycobacteriu... 137 3e-30 gi|240171402|ref|ZP_04750061.1| PPE family protein [Mycobacteriu... 135 9e-30 gi|240171810|ref|ZP_04750469.1| PPE family protein [Mycobacteriu... 132 9e-29 gi|240168396|ref|ZP_04747055.1| PPE family protein [Mycobacteriu... 131 2e-28 gi|183983368|ref|YP_001851659.1| PPE family protein [Mycobacteri... 130 2e-28 gi|183984867|ref|YP_001853158.1| PPE family protein [Mycobacteri... 127 2e-27 gi|240173310|ref|ZP_04751968.1| PPE family protein [Mycobacteriu... 127 3e-27 gi|344220856|gb|AEN01487.1| PPE family protein [Mycobacterium tu... 126 4e-27 gi|289448696|ref|ZP_06438440.1| LOW QUALITY PROTEIN: PPE family ... 126 4e-27 gi|307081148|ref|ZP_07490318.1| putative PPE family protein [Myc... 126 4e-27 gi|306973438|ref|ZP_07486099.1| putative PPE family protein [Myc... 126 5e-27 gi|306777323|ref|ZP_07415660.1| PPE family protein [Mycobacteriu... 125 6e-27 gi|298526488|ref|ZP_07013897.1| PPE family protein [Mycobacteriu... 125 7e-27 gi|323718351|gb|EGB27527.1| PPE family protein [Mycobacterium tu... 125 8e-27 gi|344220853|gb|AEN01484.1| PPE family protein [Mycobacterium tu... 125 8e-27 gi|15842579|ref|NP_337616.1| PPE family protein [Mycobacterium t... 125 9e-27 gi|340628008|ref|YP_004746460.1| PPE family protein [Mycobacteri... 125 1e-26 gi|297732644|ref|ZP_06961762.1| PPE family protein [Mycobacteriu... 125 1e-26 >gi|57117150|ref|YP_178009.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148663604|ref|YP_001285127.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148824943|ref|YP_001289697.1| PPE family protein [Mycobacterium tuberculosis F11] 44 more sequence titles Length=315 Score = 597 bits (1539), Expect = 8e-169, Method: Compositional matrix adjust. Identities = 315/315 (100%), Positives = 315/315 (100%), Gaps = 0/315 (0%) Query 1 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS 60 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS Sbjct 1 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS 60 Query 61 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI 120 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI Sbjct 61 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI 120 Query 121 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSVIAVPTS 180 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSVIAVPTS Sbjct 121 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSVIAVPTS 180 Query 181 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA 240 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA Sbjct 181 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA 240 Query 241 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPM 300 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPM Sbjct 241 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPM 300 Query 301 VPASWEQLVGAGEAG 315 VPASWEQLVGAGEAG Sbjct 301 VPASWEQLVGAGEAG 315 >gi|289445339|ref|ZP_06435083.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289418297|gb|EFD15498.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=410 Score = 597 bits (1539), Expect = 8e-169, Method: Compositional matrix adjust. Identities = 315/315 (100%), Positives = 315/315 (100%), Gaps = 0/315 (0%) Query 1 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS 60 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS Sbjct 96 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS 155 Query 61 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI 120 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI Sbjct 156 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI 215 Query 121 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSVIAVPTS 180 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSVIAVPTS Sbjct 216 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSVIAVPTS 275 Query 181 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA 240 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA Sbjct 276 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA 335 Query 241 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPM 300 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPM Sbjct 336 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPM 395 Query 301 VPASWEQLVGAGEAG 315 VPASWEQLVGAGEAG Sbjct 396 VPASWEQLVGAGEAG 410 >gi|289441176|ref|ZP_06430920.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289414095|gb|EFD11335.1| PPE family protein [Mycobacterium tuberculosis T46] Length=427 Score = 596 bits (1537), Expect = 1e-168, Method: Compositional matrix adjust. Identities = 314/315 (99%), Positives = 314/315 (99%), Gaps = 0/315 (0%) Query 1 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS 60 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS Sbjct 113 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS 172 Query 61 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI 120 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI Sbjct 173 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI 232 Query 121 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSVIAVPTS 180 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVL GSVIAVPTS Sbjct 233 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLNGSVIAVPTS 292 Query 181 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA 240 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA Sbjct 293 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA 352 Query 241 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPM 300 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPM Sbjct 353 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPM 412 Query 301 VPASWEQLVGAGEAG 315 VPASWEQLVGAGEAG Sbjct 413 VPASWEQLVGAGEAG 427 >gi|289748258|ref|ZP_06507636.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289688845|gb|EFD56274.1| PPE family protein [Mycobacterium tuberculosis T92] Length=410 Score = 595 bits (1534), Expect = 3e-168, Method: Compositional matrix adjust. Identities = 314/315 (99%), Positives = 314/315 (99%), Gaps = 0/315 (0%) Query 1 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS 60 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS Sbjct 96 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS 155 Query 61 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI 120 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI Sbjct 156 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI 215 Query 121 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSVIAVPTS 180 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVL GSVIAVPTS Sbjct 216 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLNGSVIAVPTS 275 Query 181 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA 240 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA Sbjct 276 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA 335 Query 241 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPM 300 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPM Sbjct 336 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPM 395 Query 301 VPASWEQLVGAGEAG 315 VPASWEQLVGAGEAG Sbjct 396 VPASWEQLVGAGEAG 410 >gi|289571983|ref|ZP_06452210.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289545737|gb|EFD49385.1| PPE family protein [Mycobacterium tuberculosis T17] Length=315 Score = 594 bits (1532), Expect = 5e-168, Method: Compositional matrix adjust. Identities = 314/315 (99%), Positives = 314/315 (99%), Gaps = 0/315 (0%) Query 1 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS 60 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS Sbjct 1 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS 60 Query 61 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI 120 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI Sbjct 61 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI 120 Query 121 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSVIAVPTS 180 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVL GSVIAVPTS Sbjct 121 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLNGSVIAVPTS 180 Query 181 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA 240 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA Sbjct 181 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA 240 Query 241 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPM 300 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPM Sbjct 241 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPM 300 Query 301 VPASWEQLVGAGEAG 315 VPASWEQLVGAGEAG Sbjct 301 VPASWEQLVGAGEAG 315 >gi|289755869|ref|ZP_06515247.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|289696456|gb|EFD63885.1| PPE family protein [Mycobacterium tuberculosis EAS054] Length=315 Score = 593 bits (1529), Expect = 1e-167, Method: Compositional matrix adjust. Identities = 313/315 (99%), Positives = 314/315 (99%), Gaps = 0/315 (0%) Query 1 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS 60 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS Sbjct 1 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS 60 Query 61 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI 120 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI Sbjct 61 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI 120 Query 121 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSVIAVPTS 180 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVL GSVIAVPTS Sbjct 121 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLNGSVIAVPTS 180 Query 181 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA 240 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAA+RPEA Sbjct 181 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAALRPEA 240 Query 241 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPM 300 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPM Sbjct 241 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPM 300 Query 301 VPASWEQLVGAGEAG 315 VPASWEQLVGAGEAG Sbjct 301 VPASWEQLVGAGEAG 315 >gi|289763919|ref|ZP_06523297.1| ppe family protein [Mycobacterium tuberculosis GM 1503] gi|289711425|gb|EFD75441.1| ppe family protein [Mycobacterium tuberculosis GM 1503] Length=303 Score = 564 bits (1453), Expect = 8e-159, Method: Compositional matrix adjust. Identities = 299/299 (100%), Positives = 299/299 (100%), Gaps = 0/299 (0%) Query 1 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS 60 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS Sbjct 1 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS 60 Query 61 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI 120 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI Sbjct 61 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI 120 Query 121 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSVIAVPTS 180 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSVIAVPTS Sbjct 121 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSVIAVPTS 180 Query 181 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA 240 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA Sbjct 181 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA 240 Query 241 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVP 299 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVP Sbjct 241 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVP 299 >gi|340628712|ref|YP_004747164.1| ppe family protein [Mycobacterium canettii CIPT 140010059] gi|340006902|emb|CCC46091.1| ppe family protein [Mycobacterium canettii CIPT 140010059] Length=398 Score = 522 bits (1344), Expect = 3e-146, Method: Compositional matrix adjust. Identities = 297/315 (95%), Positives = 299/315 (95%), Gaps = 12/315 (3%) Query 1 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS 60 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS Sbjct 96 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS 155 Query 61 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI 120 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI Sbjct 156 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLI 215 Query 121 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSVIAVPTS 180 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSVIAVPTS Sbjct 216 SLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSVIAVPTS 275 Query 181 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVRPEA 240 LSTSLSTAVPIGVGQYLADLAS DAQAIEVGLKTADVAPVAVRP AAPPLRESAAVRP A Sbjct 276 LSTSLSTAVPIGVGQYLADLASVDAQAIEVGLKTADVAPVAVRPGAAPPLRESAAVRPGA 335 Query 241 RLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPM 300 R VSAV AS+RGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGG+PSVPM Sbjct 336 RPVSAV------------ASERGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGNPSVPM 383 Query 301 VPASWEQLVGAGEAG 315 VPASWEQLVGAGEAG Sbjct 384 VPASWEQLVGAGEAG 398 >gi|240169092|ref|ZP_04747751.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=397 Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 187/310 (61%), Positives = 225/310 (73%), Gaps = 27/310 (8%) Query 12 MPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALA 71 MPTL ELAANHT+HAVL+GTNFFGINTIPIALNEADY RMW+QAATTMS Y+ + ALA Sbjct 107 MPTLAELAANHTTHAVLVGTNFFGINTIPIALNEADYMRMWVQAATTMSGYQAVAGTALA 166 Query 72 SAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLISLEILFAIVAY 131 SAPQTTPAPVL N G G A+A+P I+A + + III ILIQ+ LISLEILFAIVAY Sbjct 167 SAPQTTPAPVLLNAGLGAAAAIPGIAATVGE----LPIIIVILIQIILISLEILFAIVAY 222 Query 132 TIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSVIAVPTSLSTSLSTAVPI 191 I+I LI PL+IF YAIVFA+LA+I GPPLL+IASPF+L GS++A+P + + LSTA+PI Sbjct 223 AIVIALITPLLIFTYAIVFAILALILGPPLLLIASPFLLGGSLLALPAAAAIPLSTALPI 282 Query 192 GVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESAAVR------PEARLVSA 245 G+ QYLA ADA+ LKTAD PVA A + ES+ VR PEARLVSA Sbjct 283 GITQYLA----ADAE-----LKTADAVPVAAPAVMASAVSESSPVRSAASRAPEARLVSA 333 Query 246 VAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASW 305 V P SV+ASD+GAG+ GFAGTA KE+V +P+GL + GE +PM+PA+W Sbjct 334 VEP------GSVVASDQGAGLSGFAGTAIKETVTQPSGLADVPAGELASGARMPMLPATW 387 Query 306 E--QLVGAGE 313 E QL +G Sbjct 388 ESKQLAASGH 397 >gi|183983007|ref|YP_001851298.1| PPE family protein [Mycobacterium marinum M] gi|183176333|gb|ACC41443.1| PPE family protein [Mycobacterium marinum M] Length=398 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 158/306 (52%), Positives = 195/306 (64%), Gaps = 20/306 (6%) Query 12 MPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALA 71 MPTL ELA NH +HAVLLGTNFFGINTIPIALNEADYARMW+QAAT MS+Y+ S AALA Sbjct 101 MPTLAELAGNHATHAVLLGTNFFGINTIPIALNEADYARMWVQAATVMSVYQAGSTAALA 160 Query 72 SAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLISLEILFAIVAY 131 +AP+ PAPV+ GA + A+ AA D S I+ IL+Q+ LI LEIL+AIVAY Sbjct 161 AAPRGMPAPVVLKAGAAEGVSAAALPAAPADGPS----ILWILVQIILILLEILYAIVAY 216 Query 132 TIIIVLILPLVIFAYAIVFAVLAIIFG-----------PPLLVIASPFVLTGSVIAVPTS 180 TII+ +LP +I A VF +L ++F PPLL IA+P +L G+VI + T Sbjct 217 TIILAFVLPFLILVEAFVFTILGLMFSIFVGFLGLLFGPPLLTIAAPLLLNGAVIGLSTG 276 Query 181 LSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTAD-VAPVAVRPAAAPPLRESAAVRPE 239 + SL+TA+PIG+ YLAD ++ E+G D V V R AP L ES A P Sbjct 277 VPVSLATALPIGIPAYLAD----QSRRGELGDAGQDQVVFVGARGGMAPSLAESTAPAPA 332 Query 240 ARLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVP 299 A L SA + PA AS +AS+RGA + FAGT+ K S RPAGL L G EF G P Sbjct 333 AGLASAGSAVPASNPASAVASERGADMSNFAGTSAKGSTVRPAGLMMLGGSEFEGGLREP 392 Query 300 MVPASW 305 M+PA+W Sbjct 393 MLPATW 398 >gi|183983008|ref|YP_001851299.1| PPE family protein [Mycobacterium marinum M] gi|183176334|gb|ACC41444.1| PPE family protein [Mycobacterium marinum M] Length=396 Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 162/299 (55%), Positives = 202/299 (68%), Gaps = 17/299 (5%) Query 12 MPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALA 71 MPTL ELA NH +HAVLLGTNFFGINTIPIALNEADYARMW+QAAT MS+YE S AALA Sbjct 101 MPTLAELAINHAAHAVLLGTNFFGINTIPIALNEADYARMWVQAATVMSVYEAGSTAALA 160 Query 72 SAPQTTPAPVLFNGGA--GVASALPAISAATLDPASIIGIIIEILIQLFLISLEILFAIV 129 +AP+ PAPV+ GA GV++A +AA L III ILIQ+ L+ LEIL+AIV Sbjct 161 AAPRGVPAPVVLKAGAAEGVSAAALPAAAAELP------IIIVILIQIILVLLEILYAIV 214 Query 130 AYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSVIAVPTSLSTSLSTAV 189 AYTII+ +ILP+++ A V +V+A+I G P+L+++SPF+LTGS+I + + SL+TA+ Sbjct 215 AYTIILSIILPIIVVVEAFVLSVVAVILGTPILLVSSPFLLTGSLIGLTAGVPVSLATAL 274 Query 190 PIGVGQYLADLASADAQAIEVGLKTAD---VAPVAVRPAAAPPLRESAAVRPEARLVSAV 246 PIG+ YLAD + D L D V V R AP L S A P A L SA Sbjct 275 PIGIPAYLADQSRRDE------LNDTDQEHVVFVGARAGMAPLLTASTAPAPAAGLASAG 328 Query 247 APAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASW 305 + PA S S +AS+RGA + FAGT+ K SVG+PAGLT L G EF G PM+PA+W Sbjct 329 SAVPASNSVSTVASERGADMSSFAGTSTKGSVGQPAGLTALGGSEFEGGSREPMLPATW 387 >gi|57117048|ref|YP_177920.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|7478802|pir||H70857 probable PPE protein - Mycobacterium tuberculosis (strain H37RV) gi|41352777|emb|CAE55541.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] Length=358 Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 158/349 (46%), Positives = 198/349 (57%), Gaps = 55/349 (15%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALA MPTL ELAANH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 23 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 82 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASI--IGIIIEILIQLF---- 118 AAL + P T PAPV+ GA AS A++AAT+ P + +E+ Q F Sbjct 83 VVGAALVATPHTGPAPVIVKPGANEASN--AVAAATITPFPFGELAKFLEMAAQAFTEVG 140 Query 119 --------------------LISLE----------ILFAIVAYTIIIVLILPLVIFAYAI 148 L++ E + FA V + + + +++PL+ FA + Sbjct 141 ELIMKSAEAWAVGFVELITGLVNFEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVL 200 Query 149 VFAVLAIIFGPPLLVIASPFVLTGSVIAVPTSLSTSLSTAVPIGVGQYLADLASADAQAI 208 A+L+I + +I++ F G++ + L +L+ AV GV A LA A Sbjct 201 ELAILSIGW-----IISNIF---GAIPVLGGPLLGALAAAVVPGV----AGLAGVAGLAA 248 Query 209 EVGLKTADVAPVAVRPAAAPPLRESAAVRPEARLVSAVAPAPAGTSASVLASDRGAGVLG 268 + A AP A+ + AP V P+ARLVSAV PAPA TS SVLASDRGAG LG Sbjct 249 LPAVGAAAGAPAALVGSVAP--VSGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALG 306 Query 269 FAGTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASW-EQLVG-AGEAG 315 F GTAGKESVG+PAGLT LA EFG VPM+P SW LVG AG+ G Sbjct 307 FVGTAGKESVGQPAGLTVLA-DEFGDGAPVPMLPGSWGPDLVGVAGDGG 354 >gi|18202062|sp|O53268.2|PPE47_MYCTU RecName: Full=Uncharacterized PPE family protein PPE47/PPE48 Length=435 Score = 205 bits (521), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 158/349 (46%), Positives = 198/349 (57%), Gaps = 55/349 (15%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALA MPTL ELAANH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 100 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 159 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASI--IGIIIEILIQLF---- 118 AAL + P T PAPV+ GA AS A++AAT+ P + +E+ Q F Sbjct 160 VVGAALVATPHTGPAPVIVKPGANEASN--AVAAATITPFPFGELAKFLEMAAQAFTEVG 217 Query 119 --------------------LISLE----------ILFAIVAYTIIIVLILPLVIFAYAI 148 L++ E + FA V + + + +++PL+ FA + Sbjct 218 ELIMKSAEAWAVGFVELITGLVNFEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVL 277 Query 149 VFAVLAIIFGPPLLVIASPFVLTGSVIAVPTSLSTSLSTAVPIGVGQYLADLASADAQAI 208 A+L+I + +I++ F G++ + L +L+ AV GV A LA A Sbjct 278 ELAILSIGW-----IISNIF---GAIPVLGGPLLGALAAAVVPGV----AGLAGVAGLAA 325 Query 209 EVGLKTADVAPVAVRPAAAPPLRESAAVRPEARLVSAVAPAPAGTSASVLASDRGAGVLG 268 + A AP A+ + AP V P+ARLVSAV PAPA TS SVLASDRGAG LG Sbjct 326 LPAVGAAAGAPAALVGSVAP--VSGGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALG 383 Query 269 FAGTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASW-EQLVG-AGEAG 315 F GTAGKESVG+PAGLT LA EFG VPM+P SW LVG AG+ G Sbjct 384 FVGTAGKESVGQPAGLTVLA-DEFGDGAPVPMLPGSWGPDLVGVAGDGG 431 >gi|31794199|ref|NP_856692.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|121638904|ref|YP_979128.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991396|ref|YP_002646085.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] 7 more sequence titles Length=435 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 152/349 (44%), Positives = 192/349 (56%), Gaps = 55/349 (15%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALA MPTL ELAANH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 100 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 159 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASI--IGIIIEILIQLF---- 118 AAL + P T PAPV+ GA AS A++AAT+ P + +E+ Q F Sbjct 160 VVGAALVATPHTGPAPVIVKPGANEASN--AVAAATITPFPFGELAKFLEMAAQAFTEVG 217 Query 119 --------------------LISLE----------ILFAIVAYTIIIVLILPLVIFAYAI 148 L++ E + FA V + + + +++PL+ FA + Sbjct 218 ELIMKSAEAWAVGFVELITGLVNFEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVL 277 Query 149 VFAVLAIIFGPPLLVIASPFVLTGSVIAVPTSLSTSLSTAVPIGVGQYLADLASADAQAI 208 A+L+I + +I++ F G++ + L +L+ AV GV A A+ Sbjct 278 ELAILSIGW-----IISNIF---GAIPVLAGPLLGALAAAVVPGVAGVTGLAGLAAVPAV 329 Query 209 EVGLKTADVAPVAVRPAAAPPLRESAAVRPEARLVSAVAPAPAGTSASVLASDRGAGVLG 268 +V P + V P+ARLVSAV PAPA TS SVLASDRGAG LG Sbjct 330 GAAAGAPAALVGSVAPVS------GGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALG 383 Query 269 FAGTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASW-EQLVG-AGEAG 315 F GTAGKESVG+PAGLT LA EFG VPM+P SW LVG AG+ G Sbjct 384 FVGTAGKESVGQPAGLTVLA-DEFGDGAPVPMLPGSWGPDLVGVAGDGG 431 >gi|254233098|ref|ZP_04926425.1| PPE family protein [Mycobacterium tuberculosis C] gi|124602157|gb|EAY61167.1| PPE family protein [Mycobacterium tuberculosis C] Length=427 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 152/349 (44%), Positives = 192/349 (56%), Gaps = 55/349 (15%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALA MPTL ELAANH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 92 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 151 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASI--IGIIIEILIQLF---- 118 AAL + P T PAPV+ GA AS A++AAT+ P + +E+ Q F Sbjct 152 VVGAALVATPHTGPAPVIVKPGANEASN--AVAAATITPFPFGELAKFLEMAAQAFTEVG 209 Query 119 --------------------LISLE----------ILFAIVAYTIIIVLILPLVIFAYAI 148 L++ E + FA V + + + +++PL+ FA + Sbjct 210 ELIMKSAEAWAVGFVELITGLVNFEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVL 269 Query 149 VFAVLAIIFGPPLLVIASPFVLTGSVIAVPTSLSTSLSTAVPIGVGQYLADLASADAQAI 208 A+L+I + +I++ F G++ + L +L+ AV GV A A+ Sbjct 270 ELAILSIGW-----IISNIF---GAIPVLAGPLLGALAAAVVPGVAGVTGLAGLAAVPAV 321 Query 209 EVGLKTADVAPVAVRPAAAPPLRESAAVRPEARLVSAVAPAPAGTSASVLASDRGAGVLG 268 +V P + V P+ARLVSAV PAPA TS SVLASDRGAG LG Sbjct 322 GAAAGAPAALVGSVAPVS------GGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALG 375 Query 269 FAGTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASW-EQLVG-AGEAG 315 F GTAGKESVG+PAGLT LA EFG VPM+P SW LVG AG+ G Sbjct 376 FVGTAGKESVGQPAGLTVLA-DEFGDGAPVPMLPGSWGPDLVGVAGDGG 423 >gi|15842584|ref|NP_337621.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|148662873|ref|YP_001284396.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148824212|ref|YP_001288966.1| PPE family protein [Mycobacterium tuberculosis F11] 17 more sequence titles Length=435 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 152/349 (44%), Positives = 192/349 (56%), Gaps = 55/349 (15%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALA MPTL ELAANH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 100 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 159 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASI--IGIIIEILIQLF---- 118 AAL + P T PAPV+ GA AS A++AAT+ P + +E+ Q F Sbjct 160 VVGAALVATPHTGPAPVIVKPGANEASN--AVAAATITPFPFGELAKFLEMAAQAFTEVG 217 Query 119 --------------------LISLE----------ILFAIVAYTIIIVLILPLVIFAYAI 148 L++ E + FA V + + + +++PL+ FA + Sbjct 218 ELIMKSAEAWAVGFVELITGLVNFEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVL 277 Query 149 VFAVLAIIFGPPLLVIASPFVLTGSVIAVPTSLSTSLSTAVPIGVGQYLADLASADAQAI 208 A+L+I + +I++ F G++ + L +L+ AV GV A A+ Sbjct 278 ELAILSIGW-----IISNIF---GAIPVLAGPLLGALAAAVVPGVAGVTGLAGLAAVPAV 329 Query 209 EVGLKTADVAPVAVRPAAAPPLRESAAVRPEARLVSAVAPAPAGTSASVLASDRGAGVLG 268 +V P + V P+ARLVSAV PAPA TS SVLASDRGAG LG Sbjct 330 GAAAGAPAALVGSVAPVS------GGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALG 383 Query 269 FAGTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASW-EQLVG-AGEAG 315 F GTAGKESVG+PAGLT LA EFG VPM+P SW LVG AG+ G Sbjct 384 FVGTAGKESVGQPAGLTVLA-DEFGDGAPVPMLPGSWGPDLVGVAGDGG 431 >gi|323718358|gb|EGB27533.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=380 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 152/349 (44%), Positives = 192/349 (56%), Gaps = 55/349 (15%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALA MPTL ELAANH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 45 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 104 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASI--IGIIIEILIQLF---- 118 AAL + P T PAPV+ GA AS A++AAT+ P + +E+ Q F Sbjct 105 VVGAALVATPHTGPAPVIVKPGANEASN--AVAAATITPFPFGELAKFLEMAAQAFTEVG 162 Query 119 --------------------LISLE----------ILFAIVAYTIIIVLILPLVIFAYAI 148 L++ E + FA V + + + +++PL+ FA + Sbjct 163 ELIMKSAEAWAVGFVELITGLVNFEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVL 222 Query 149 VFAVLAIIFGPPLLVIASPFVLTGSVIAVPTSLSTSLSTAVPIGVGQYLADLASADAQAI 208 A+L+I + +I++ F G++ + L +L+ AV GV A A+ Sbjct 223 ELAILSIGW-----IISNIF---GAIPVLAGPLLGALAAAVVPGVAGVTGLAGLAAVPAV 274 Query 209 EVGLKTADVAPVAVRPAAAPPLRESAAVRPEARLVSAVAPAPAGTSASVLASDRGAGVLG 268 +V P + V P+ARLVSAV PAPA TS SVLASDRGAG LG Sbjct 275 GAAAGAPAALVGSVAPVS------GGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALG 328 Query 269 FAGTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASW-EQLVG-AGEAG 315 F GTAGKESVG+PAGLT LA EFG VPM+P SW LVG AG+ G Sbjct 329 FVGTAGKESVGQPAGLTVLA-DEFGDGAPVPMLPGSWGPDLVGVAGDGG 376 >gi|308369932|ref|ZP_07419565.2| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308372320|ref|ZP_07667350.1| PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308373603|ref|ZP_07433020.2| PPE family protein [Mycobacterium tuberculosis SUMu005] 9 more sequence titles Length=431 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 152/349 (44%), Positives = 192/349 (56%), Gaps = 55/349 (15%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALA MPTL ELAANH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 96 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 155 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASI--IGIIIEILIQLF---- 118 AAL + P T PAPV+ GA AS A++AAT+ P + +E+ Q F Sbjct 156 VVGAALVATPHTGPAPVIVKPGANEASN--AVAAATITPFPFGELAKFLEMAAQAFTEVG 213 Query 119 --------------------LISLE----------ILFAIVAYTIIIVLILPLVIFAYAI 148 L++ E + FA V + + + +++PL+ FA + Sbjct 214 ELIMKSAEAWAVGFVELITGLVNFEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVL 273 Query 149 VFAVLAIIFGPPLLVIASPFVLTGSVIAVPTSLSTSLSTAVPIGVGQYLADLASADAQAI 208 A+L+I + +I++ F G++ + L +L+ AV GV A A+ Sbjct 274 ELAILSIGW-----IISNIF---GAIPVLAGPLLGALAAAVVPGVAGVTGLAGLAAVPAV 325 Query 209 EVGLKTADVAPVAVRPAAAPPLRESAAVRPEARLVSAVAPAPAGTSASVLASDRGAGVLG 268 +V P + V P+ARLVSAV PAPA TS SVLASDRGAG LG Sbjct 326 GAAAGAPAALVGSVAPVS------GGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALG 379 Query 269 FAGTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASW-EQLVG-AGEAG 315 F GTAGKESVG+PAGLT LA EFG VPM+P SW LVG AG+ G Sbjct 380 FVGTAGKESVGQPAGLTVLA-DEFGDGAPVPMLPGSWGPDLVGVAGDGG 427 >gi|339295856|gb|AEJ47967.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] Length=358 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 151/349 (44%), Positives = 191/349 (55%), Gaps = 55/349 (15%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALA MPTL ELAANH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 23 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 82 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASI--IGIIIEILIQLF---- 118 AAL + P T PAPV+ GA AS A++AAT+ P + +E+ Q F Sbjct 83 VVGAALVATPHTGPAPVIVKPGANEASN--AVAAATITPFPFGELAKFLEMAAQAFTEVG 140 Query 119 --------------------LISLE----------ILFAIVAYTIIIVLILPLVIFAYAI 148 L++ E + FA V + + + +++PL+ FA + Sbjct 141 ELIMKSAEAWAVGFVELITGLVNFEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVL 200 Query 149 VFAVLAIIFGPPLLVIASPFVLTGSVIAVPTSLSTSLSTAVPIGVGQYLADLASADAQAI 208 A+L+I + +I++ F G++ + L +L+ AV GV A A+ Sbjct 201 ELAILSIGW-----IISNIF---GAIPVLAGPLLGALAAAVVPGVAGVTGLAGLAAVPAV 252 Query 209 EVGLKTADVAPVAVRPAAAPPLRESAAVRPEARLVSAVAPAPAGTSASVLASDRGAGVLG 268 +V P + V P+ARLVSAV PAPA TS SVLASDRGAG LG Sbjct 253 GAAAGAPAALVGSVAPVS------GGVVSPQARLVSAVEPAPASTSVSVLASDRGAGALG 306 Query 269 FAGTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASW-EQLVG-AGEAG 315 F GTAGKESVG+PAGLT LA EFG VPM+P W LVG AG+ G Sbjct 307 FVGTAGKESVGQPAGLTVLA-DEFGDGAPVPMLPGGWGPDLVGVAGDGG 354 >gi|340628014|ref|YP_004746466.1| ppe family protein [Mycobacterium canettii CIPT 140010059] gi|340006204|emb|CCC45378.1| ppe family protein [Mycobacterium canettii CIPT 140010059] Length=434 Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 151/349 (44%), Positives = 192/349 (56%), Gaps = 56/349 (16%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALAAMPTL ELA NH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 100 YVCALAAMPTLPELAVNHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATAMSAYEA 159 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASI--IGIIIEILIQLF---- 118 AAL + P T PAP++ GA AS A++AAT+ P + +E+ Q F Sbjct 160 VVGAALVATPHTGPAPIIVKPGANEASN--AVAAATITPFPFGELAKFLEMAAQAFTEVG 217 Query 119 --------------------LISLE----------ILFAIVAYTIIIVLILPLVIFAYAI 148 L++ E + FA V + + + +++PL+ FA + Sbjct 218 ELIMKSAEAWAVGFVELITGLVNFEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVL 277 Query 149 VFAVLAIIFGPPLLVIASPFVLTGSVIAVPTSLSTSLSTAVPIGVGQYLADLASADAQAI 208 A+L+I + +I++ F G++ + L +L+ AV GV + LA A Sbjct 278 ELAILSIGW-----IISNIF---GAIPVLAGPLLGALAAAVVPGVAG-VTGLAGLAAVPA 328 Query 209 EVGLKTADVAPVAVRPAAAPPLRESAAVRPEARLVSAVAPAPAGTSASVLASDRGAGVLG 268 +V P + V P+ARLVSAV PA A TS SVLASDRGAG LG Sbjct 329 VGAAAAPAALVGSVAPVS------GGVVSPQARLVSAVEPAAASTSGSVLASDRGAGALG 382 Query 269 FAGTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASW-EQLVG-AGEAG 315 F GTAGKESVG+PAGLT LA EFG VPM+P SW LVG AG+ G Sbjct 383 FVGTAGKESVGQPAGLTVLA-DEFGDGARVPMLPGSWGPDLVGVAGDGG 430 >gi|183980812|ref|YP_001849103.1| PPE family protein [Mycobacterium marinum M] gi|183174138|gb|ACC39248.1| PPE family protein [Mycobacterium marinum M] Length=412 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 143/313 (46%), Positives = 186/313 (60%), Gaps = 21/313 (6%) Query 4 AYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYE 63 AY SALAAMPTL EL ANHT+H L+ TNFFG+NTIPI LNEADYARMW+QAATTMS Y+ Sbjct 99 AYTSALAAMPTLAELTANHTTHTALVATNFFGLNTIPITLNEADYARMWVQAATTMSAYQ 158 Query 64 GTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLISLE 123 S LAS P TTPAP + N G A+ + A A P II II+ ILI L I+ Sbjct 159 VVSGTTLASMPHTTPAPPILNTQIGTATNVAAPLLA--QPLDIIEIILAILINLIAITFF 216 Query 124 ILFAIVAYT---------IIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFVLTGSV 174 ++FAI+AYT I+I L +V+FA+ I A++ + LL P L S+ Sbjct 217 LVFAIIAYTIIFAILLIPILIALAFSVVVFAFYIAIAIIIVTPP--LLAALLPVALVSSL 274 Query 175 IAVPTSLSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAPPLRESA 234 I +P +L+T+L A+P+G+GQYLAD + ++++ +TA AAA + Sbjct 275 IGIPIALATTLPIALPVGIGQYLADQTRLETESVDQRQETA-----GTELAAAEDNWQLG 329 Query 235 AVRPEARLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGG 294 + P+A L S PAP +AS++ A +GFAGTA V PAGLT L GE G Sbjct 330 GM-PDAGLASTTTPAPTIGKVPEVASEQNA--MGFAGTAVNRPVQSPAGLTILGNGESGH 386 Query 295 SPSVPMVPASWEQ 307 VPM+PA+WE Sbjct 387 GSRVPMLPAAWEH 399 >gi|183983621|ref|YP_001851912.1| PPE family protein [Mycobacterium marinum M] gi|183176947|gb|ACC42057.1| PPE family protein [Mycobacterium marinum M] Length=453 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 135/349 (39%), Positives = 177/349 (51%), Gaps = 53/349 (15%) Query 4 AYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYE 63 AY SALA MPTL ELA NHT+H L+ TNFFG+NTIPI LNEADYARMWIQAATTMS Y+ Sbjct 98 AYTSALATMPTLAELAVNHTTHTALVATNFFGLNTIPITLNEADYARMWIQAATTMSAYQ 157 Query 64 GTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPA---------SIIGIIIEIL 114 S LAS P TTPAP + G + A+S A L PA +II I ++ Sbjct 158 VISGTTLASMPHTTPAPPVLKAEIGTLAG--ALSDA-LVPAPLFLWETILAIIAFIAKLA 214 Query 115 IQLFLISLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFG---------------- 158 ++L E++ ++A ++ L+ + A+ +V+A+ ++ Sbjct 215 EFIYLFVSELIALLIAGELLQALMFVIGTVAF-VVWALATVVIENIIPIMIALLAAAIAP 273 Query 159 -PPLLVIA--SPF-VLTGSVIAVPTSLSTSLSTAVPIGVGQYLADLASADAQAIEV---- 210 P L +A SPF V T + T LS A I + Q L L S AQ V Sbjct 274 VPLALAVAASSPFAVATACAL---TGTERGLSAAFDIDIAQNLPFLLSLYAQPASVGVPP 330 Query 211 ---GLKTADVAPVAVRPAAAPPLRESAA----------VRPEARLVSAVAPAPAGTSASV 257 GL TA PVA A P S+A V PEARLV+ A T+A+ Sbjct 331 ADAGLATASAKPVAAHTGAKPLWDSSSAVASAGDGPPSVAPEARLVATSTLAHPNTTATT 390 Query 258 LASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASWE 306 +A + + GFAGT +S PAG+T L +F SP +PM+P SW+ Sbjct 391 VACQQDSKAPGFAGTLSAKSHASPAGVTVLESNDFSDSPRLPMLPNSWD 439 >gi|240169845|ref|ZP_04748504.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=430 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 131/326 (41%), Positives = 177/326 (55%), Gaps = 33/326 (10%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y SALA MPTL ELAANH +HAVL+ TNFFG+NTIPIALNEADY RMW+QAATTMS+YE Sbjct 100 YVSALATMPTLAELAANHATHAVLVATNFFGLNTIPIALNEADYVRMWVQAATTMSVYEM 159 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDP-----------------ASII 107 ++ A L+S P T+PAPV+ GA +A + A +AA DP S++ Sbjct 160 STAALLSSVPCTSPAPVIVKPGAAIAGNV-ARAAALPDPIDRLLNELLLLIVSEWFNSVL 218 Query 108 GIIIEILIQL----FLISLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLV 163 I L+ L F I + +VL+ ++ Y ++ + PL+V Sbjct 219 AIFESFLLILWGPEFFIKALWFLLTGHFGAALVLLENYLLIWYFFPLSLAWQVLTDPLIV 278 Query 164 IAS--PFVLTGSVIAVPTSLSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVA 221 + ++L G+ + +LSTS++ G+ A LA+AD+ + A V Sbjct 279 AGAILEWILGGAGFGLIPALSTSVAG----GMALSTATLAAADSSVAALTAAPAAGGAVG 334 Query 222 VRPAAAPPLRESAAVRPEARLVSAVAPAPA-GTSASVLASDRGAGVLGFAGTAGKESVGR 280 PL ++AV P+A LVSAV A G SASV A+D+GA V+GFAGT + Sbjct 335 TL----GPLAGASAVLPQAPLVSAVTTGGAPGISASVAAADQGAAVMGFAGTVPAGAAVP 390 Query 281 PAGLTTLAGGEFGGSPSVPMVPASWE 306 AGL T+ G E G VPM+P WE Sbjct 391 AAGLATIGGAESAGGARVPMLPTGWE 416 >gi|240168963|ref|ZP_04747622.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=443 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 130/337 (39%), Positives = 174/337 (52%), Gaps = 43/337 (12%) Query 12 MPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALA 71 MPTL ELAANH +HAVLL TNFFGINTIPIALNEADY RMWIQAATTMSIY+ + AA+A Sbjct 115 MPTLPELAANHATHAVLLATNFFGINTIPIALNEADYVRMWIQAATTMSIYDAVTAAAMA 174 Query 72 SAPQTTPAPVLFNGGAGVASAL--PAISAATLDPASIIGIIIEILIQLFLISLEILF--A 127 S P T PAP++ GAG+A + A A + +P I I+ +++ ++ EIL A Sbjct 175 SMPHTPPAPIIIKPGAGLAGEIVAGAAHAISYEPFPIWQILWDLIK---VVGTEILAVPA 231 Query 128 IVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIASPFV-LTGSVIAVPTSLSTSLS 186 + +T+++ P+V+ + L +I L + A ++ L + + T + L Sbjct 232 LAIFTLMMAFYTPIVL----LFVGYLLLIGNTHLALEALTYLELAWLTVGIETFATVFLP 287 Query 187 TAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPA----------------AAPPL 230 VG + S + +G+ + PVA A APP+ Sbjct 288 FVFGYEVGNLVIQWISQWIMGLNLGMLPTLLGPVAAATALPVSAAAANSSAVAGLVAPPV 347 Query 231 R-------ESAAVRPEARLVSAVAPAPAGTSAS----VLASDRGAGVLGFAGTAGKESVG 279 E +AV P+A+LVS A AG+ + V ASD GAG LGFAG A Sbjct 348 AGVAVSAVEPSAVLPQAQLVSV---ATAGSCSQAPVPVAASDHGAGALGFAGNAPSGGAA 404 Query 280 RPAGLTTLAGGEFGGSPSVPMVPASWE-QLVGAGEAG 315 AGL TL G E G P +PM+P W LVG G Sbjct 405 HAAGLATLGGNESGSGPQLPMLPNCWNASLVGLTNVG 441 >gi|240168498|ref|ZP_04747157.1| PPE family protein, PPE4 [Mycobacterium kansasii ATCC 12478] Length=420 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 134/316 (43%), Positives = 160/316 (51%), Gaps = 19/316 (6%) Query 3 TAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIY 62 TAY ALAAMPTL ELAANH HAVLL TNFFGINTIPIALNE DY RMWIQAAT MSIY Sbjct 98 TAYTGALAAMPTLPELAANHAVHAVLLATNFFGINTIPIALNEGDYLRMWIQAATAMSIY 157 Query 63 EGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLISL 122 D ALAS P TPAP L G G A AA S +G I LI L Sbjct 158 HAAVDTALASVPHATPAPPLVKPGVGSAG-----DAAATSVQSAVGDIPWNLIWALLK-- 210 Query 123 EILFAIVAYTIIIVLILPLVIFA-YAIVFAVLAIIFGPPL--LVIASPFVLT-GSVIAVP 178 E+ A +A+ + ++ L + ++ +L + P L+ P + G A Sbjct 211 EVAEAYLAFNVWVLKEDALFLQDPIGNLWQMLNAFWTNPFNALLQWGPMIFALGYTAAEG 270 Query 179 TSLSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTA--------DVAPVAVRPAAAPPL 230 + +T+L+T + G L L A AV + P Sbjct 271 GAPATTLATGLITGATSALLAALPPALVPAATALMNAAGLPVAAAPAVVGAVAAGSVTPE 330 Query 231 RESAAVRPEARLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGG 290 +AAV P RLVSAVA APA A + S RGA LGF GTAGKE+ G P GLT L Sbjct 331 LGTAAVPPPIRLVSAVATAPATAPAGLGYSARGAAALGFPGTAGKEAAGEPGGLTRLGDQ 390 Query 291 EFGGSPSVPMVPASWE 306 E G PM+PA+W+ Sbjct 391 ESGDVARAPMLPATWD 406 >gi|183984882|ref|YP_001853173.1| PPE family protein [Mycobacterium marinum M] gi|183178208|gb|ACC43318.1| PPE family protein [Mycobacterium marinum M] Length=402 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 117/332 (36%), Positives = 157/332 (48%), Gaps = 82/332 (24%) Query 12 MPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALA 71 MP+L ELAANHT HAVL TNFFG+NTIPIA+NE DY RMW+QAA M Y+ + L Sbjct 106 MPSLVELAANHTVHAVLSATNFFGVNTIPIAVNEMDYVRMWVQAAAVMGTYQMITQGELL 165 Query 72 SAPQTTPAP-VLFNGGAGVASAL-------------------------PAISAATLDPAS 105 +AP PAP +L GG A P+I+ + Sbjct 166 AAPNIAPAPWILVPGGEAAAVVGPAASAAAATPPLAALIALIVAAIETPSIATVLAALVA 225 Query 106 IIGIIIEILIQLFLISLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIA 165 I+ ++ ++ F L F ++ +I L +I Y + F + A Sbjct 226 IVAFPVQAVVFFFSTLLGQFF---SWIPVISLSYAQIIIGYFVGF------------LAA 270 Query 166 SPFVLTGSVIAVPTSLSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPA 225 +P + +G+ IAVP S VP+GVG++L D+ A+A EV Sbjct 271 APVLTSGAEIAVPVS--------VPLGVGRHLYDVQMANADLAEV--------------- 307 Query 226 AAPPLRESAAVRPEARLVS---AVAPAPAGTSASVLA---------SDRGAGVLGFAGTA 273 E A R LVS A+AP P S S +A SD+GAG GF TA Sbjct 308 ------ERVAERSREVLVSAHHAIAPQPLSDSVSTVASVDVPAVAPSDQGAGPWGFVSTA 361 Query 274 GKESVGRPAGLTTLAGGEFGGSPSVPMVPASW 305 K V +P+GLTTLAG E G P++PM+PA+W Sbjct 362 SKGIVAQPSGLTTLAGAEVGDGPAMPMLPATW 393 >gi|118616333|ref|YP_904665.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118568443|gb|ABL03194.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=402 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 117/332 (36%), Positives = 157/332 (48%), Gaps = 82/332 (24%) Query 12 MPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALA 71 MP+L ELAANHT HAVL TNFFG+NTIPIA+NE DY RMW+QAA M Y+ + L Sbjct 106 MPSLVELAANHTVHAVLSATNFFGVNTIPIAVNEMDYVRMWVQAAAVMGTYQMITQGELL 165 Query 72 SAPQTTPAP-VLFNGGAGVASAL-------------------------PAISAATLDPAS 105 +AP PAP +L GG A P+I+ + Sbjct 166 AAPNIAPAPWILVLGGEAAAVVGLAASAAAATPPLAALIALIVAAIETPSIATVLAALVA 225 Query 106 IIGIIIEILIQLFLISLEILFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLVIA 165 I+ ++ ++ F L F ++ +I L +I Y + F + A Sbjct 226 IVAFPVQAVVFFFSTLLGQFF---SWIPVISLSYAQIIIGYFVGF------------LAA 270 Query 166 SPFVLTGSVIAVPTSLSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPA 225 +P + +G+ IAVP S VP+GVG++L D+ A+A EV Sbjct 271 APVLTSGAEIAVPVS--------VPLGVGRHLYDVQMANADVAEV--------------- 307 Query 226 AAPPLRESAAVRPEARLVS---AVAPAPAGTSASVLA---------SDRGAGVLGFAGTA 273 E A R LVS A+AP P S S +A SD+GAG GF TA Sbjct 308 ------ERVAERSREVLVSAHHAIAPQPLSDSVSTVASVDVPAVAPSDQGAGPWGFVSTA 361 Query 274 GKESVGRPAGLTTLAGGEFGGSPSVPMVPASW 305 K V +P+GLTTLAG E G P++PM+PA+W Sbjct 362 SKGIVAQPSGLTTLAGAEVGDGPAMPMLPATW 393 >gi|183982660|ref|YP_001850951.1| PPE family protein [Mycobacterium marinum M] gi|183175986|gb|ACC41096.1| PPE family protein [Mycobacterium marinum M] Length=428 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 128/348 (37%), Positives = 177/348 (51%), Gaps = 55/348 (15%) Query 3 TAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIY 62 TAY SALAAMPTLTELAANHT+HAVLLGTNFFGINTIPIALNEADY RMW+QAATTM +Y Sbjct 98 TAYISALAAMPTLTELAANHTTHAVLLGTNFFGINTIPIALNEADYVRMWVQAATTMGVY 157 Query 63 EGTSDAALASAPQTTPAPVLFN----GGAGVASALPAISAATLDPASIIGIIIEILIQLF 118 + S AL SAP +PAPV+ G AG A + A+ A + SI I+ +L+ ++ Sbjct 158 DAISAVALGSAPHNSPAPVILKDREMGPAGSAGSTAALGGAEVI-GSIWSWIVGMLVWVW 216 Query 119 LISLEILF-AIVAYTIIIVLILP-----------------------LVIFAYAIVFAVLA 154 LE+ + I + +P L + ++ AV+A Sbjct 217 QGILEVAYLGITVAFLFWEFFIPLLLSLLQGLLGLIGGLLSAIGGFLADWVPFLLGAVVA 276 Query 155 IIFGPPLLVIASPFVLTGSVIAVPTSL----STSLSTAVPIGVGQYL--ADLASADAQAI 208 +++ PL A+ ++ GS VP L + +L A+P+G+G Y+ D ++ D Sbjct 277 LLWNYPL---ATLLLVLGSSALVPLGLGAAAAITLPVALPLGIGGYVNYRDQSAPDFSGA 333 Query 209 EVGLKTADVAPVAVRPAAAPPLRESAAVRPEARLVSAVA-PAPAGTSASVLASDRG-AGV 266 E T + + PL +A ++ + V AP A V R A V Sbjct 334 ESDTGTDRI--------TSHPLDSDSATTDDSVDANPVEMMAPRHIPAEVAQPSREVATV 385 Query 267 LGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASW-EQLVGAGE 313 GFA TAG + G +T + +PMVP++W VGAG+ Sbjct 386 AGFADTAGSPATASARGWSTST------ASGIPMVPSTWATSAVGAGQ 427 >gi|183984239|ref|YP_001852530.1| PPE family protein [Mycobacterium marinum M] gi|183177565|gb|ACC42675.1| PPE family protein [Mycobacterium marinum M] Length=452 Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 139/357 (39%), Positives = 181/357 (51%), Gaps = 60/357 (16%) Query 4 AYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYE 63 AY SALA MPTL ELA NHT+H L+ TNFFG+NTIPI LNEADYARMWIQAATTMS Y+ Sbjct 98 AYTSALATMPTLAELAVNHTTHTALVATNFFGLNTIPITLNEADYARMWIQAATTMSAYQ 157 Query 64 GTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLISLE 123 S LAS P TTPAP + N G SAL AAT P I+ + E ++ L + E Sbjct 158 VVSGTTLASMPHTTPAPPILNTQIGTTSAL----AATGQPG-ILSLFWEGILLLLQVPGE 212 Query 124 -------------ILFAIVAYTIIIVLILPLV------------IFAYAIVFAV-LAIIF 157 ++ A++A I +L + LV I A+ I ++ LA++ Sbjct 213 LLALLLAGQFLPALVLALIAVGAIFLLPIALVLDILTAFPILVQILAWLIALSIALAVLL 272 Query 158 GPPLLVIAS---------PFVLTGSVIAVPTSLSTS---LSTAVPIGVGQYLADLASADA 205 P + V+A+ VL S IA +L+ + LS A I + + L L S A Sbjct 273 SPLIAVLAALSAVLAPPVSAVLLASGIATAVALTGTERGLSAAFDIDIARNLPLLPSLYA 332 Query 206 QAIEV-------GLKTADVAPVAVRPAAAPPLRESAAVRP----------EARLVSAVAP 248 Q V GL TA APVA A A +S+A+ P E L SA A Sbjct 333 QPATVATGPANAGLATASAAPVAAHTATASSANQSSAMEPTGNRPPGTMSETLLTSAPAA 392 Query 249 APAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASW 305 A A+ + + A LGFAGT+ ES+ PAG+ L GG P +P++P +W Sbjct 393 ASPSPVAAAMFGEHQARTLGFAGTSHTESLQSPAGIAVLESSYPGGGPQLPLLPTTW 449 >gi|118618500|ref|YP_906832.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118570610|gb|ABL05361.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=428 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 126/348 (37%), Positives = 177/348 (51%), Gaps = 55/348 (15%) Query 3 TAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIY 62 TAY SALAAMPTLTELAANHT+HAVLLGTNFFGINTIPIALNEADY RMW+QAATTM +Y Sbjct 98 TAYISALAAMPTLTELAANHTTHAVLLGTNFFGINTIPIALNEADYVRMWVQAATTMGVY 157 Query 63 EGTSDAALASAPQTTPAPVLFN----GGAGVASALPAISAATLDPASIIGIIIEILIQLF 118 + S AL SAP +PAPV+ G AG A + A+ A + SI I+ +L+ ++ Sbjct 158 DAISAVALGSAPHNSPAPVILKDREMGPAGSAGSTAALGGAEVI-GSIWSWIVGMLVWVW 216 Query 119 LISLEILF-AIVAYTIIIVLILP-----------------------LVIFAYAIVFAVLA 154 LE+ + + + +P L + ++ AV+A Sbjct 217 QGILEVAYLGVTVAFLFWEFFIPLLLSLLQGLLGLIGGLLSAIGGFLADWVPFLLGAVVA 276 Query 155 IIFGPPLLVIASPFVLTGSVIAVPTSL----STSLSTAVPIGVGQYL--ADLASADAQAI 208 +++ PL A+ ++ GS VP L + +L A+P+G+G Y+ + ++ D Sbjct 277 LLWNYPL---ATLLLVLGSSALVPLGLGAAATITLPVALPLGIGGYVNYREQSAPDFSGA 333 Query 209 EVGLKTADVAPVAVRPAAAPPLRESAAVRPEARLVSAVA-PAPAGTSASVLASDRG-AGV 266 E T + + PL +A ++ + V AP A V R A V Sbjct 334 ESDTGTDRI--------TSHPLDSDSATTDDSVDANPVEMMAPRHIPAEVAQPSREVATV 385 Query 267 LGFAGTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASW-EQLVGAGE 313 GFA TAG + G +T + +PMVP++W VGAG+ Sbjct 386 AGFADTAGSPATASARGWSTST------ASGIPMVPSTWATSAVGAGQ 427 >gi|183982899|ref|YP_001851190.1| PPE family protein [Mycobacterium marinum M] gi|183176225|gb|ACC41335.1| PPE family protein [Mycobacterium marinum M] Length=399 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 119/317 (38%), Positives = 157/317 (50%), Gaps = 38/317 (11%) Query 4 AYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYE 63 AY LA PT EL AN T VL+ TNFFGINTIPIA+NEA YA WI+ A M Y Sbjct 101 AYELTLATTPTSAELIANRTLRGVLIATNFFGINTIPIAVNEAWYAAQWIRTALAMIAYG 160 Query 64 GTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLISLE 123 DAA+ S P TPAP+L +A A ++ GII +L LF I Sbjct 161 AACDAAVLSTPPNTPAPMLL-APGAGEAAAAVGGAEAAAVGTLGGIITVLLTALFNIIWR 219 Query 124 ILFAIVAYTII--------IVLILPLVIFA-----YAIVFAVLAIIFGPPLLVIASPFVL 170 I AI++ I I+L + + +FA Y F+ + I P LV A L Sbjct 220 IFEAIISIVIAAFALSLSGIILAIQVALFAIYVEVYIAFFSFIGFIIANPWLVPAGLLAL 279 Query 171 TGSVIAVPTSLSTSLS--TAVPIGVGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAP 228 A+ ++T+++ +VP+GV D DA+ E K +D A R A+ Sbjct 280 LALPPALALEVATAIAVPVSVPLGV-----DRVVHDARLAEEDTKASD-RESARRSVASS 333 Query 229 PLRESAAVRPEARLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLA 288 +RE A+ P A+V SDRGA +GF+G AGKE++ RP GL TLA Sbjct 334 LVREVHALSP----------------AAVEVSDRGAESMGFSGAAGKETLPRPGGLITLA 377 Query 289 GGEFGGSPSVPMVPASW 305 G + G P VPM+PA+W Sbjct 378 GDQCDGDPRVPMLPATW 394 >gi|183983369|ref|YP_001851660.1| PPE family protein [Mycobacterium marinum M] gi|183176695|gb|ACC41805.1| PPE family protein [Mycobacterium marinum M] Length=397 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 121/334 (37%), Positives = 165/334 (50%), Gaps = 69/334 (20%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y SALA MPTL ELA NHT+H L+ TNFFG+NTIPI LNEADYARMW+QAATTMS Y+ Sbjct 99 YTSALATMPTLAELAVNHTTHTALVATNFFGLNTIPITLNEADYARMWVQAATTMSAYQV 158 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLISLEI 124 S LAS P TTP P + N G AT P +G L+ FLI+LE+ Sbjct 159 VSGTTLASMPHTTPVPPILNTQNG----------ATPTPLKPVG---PGLLSRFLIALEV 205 Query 125 LF--------AIVAYTIII---VLILPLVIFAYAIVFAVLAIIFGPPLLV------IASP 167 L+ AIV ++ V+++ LV+FA +F V I+ P+L+ +A Sbjct 206 LWWAPGAFLEAIVTGQYLLAAGVVLIALVVFALLPLFLVTDILAAFPILIPILIGLMALA 265 Query 168 FVLTGSVIAVPTSLSTSLSTAVPI---GVGQYLADLASAD-AQAIEVGLKTADVAPVAVR 223 + ++ + L S AVP+ GV + L+ + + D AQ + + L + Sbjct 266 AAFGALLASLASVLGPVASIAVPVALAGVERGLSAVFNIDIAQNLPLLLG------FYAQ 319 Query 224 PAAAPPLRESAAVRPEARLVSAVAPAPAGTS------------ASVLASDRGAGVLGFAG 271 PA P + PA AG S A+ + + A + GF G Sbjct 320 PATLP-----------------IPPADAGLSTATPAPAPPNPIATAMVGEHHARIPGFPG 362 Query 272 TAGKESVGRPAGLTTLAGGEFGGSPSVPMVPASW 305 T ES+ PAG+ L GG P +PM+PA+W Sbjct 363 TVHAESLQFPAGVGVLEPSHLGGGPQLPMLPATW 396 >gi|240171575|ref|ZP_04750234.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=425 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 130/334 (39%), Positives = 171/334 (52%), Gaps = 54/334 (16%) Query 11 AMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAAL 70 +MPT+ ELAANH +HA+L+ TNFFGINTIPI LNEADY RMWIQAATTMS+YEG S AAL Sbjct 106 SMPTMGELAANHATHALLVTTNFFGINTIPITLNEADYVRMWIQAATTMSVYEGFSAAAL 165 Query 71 ASAPQTTPAPVLFNGGAGVASALPAISAAT-LDP----ASIIGIIIEILIQ--------L 117 ASAP PAPV+ G AS + AI DP + + G++ +LI+ L Sbjct 166 ASAPHAPPAPVIIKSRTGEASNIAAIGQELGYDPFPLWSLLWGLVETMLIEIIGVPFFTL 225 Query 118 FLISLEILFAIVAYTIIIVLILPLVIFAYAIV---------FAVLAIIFGPPLLVIASPF 168 F+IS+ IL + + ++ +L FA I+ AV+A+ F + PF Sbjct 226 FVISVIILSPLWLFAFVLAELLGYSAFAANILQYLSLTWFAIAVMALAF------MMMPF 279 Query 169 VL----TGSVIAVPTSLSTSL--STAVPIGVGQYLADLA----------SADAQAIEVGL 212 VL +VI T LS + + A P+ L+ SA A G Sbjct 280 VLGYDIANAVIYWITHLSAGIVSTLASPLAAETALSASVAAAATNASTMSAAVAAPVTGA 339 Query 213 KTADVAPVAVRPA--AAPPLRESAAVRPEARLVSAVAPAPAGTSASVLASDRGAGVLGFA 270 V P+ V A AA P+ ++ P + PA +A++RG G GFA Sbjct 340 AVGGVEPLTVMSASSAATPMASASGGSPGHHISGIAEPA--------MATERGVGTPGFA 391 Query 271 GTAGKESVGRPAGLTTLAGGEFGGSPSVPMVPAS 304 GT K V + AGL T+ GGE G P VPM+PA Sbjct 392 GTVSKGVVAQAAGLATVGGGELGEPPRVPMLPAC 425 >gi|240171402|ref|ZP_04750061.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=442 Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 116/324 (36%), Positives = 160/324 (50%), Gaps = 52/324 (16%) Query 12 MPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALA 71 MPTL ELAANH +HAVLL TNFFG+N IPIA NEADYARMW+QAAT M++YE TS A+A Sbjct 134 MPTLGELAANHATHAVLLATNFFGVNAIPIAFNEADYARMWMQAATIMNVYETTSSPAVA 193 Query 72 SAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLISLEILFAIVAY 131 S P T PAP + GAG+ +A+ T+ P I I++IL+ + L + + Sbjct 194 STPHTPPAPAIIKPGAGLVNAI----ETTITPFPIWQ-ILQILLDAVVGVLHCIRESLVA 248 Query 132 TIIIVLILPLVIFAYAIVFAVLAIIFGP------------PLLVIASPFVLT-GSVIAVP 178 T++ +L +PL ++ AV+A++ G L +I F L G + V Sbjct 249 TVLALLFIPL-----CVLLAVIALLTGHVAMAEQFLGFIVNLAIIPFQFFLEAGWIFIVG 303 Query 179 TSLSTSLSTAVPIG----------VGQYLADLASADAQAIEVGLKTADVAPVAVRPAAAP 228 + L A +G V Q A + A+ VG + + PA+ Sbjct 304 LADICELVIAWFLGNLGFVGGPGLVTQLATTTALSGGAALGVGALKGTTVALELAPAS-- 361 Query 229 PLRESAAVRPEARLV---SAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLT 285 + AV + L SAV+PA G G +GFAGT +V + GLT Sbjct 362 --FAAMAVGADGSLATAGSAVSPAELG------------GPVGFAGTITNGTVPQAGGLT 407 Query 286 TLAGGEFGGSPSVPMVPASWEQLV 309 TL+G VPM+P+ W Q V Sbjct 408 TLSGHTCCDGVQVPMLPSGWAQHV 431 >gi|240171810|ref|ZP_04750469.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=421 Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 130/331 (40%), Positives = 180/331 (55%), Gaps = 35/331 (10%) Query 1 MTTAYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMS 60 + TAY A+AAMPTL+ELAANH +HAVL+ TNFFGINTIPIAL EADY RMWIQAATTM Sbjct 90 LATAYVCAVAAMPTLSELAANHATHAVLVATNFFGINTIPIALTEADYVRMWIQAATTMG 149 Query 61 IYEGTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPA---------------- 104 +Y+ + A LA+AP T PAP++ N GA A A T P Sbjct 150 VYDAVATATLAAAPHTAPAPIIINPGANTEFAASIAQAVTETPIEELLIELLNLILAEYI 209 Query 105 SIIGIIIEILIQLFLISLEI-LFAIVAYTIIIVLILPLVIFAYAIVFAVLAIIFGPPLLV 163 +++ ++I IL+ L I L I L A++ + + +++ Y ++ ++ P Sbjct 210 NVLEMVIGILM-LPTIGLRIPLEALLDFLTLHFAAGFFMLWYYGFLWYHFVVM--PAWQF 266 Query 164 IASPFVLTGSVIAVPTSLSTSLSTAVPIGVGQYLAD-------LASADAQAIEVGLKTA- 215 + P ++ +VI L + LAD A+A + + +G TA Sbjct 267 VIDPLLVVDAVIE--WILGGGAGFGAVGAMASPLADAVALSATGAAAASAGVNLGGMTAM 324 Query 216 DVAPVAVRPAAAPPLRESAAVRPEARLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGK 275 VA VAV A PL ++AV+P+A + SA A ASV+A+D+GAGVLGFAGT Sbjct 325 PVADVAV--GALGPLAGASAVQPQALIASAAA---PAVPASVVAADQGAGVLGFAGTTSG 379 Query 276 ESVGRPAGLTTLAGGEFGGSPSVPMVPASWE 306 + GLTT+ GGE G VPM+P +W+ Sbjct 380 AAAVPAGGLTTVCGGELGAGARVPMLPTNWQ 410 >gi|240168396|ref|ZP_04747055.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=429 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 129/325 (40%), Positives = 179/325 (56%), Gaps = 29/325 (8%) Query 12 MPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALA 71 MPTL ELAANHT+HAVLL TNFFGINTIPIALNE DY RMWIQAA MS+Y+ S AALA Sbjct 107 MPTLGELAANHTTHAVLLATNFFGINTIPIALNEVDYVRMWIQAAAAMSVYDEVSAAALA 166 Query 72 SAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLISLEILFAIVAY 131 +AP PAPV+ G+ +A + I+ +I+E +I ++F + Sbjct 167 AAPHANPAPVILKPGSMAVAAAAQTALTPFPFLEILNLIVET-----IIGEAVMFVLFWA 221 Query 132 TIIIVLILPLVIFA---------YAIVFAVLAI-IFGPPLLVIASPF-------VLTGSV 174 + ++LI PL++ A Y + +LA+ I P ++ I F V V Sbjct 222 SAFVLLISPLLLVAAGAAVLLGDYTVAAYLLALPIAAPIIMAIMGTFFFLNPVLVFFQGV 281 Query 175 IAVPTSLSTSLSTAVPIGVGQYLADLA-SADAQAIEVGLKTADVAPV-AVRPAAAPPLRE 232 + + + +L+ A P + + LA A A + ++ A+VAPV AV A P+ Sbjct 282 MLIINWIIGNLALAGPALSTYFASGLAIPAAAASASAAVQLAEVAPVSAVAVDAVLPVAG 341 Query 233 SAAVRPEARLVSAVAPAPAGTSASVLASDRGAGVLGFAGTAGKESVGRPAGLTTLAGGEF 292 + AV +A+L SAV+ A +G S SV A ++ A +GFAGT G PA G E Sbjct 342 APAVVSQAQLASAVS-AQSGASVSVTAGNQAANGIGFAGTL-TNGAGMPATGLAAIGAEC 399 Query 293 GGSPSVPMVPASWEQ-LVGA-GEAG 315 GG+ +PM+PASWE +VGA G+ G Sbjct 400 GGA-QIPMLPASWEHGVVGALGDGG 423 >gi|183983368|ref|YP_001851659.1| PPE family protein [Mycobacterium marinum M] gi|183176694|gb|ACC41804.1| PPE family protein [Mycobacterium marinum M] Length=390 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 90/236 (39%), Positives = 137/236 (59%), Gaps = 30/236 (12%) Query 4 AYASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYE 63 AYA AL AMPTL ELAAN T+H L+ TNFFG+NT+PI +NEADYARMW+QAATTM Y+ Sbjct 98 AYAGALTAMPTLAELAANRTTHTALVATNFFGLNTVPITVNEADYARMWVQAATTMGAYQ 157 Query 64 GTSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDP--ASIIGI------IIEILI 115 S ALAS P TTPAP++ N + I+ DP ++++GI +++ ++ Sbjct 158 VISGTALASMPHTTPAPLILNAEPLILEPEIEIAKFIADPVGSAVMGIWEMFLLLLDNIV 217 Query 116 QL--------FLIS-LEILFAIVAYTIIIVLILPLVIFAYAIVFAVLA------IIFGPP 160 QL FLI+ L++++ + + +++V I+ FA+ +V A LA ++ G Sbjct 218 QLLVLIVAGQFLIAFLQLIWTLAIFVLLLVEIIK--EFAFFLVVAGLAALGAWHVLLGLE 275 Query 161 LLVIASPFVLTGSVIAVPTSLSTSLSTAVPIGVGQYLADLASADAQAIEVGLKTAD 216 L ++++P G+ + + + LS A I + Q L+ L S Q +G+ AD Sbjct 276 LCIVSAPL---GACVL--SCVERGLSAAFNIDIAQSLSFLPSLYGQPAPLGMLRAD 326 >gi|183984867|ref|YP_001853158.1| PPE family protein [Mycobacterium marinum M] gi|183178193|gb|ACC43303.1| PPE family protein [Mycobacterium marinum M] Length=355 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 78/197 (40%), Positives = 112/197 (57%), Gaps = 20/197 (10%) Query 12 MPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALA 71 MPTL EL AN T+HA L+ TNFFG+NTIPI LNE DYARMWIQAATTMS Y+ S LA Sbjct 106 MPTLAELTANRTTHAALVATNFFGLNTIPITLNEVDYARMWIQAATTMSAYQAVSGTTLA 165 Query 72 SAPQTTPAPVLFNGGAGVASALPAISAATLDPASIIGIIIEILIQLFLISLEI---LFAI 128 S P TTPAP++ + AT II +I+ +++ + S+ + L+ I Sbjct 166 SMPHTTPAPLILEAETS--------TPATAQKIDIIDLIMWLIMNILYYSIILGVYLYVI 217 Query 129 VAYTIIIVLILP---LVIFAYAIVFAV------LAIIFGPPLLVIASPFVLTGSVIAVPT 179 V ++II+L+ L+++ Y I AV + GP LL+IA+ L+G++ V Sbjct 218 VYLSMIILLVFWHTFLMVYLYEIALAVGVLAAPALALAGPTLLLIATACALSGTLRGVSD 277 Query 180 SLSTSLSTAVPIGVGQY 196 + + + +P + Y Sbjct 278 AFNIDIGPNLPFLLSLY 294 >gi|240173310|ref|ZP_04751968.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=448 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 68/135 (51%), Positives = 86/135 (64%), Gaps = 8/135 (5%) Query 12 MPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEGTSDAALA 71 MPTL ELAANH +H VL+ TNFFGINTIPIALNEADY RMWIQAATTM +YE S AAL Sbjct 107 MPTLAELAANHVTHGVLVATNFFGINTIPIALNEADYVRMWIQAATTMGVYETVSGAALV 166 Query 72 SAPQTTPAPVLFNGGAGVASALPAISAATLD--PASIIGIIIEILIQLF------LISLE 123 S P TPAPVL G G A + A + TL P + + +E+ ++ + L++ Sbjct 167 STPHITPAPVLVKPGVGEAGSAAATAGQTLTPFPWNQLHQFLELFMKAWTQIGQLLVNAA 226 Query 124 ILFAIVAYTIIIVLI 138 F + +Y +I L+ Sbjct 227 FSFVLWSYNLIQALV 241 >gi|344220856|gb|AEN01487.1| PPE family protein [Mycobacterium tuberculosis CTRI-2] Length=375 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 80/187 (43%), Positives = 104/187 (56%), Gaps = 38/187 (20%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALA MPTL ELAANH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 100 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 159 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASI--IGIIIEILIQLF---- 118 AAL + P T PAPV+ GA AS A++AAT+ P + +E+ Q F Sbjct 160 VVGAALVATPHTGPAPVIVKPGANEASN--AVAAATITPFPFGELAKFLEMAAQAFTEVG 217 Query 119 --------------------LISLE----------ILFAIVAYTIIIVLILPLVIFAYAI 148 L++ E + FA V + + + +++PL+ FA + Sbjct 218 ELIMKSAEAWAVGFVELITGLVNFEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVL 277 Query 149 VFAVLAI 155 A+L+I Sbjct 278 ELAILSI 284 >gi|289448696|ref|ZP_06438440.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289421654|gb|EFD18855.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=327 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 80/187 (43%), Positives = 104/187 (56%), Gaps = 38/187 (20%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALA MPTL ELAANH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 52 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 111 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASI--IGIIIEILIQLF---- 118 AAL + P T PAPV+ GA AS A++AAT+ P + +E+ Q F Sbjct 112 VVGAALVATPHTGPAPVIVKPGANEASN--AVAAATITPFPFGELAKFLEMAAQAFTEVG 169 Query 119 --------------------LISLE----------ILFAIVAYTIIIVLILPLVIFAYAI 148 L++ E + FA V + + + +++PL+ FA + Sbjct 170 ELIMKSAEAWAVGFVELITGLVNFEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVL 229 Query 149 VFAVLAI 155 A+L+I Sbjct 230 ELAILSI 236 >gi|307081148|ref|ZP_07490318.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308361137|gb|EFP49988.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011] Length=290 Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 80/187 (43%), Positives = 104/187 (56%), Gaps = 38/187 (20%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALA MPTL ELAANH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 106 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 165 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDPASI--IGIIIEILIQLF---- 118 AAL + P T PAPV+ GA AS A++AAT+ P + +E+ Q F Sbjct 166 VVGAALVATPHTGPAPVIVKPGANEASN--AVAAATITPFPFGELAKFLEMAAQAFTEVG 223 Query 119 --------------------LISLE----------ILFAIVAYTIIIVLILPLVIFAYAI 148 L++ E + FA V + + + +++PL+ FA + Sbjct 224 ELIMKSAEAWAVGFVELITGLVNFEPWLVLTGMIDMFFATVGFALGVFVLVPLLEFAVVL 283 Query 149 VFAVLAI 155 A+L+I Sbjct 284 ELAILSI 290 >gi|306973438|ref|ZP_07486099.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308357185|gb|EFP46036.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010] Length=299 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 65/99 (66%), Positives = 73/99 (74%), Gaps = 2/99 (2%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALA MPTL ELAANH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 106 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 165 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDP 103 AAL + P T PAPV+ GA AS A++AAT+ P Sbjct 166 VVGAALVATPHTGPAPVIVKPGANEASN--AVAAATITP 202 >gi|306777323|ref|ZP_07415660.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308214316|gb|EFO73715.1| PPE family protein [Mycobacterium tuberculosis SUMu001] Length=283 Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 65/99 (66%), Positives = 73/99 (74%), Gaps = 2/99 (2%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALA MPTL ELAANH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 106 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 165 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDP 103 AAL + P T PAPV+ GA AS A++AAT+ P Sbjct 166 VVGAALVATPHTGPAPVIVKPGANEASN--AVAAATITP 202 >gi|298526488|ref|ZP_07013897.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A] gi|298496282|gb|EFI31576.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A] Length=360 Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 65/99 (66%), Positives = 73/99 (74%), Gaps = 2/99 (2%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALA MPTL ELAANH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 57 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 116 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDP 103 AAL + P T PAPV+ GA AS A++AAT+ P Sbjct 117 VVGAALVATPHTGPAPVIVKPGANEAS--NAVAAATITP 153 >gi|323718351|gb|EGB27527.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=298 Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 65/99 (66%), Positives = 73/99 (74%), Gaps = 2/99 (2%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALA MPTL ELAANH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 100 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 159 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDP 103 AAL + P T PAPV+ GA AS A++AAT+ P Sbjct 160 VVGAALVATPHTGPAPVIVKPGANEASN--AVAAATITP 196 >gi|344220853|gb|AEN01484.1| PPE family protein [Mycobacterium tuberculosis CTRI-2] Length=312 Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 65/99 (66%), Positives = 73/99 (74%), Gaps = 2/99 (2%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALA MPTL ELAANH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 100 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 159 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDP 103 AAL + P T PAPV+ GA AS A++AAT+ P Sbjct 160 VVGAALVATPHTGPAPVIVKPGANEASN--AVAAATITP 196 >gi|15842579|ref|NP_337616.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13882892|gb|AAK47430.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=310 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 65/99 (66%), Positives = 73/99 (74%), Gaps = 2/99 (2%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALA MPTL ELAANH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 100 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 159 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDP 103 AAL + P T PAPV+ GA AS A++AAT+ P Sbjct 160 VVGAALVATPHTGPAPVIVKPGANEASN--AVAAATITP 196 >gi|340628008|ref|YP_004746460.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340006198|emb|CCC45372.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=434 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 65/99 (66%), Positives = 73/99 (74%), Gaps = 2/99 (2%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALAAMPTL ELA NH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 100 YVCALAAMPTLPELAVNHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 159 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDP 103 AAL + P T PAPV+ GA AS A++AAT+ P Sbjct 160 VVGAALVATPHTGPAPVIVKPGANEASN--AVAAATITP 196 >gi|297732644|ref|ZP_06961762.1| PPE family protein [Mycobacterium tuberculosis KZN R506] Length=430 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 65/99 (66%), Positives = 73/99 (74%), Gaps = 2/99 (2%) Query 5 YASALAAMPTLTELAANHTSHAVLLGTNFFGINTIPIALNEADYARMWIQAATTMSIYEG 64 Y ALA MPTL ELAANH +HAVL+ TNFFGINTIPIALNEADY RMW+QAAT MS YE Sbjct 96 YVCALAEMPTLPELAANHLTHAVLVATNFFGINTIPIALNEADYVRMWVQAATVMSAYEA 155 Query 65 TSDAALASAPQTTPAPVLFNGGAGVASALPAISAATLDP 103 AAL + P T PAPV+ GA AS A++AAT+ P Sbjct 156 VVGAALVATPHTGPAPVIVKPGANEASN--AVAAATITP 192 Lambda K H 0.319 0.133 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 546119936736 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40