BLAST Search Results


BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3739c

Length=77
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|289748258|ref|ZP_06507636.1|  PPE family protein [Mycobacteriu...   147    5e-34
gi|340628712|ref|YP_004747164.1|  ppe family protein [Mycobacteri...   147    6e-34
gi|289445339|ref|ZP_06435083.1|  PPE family protein [Mycobacteriu...   145    2e-33
gi|57117151|ref|YP_178010.1|  PPE family protein [Mycobacterium t...   142    1e-32
gi|289441176|ref|ZP_06430920.1|  PPE family protein [Mycobacteriu...   142    1e-32
gi|289571984|ref|ZP_06452211.1|  LOW QUALITY PROTEIN: PPE family ...   142    2e-32
gi|336460204|gb|EGO39108.1|  PPE-repeat containing protein [Mycob...   115    2e-24
gi|41409863|ref|NP_962699.1|  hypothetical protein MAP3765 [Mycob...   115    2e-24
gi|183980566|ref|YP_001848857.1|  PPE family protein, PPE3 [Mycob...   115    2e-24
gi|296167571|ref|ZP_06849908.1|  PPE family protein [Mycobacteriu...   113    8e-24
gi|183981440|ref|YP_001849731.1|  PPE family protein [Mycobacteri...   112    1e-23
gi|240168498|ref|ZP_04747157.1|  PPE family protein, PPE4 [Mycoba...   112    2e-23
gi|41409823|ref|NP_962659.1|  hypothetical protein MAP3725 [Mycob...   111    5e-23
gi|254821574|ref|ZP_05226575.1|  PPE family protein [Mycobacteriu...   110    7e-23
gi|212596748|gb|ACJ35603.1|  PPE40 [Mycobacterium intracellulare ...   110    8e-23
gi|212596735|gb|ACJ35602.1|  PPE38 [Mycobacterium intracellulare ...   109    1e-22
gi|296165161|ref|ZP_06847709.1|  PPE family protein [Mycobacteriu...   109    2e-22
gi|296167589|ref|ZP_06849914.1|  PPE family protein [Mycobacteriu...   108    3e-22
gi|118616916|ref|YP_905248.1|  PPE family protein [Mycobacterium ...   107    5e-22
gi|240173310|ref|ZP_04751968.1|  PPE family protein [Mycobacteriu...   107    6e-22
gi|240171575|ref|ZP_04750234.1|  PPE family protein [Mycobacteriu...   107    8e-22
gi|183980519|ref|YP_001848810.1|  PPE family protein [Mycobacteri...   106    1e-21
gi|289748057|ref|ZP_06507435.1|  PPE family protein [Mycobacteriu...   106    1e-21
gi|289752319|ref|ZP_06511697.1|  PPE family protein [Mycobacteriu...   106    1e-21
gi|15839672|ref|NP_334709.1|  PPE family protein [Mycobacterium t...   106    1e-21
gi|339630361|ref|YP_004722003.1|  PPE family protein [Mycobacteri...   106    1e-21
gi|289756351|ref|ZP_06515729.1|  PPE family protein [Mycobacteriu...   106    1e-21
gi|340625324|ref|YP_004743776.1|  PPE family protein [Mycobacteri...   106    1e-21
gi|167967058|ref|ZP_02549335.1|  PPE family protein [Mycobacteriu...   106    1e-21
gi|323721322|gb|EGB30376.1|  PPE family protein [Mycobacterium tu...   106    1e-21
gi|306966289|ref|ZP_07478950.1|  putative PPE family protein [Myc...   106    1e-21
gi|306779127|ref|ZP_07417464.1|  PPE family protein [Mycobacteriu...   106    1e-21
gi|307078212|ref|ZP_07487382.1|  putative PPE family protein [Myc...   106    1e-21
gi|289748768|ref|ZP_06508146.1|  PPE family protein [Mycobacteriu...   106    1e-21
gi|298523757|ref|ZP_07011166.1|  ppe family protein [Mycobacteriu...   106    1e-21
gi|308395019|ref|ZP_07491878.2|  putative PPE family protein [Myc...   106    1e-21
gi|308376353|ref|ZP_07438549.2|  putative PPE family protein [Myc...   106    1e-21
gi|308375119|ref|ZP_07442759.2|  putative PPE family protein [Myc...   106    1e-21
gi|308370364|ref|ZP_07421235.2|  PPE family protein [Mycobacteriu...   106    1e-21
gi|296170714|ref|ZP_06852289.1|  PPE family protein [Mycobacteriu...   105    2e-21
gi|118616922|ref|YP_905254.1|  PPE family protein [Mycobacterium ...   105    3e-21
gi|118616872|ref|YP_905204.1|  PPE family protein [Mycobacterium ...   105    3e-21
gi|183980573|ref|YP_001848864.1|  PPE family protein, PPE4 [Mycob...   105    3e-21
gi|169627909|ref|YP_001701558.1|  PPE family protein [Mycobacteri...   105    3e-21
gi|254777313|ref|ZP_05218829.1|  PPE family protein [Mycobacteriu...   103    8e-21
gi|118465015|ref|YP_883994.1|  PPE family protein [Mycobacterium ...   103    8e-21
gi|212596224|gb|ACJ35561.1|  PPE38 [Mycobacterium avium subsp. av...   103    9e-21
gi|340628014|ref|YP_004746466.1|  ppe family protein [Mycobacteri...   103    1e-20
gi|31794199|ref|NP_856692.1|  PPE family protein [Mycobacterium b...   103    1e-20
gi|18202062|sp|O53268.2|PPE47_MYCTU  RecName: Full=Uncharacterize...   103    1e-20


>gi|289748258|ref|ZP_06507636.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289688845|gb|EFD56274.1| PPE family protein [Mycobacterium tuberculosis T92]
Length=410

 Score =  147 bits (371),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 77/77 (100%), Positives = 77/77 (100%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW
Sbjct  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           EGPSAEAYVAAHLPYLA
Sbjct  61  EGPSAEAYVAAHLPYLA  77


>gi|340628712|ref|YP_004747164.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
 gi|340006902|emb|CCC46091.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
Length=398

 Score =  147 bits (370),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 77/77 (100%), Positives = 77/77 (100%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW
Sbjct  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           EGPSAEAYVAAHLPYLA
Sbjct  61  EGPSAEAYVAAHLPYLA  77


>gi|289445339|ref|ZP_06435083.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289418297|gb|EFD15498.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length=410

 Score =  145 bits (365),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 76/77 (99%), Positives = 76/77 (99%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAPIWFASPPEVHSAL SAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW
Sbjct  1   MTAPIWFASPPEVHSALRSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           EGPSAEAYVAAHLPYLA
Sbjct  61  EGPSAEAYVAAHLPYLA  77


>gi|57117151|ref|YP_178010.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
 gi|148663605|ref|YP_001285128.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|148824944|ref|YP_001289698.1| PPE family protein [Mycobacterium tuberculosis F11]
 46 more sequence titles
 gi|167970897|ref|ZP_02553174.1| hypothetical protein MtubH3_23770 [Mycobacterium tuberculosis 
H37Ra]
 gi|253800786|ref|YP_003033787.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|254233232|ref|ZP_04926558.1| PPE family protein [Mycobacterium tuberculosis C]
 gi|254366284|ref|ZP_04982328.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
 gi|254552853|ref|ZP_05143300.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289556004|ref|ZP_06445214.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
 gi|289572390|ref|ZP_06452617.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|289747579|ref|ZP_06506957.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|289759901|ref|ZP_06519279.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|289763920|ref|ZP_06523298.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
 gi|294995348|ref|ZP_06801039.1| PPE family protein [Mycobacterium tuberculosis 210]
 gi|297636420|ref|ZP_06954200.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
 gi|297733414|ref|ZP_06962532.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
 gi|298527215|ref|ZP_07014624.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306778631|ref|ZP_07416968.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
 gi|306786653|ref|ZP_07424975.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
 gi|306801375|ref|ZP_07438043.1| PPE family protein [Mycobacterium tuberculosis SUMu008]
 gi|306805585|ref|ZP_07442253.1| PPE family protein [Mycobacterium tuberculosis SUMu007]
 gi|306969982|ref|ZP_07482643.1| PPE family protein [Mycobacterium tuberculosis SUMu009]
 gi|307081924|ref|ZP_07491094.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
 gi|313660745|ref|ZP_07817625.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
 gi|339633730|ref|YP_004725372.1| PPE family protein [Mycobacterium africanum GM041182]
 gi|7478747|pir||D70798 probable PPE protein - Mycobacterium tuberculosis (strain H37RV)
 gi|38490375|emb|CAE55635.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|124603025|gb|EAY61300.1| PPE family protein [Mycobacterium tuberculosis C]
 gi|134151796|gb|EBA43841.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
 gi|148507757|gb|ABQ75566.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
 gi|148723471|gb|ABR08096.1| PPE family protein [Mycobacterium tuberculosis F11]
 gi|253322289|gb|ACT26892.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289440636|gb|EFD23129.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
 gi|289536821|gb|EFD41399.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|289688107|gb|EFD55595.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|289711426|gb|EFD75442.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
 gi|289715465|gb|EFD79477.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|298497009|gb|EFI32303.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308328357|gb|EFP17208.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
 gi|308328760|gb|EFP17611.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
 gi|308347883|gb|EFP36734.1| PPE family protein [Mycobacterium tuberculosis SUMu007]
 gi|308351871|gb|EFP40722.1| PPE family protein [Mycobacterium tuberculosis SUMu008]
 gi|308352534|gb|EFP41385.1| PPE family protein [Mycobacterium tuberculosis SUMu009]
 gi|308360433|gb|EFP49284.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
 gi|323717603|gb|EGB26805.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
 gi|326905577|gb|EGE52510.1| PPE family protein [Mycobacterium tuberculosis W-148]
 gi|328460513|gb|AEB05936.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
 gi|339333086|emb|CCC28817.1| PPE family protein [Mycobacterium africanum GM041182]
 gi|344221577|gb|AEN02208.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
Length=77

 Score =  142 bits (359),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 77/77 (100%), Positives = 77/77 (100%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW
Sbjct  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           EGPSAEAYVAAHLPYLA
Sbjct  61  EGPSAEAYVAAHLPYLA  77


>gi|289441176|ref|ZP_06430920.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289414095|gb|EFD11335.1| PPE family protein [Mycobacterium tuberculosis T46]
Length=427

 Score =  142 bits (359),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 75/75 (100%), Positives = 75/75 (100%), Gaps = 0/75 (0%)

Query  3   APIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAWEG  62
           APIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAWEG
Sbjct  20  APIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAWEG  79

Query  63  PSAEAYVAAHLPYLA  77
           PSAEAYVAAHLPYLA
Sbjct  80  PSAEAYVAAHLPYLA  94


>gi|289571984|ref|ZP_06452211.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis 
T17]
 gi|289755870|ref|ZP_06515248.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis 
EAS054]
 gi|289545738|gb|EFD49386.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis 
T17]
 gi|289696457|gb|EFD63886.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis 
EAS054]
Length=78

 Score =  142 bits (357),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 77/77 (100%), Positives = 77/77 (100%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW
Sbjct  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           EGPSAEAYVAAHLPYLA
Sbjct  61  EGPSAEAYVAAHLPYLA  77


>gi|336460204|gb|EGO39108.1| PPE-repeat containing protein [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=538

 Score =  115 bits (288),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 61/77 (80%), Positives = 66/77 (86%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAPIW ASPPEVHSALLS+GPGP SL AAA  W SLSAEYAS A+EL+AVLA+ Q GAW
Sbjct  1   MTAPIWMASPPEVHSALLSSGPGPGSLLAAAGAWNSLSAEYASTAEELSAVLASAQAGAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
            GPSAE+YVAAH PYLA
Sbjct  61  GGPSAESYVAAHAPYLA  77


>gi|41409863|ref|NP_962699.1| hypothetical protein MAP3765 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398695|gb|AAS06315.1| hypothetical protein MAP_3765 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=538

 Score =  115 bits (288),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 61/77 (80%), Positives = 66/77 (86%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAPIW ASPPEVHSALLS+GPGP SL AAA  W SLSAEYAS A+EL+AVLA+ Q GAW
Sbjct  1   MTAPIWMASPPEVHSALLSSGPGPGSLLAAAGAWNSLSAEYASTAEELSAVLASAQAGAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
            GPSAE+YVAAH PYLA
Sbjct  61  GGPSAESYVAAHAPYLA  77


>gi|183980566|ref|YP_001848857.1| PPE family protein, PPE3 [Mycobacterium marinum M]
 gi|183173892|gb|ACC39002.1| PPE family protein, PPE3 [Mycobacterium marinum M]
Length=522

 Score =  115 bits (288),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 59/76 (78%), Positives = 63/76 (83%), Gaps = 0/76 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           M AP+WFASPPEVHSALLS+GPGPASL + AA W  LS EYAS A EL  VLAAVQGGAW
Sbjct  1   MVAPVWFASPPEVHSALLSSGPGPASLLSGAAAWAGLSTEYASVADELMGVLAAVQGGAW  60

Query  61  EGPSAEAYVAAHLPYL  76
           EG SAE YVAAH+PYL
Sbjct  61  EGLSAELYVAAHVPYL  76


>gi|296167571|ref|ZP_06849908.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897137|gb|EFG76747.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=354

 Score =  113 bits (283),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 60/77 (78%), Positives = 67/77 (88%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAPIW ASPPEVHSALLS+GPGPASL AAA  W+ LSAEYASAA +L+ VLAA Q G+W
Sbjct  1   MTAPIWMASPPEVHSALLSSGPGPASLLAAAGAWSELSAEYASAAAQLSGVLAAAQAGSW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE+YVAAH PYLA
Sbjct  61  QGPSAESYVAAHAPYLA  77


>gi|183981440|ref|YP_001849731.1| PPE family protein [Mycobacterium marinum M]
 gi|183174766|gb|ACC39876.1| PPE family protein [Mycobacterium marinum M]
Length=527

 Score =  112 bits (281),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 59/77 (77%), Positives = 64/77 (84%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAPIW ASPPEVHSALLS+GPGP  L +AAA W+ LS EYASAA ELTA+L AVQ G W
Sbjct  1   MTAPIWMASPPEVHSALLSSGPGPGPLLSAAAAWSQLSNEYASAANELTAMLGAVQAGPW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           EG SAE YVAAHLPY+A
Sbjct  61  EGSSAEQYVAAHLPYVA  77


>gi|240168498|ref|ZP_04747157.1| PPE family protein, PPE4 [Mycobacterium kansasii ATCC 12478]
Length=420

 Score =  112 bits (279),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 56/77 (73%), Positives = 64/77 (84%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAP+W ASPPEVHS+LLS+GPGP  L  AAA WTS+SAEYAS A+ELTA+L  VQ GAW
Sbjct  1   MTAPVWIASPPEVHSSLLSSGPGPGPLLVAAASWTSISAEYASVAEELTALLGGVQIGAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
            GPSAE + AAH+PYLA
Sbjct  61  RGPSAEVFAAAHVPYLA  77


>gi|41409823|ref|NP_962659.1| hypothetical protein MAP3725 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41398655|gb|AAS06275.1| hypothetical protein MAP_3725 [Mycobacterium avium subsp. paratuberculosis 
K-10]
Length=518

 Score =  111 bits (277),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 57/77 (75%), Positives = 64/77 (84%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAPIW A PPEVHSALLS+GPGP  L A+A  W SL+AEY SAA+ELTAV+  VQ GAW
Sbjct  1   MTAPIWMAFPPEVHSALLSSGPGPGPLLASAGAWNSLAAEYTSAAEELTAVVEGVQAGAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE+YVAAH PYLA
Sbjct  61  QGPSAESYVAAHAPYLA  77


>gi|254821574|ref|ZP_05226575.1| PPE family protein [Mycobacterium intracellulare ATCC 13950]
Length=294

 Score =  110 bits (275),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 58/77 (76%), Positives = 66/77 (86%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAPI+ ASPPEVHSALLS+GPGP  L AAA  W+ LSAEYASAA++L+ +LA VQ GAW
Sbjct  1   MTAPIFMASPPEVHSALLSSGPGPGPLLAAAGAWSELSAEYASAAEQLSTLLAGVQAGAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           EGPSAE+YVAAH PYLA
Sbjct  61  EGPSAESYVAAHAPYLA  77


>gi|212596748|gb|ACJ35603.1| PPE40 [Mycobacterium intracellulare ATCC 13950]
Length=327

 Score =  110 bits (275),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 58/77 (76%), Positives = 66/77 (86%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAPI+ ASPPEVHSALLS+GPGP  L AAA  W+ LSAEYASAA++L+ +LA VQ GAW
Sbjct  1   MTAPIFMASPPEVHSALLSSGPGPGPLLAAAGAWSELSAEYASAAEQLSTLLAGVQAGAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           EGPSAE+YVAAH PYLA
Sbjct  61  EGPSAESYVAAHAPYLA  77


>gi|212596735|gb|ACJ35602.1| PPE38 [Mycobacterium intracellulare ATCC 13950]
Length=141

 Score =  109 bits (273),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 59/75 (79%), Positives = 63/75 (84%), Gaps = 0/75 (0%)

Query  3   APIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAWEG  62
           APIW ASPPEVHSALLSAGPGP  L AAA  WTSLSA+YA+AA EL+A+L   Q GAWEG
Sbjct  6   APIWMASPPEVHSALLSAGPGPGPLLAAAGAWTSLSAQYATAAGELSALLGEAQAGAWEG  65

Query  63  PSAEAYVAAHLPYLA  77
           PSAE YVAAHLPYLA
Sbjct  66  PSAEQYVAAHLPYLA  80


>gi|296165161|ref|ZP_06847709.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899469|gb|EFG78927.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=307

 Score =  109 bits (272),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 56/77 (73%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAPIW A PPEVHS LLS+GPGP  L AAAA W+S+S +YA AA EL  +L AVQGGAW
Sbjct  1   MTAPIWIAFPPEVHSTLLSSGPGPGPLLAAAATWSSMSGQYAEAADELGGLLGAVQGGAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           EGP+AE YVAAH PYLA
Sbjct  61  EGPTAEQYVAAHAPYLA  77


>gi|296167589|ref|ZP_06849914.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897132|gb|EFG76743.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=311

 Score =  108 bits (270),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 55/77 (72%), Positives = 61/77 (80%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAP+W ASPPEVHS LLSAGPGP  L AAA  WTSLSAEYA+AA ELT VL   Q GAW
Sbjct  1   MTAPVWMASPPEVHSTLLSAGPGPGPLLAAAGAWTSLSAEYATAAAELTGVLGETQAGAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GP+   Y+AAH+PYLA
Sbjct  61  QGPTGAQYLAAHVPYLA  77


>gi|118616916|ref|YP_905248.1| PPE family protein [Mycobacterium ulcerans Agy99]
 gi|118569026|gb|ABL03777.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=518

 Score =  107 bits (268),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 55/72 (77%), Positives = 59/72 (82%), Gaps = 0/72 (0%)

Query  5   IWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAWEGPS  64
           +WF SPPEVHSALLS+GPGPASL + AA W  LS EYAS A EL  VLAAVQGGAWEG S
Sbjct  1   MWFTSPPEVHSALLSSGPGPASLLSGAAAWAGLSTEYASVADELMGVLAAVQGGAWEGLS  60

Query  65  AEAYVAAHLPYL  76
           AE YVAAH+PYL
Sbjct  61  AELYVAAHVPYL  72


>gi|240173310|ref|ZP_04751968.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=448

 Score =  107 bits (267),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 61/77 (80%), Positives = 68/77 (89%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAP+W ASPPEVHSALLSAG GPA L AA+A WTSLSAEYA AA+ELT +LAAVQ GAW
Sbjct  1   MTAPLWMASPPEVHSALLSAGAGPAPLLAASAAWTSLSAEYAGAAEELTLILAAVQAGAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPS EAYVAAH+PY+A
Sbjct  61  QGPSVEAYVAAHVPYVA  77


>gi|240171575|ref|ZP_04750234.1| PPE family protein [Mycobacterium kansasii ATCC 12478]
Length=425

 Score =  107 bits (266),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 56/77 (73%), Positives = 64/77 (84%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAPIWFASPPEVHSALLSAGPGP+SL AAAA W+SLSAEYAS A+EL+ VL A+Q  AW
Sbjct  1   MTAPIWFASPPEVHSALLSAGPGPSSLLAAAAGWSSLSAEYASVAEELSTVLGAIQAEAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
            GPS+   V A+ PY+A
Sbjct  61  RGPSSGICVGAYAPYVA  77


>gi|183980519|ref|YP_001848810.1| PPE family protein [Mycobacterium marinum M]
 gi|183173845|gb|ACC38955.1| PPE family protein [Mycobacterium marinum M]
Length=394

 Score =  106 bits (265),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 53/77 (69%), Positives = 63/77 (82%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAP+W AS PEVHSALLSAGPGP SL AAA  WT LSAEY + A+ELTA+L  VQ GAW
Sbjct  1   MTAPLWMASAPEVHSALLSAGPGPGSLLAAAQTWTELSAEYLAVAEELTAILTGVQAGAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSA+  +AA++PYL+
Sbjct  61  DGPSAQCCIAAYVPYLS  77


>gi|289748057|ref|ZP_06507435.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
 gi|289688585|gb|EFD56073.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length=368

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/77 (75%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           M APIW ASPPEVHSALLS GPGP SL AAA  W+ LSAEYAS A EL+ +L AV G AW
Sbjct  1   MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE YVAAHLPY+A
Sbjct  61  QGPSAEWYVAAHLPYVA  77


>gi|289752319|ref|ZP_06511697.1| PPE family protein [Mycobacterium tuberculosis EAS054]
 gi|289692906|gb|EFD60335.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length=513

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/77 (75%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           M APIW ASPPEVHSALLS GPGP SL AAA  W+ LSAEYAS A EL+ +L AV G AW
Sbjct  1   MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE YVAAHLPY+A
Sbjct  61  QGPSAEWYVAAHLPYVA  77


>gi|15839672|ref|NP_334709.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
 gi|31791465|ref|NP_853958.1| PPE family protein [Mycobacterium bovis AF2122/97]
 gi|57116716|ref|YP_177711.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
 44 more sequence titles
 gi|121636201|ref|YP_976424.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148821484|ref|YP_001286238.1| PPE family protein [Mycobacterium tuberculosis F11]
 gi|224988674|ref|YP_002643361.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253797213|ref|YP_003030214.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|254230660|ref|ZP_04923987.1| PPE family protein [Mycobacterium tuberculosis C]
 gi|254549232|ref|ZP_05139679.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289441666|ref|ZP_06431410.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289445825|ref|ZP_06435569.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289552542|ref|ZP_06441752.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
 gi|289568200|ref|ZP_06448427.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|289572871|ref|ZP_06453098.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|289760397|ref|ZP_06519775.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
 gi|294995044|ref|ZP_06800735.1| PPE family protein [Mycobacterium tuberculosis 210]
 gi|297632774|ref|ZP_06950554.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
 gi|297729749|ref|ZP_06958867.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
 gi|306774383|ref|ZP_07412720.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
 gi|306791836|ref|ZP_07430138.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
 gi|306795880|ref|ZP_07434182.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
 gi|308371636|ref|ZP_07425604.2| PPE family protein [Mycobacterium tuberculosis SUMu004]
 gi|308378595|ref|ZP_07483148.2| PPE family protein [Mycobacterium tuberculosis SUMu010]
 gi|81707019|sp|Q7DA35.1|PPE04_MYCTU RecName: Full=Uncharacterized PPE family protein PPE4
 gi|13879793|gb|AAK44523.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
 gi|31617051|emb|CAD93158.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
 gi|38490167|emb|CAE55266.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|121491848|emb|CAL70311.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599719|gb|EAY58729.1| PPE family protein [Mycobacterium tuberculosis C]
 gi|148720011|gb|ABR04636.1| PPE family protein [Mycobacterium tuberculosis F11]
 gi|224771787|dbj|BAH24593.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253318716|gb|ACT23319.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
 gi|289414585|gb|EFD11825.1| PPE family protein [Mycobacterium tuberculosis T46]
 gi|289418783|gb|EFD15984.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
 gi|289437174|gb|EFD19667.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
 gi|289537302|gb|EFD41880.1| PPE family protein [Mycobacterium tuberculosis K85]
 gi|289541953|gb|EFD45602.1| PPE family protein [Mycobacterium tuberculosis T17]
 gi|289707903|gb|EFD71919.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
 gi|308217029|gb|EFO76428.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
 gi|308336029|gb|EFP24880.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
 gi|308339633|gb|EFP28484.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
 gi|308343644|gb|EFP32495.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
 gi|308359937|gb|EFP48788.1| PPE family protein [Mycobacterium tuberculosis SUMu010]
 gi|326906041|gb|EGE52974.1| PPE family protein [Mycobacterium tuberculosis W-148]
 gi|328457001|gb|AEB02424.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
 gi|341600217|emb|CCC62887.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
 gi|344218107|gb|AEM98737.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
Length=513

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/77 (75%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           M APIW ASPPEVHSALLS GPGP SL AAA  W+ LSAEYAS A EL+ +L AV G AW
Sbjct  1   MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE YVAAHLPY+A
Sbjct  61  QGPSAEWYVAAHLPYVA  77


>gi|339630361|ref|YP_004722003.1| PPE family protein [Mycobacterium africanum GM041182]
 gi|339329717|emb|CCC25360.1| PPE family protein [Mycobacterium africanum GM041182]
Length=513

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/77 (75%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           M APIW ASPPEVHSALLS GPGP SL AAA  W+ LSAEYAS A EL+ +L AV G AW
Sbjct  1   MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE YVAAHLPY+A
Sbjct  61  QGPSAEWYVAAHLPYVA  77


>gi|289756351|ref|ZP_06515729.1| PPE family protein [Mycobacterium tuberculosis T85]
 gi|289711915|gb|EFD75927.1| PPE family protein [Mycobacterium tuberculosis T85]
Length=365

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/77 (75%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           M APIW ASPPEVHSALLS GPGP SL AAA  W+ LSAEYAS A EL+ +L AV G AW
Sbjct  1   MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE YVAAHLPY+A
Sbjct  61  QGPSAEWYVAAHLPYVA  77


>gi|340625324|ref|YP_004743776.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
 gi|340003514|emb|CCC42635.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length=513

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/77 (75%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           M APIW ASPPEVHSALLS GPGP SL AAA  W+ LSAEYAS A EL+ +L AV G AW
Sbjct  1   MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE YVAAHLPY+A
Sbjct  61  QGPSAEWYVAAHLPYVA  77


>gi|167967058|ref|ZP_02549335.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length=335

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/77 (75%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           M APIW ASPPEVHSALLS GPGP SL AAA  W+ LSAEYAS A EL+ +L AV G AW
Sbjct  1   MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE YVAAHLPY+A
Sbjct  61  QGPSAEWYVAAHLPYVA  77


>gi|323721322|gb|EGB30376.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length=348

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/77 (75%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           M APIW ASPPEVHSALLS GPGP SL AAA  W+ LSAEYAS A EL+ +L AV G AW
Sbjct  1   MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE YVAAHLPY+A
Sbjct  61  QGPSAEWYVAAHLPYVA  77


>gi|306966289|ref|ZP_07478950.1| putative PPE family protein [Mycobacterium tuberculosis SUMu009]
 gi|308355991|gb|EFP44842.1| putative PPE family protein [Mycobacterium tuberculosis SUMu009]
Length=325

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/77 (75%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           M APIW ASPPEVHSALLS GPGP SL AAA  W+ LSAEYAS A EL+ +L AV G AW
Sbjct  1   MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE YVAAHLPY+A
Sbjct  61  QGPSAEWYVAAHLPYVA  77


>gi|306779127|ref|ZP_07417464.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
 gi|308327904|gb|EFP16755.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
Length=339

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/77 (75%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           M APIW ASPPEVHSALLS GPGP SL AAA  W+ LSAEYAS A EL+ +L AV G AW
Sbjct  1   MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE YVAAHLPY+A
Sbjct  61  QGPSAEWYVAAHLPYVA  77


>gi|307078212|ref|ZP_07487382.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
 gi|308363847|gb|EFP52698.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
Length=342

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/77 (75%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           M APIW ASPPEVHSALLS GPGP SL AAA  W+ LSAEYAS A EL+ +L AV G AW
Sbjct  1   MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE YVAAHLPY+A
Sbjct  61  QGPSAEWYVAAHLPYVA  77


>gi|289748768|ref|ZP_06508146.1| PPE family protein [Mycobacterium tuberculosis T92]
 gi|289689355|gb|EFD56784.1| PPE family protein [Mycobacterium tuberculosis T92]
Length=342

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/77 (75%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           M APIW ASPPEVHSALLS GPGP SL AAA  W+ LSAEYAS A EL+ +L AV G AW
Sbjct  1   MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE YVAAHLPY+A
Sbjct  61  QGPSAEWYVAAHLPYVA  77


>gi|298523757|ref|ZP_07011166.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298493551|gb|EFI28845.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
Length=379

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/77 (75%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           M APIW ASPPEVHSALLS GPGP SL AAA  W+ LSAEYAS A EL+ +L AV G AW
Sbjct  1   MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE YVAAHLPY+A
Sbjct  61  QGPSAEWYVAAHLPYVA  77


>gi|308395019|ref|ZP_07491878.2| putative PPE family protein [Mycobacterium tuberculosis SUMu012]
 gi|308367517|gb|EFP56368.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012]
Length=311

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/77 (75%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           M APIW ASPPEVHSALLS GPGP SL AAA  W+ LSAEYAS A EL+ +L AV G AW
Sbjct  1   MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE YVAAHLPY+A
Sbjct  61  QGPSAEWYVAAHLPYVA  77


>gi|308376353|ref|ZP_07438549.2| putative PPE family protein [Mycobacterium tuberculosis SUMu008]
 gi|308351359|gb|EFP40210.1| putative PPE family protein [Mycobacterium tuberculosis SUMu008]
Length=332

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/77 (75%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           M APIW ASPPEVHSALLS GPGP SL AAA  W+ LSAEYAS A EL+ +L AV G AW
Sbjct  1   MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE YVAAHLPY+A
Sbjct  61  QGPSAEWYVAAHLPYVA  77


>gi|308375119|ref|ZP_07442759.2| putative PPE family protein [Mycobacterium tuberculosis SUMu007]
 gi|308347415|gb|EFP36266.1| putative PPE family protein [Mycobacterium tuberculosis SUMu007]
Length=322

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/77 (75%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           M APIW ASPPEVHSALLS GPGP SL AAA  W+ LSAEYAS A EL+ +L AV G AW
Sbjct  1   MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE YVAAHLPY+A
Sbjct  61  QGPSAEWYVAAHLPYVA  77


>gi|308370364|ref|ZP_07421235.2| PPE family protein [Mycobacterium tuberculosis SUMu003]
 gi|308332261|gb|EFP21112.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
Length=338

 Score =  106 bits (264),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/77 (75%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           M APIW ASPPEVHSALLS GPGP SL AAA  W+ LSAEYAS A EL+ +L AV G AW
Sbjct  1   MAAPIWMASPPEVHSALLSNGPGPGSLVAAATAWSQLSAEYASTAAELSGLLGAVPGWAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE YVAAHLPY+A
Sbjct  61  QGPSAEWYVAAHLPYVA  77


>gi|296170714|ref|ZP_06852289.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295894703|gb|EFG74437.1| PPE family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=303

 Score =  105 bits (263),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 56/77 (73%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MT PIW A PPEVHSA LS+GPGP SL AA   W +LSAEY +AAQEL  +LAAVQ G W
Sbjct  1   MTMPIWAAFPPEVHSAALSSGPGPGSLLAAEQAWQALSAEYDTAAQELGDLLAAVQAGTW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAEAYVAAH+PYLA
Sbjct  61  QGPSAEAYVAAHVPYLA  77


>gi|118616922|ref|YP_905254.1| PPE family protein [Mycobacterium ulcerans Agy99]
 gi|118569032|gb|ABL03783.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=517

 Score =  105 bits (261),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 55/75 (74%), Positives = 62/75 (83%), Gaps = 0/75 (0%)

Query  3   APIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAWEG  62
            PIW ASPPEVHSA+LS+GPGPASL AAA  W++LSAEYA  A EL+ VLAAVQ GAW+G
Sbjct  6   GPIWIASPPEVHSAMLSSGPGPASLLAAAGVWSALSAEYALTAAELSEVLAAVQAGAWQG  65

Query  63  PSAEAYVAAHLPYLA  77
           PS   YVAAHLPY+A
Sbjct  66  PSGFQYVAAHLPYVA  80


>gi|118616872|ref|YP_905204.1| PPE family protein [Mycobacterium ulcerans Agy99]
 gi|118568982|gb|ABL03733.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length=394

 Score =  105 bits (261),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 53/77 (69%), Positives = 62/77 (81%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAP+W AS PE HSALLSAGPGP SL AAA  WT LSAEY + A+ELTA+L  VQ GAW
Sbjct  1   MTAPLWMASAPEAHSALLSAGPGPGSLLAAAQTWTELSAEYLAVAEELTAILTGVQAGAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSA+  +AA+LPYL+
Sbjct  61  DGPSAQCCIAAYLPYLS  77


>gi|183980573|ref|YP_001848864.1| PPE family protein, PPE4 [Mycobacterium marinum M]
 gi|183173899|gb|ACC39009.1| PPE family protein, PPE4 [Mycobacterium marinum M]
Length=517

 Score =  105 bits (261),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 55/75 (74%), Positives = 62/75 (83%), Gaps = 0/75 (0%)

Query  3   APIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAWEG  62
            PIW ASPPEVHSA+LS+GPGPASL AAA  W++LSAEYA  A EL+ VLAAVQ GAW+G
Sbjct  6   GPIWIASPPEVHSAMLSSGPGPASLLAAAGVWSALSAEYALTAAELSEVLAAVQAGAWQG  65

Query  63  PSAEAYVAAHLPYLA  77
           PS   YVAAHLPY+A
Sbjct  66  PSGFQYVAAHLPYVA  80


>gi|169627909|ref|YP_001701558.1| PPE family protein [Mycobacterium abscessus ATCC 19977]
 gi|169239876|emb|CAM60904.1| Conserved hypothetical PPE family protein [Mycobacterium abscessus]
Length=494

 Score =  105 bits (261),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 53/76 (70%), Positives = 60/76 (79%), Gaps = 0/76 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           + AP+W ASPPEVHSALLS+GPGP  L AAAAEW+SL A Y++ AQEL A+LAA    AW
Sbjct  2   LAAPVWMASPPEVHSALLSSGPGPGPLLAAAAEWSSLGAHYSATAQELRAILAATHASAW  61

Query  61  EGPSAEAYVAAHLPYL  76
            GPSAE YVAAH PYL
Sbjct  62  HGPSAETYVAAHTPYL  77


>gi|254777313|ref|ZP_05218829.1| PPE family protein [Mycobacterium avium subsp. avium ATCC 25291]
 gi|212596850|gb|ACJ35611.1| PPE39 [Mycobacterium avium subsp. avium]
Length=488

 Score =  103 bits (257),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 56/77 (73%), Positives = 61/77 (80%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAP+W A  PEVHS LLS+GPGPA L +AAA WTSLS  YASAA EL+A LAA Q  AW
Sbjct  1   MTAPVWMAFAPEVHSTLLSSGPGPAGLLSAAASWTSLSETYASAAAELSATLAAAQSDAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE YVAAH PYLA
Sbjct  61  QGPSAERYVAAHAPYLA  77


>gi|118465015|ref|YP_883994.1| PPE family protein [Mycobacterium avium 104]
 gi|118166302|gb|ABK67199.1| ppe family protein [Mycobacterium avium 104]
Length=488

 Score =  103 bits (257),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 56/77 (73%), Positives = 61/77 (80%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAP+W A  PEVHS LLS+GPGPA L +AAA WTSLS  YASAA EL+A LAA Q  AW
Sbjct  1   MTAPVWMAFAPEVHSTLLSSGPGPAGLLSAAASWTSLSETYASAAAELSATLAAAQSDAW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE YVAAH PYLA
Sbjct  61  QGPSAERYVAAHAPYLA  77


>gi|212596224|gb|ACJ35561.1| PPE38 [Mycobacterium avium subsp. avium]
Length=493

 Score =  103 bits (257),  Expect = 9e-21, Method: Compositional matrix adjust.
 Identities = 55/75 (74%), Positives = 60/75 (80%), Gaps = 0/75 (0%)

Query  3   APIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAWEG  62
            PIW ASPPEVHSALLSAGPGP  L AAA  W SLSA+YA+AA EL+A+L  VQ G+WEG
Sbjct  6   GPIWMASPPEVHSALLSAGPGPGPLLAAAGAWASLSAQYATAAAELSALLGEVQAGSWEG  65

Query  63  PSAEAYVAAHLPYLA  77
            SAE Y AAHLPYLA
Sbjct  66  ESAEQYAAAHLPYLA  80


>gi|340628014|ref|YP_004746466.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
 gi|340006204|emb|CCC45378.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
Length=434

 Score =  103 bits (256),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 58/77 (76%), Positives = 69/77 (90%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAP+W ASPPEVHSALLSAGPGP SLQAAAA W++LSAEYA+ AQEL+AV+AAV  G W
Sbjct  1   MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSAVVAAVGAGVW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE +VAA++PY+A
Sbjct  61  QGPSAELFVAAYVPYVA  77


>gi|31794199|ref|NP_856692.1| PPE family protein [Mycobacterium bovis AF2122/97]
 gi|121638904|ref|YP_979128.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224991396|ref|YP_002646085.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
 7 more sequence titles
 gi|339633029|ref|YP_004724671.1| PPE family protein [Mycobacterium africanum GM041182]
 gi|31619794|emb|CAD96734.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121494552|emb|CAL73033.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224774511|dbj|BAH27317.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
 gi|339299469|gb|AEJ51579.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
 gi|339332385|emb|CCC28098.1| PPE family protein [Mycobacterium africanum GM041182]
 gi|341602943|emb|CCC65621.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=435

 Score =  103 bits (256),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 58/77 (76%), Positives = 69/77 (90%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAP+W ASPPEVHSALLSAGPGP SLQAAAA W++LSAEYA+ AQEL+AV+AAV  G W
Sbjct  1   MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSAVVAAVGAGVW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE +VAA++PY+A
Sbjct  61  QGPSAELFVAAYVPYVA  77


>gi|18202062|sp|O53268.2|PPE47_MYCTU RecName: Full=Uncharacterized PPE family protein PPE47/PPE48
Length=435

 Score =  103 bits (256),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 57/77 (75%), Positives = 68/77 (89%), Gaps = 0/77 (0%)

Query  1   MTAPIWFASPPEVHSALLSAGPGPASLQAAAAEWTSLSAEYASAAQELTAVLAAVQGGAW  60
           MTAP+W ASPPEVHSALLSAGPGP SLQAAAA W++LSAEYA+ AQEL+ V+AAV  G W
Sbjct  1   MTAPVWLASPPEVHSALLSAGPGPGSLQAAAAGWSALSAEYAAVAQELSVVVAAVGAGVW  60

Query  61  EGPSAEAYVAAHLPYLA  77
           +GPSAE +VAA++PY+A
Sbjct  61  QGPSAELFVAAYVPYVA  77



Lambda     K      H
   0.311    0.121    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 130175841596


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40