BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3744

Length=120
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15843365|ref|NP_338402.1|  ArsR family transcriptional regulat...   239    9e-62
gi|15610880|ref|NP_218261.1|  transcriptional regulatory protein ...   238    2e-61
gi|289759906|ref|ZP_06519284.1|  transcriptional regulatory prote...   236    9e-61
gi|323717608|gb|EGB26810.1|  transcriptional regulator [Mycobacte...   207    4e-52
gi|54025074|ref|YP_119316.1|  putative transcriptional regulator ...   191    4e-47
gi|118472200|ref|YP_889646.1|  ArsR family transcriptional regula...   163    6e-39
gi|345012984|ref|YP_004815338.1|  ArsR family transcriptional reg...   162    1e-38
gi|134102071|ref|YP_001107732.1|  ArsR family transcriptional reg...   158    3e-37
gi|297196229|ref|ZP_06913627.1|  transcriptional regulatory prote...   157    4e-37
gi|229492102|ref|ZP_04385912.1|  transcriptional regulator, ArsR ...   156    8e-37
gi|297157051|gb|ADI06763.1|  putative regulatory protein [Strepto...   154    4e-36
gi|311900469|dbj|BAJ32877.1|  putative ArsR family transcriptiona...   154    5e-36
gi|256378323|ref|YP_003101983.1|  ArsR family transcriptional reg...   152    1e-35
gi|290956294|ref|YP_003487476.1|  regulatory protein [Streptomyce...   149    2e-34
gi|302557342|ref|ZP_07309684.1|  ArsR family transcriptional regu...   148    2e-34
gi|302555222|ref|ZP_07307564.1|  regulatory protein [Streptomyces...   147    4e-34
gi|329940463|ref|ZP_08289744.1|  ArsR family transcriptional regu...   146    8e-34
gi|291436204|ref|ZP_06575594.1|  regulatory protein [Streptomyces...   146    9e-34
gi|302543192|ref|ZP_07295534.1|  ArsR family transcriptional regu...   145    2e-33
gi|337763121|emb|CCB71829.1|  putative regulatory protein [Strept...   145    2e-33
gi|289767957|ref|ZP_06527335.1|  regulatory protein [Streptomyces...   145    3e-33
gi|294634171|ref|ZP_06712723.1|  ArsR family transcriptional regu...   144    5e-33
gi|21224765|ref|NP_630544.1|  regulatory protein [Streptomyces co...   143    7e-33
gi|328884221|emb|CCA57460.1|  regulatory protein [Streptomyces ve...   142    1e-32
gi|239992224|ref|ZP_04712888.1|  ArsR family transcriptional regu...   142    2e-32
gi|291449210|ref|ZP_06588600.1|  transcriptional regulatory prote...   140    6e-32
gi|182440801|ref|YP_001828520.1|  ArsR family transcriptional reg...   139    2e-31
gi|320006909|gb|ADW01759.1|  regulatory protein ArsR [Streptomyce...   134    5e-30
gi|302546722|ref|ZP_07299064.1|  ArsR family transcriptional regu...   127    5e-28
gi|345010986|ref|YP_004813340.1|  regulatory protein ArsR [Strept...   117    4e-25
gi|194016729|ref|ZP_03055342.1|  ArsR family transcriptional regu...  88.2    4e-16
gi|163840924|ref|YP_001625329.1|  ArsR family transcriptional reg...  87.4    6e-16
gi|308173874|ref|YP_003920579.1|  CzrA [Bacillus amyloliquefacien...  87.0    9e-16
gi|154686321|ref|YP_001421482.1|  YozA [Bacillus amyloliquefacien...  86.7    1e-15
gi|157692612|ref|YP_001487074.1|  transcription regulator ArsR [B...  85.9    2e-15
gi|313678935|ref|YP_004056674.1|  ArsR family transcriptional reg...  84.7    4e-15
gi|345021642|ref|ZP_08785255.1|  YozA [Ornithinibacillus sp. TW25]    84.3    5e-15
gi|319650222|ref|ZP_08004368.1|  YozA protein [Bacillus sp. 2_A_5...  83.2    1e-14
gi|332981205|ref|YP_004462646.1|  ArsR family transcriptional reg...  82.4    2e-14
gi|332686723|ref|YP_004456497.1|  ArsR family transcriptional reg...  81.3    4e-14
gi|282164041|ref|YP_003356426.1|  ArsR family transcriptional reg...  81.3    5e-14
gi|224477136|ref|YP_002634742.1|  putative repressor protein [Sta...  81.3    5e-14
gi|314939553|ref|ZP_07846780.1|  transcriptional regulator, ArsR ...  80.9    5e-14
gi|302391881|ref|YP_003827701.1|  ArsR family transcriptional reg...  80.9    6e-14
gi|258514999|ref|YP_003191221.1|  transcriptional regulator, ArsR...  80.9    6e-14
gi|258616613|ref|ZP_05714383.1|  ArsR family transcriptional regu...  80.9    6e-14
gi|227551979|ref|ZP_03982028.1|  ArsR family transcriptional regu...  80.5    7e-14
gi|52080570|ref|YP_079361.1|  DNA-binding protein [Bacillus liche...  80.5    7e-14
gi|257879919|ref|ZP_05659572.1|  transcriptional regulator [Enter...  80.5    7e-14
gi|134098085|ref|YP_001103746.1|  arsenical resistance operon rep...  80.5    7e-14


>gi|15843365|ref|NP_338402.1| ArsR family transcriptional regulator [Mycobacterium tuberculosis 
CDC1551]
 gi|148824949|ref|YP_001289703.1| ArsR family transcriptional regulator [Mycobacterium tuberculosis 
F11]
 gi|253800791|ref|YP_003033792.1| transcriptional regulator, arsR-family [Mycobacterium tuberculosis 
KZN 1435]
 12 more sequence titles
 Length=135

 Score =  239 bits (610),  Expect = 9e-62, Method: Compositional matrix adjust.
 Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%)

Query  1    MGHGVEGRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQ  60
            MGHGVEGRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQ
Sbjct  16   MGHGVEGRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQ  75

Query  61   SAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSDRHPSAG  120
            SAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSDRHPSAG
Sbjct  76   SAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSDRHPSAG  135


>gi|15610880|ref|NP_218261.1| transcriptional regulatory protein ArsR-family [Mycobacterium 
tuberculosis H37Rv]
 gi|31794914|ref|NP_857407.1| transcriptional regulatory protein ArsR-family [Mycobacterium 
bovis AF2122/97]
 gi|121639658|ref|YP_979882.1| ArsR family transcriptional regulator [Mycobacterium bovis BCG 
str. Pasteur 1173P2]
 62 more sequence titles
 Length=120

 Score =  238 bits (607),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%)

Query  1    MGHGVEGRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQ  60
            MGHGVEGRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQ
Sbjct  1    MGHGVEGRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQ  60

Query  61   SAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSDRHPSAG  120
            SAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSDRHPSAG
Sbjct  61   SAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSDRHPSAG  120


>gi|289759906|ref|ZP_06519284.1| transcriptional regulatory protein [Mycobacterium tuberculosis 
T85]
 gi|289715470|gb|EFD79482.1| transcriptional regulatory protein [Mycobacterium tuberculosis 
T85]
Length=120

 Score =  236 bits (601),  Expect = 9e-61, Method: Compositional matrix adjust.
 Identities = 119/120 (99%), Positives = 119/120 (99%), Gaps = 0/120 (0%)

Query  1    MGHGVEGRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQ  60
            MGHGVEGRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQ
Sbjct  1    MGHGVEGRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQ  60

Query  61   SAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSDRHPSAG  120
            SAVSHQLRVLRNL LVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSDRHPSAG
Sbjct  61   SAVSHQLRVLRNLSLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSDRHPSAG  120


>gi|323717608|gb|EGB26810.1| transcriptional regulator [Mycobacterium tuberculosis CDC1551A]
Length=106

 Score =  207 bits (528),  Expect = 4e-52, Method: Compositional matrix adjust.
 Identities = 105/106 (99%), Positives = 106/106 (100%), Gaps = 0/106 (0%)

Query  15   LDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRNLG  74
            +DSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRNLG
Sbjct  1    MDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRNLG  60

Query  75   LVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSDRHPSAG  120
            LVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSDRHPSAG
Sbjct  61   LVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSDRHPSAG  106


>gi|54025074|ref|YP_119316.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
 gi|54016582|dbj|BAD57952.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
Length=120

 Score =  191 bits (484),  Expect = 4e-47, Method: Compositional matrix adjust.
 Identities = 94/120 (79%), Positives = 107/120 (90%), Gaps = 0/120 (0%)

Query  1    MGHGVEGRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQ  60
            MGHGVEGR+RP+A LD+ AAAQVA+TLQALATPSRL+IL++LR GP PVT+LAEA+GMEQ
Sbjct  1    MGHGVEGRSRPTARLDADAAAQVATTLQALATPSRLLILSELRQGPSPVTELAEAVGMEQ  60

Query  61   SAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSDRHPSAG  120
            SAVSHQLR+LRNLGLV G R GR IVY LYD HVAQLLDEA+YHSEHL LGL+DR  +AG
Sbjct  61   SAVSHQLRLLRNLGLVTGSRVGRKIVYRLYDDHVAQLLDEAVYHSEHLRLGLADRPEAAG  120


>gi|118472200|ref|YP_889646.1| ArsR family transcriptional regulator [Mycobacterium smegmatis 
str. MC2 155]
 gi|118173487|gb|ABK74383.1| transcriptional regulator, ArsR family protein [Mycobacterium 
smegmatis str. MC2 155]
Length=117

 Score =  163 bits (413),  Expect = 6e-39, Method: Compositional matrix adjust.
 Identities = 79/114 (70%), Positives = 97/114 (86%), Gaps = 0/114 (0%)

Query  1    MGHGVEGRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQ  60
            MGHGVEGR+ P+A LD+ +A +VA TLQALA+P+RL+ILT+LR  P  VT+L+ A+GMEQ
Sbjct  1    MGHGVEGRSTPAASLDAASAVKVAETLQALASPNRLLILTRLRESPCSVTELSAAVGMEQ  60

Query  61   SAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
             AVS+QLR+LR LGLV GDR+GR+IVY LYD+HVAQLLDEAIYH EHL LG+ D
Sbjct  61   PAVSNQLRLLRTLGLVTGDRSGRNIVYRLYDSHVAQLLDEAIYHIEHLRLGVRD  114


>gi|345012984|ref|YP_004815338.1| ArsR family transcriptional regulator [Streptomyces violaceusniger 
Tu 4113]
 gi|344039333|gb|AEM85058.1| transcriptional regulator, ArsR family [Streptomyces violaceusniger 
Tu 4113]
Length=128

 Score =  162 bits (411),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 81/114 (72%), Positives = 93/114 (82%), Gaps = 0/114 (0%)

Query  1    MGHGVEGRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQ  60
            MGHG + +  P+A LD+ +AA +A+TLQALATPSRLMILT+LR  P  VT+LAEA+GMEQ
Sbjct  1    MGHGADSQTTPAAHLDADSAATIAATLQALATPSRLMILTRLRQAPCAVTELAEAVGMEQ  60

Query  61   SAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            SAVSHQLR+LR LGLV G R GR IVYSLYD HVAQLLDEA+YH EHL LG  D
Sbjct  61   SAVSHQLRLLRALGLVTGSRQGRRIVYSLYDNHVAQLLDEAVYHIEHLRLGARD  114


>gi|134102071|ref|YP_001107732.1| ArsR family transcriptional regulator [Saccharopolyspora erythraea 
NRRL 2338]
 gi|291004894|ref|ZP_06562867.1| ArsR family transcriptional regulator [Saccharopolyspora erythraea 
NRRL 2338]
 gi|133914694|emb|CAM04807.1| transcriptional regulatory protein (probably ArsR-family) [Saccharopolyspora 
erythraea NRRL 2338]
Length=114

 Score =  158 bits (399),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 82/114 (72%), Positives = 101/114 (89%), Gaps = 0/114 (0%)

Query  1    MGHGVEGRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQ  60
            MGHGV+ +  P+A LD+ +AA VA TLQALATPSRL+IL++LR G L VT+LAEA+GMEQ
Sbjct  1    MGHGVDSQATPAARLDAASAASVAETLQALATPSRLLILSELRQGALSVTELAEAVGMEQ  60

Query  61   SAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            SAVSHQLR+LR+LGLV G+R+GRS+VYSLYD+HVAQLLDEA+YH EHL LG++D
Sbjct  61   SAVSHQLRLLRSLGLVTGNRSGRSVVYSLYDSHVAQLLDEAVYHIEHLRLGIAD  114


>gi|297196229|ref|ZP_06913627.1| transcriptional regulatory protein [Streptomyces pristinaespiralis 
ATCC 25486]
 gi|197720041|gb|EDY63949.1| transcriptional regulatory protein [Streptomyces pristinaespiralis 
ATCC 25486]
Length=122

 Score =  157 bits (398),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 81/114 (72%), Positives = 91/114 (80%), Gaps = 0/114 (0%)

Query  1    MGHGVEGRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQ  60
            MGHGV G   P+A LD+ +AA +A+TLQALATPSRLMILT+LR GP  VT+LAEA+ MEQ
Sbjct  1    MGHGVSGGTTPAAHLDADSAATIAATLQALATPSRLMILTRLRQGPCGVTELAEAVEMEQ  60

Query  61   SAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            SAVSHQLR+LR L LV G R GR I YSLYD HVAQLLDEA+YH EHL LG  D
Sbjct  61   SAVSHQLRLLRALSLVSGTRQGRRIEYSLYDNHVAQLLDEAVYHIEHLRLGTRD  114


>gi|229492102|ref|ZP_04385912.1| transcriptional regulator, ArsR family [Rhodococcus erythropolis 
SK121]
 gi|229320999|gb|EEN86810.1| transcriptional regulator, ArsR family [Rhodococcus erythropolis 
SK121]
Length=130

 Score =  156 bits (395),  Expect = 8e-37, Method: Compositional matrix adjust.
 Identities = 80/114 (71%), Positives = 92/114 (81%), Gaps = 0/114 (0%)

Query  1    MGHGVEGRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQ  60
            MGH V+GR RP A LD+++AA VA+TLQALATPSRL ILTQLR GP  V DLA+A+ MEQ
Sbjct  9    MGHEVDGRPRPPAQLDAESAATVAATLQALATPSRLRILTQLRQGPSGVNDLADAVEMEQ  68

Query  61   SAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            SAVSHQLR+LR +GLV G R+GRSIVY LYD HVA LLDEA+YH EHL +   D
Sbjct  69   SAVSHQLRLLRAMGLVTGARSGRSIVYRLYDNHVAMLLDEAVYHIEHLGMAAPD  122


>gi|297157051|gb|ADI06763.1| putative regulatory protein [Streptomyces bingchenggensis BCW-1]
Length=134

 Score =  154 bits (389),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 78/116 (68%), Positives = 91/116 (79%), Gaps = 2/116 (1%)

Query  1    MGHGVE--GRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGM  58
            MGHG        P A LD+  AA+VA+TLQALATPSRL+IL +LR GPL  T+LA  +GM
Sbjct  1    MGHGAASPASTVPRARLDAAGAAKVATTLQALATPSRLLILARLREGPLAATELAAEVGM  60

Query  59   EQSAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            EQSA SHQLR+LRNLGLV G R GRS+VY+LYD HVA+LLD+A+YH EHL LGLSD
Sbjct  61   EQSACSHQLRLLRNLGLVTGTRKGRSVVYALYDNHVAELLDQALYHVEHLRLGLSD  116


>gi|311900469|dbj|BAJ32877.1| putative ArsR family transcriptional regulator [Kitasatospora 
setae KM-6054]
Length=123

 Score =  154 bits (389),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 80/119 (68%), Positives = 92/119 (78%), Gaps = 2/119 (1%)

Query  1    MGHGVEGRNR--PSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGM  58
            MGHG        P  PLD+ +AA+VA+TLQALATPSRL+IL++LR GP   T+LA A G+
Sbjct  1    MGHGASPVKSAVPRTPLDADSAARVATTLQALATPSRLLILSRLREGPCAATELAHAAGL  60

Query  59   EQSAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSDRHP  117
            EQSA SHQLR+LRNLGLVVG R GRSIVY LYD HVA LLD+A+YH EHL LGLSD  P
Sbjct  61   EQSACSHQLRLLRNLGLVVGRRNGRSIVYELYDNHVAGLLDQAVYHIEHLRLGLSDAEP  119


>gi|256378323|ref|YP_003101983.1| ArsR family transcriptional regulator [Actinosynnema mirum DSM 
43827]
 gi|255922626|gb|ACU38137.1| transcriptional regulator, ArsR family [Actinosynnema mirum DSM 
43827]
Length=124

 Score =  152 bits (385),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 86/120 (72%), Positives = 101/120 (85%), Gaps = 1/120 (0%)

Query  1    MGHGVEGRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQ  60
            MGH   GR  P+A LD+++AA VA+TLQALATPSRL+IL +LR+GPLPVT LAEA+GMEQ
Sbjct  1    MGHIASGRGTPAARLDAESAAHVANTLQALATPSRLLILAELRHGPLPVTALAEAVGMEQ  60

Query  61   SAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSDRHPSAG  120
            SAVSHQLR+LR L LVVG R GRSI+YSL+D HVA LLD+A+YHSEHL LGL DR P+ G
Sbjct  61   SAVSHQLRLLRALRLVVGTRNGRSIIYSLHDDHVAHLLDQAVYHSEHLRLGLVDR-PAGG  119


>gi|290956294|ref|YP_003487476.1| regulatory protein [Streptomyces scabiei 87.22]
 gi|260645820|emb|CBG68911.1| putative regulatory protein [Streptomyces scabiei 87.22]
Length=122

 Score =  149 bits (376),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 75/117 (65%), Positives = 94/117 (81%), Gaps = 3/117 (2%)

Query  1    MGHGVEGRNRPSAP---LDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIG  57
            MGHG     + + P   LD+   A+VA+TLQAL+TPSRL+IL +LR GPLP T+LA  +G
Sbjct  1    MGHGAVTSAQDATPRVRLDAGNVAKVATTLQALSTPSRLLILARLREGPLPATELAAEVG  60

Query  58   MEQSAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            MEQSA SHQLR+LRNLGLVVG+R GRS+VY+L+D HVA+LLD+A++H EHL LGLSD
Sbjct  61   MEQSACSHQLRLLRNLGLVVGERQGRSVVYALHDHHVAELLDQAVFHVEHLRLGLSD  117


>gi|302557342|ref|ZP_07309684.1| ArsR family transcriptional regulator [Streptomyces griseoflavus 
Tu4000]
 gi|302474960|gb|EFL38053.1| ArsR family transcriptional regulator [Streptomyces griseoflavus 
Tu4000]
Length=119

 Score =  148 bits (374),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 75/116 (65%), Positives = 93/116 (81%), Gaps = 2/116 (1%)

Query  1    MGHG--VEGRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGM  58
            MGHG  +   +     LD+   A+VA+TLQAL+TPSRL+IL +LR GPLP T+LA  +GM
Sbjct  1    MGHGAVIPQDDAARVRLDADNVAKVATTLQALSTPSRLLILARLREGPLPATELAAEVGM  60

Query  59   EQSAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            EQSA SHQLR+LRNLGLVVG+R GRS+VY+L+D HVA+LLD+A+YH EHL LGLSD
Sbjct  61   EQSACSHQLRLLRNLGLVVGERRGRSVVYALHDHHVAELLDQAVYHVEHLRLGLSD  116


>gi|302555222|ref|ZP_07307564.1| regulatory protein [Streptomyces viridochromogenes DSM 40736]
 gi|302472840|gb|EFL35933.1| regulatory protein [Streptomyces viridochromogenes DSM 40736]
Length=121

 Score =  147 bits (372),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 76/118 (65%), Positives = 94/118 (80%), Gaps = 4/118 (3%)

Query  1    MGHGVEGRNRPSAP----LDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAI  56
            MGHG     + +A     LD+   A+VA+TLQAL+TPSRL+IL +LR GPLP T+LA  +
Sbjct  1    MGHGAVIPAQDAAAERVRLDADNVAKVATTLQALSTPSRLLILARLREGPLPATELAAEV  60

Query  57   GMEQSAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            GMEQSA SHQLR+LRNLGLVVG+R GRS+VY+L+D HVA+LLD+A+YH EHL LGLSD
Sbjct  61   GMEQSACSHQLRLLRNLGLVVGERRGRSVVYALHDHHVAELLDQAVYHVEHLRLGLSD  118


>gi|329940463|ref|ZP_08289744.1| ArsR family transcriptional regulator [Streptomyces griseoaurantiacus 
M045]
 gi|329300524|gb|EGG44421.1| ArsR family transcriptional regulator [Streptomyces griseoaurantiacus 
M045]
Length=127

 Score =  146 bits (369),  Expect = 8e-34, Method: Compositional matrix adjust.
 Identities = 74/116 (64%), Positives = 90/116 (78%), Gaps = 2/116 (1%)

Query  1    MGHGVEGRNRPSAP--LDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGM  58
            MGHG + +N  +    LD+  +  VA+TLQALATPSRL IL +L+ GP  V DLAEA+GM
Sbjct  1    MGHGADDKNTATTRERLDAVGSTDVAATLQALATPSRLYILARLQEGPCSVGDLAEAVGM  60

Query  59   EQSAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            E SA SHQLR+LRNLGLV G+R GRSIVY+LYD HVA+LLD+A++H EHL LGL D
Sbjct  61   EASACSHQLRLLRNLGLVTGERQGRSIVYALYDHHVAELLDQALFHVEHLRLGLRD  116


>gi|291436204|ref|ZP_06575594.1| regulatory protein [Streptomyces ghanaensis ATCC 14672]
 gi|291339099|gb|EFE66055.1| regulatory protein [Streptomyces ghanaensis ATCC 14672]
Length=120

 Score =  146 bits (369),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 75/117 (65%), Positives = 93/117 (80%), Gaps = 3/117 (2%)

Query  1    MGHGVEGRNRPSAP---LDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIG  57
            MGHG     +  A    LD+   A+VA+TLQAL+TPSRL+IL +LR GPLP T+LA  +G
Sbjct  1    MGHGAVIPAQDDAERVRLDADNVAKVATTLQALSTPSRLLILARLREGPLPATELAAEVG  60

Query  58   MEQSAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            MEQSA SHQLR+LRNLGLVVG+R GRS+VY+L+D HVA+LLD+A+YH EHL LG+SD
Sbjct  61   MEQSACSHQLRLLRNLGLVVGERRGRSVVYALHDHHVAELLDQAVYHVEHLRLGISD  117


>gi|302543192|ref|ZP_07295534.1| ArsR family transcriptional regulator [Streptomyces hygroscopicus 
ATCC 53653]
 gi|302460810|gb|EFL23903.1| ArsR family transcriptional regulator [Streptomyces himastatinicus 
ATCC 53653]
Length=118

 Score =  145 bits (366),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 74/118 (63%), Positives = 91/118 (78%), Gaps = 4/118 (3%)

Query  1    MGHGVE----GRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAI  56
            MGHG +        P A L  + A  VA+TLQALATPSRL+IL +LR GP P T+LAEA+
Sbjct  1    MGHGAQPPAGDATAPRARLTPENAPTVAATLQALATPSRLLILARLREGPCPATELAEAV  60

Query  57   GMEQSAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            GM+QSA SHQLR+LRNLGLV G R GRS+VYSL+D HVA+LLD+A++H EHL LG++D
Sbjct  61   GMQQSACSHQLRLLRNLGLVTGTRQGRSVVYSLHDNHVAELLDQALHHVEHLRLGVTD  118


>gi|337763121|emb|CCB71829.1| putative regulatory protein [Streptomyces cattleya NRRL 8057]
Length=127

 Score =  145 bits (366),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 75/117 (65%), Positives = 89/117 (77%), Gaps = 3/117 (2%)

Query  1    MGHGVEGRNRPSAPLDSQAAA---QVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIG  57
            MGHG       + P     AA   +VA+TLQALATPSRL+IL +LR GPLP T+LA  +G
Sbjct  1    MGHGAAATASNAVPRARLDAADAAKVATTLQALATPSRLLILARLREGPLPATELAAEVG  60

Query  58   MEQSAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            MEQSA SHQLR+LRNLGLV G R GRS+VY+LYD HVA+LLD+A+YH EHL LGL+D
Sbjct  61   MEQSACSHQLRLLRNLGLVTGTRQGRSVVYALYDNHVAELLDQALYHVEHLRLGLTD  117


>gi|289767957|ref|ZP_06527335.1| regulatory protein [Streptomyces lividans TK24]
 gi|289698156|gb|EFD65585.1| regulatory protein [Streptomyces lividans TK24]
Length=120

 Score =  145 bits (365),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 70/100 (70%), Positives = 86/100 (86%), Gaps = 0/100 (0%)

Query  15   LDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRNLG  74
            LD+   A+VA+TLQAL+TPSRL+IL +LR GPLP T+LA  +GMEQSA SHQLR+LRNLG
Sbjct  18   LDADNVAKVATTLQALSTPSRLLILARLREGPLPATELAAEVGMEQSACSHQLRLLRNLG  77

Query  75   LVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            LVVG+R GRS+VY+L+D HVA LLD+A+YH EHL LG+SD
Sbjct  78   LVVGERRGRSVVYALHDDHVAGLLDQAVYHVEHLRLGISD  117


>gi|294634171|ref|ZP_06712723.1| ArsR family transcriptional regulator [Streptomyces sp. e14]
 gi|292829828|gb|EFF88185.1| ArsR family transcriptional regulator [Streptomyces sp. e14]
Length=128

 Score =  144 bits (363),  Expect = 5e-33, Method: Compositional matrix adjust.
 Identities = 74/116 (64%), Positives = 88/116 (76%), Gaps = 2/116 (1%)

Query  1    MGHGVE--GRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGM  58
            MGHG +  G       LD+   A VA+TLQALATPSRL IL +L+ G   V+DLAEA+GM
Sbjct  1    MGHGTDTAGNATTRERLDAVGTADVAATLQALATPSRLYILARLQEGACSVSDLAEAVGM  60

Query  59   EQSAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            E SA SHQLR+LRNLGLV G+R GRSIVY+LYD HVA+LLD+A+YH EHL LG+ D
Sbjct  61   EASACSHQLRLLRNLGLVTGERHGRSIVYALYDDHVAELLDQALYHVEHLRLGVRD  116


>gi|21224765|ref|NP_630544.1| regulatory protein [Streptomyces coelicolor A3(2)]
 gi|4158205|emb|CAA22768.1| putative regulatory protein [Streptomyces coelicolor A3(2)]
Length=120

 Score =  143 bits (361),  Expect = 7e-33, Method: Compositional matrix adjust.
 Identities = 69/100 (69%), Positives = 85/100 (85%), Gaps = 0/100 (0%)

Query  15   LDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRNLG  74
            LD+    +VA+TLQAL+TPSRL+IL +LR GPLP T+LA  +GMEQSA SHQLR+LRNLG
Sbjct  18   LDADNVTKVATTLQALSTPSRLLILARLREGPLPATELAAEVGMEQSACSHQLRLLRNLG  77

Query  75   LVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            LVVG+R GRS+VY+L+D HVA LLD+A+YH EHL LG+SD
Sbjct  78   LVVGERRGRSVVYALHDDHVAGLLDQAVYHVEHLRLGISD  117


>gi|328884221|emb|CCA57460.1| regulatory protein [Streptomyces venezuelae ATCC 10712]
Length=134

 Score =  142 bits (359),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 74/116 (64%), Positives = 88/116 (76%), Gaps = 2/116 (1%)

Query  1    MGHGVEGRNRPSAP--LDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGM  58
            MGHG E     +    LD+   A VA+TLQALATPSRL IL +L+ GP  V DLA+A+GM
Sbjct  1    MGHGTETARSATTRERLDAVGTADVAATLQALATPSRLHILARLQEGPCSVGDLADAVGM  60

Query  59   EQSAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            E SA SHQLR+LRNLGLV G+R GRSIVY+LYD HVA+LLD+A+YH EHL LG+ D
Sbjct  61   EASACSHQLRLLRNLGLVTGERHGRSIVYALYDNHVAELLDQALYHVEHLRLGMRD  116


>gi|239992224|ref|ZP_04712888.1| ArsR family transcriptional regulator [Streptomyces roseosporus 
NRRL 11379]
Length=128

 Score =  142 bits (358),  Expect = 2e-32, Method: Compositional matrix adjust.
 Identities = 73/116 (63%), Positives = 89/116 (77%), Gaps = 2/116 (1%)

Query  1    MGHGVEGRNRPSAP--LDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGM  58
            MGHG +  +  +    LD+   A VA+TLQALATPSRL IL +L+ GP  V DLAEA+GM
Sbjct  1    MGHGSDMTSSATTRERLDAVGTADVAATLQALATPSRLHILARLQEGPCSVGDLAEAVGM  60

Query  59   EQSAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            E SA SHQLR+LRNLGLV G+R GRSI+Y+LYD HVA+LLD+A+YH EHL LG+ D
Sbjct  61   EASACSHQLRLLRNLGLVTGERHGRSIIYALYDNHVAELLDQALYHVEHLRLGVRD  116


>gi|291449210|ref|ZP_06588600.1| transcriptional regulatory protein [Streptomyces roseosporus 
NRRL 15998]
 gi|291352157|gb|EFE79061.1| transcriptional regulatory protein [Streptomyces roseosporus 
NRRL 15998]
Length=122

 Score =  140 bits (353),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 69/100 (69%), Positives = 82/100 (82%), Gaps = 0/100 (0%)

Query  15   LDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRNLG  74
            LD+   A VA+TLQALATPSRL IL +L+ GP  V DLAEA+GME SA SHQLR+LRNLG
Sbjct  11   LDAVGTADVAATLQALATPSRLHILARLQEGPCSVGDLAEAVGMEASACSHQLRLLRNLG  70

Query  75   LVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            LV G+R GRSI+Y+LYD HVA+LLD+A+YH EHL LG+ D
Sbjct  71   LVTGERHGRSIIYALYDNHVAELLDQALYHVEHLRLGVRD  110


>gi|182440801|ref|YP_001828520.1| ArsR family transcriptional regulator [Streptomyces griseus subsp. 
griseus NBRC 13350]
 gi|178469317|dbj|BAG23837.1| putative ArsR-family transcriptional regulator [Streptomyces 
griseus subsp. griseus NBRC 13350]
Length=120

 Score =  139 bits (350),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 75/116 (65%), Positives = 87/116 (75%), Gaps = 2/116 (1%)

Query  1    MGHGVEGRNRPSAP--LDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGM  58
            MGHG    +  S    LD+   A VA+TLQALATPSRL IL +L+ GP  V DLA+A+GM
Sbjct  1    MGHGNVTTSSASTRERLDAVGPADVAATLQALATPSRLYILARLQEGPCAVGDLADAVGM  60

Query  59   EQSAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            E SA SHQLR+LRNLGLV G+R GRSIVYSLYD HVA+LL +A+YH EHL LGL D
Sbjct  61   EASACSHQLRLLRNLGLVAGERRGRSIVYSLYDNHVAELLGQALYHVEHLRLGLHD  116


>gi|320006909|gb|ADW01759.1| regulatory protein ArsR [Streptomyces flavogriseus ATCC 33331]
Length=131

 Score =  134 bits (337),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 75/116 (65%), Positives = 89/116 (77%), Gaps = 2/116 (1%)

Query  1    MGHGVEGRNRPSAP--LDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGM  58
            MGHG + +   +    LD+  AA VA+TLQALATPSRL IL +L+ GP  V DLAEA+ M
Sbjct  4    MGHGRDEQTSATTRERLDAVGAAGVAATLQALATPSRLRILARLQEGPCAVGDLAEAVEM  63

Query  59   EQSAVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            E SA SHQLR+LRNLGLV G+R GRSIVY+LYD HVA+LLD+A+YH EHL LGL D
Sbjct  64   EPSACSHQLRLLRNLGLVAGERQGRSIVYALYDHHVAELLDQALYHVEHLRLGLRD  119


>gi|302546722|ref|ZP_07299064.1| ArsR family transcriptional regulator [Streptomyces hygroscopicus 
ATCC 53653]
 gi|302464340|gb|EFL27433.1| ArsR family transcriptional regulator [Streptomyces himastatinicus 
ATCC 53653]
Length=117

 Score =  127 bits (319),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 71/111 (64%), Positives = 83/111 (75%), Gaps = 3/111 (2%)

Query  7    GRNRPSA-PLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSH  65
            GR+  +A  LD   AA VA+TLQALATPSRL+ILT L+  P  VT LA  +GMEQSAVSH
Sbjct  9    GRDALAAVRLDDATAASVATTLQALATPSRLLILTTLQQSPHSVTQLAAEVGMEQSAVSH  68

Query  66   QLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSDRH  116
            QLR+LR LGL+ G R GR IVY LYD HVAQLLD+A++H E  HLG+ D H
Sbjct  69   QLRLLRTLGLITGRRDGRRIVYRLYDDHVAQLLDQAVHHIE--HLGVHDPH  117


>gi|345010986|ref|YP_004813340.1| regulatory protein ArsR [Streptomyces violaceusniger Tu 4113]
 gi|344037335|gb|AEM83060.1| regulatory protein ArsR [Streptomyces violaceusniger Tu 4113]
Length=129

 Score =  117 bits (294),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 71/105 (68%), Positives = 80/105 (77%), Gaps = 0/105 (0%)

Query  10   RPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRV  69
            R +  LD   AA VA+ LQALATPSRL+ILT LR  P  VT+LA  IGMEQSAVS QLR+
Sbjct  24   RAAVRLDDATAASVAAALQALATPSRLLILTTLRQSPHSVTELAAGIGMEQSAVSRQLRL  83

Query  70   LRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHLHLGLSD  114
            LR LGLV G R GR IVYSLYD HVAQLLD+A++H EHL LG+ D
Sbjct  84   LRTLGLVTGRRNGRRIVYSLYDDHVAQLLDQAVHHIEHLRLGIRD  128


>gi|194016729|ref|ZP_03055342.1| ArsR family transcriptional regulator YozA [Bacillus pumilus 
ATCC 7061]
 gi|194011335|gb|EDW20904.1| ArsR family transcriptional regulator YozA [Bacillus pumilus 
ATCC 7061]
Length=109

 Score = 88.2 bits (217),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 44/101 (44%), Positives = 63/101 (63%), Gaps = 0/101 (0%)

Query  7    GRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQ  66
             + +    LD ++   V+ T +AL+ P+R+ IL  L  G   V D+AE + + QS VSHQ
Sbjct  8    NQEQERMELDEESLFLVSQTFKALSDPTRIRILHLLSQGEHSVNDIAETLNLMQSTVSHQ  67

Query  67   LRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEH  107
            LR L+NL LV   RAG SI YS  D HV ++L++ IYH++H
Sbjct  68   LRFLKNLRLVKSRRAGTSIFYSPEDQHVMEVLEQMIYHAQH  108


>gi|163840924|ref|YP_001625329.1| ArsR family transcriptional regulator [Renibacterium salmoninarum 
ATCC 33209]
 gi|162954400|gb|ABY23915.1| transcriptional regulator, ArsR family [Renibacterium salmoninarum 
ATCC 33209]
Length=96

 Score = 87.4 bits (215),  Expect = 6e-16, Method: Compositional matrix adjust.
 Identities = 41/94 (44%), Positives = 61/94 (65%), Gaps = 0/94 (0%)

Query  14   PLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRNL  73
             L ++ A  +A  +QAL++P RL+IL +L + P  V+ L E  GM Q+ +S+ LR+LR+L
Sbjct  2    KLSNEHAEDLAQVMQALSSPGRLLILARLDDSPCSVSTLVEDCGMAQATISNHLRILRHL  61

Query  74   GLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEH  107
             LV G R GR ++YSLYD HV +   +A+ H  H
Sbjct  62   DLVTGQREGRQVIYSLYDAHVQEFFRQALGHIGH  95


>gi|308173874|ref|YP_003920579.1| CzrA [Bacillus amyloliquefaciens DSM 7]
 gi|307606738|emb|CBI43109.1| CzrA [Bacillus amyloliquefaciens DSM 7]
 gi|328553203|gb|AEB23695.1| CzrA [Bacillus amyloliquefaciens TA208]
 gi|328912020|gb|AEB63616.1| HTH-type transcriptional repressor czrA [Bacillus amyloliquefaciens 
LL3]
 gi|341827436|gb|AEK88687.1| putative transcriptional regulator [Bacillus amyloliquefaciens 
XH7]
Length=110

 Score = 87.0 bits (214),  Expect = 9e-16, Method: Compositional matrix adjust.
 Identities = 45/101 (45%), Positives = 59/101 (59%), Gaps = 0/101 (0%)

Query  7    GRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQ  66
             +N P+  LD +    VA T +AL  P+R+ IL  L  G   V D+AE + + QS VSHQ
Sbjct  9    NKNDPAVDLDEETLFLVAQTFKALCDPTRIRILHLLSQGEHAVNDIAEKLNLLQSTVSHQ  68

Query  67   LRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEH  107
            LR L+NL LV   R G SI YS  D HV  +L + I+H+ H
Sbjct  69   LRFLKNLRLVKSRREGTSIYYSPEDEHVLDVLQQMIHHTRH  109


>gi|154686321|ref|YP_001421482.1| YozA [Bacillus amyloliquefaciens FZB42]
 gi|154352172|gb|ABS74251.1| YozA [Bacillus amyloliquefaciens FZB42]
Length=110

 Score = 86.7 bits (213),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 45/101 (45%), Positives = 60/101 (60%), Gaps = 0/101 (0%)

Query  7    GRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQ  66
             +N P+  LD +    VA T +AL+ P+R+ IL  L  G   V D+AE + + QS VSHQ
Sbjct  9    NKNDPAVDLDEETLFLVAQTFKALSDPTRIRILHLLSQGEHAVNDIAEKLNLLQSTVSHQ  68

Query  67   LRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEH  107
            LR L+NL LV   R G SI YS  D HV  +L + I+H+ H
Sbjct  69   LRFLKNLRLVKSRREGTSIYYSPEDEHVLDVLQQMIHHTRH  109


>gi|157692612|ref|YP_001487074.1| transcription regulator ArsR [Bacillus pumilus SAFR-032]
 gi|157681370|gb|ABV62514.1| ArsR family transcriptional regulator YozA [Bacillus pumilus 
SAFR-032]
Length=109

 Score = 85.9 bits (211),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 43/101 (43%), Positives = 63/101 (63%), Gaps = 0/101 (0%)

Query  7    GRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQ  66
             + +    LD ++   V+ T +AL+ P+R+ IL  L  G   V D+AE + + QS VSHQ
Sbjct  8    NQEQERMELDEESLFLVSQTFKALSDPTRIRILHLLSQGEHSVNDIAETLNLMQSTVSHQ  67

Query  67   LRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEH  107
            LR L+NL LV   RAG SI YS  D HV ++L++ I+H++H
Sbjct  68   LRFLKNLRLVKSRRAGTSIFYSPEDQHVMEVLEQMIHHAQH  108


>gi|313678935|ref|YP_004056674.1| ArsR family transcriptional regulator [Oceanithermus profundus 
DSM 14977]
 gi|313151650|gb|ADR35501.1| transcriptional regulator, ArsR family [Oceanithermus profundus 
DSM 14977]
Length=119

 Score = 84.7 bits (208),  Expect = 4e-15, Method: Compositional matrix adjust.
 Identities = 44/98 (45%), Positives = 64/98 (66%), Gaps = 1/98 (1%)

Query  8    RNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQL  67
            R R + P D+   A+ +  L+ALA P+R+ IL  ++ G L V DL+  +GM QSA+SHQL
Sbjct  21   RARAALP-DADTIARASVLLKALADPTRMRILLAMKQGELCVCDLSHLLGMSQSAISHQL  79

Query  68   RVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHS  105
            RVLR+  LV   R GR + Y L D HV ++L++A+ H+
Sbjct  80   RVLRDNRLVSWRREGRQVFYRLADRHVEEILEDALEHA  117


>gi|345021642|ref|ZP_08785255.1| YozA [Ornithinibacillus sp. TW25]
Length=111

 Score = 84.3 bits (207),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 44/102 (44%), Positives = 60/102 (59%), Gaps = 0/102 (0%)

Query  6    EGRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSH  65
            E  +     LD +    V+ T +AL+ P+R+ IL  L  G   V D+AE + + QS+VSH
Sbjct  9    ETFHERKKELDEETLFVVSQTFKALSDPTRIRILNLLCTGERSVNDIAETLNLSQSSVSH  68

Query  66   QLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEH  107
            QLR L+NL LV   RAG ++ YS  D HV  LL +AI H+ H
Sbjct  69   QLRFLKNLRLVKYRRAGTTLFYSEDDVHVMNLLKQAIEHAAH  110


>gi|319650222|ref|ZP_08004368.1| YozA protein [Bacillus sp. 2_A_57_CT2]
 gi|317398053|gb|EFV78745.1| YozA protein [Bacillus sp. 2_A_57_CT2]
Length=105

 Score = 83.2 bits (204),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 44/95 (47%), Positives = 60/95 (64%), Gaps = 0/95 (0%)

Query  13   APLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRN  72
            A LD +    V+ T +AL+ P+RL IL  L +G   V ++AE + + QS VSHQLR L+N
Sbjct  10   ADLDEETLFMVSQTFKALSDPTRLRILHLLFHGEYSVNEIAENLSLLQSTVSHQLRFLKN  69

Query  73   LGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEH  107
            L LV   R G ++ YS  D HV  LL++AI HS+H
Sbjct  70   LRLVKFRREGTTLFYSHDDEHVISLLNQAIEHSQH  104


>gi|332981205|ref|YP_004462646.1| ArsR family transcriptional regulator [Mahella australiensis 
50-1 BON]
 gi|332698883|gb|AEE95824.1| transcriptional regulator, ArsR family [Mahella australiensis 
50-1 BON]
Length=119

 Score = 82.4 bits (202),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 42/93 (46%), Positives = 58/93 (63%), Gaps = 0/93 (0%)

Query  15   LDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRNLG  74
            L  + A  +A   +AL   +R+ IL  L N  L V D+A+A+ M QSA+SHQLRVLR+L 
Sbjct  26   LSDKEAIGLAEIFKALGDVTRVKILYLLANAELCVCDIADALNMTQSAISHQLRVLRDLR  85

Query  75   LVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEH  107
            LV   + G+S+ YSL D H+ QL  + + H EH
Sbjct  86   LVKFRKDGKSVFYSLDDEHILQLFSQGLEHVEH  118


>gi|332686723|ref|YP_004456497.1| ArsR family transcriptional regulator [Melissococcus plutonius 
ATCC 35311]
 gi|332370732|dbj|BAK21688.1| transcriptional regulator, ArsR family [Melissococcus plutonius 
ATCC 35311]
Length=95

 Score = 81.3 bits (199),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 40/92 (44%), Positives = 59/92 (65%), Gaps = 0/92 (0%)

Query  16   DSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRNLGL  75
            + +   +V+   + L+ P+RL IL  L+ G L VT L+E + MEQSAVSHQL++LR   +
Sbjct  3    EKEEIQKVSQLYKVLSDPTRLKILLYLKQGELNVTALSEKLNMEQSAVSHQLKLLRENHV  62

Query  76   VVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEH  107
            V  DR G++I Y L D HV  +L++ I H +H
Sbjct  63   VKTDRVGKTIFYILDDHHVLDILNQTIQHIKH  94


>gi|282164041|ref|YP_003356426.1| ArsR family transcriptional regulator [Methanocella paludicola 
SANAE]
 gi|282156355|dbj|BAI61443.1| ArsR family transcriptional regulator [Methanocella paludicola 
SANAE]
Length=123

 Score = 81.3 bits (199),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 38/103 (37%), Positives = 61/103 (60%), Gaps = 0/103 (0%)

Query  5    VEGRNRPSAPLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVS  64
            VE     +  L+     +++   + +  P+RL I+  L +G + V D+A A+GME SA+S
Sbjct  20   VEKAKTRAKDLEGNTIVRLSDIFKVMGDPTRLRIIHALSSGEMCVCDIAAALGMEHSAIS  79

Query  65   HQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEH  107
            HQLR+LRN+ +V   + G+  +YSL D HV QL +  + H+ H
Sbjct  80   HQLRILRNMRVVKFRKQGKEAIYSLDDEHVLQLFNGGLEHARH  122


>gi|224477136|ref|YP_002634742.1| putative repressor protein [Staphylococcus carnosus subsp. carnosus 
TM300]
 gi|222421743|emb|CAL28557.1| putative repressor protein [Staphylococcus carnosus subsp. carnosus 
TM300]
Length=101

 Score = 81.3 bits (199),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 39/93 (42%), Positives = 58/93 (63%), Gaps = 0/93 (0%)

Query  15   LDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRNLG  74
            L +   A V    ++L+ P+R+ I+  L  GP  V  +   +G+ QS VSHQL++LRN  
Sbjct  6    LKASTLANVTDIFKSLSEPNRIRIMHLLEQGPSSVGHITHTLGLSQSNVSHQLKILRNAE  65

Query  75   LVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEH  107
            LV  +R G+S +Y L D HV  LL++AI+H+EH
Sbjct  66   LVKSERQGQSKIYMLNDEHVVTLLNQAIHHAEH  98


>gi|314939553|ref|ZP_07846780.1| transcriptional regulator, ArsR family [Enterococcus faecium 
TX0133a04]
 gi|314942694|ref|ZP_07849520.1| transcriptional regulator, ArsR family [Enterococcus faecium 
TX0133C]
 gi|314948967|ref|ZP_07852333.1| transcriptional regulator, ArsR family [Enterococcus faecium 
TX0082]
 9 more sequence titles
 Length=116

 Score = 80.9 bits (198),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 41/94 (44%), Positives = 63/94 (68%), Gaps = 2/94 (2%)

Query  16   DSQAAA--QVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRNL  73
            D+Q +   +V+   + L+ P+RL IL  L++G   VT + +A+ MEQSAVSHQLR+LR  
Sbjct  22   DTQKSKVEKVSQLFKMLSDPTRLKILLYLKDGEQNVTAITQAVEMEQSAVSHQLRLLREN  81

Query  74   GLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEH  107
             +V   R G++I+YSL D+HV  +L++ + H EH
Sbjct  82   HVVKSHREGKAILYSLDDSHVLDILNQTLKHVEH  115


>gi|302391881|ref|YP_003827701.1| ArsR family transcriptional regulator [Acetohalobium arabaticum 
DSM 5501]
 gi|302203958|gb|ADL12636.1| transcriptional regulator, ArsR family [Acetohalobium arabaticum 
DSM 5501]
Length=127

 Score = 80.9 bits (198),  Expect = 6e-14, Method: Compositional matrix adjust.
 Identities = 38/83 (46%), Positives = 53/83 (64%), Gaps = 0/83 (0%)

Query  22   QVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRNLGLVVGDRA  81
            ++A T + L  P+R+ I+  L N  L V D++E + M  SAVSHQLRVLRNL LV   + 
Sbjct  35   KLAETFKVLGDPTRIKIINALSNVELCVCDISEHLEMSSSAVSHQLRVLRNLNLVKYRKE  94

Query  82   GRSIVYSLYDTHVAQLLDEAIYH  104
            GR++ YSL D H+ QL  + + H
Sbjct  95   GRTVYYSLDDDHILQLFSQCLEH  117


>gi|258514999|ref|YP_003191221.1| transcriptional regulator, ArsR family [Desulfotomaculum acetoxidans 
DSM 771]
 gi|257778704|gb|ACV62598.1| transcriptional regulator, ArsR family [Desulfotomaculum acetoxidans 
DSM 771]
Length=119

 Score = 80.9 bits (198),  Expect = 6e-14, Method: Compositional matrix adjust.
 Identities = 37/92 (41%), Positives = 57/92 (62%), Gaps = 0/92 (0%)

Query  16   DSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRNLGL  75
            D +   ++++  +AL  P+R  IL  L+   + V D++  + M QSA+SHQLRVLRNL +
Sbjct  27   DIEEVQKLSAIYKALGDPTRFKILFCLKQEEMCVCDISAILDMSQSAISHQLRVLRNLRI  86

Query  76   VVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEH  107
            V   + G+ + YSL D H+ ++LDE I H  H
Sbjct  87   VKYRKEGKMVFYSLDDKHIFRILDEGINHIRH  118


>gi|258616613|ref|ZP_05714383.1| ArsR family transcriptional regulator [Enterococcus faecium DO]
 gi|293556359|ref|ZP_06674940.1| transcriptional regulator, ArsR family [Enterococcus faecium 
E1039]
 gi|293559417|ref|ZP_06675956.1| transcriptional regulator, ArsR family [Enterococcus faecium 
E1162]
 gi|294616308|ref|ZP_06696101.1| transcriptional regulator, ArsR family [Enterococcus faecium 
E1636]
 gi|291590822|gb|EFF22538.1| transcriptional regulator, ArsR family [Enterococcus faecium 
E1636]
 gi|291601426|gb|EFF31697.1| transcriptional regulator, ArsR family [Enterococcus faecium 
E1039]
 gi|291606631|gb|EFF36026.1| transcriptional regulator, ArsR family [Enterococcus faecium 
E1162]
Length=97

 Score = 80.9 bits (198),  Expect = 6e-14, Method: Compositional matrix adjust.
 Identities = 41/94 (44%), Positives = 63/94 (68%), Gaps = 2/94 (2%)

Query  16   DSQAAA--QVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRNL  73
            D+Q +   +V+   + L+ P+RL IL  L++G   VT + +A+ MEQSAVSHQLR+LR  
Sbjct  3    DTQKSKVEKVSQLFKMLSDPTRLKILLYLKDGEQNVTAITQAVEMEQSAVSHQLRLLREN  62

Query  74   GLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEH  107
             +V   R G++I+YSL D+HV  +L++ + H EH
Sbjct  63   HVVKSHREGKAILYSLDDSHVLDILNQTLKHVEH  96


>gi|227551979|ref|ZP_03982028.1| ArsR family transcriptional regulator [Enterococcus faecium TX1330]
 gi|227178884|gb|EEI59856.1| ArsR family transcriptional regulator [Enterococcus faecium TX1330]
Length=116

 Score = 80.5 bits (197),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 41/94 (44%), Positives = 62/94 (66%), Gaps = 2/94 (2%)

Query  16   DSQAAA--QVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRNL  73
            D+Q     +V+   + L+ P+RL IL  L++G   VT + +A+ MEQSAVSHQLR+LR  
Sbjct  22   DTQKTKVEKVSQLFKMLSDPTRLKILLYLKDGEQNVTAITQAVEMEQSAVSHQLRLLREN  81

Query  74   GLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEH  107
             +V   R G++I+YSL D+HV  +L++ + H EH
Sbjct  82   HVVKSHREGKAILYSLDDSHVLDILNQTLKHVEH  115


>gi|52080570|ref|YP_079361.1| DNA-binding protein [Bacillus licheniformis ATCC 14580]
 gi|52785949|ref|YP_091778.1| YozA [Bacillus licheniformis ATCC 14580]
 gi|319645466|ref|ZP_07999698.1| hypothetical protein HMPREF1012_00731 [Bacillus sp. BT1B_CT2]
 gi|52003781|gb|AAU23723.1| hypothetical DNA-binding protein [Bacillus licheniformis ATCC 
14580]
 gi|52348451|gb|AAU41085.1| YozA [Bacillus licheniformis ATCC 14580]
 gi|317392352|gb|EFV73147.1| hypothetical protein HMPREF1012_00731 [Bacillus sp. BT1B_CT2]
Length=110

 Score = 80.5 bits (197),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 43/95 (46%), Positives = 58/95 (62%), Gaps = 0/95 (0%)

Query  13   APLDSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRN  72
            A LD +    V+ T +AL+ P+R+ IL  L  G   V ++AE + + QS VSHQLR L+N
Sbjct  15   AELDEETLFLVSQTFKALSDPTRIKILHLLSQGEHSVNEIAEKLSLLQSTVSHQLRFLKN  74

Query  73   LGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEH  107
            L LV   RAG SI YS  D HV  +L + I H++H
Sbjct  75   LRLVKSRRAGTSIFYSPEDQHVLDVLQQMIDHTQH  109


>gi|257879919|ref|ZP_05659572.1| transcriptional regulator [Enterococcus faecium 1,230,933]
 gi|257884077|ref|ZP_05663730.1| transcriptional regulator [Enterococcus faecium 1,231,501]
 gi|257890434|ref|ZP_05670087.1| transcriptional regulator [Enterococcus faecium 1,231,410]
 11 more sequence titles
 Length=102

 Score = 80.5 bits (197),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 41/94 (44%), Positives = 63/94 (68%), Gaps = 2/94 (2%)

Query  16   DSQAAA--QVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQSAVSHQLRVLRNL  73
            D+Q +   +V+   + L+ P+RL IL  L++G   VT + +A+ MEQSAVSHQLR+LR  
Sbjct  8    DTQKSKVEKVSQLFKMLSDPTRLKILLYLKDGEQNVTAITQAVEMEQSAVSHQLRLLREN  67

Query  74   GLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEH  107
             +V   R G++I+YSL D+HV  +L++ + H EH
Sbjct  68   HVVKSHREGKAILYSLDDSHVLDILNQTLKHVEH  101


>gi|134098085|ref|YP_001103746.1| arsenical resistance operon repressor [Saccharopolyspora erythraea 
NRRL 2338]
 gi|291007456|ref|ZP_06565429.1| arsenical resistance operon repressor [Saccharopolyspora erythraea 
NRRL 2338]
 gi|133910708|emb|CAM00821.1| probable arsenical resistance operon repressor [Saccharopolyspora 
erythraea NRRL 2338]
Length=160

 Score = 80.5 bits (197),  Expect = 7e-14, Method: Compositional matrix adjust.
 Identities = 45/107 (43%), Positives = 65/107 (61%), Gaps = 1/107 (0%)

Query  3    HGVEGRNRPSAPL-DSQAAAQVASTLQALATPSRLMILTQLRNGPLPVTDLAEAIGMEQS  61
            H  E R R   PL D Q   +    L+ALA P R+ I+ QLR+G   V +L EA+G+ Q 
Sbjct  30   HSPERRTRRPVPLRDQQILVEAGELLRALAAPVRIAIVLQLRSGERCVHELVEALGVTQP  89

Query  62   AVSHQLRVLRNLGLVVGDRAGRSIVYSLYDTHVAQLLDEAIYHSEHL  108
             +S  LRVL++ G+V G+R GR +VY L D H+A ++ +A  H+E +
Sbjct  90   LISQHLRVLKSAGVVHGERHGREVVYRLVDEHLAHIVVDAAAHAEEI  136



Lambda     K      H
   0.317    0.132    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 128530997826


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40