BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3752c
Length=152
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610888|ref|NP_218269.1| cytidine/deoxycytidylate deaminase ... 290 4e-77
gi|254233244|ref|ZP_04926570.1| hypothetical protein TBCG_03677 ... 290 5e-77
gi|342859997|ref|ZP_08716649.1| hypothetical protein MCOL_13995 ... 268 1e-70
gi|254822445|ref|ZP_05227446.1| hypothetical protein MintA_21101... 268 2e-70
gi|15828339|ref|NP_302602.1| cytidine/deoxycytidylate deaminase ... 265 2e-69
gi|296166870|ref|ZP_06849287.1| tRNA-specific adenosine deaminas... 261 3e-68
gi|41406377|ref|NP_959213.1| hypothetical protein MAP0279 [Mycob... 261 3e-68
gi|118464690|ref|YP_879612.1| cytidine and deoxycytidylate deami... 257 4e-67
gi|183985263|ref|YP_001853554.1| cytidine/deoxycytidylate deamin... 252 1e-65
gi|118619510|ref|YP_907842.1| cytidine/deoxycytidylate deaminase... 251 2e-65
gi|145221806|ref|YP_001132484.1| zinc-binding CMP/dCMP deaminase... 244 4e-63
gi|118468323|ref|YP_890544.1| cytidine and deoxycytidylate deami... 243 9e-63
gi|240168511|ref|ZP_04747170.1| hypothetical protein MkanA1_0431... 236 8e-61
gi|120406536|ref|YP_956365.1| CMP/dCMP deaminase [Mycobacterium ... 229 8e-59
gi|108801923|ref|YP_642120.1| tRNA-adenosine deaminase [Mycobact... 229 1e-58
gi|169627373|ref|YP_001701022.1| cytidine/deoxycytidylate deamin... 226 1e-57
gi|333992673|ref|YP_004525287.1| cytidine/deoxycytidylate deamin... 221 3e-56
gi|54022202|ref|YP_116444.1| putative cytidine/deoxycytidylate d... 218 2e-55
gi|229492640|ref|ZP_04386443.1| tRNA-specific adenosine deaminas... 216 1e-54
gi|312137792|ref|YP_004005128.1| cmp/dcmp deaminase [Rhodococcus... 213 1e-53
gi|134096850|ref|YP_001102511.1| CMP/dCMP deaminase, zinc-bindin... 212 1e-53
gi|226363496|ref|YP_002781278.1| tRNA-specific adenosine deamina... 206 8e-52
gi|302530974|ref|ZP_07283316.1| cytidine and deoxycytidylate dea... 204 3e-51
gi|300790762|ref|YP_003771053.1| cytidine and deoxycytidylate de... 204 3e-51
gi|226303819|ref|YP_002763777.1| tRNA-specific adenosine deamina... 201 4e-50
gi|257057632|ref|YP_003135464.1| tRNA-adenosine deaminase [Sacch... 201 4e-50
gi|343926152|ref|ZP_08765661.1| tRNA-specific adenosine deaminas... 198 2e-49
gi|296392969|ref|YP_003657853.1| CMP/dCMP deaminase zinc-binding... 194 4e-48
gi|111021134|ref|YP_704106.1| tRNA-specific adenosine deaminase ... 193 6e-48
gi|324998977|ref|ZP_08120089.1| cytidine/deoxycytidylate deamina... 189 2e-46
gi|317507917|ref|ZP_07965613.1| cytidine and deoxycytidylate dea... 189 2e-46
gi|291303426|ref|YP_003514704.1| zinc-binding CMP/dCMP deaminase... 186 1e-45
gi|319948568|ref|ZP_08022697.1| cytidine and deoxycytidylate dea... 185 2e-45
gi|159035903|ref|YP_001535156.1| zinc-binding CMP/dCMP deaminase... 184 5e-45
gi|284989070|ref|YP_003407624.1| CMP/dCMP deaminase protein [Geo... 183 6e-45
gi|296141715|ref|YP_003648958.1| CMP/dCMP deaminase zinc-binding... 181 4e-44
gi|145592768|ref|YP_001157065.1| CMP/dCMP deaminase, zinc-bindin... 179 2e-43
gi|238061540|ref|ZP_04606249.1| CMP/dCMP deaminase [Micromonospo... 175 2e-42
gi|345016302|ref|YP_004818656.1| zinc-binding CMP/dCMP deaminase... 175 2e-42
gi|331694222|ref|YP_004330461.1| CMP/dCMP deaminase zinc-binding... 175 3e-42
gi|256374328|ref|YP_003097988.1| zinc-binding CMP/dCMP deaminase... 174 3e-42
gi|182437330|ref|YP_001825049.1| putative deaminase [Streptomyce... 174 5e-42
gi|302870406|ref|YP_003839043.1| CMP/dCMP deaminase [Micromonosp... 173 8e-42
gi|345000979|ref|YP_004803833.1| zinc-binding CMP/dCMP deaminase... 173 9e-42
gi|291446287|ref|ZP_06585677.1| deaminase [Streptomyces roseospo... 172 1e-41
gi|311897119|dbj|BAJ29527.1| putative deaminase [Kitasatospora s... 172 2e-41
gi|239989276|ref|ZP_04709940.1| putative deaminase [Streptomyces... 171 3e-41
gi|330470612|ref|YP_004408355.1| CMP/dCMP deaminase [Verrucosisp... 170 7e-41
gi|297158628|gb|ADI08340.1| cytidine/deoxycytidine deaminase [St... 170 7e-41
gi|312200616|ref|YP_004020677.1| CMP/dCMP deaminase zinc-binding... 169 1e-40
>gi|15610888|ref|NP_218269.1| cytidine/deoxycytidylate deaminase [Mycobacterium tuberculosis
H37Rv]
gi|15843372|ref|NP_338409.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium
tuberculosis CDC1551]
gi|31794922|ref|NP_857415.1| cytidine/deoxycytidylate deaminase [Mycobacterium bovis AF2122/97]
76 more sequence titles
Length=152
Score = 290 bits (743), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 151/152 (99%), Positives = 152/152 (100%), Gaps = 0/152 (0%)
Query 1 VTTDEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMR 60
+TTDEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMR
Sbjct 1 MTTDEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMR 60
Query 61 LAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRD 120
LAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRD
Sbjct 61 LAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRD 120
Query 121 RRLNHRPEVRGGVLARECAAPLEAFFARQRLG 152
RRLNHRPEVRGGVLARECAAPLEAFFARQRLG
Sbjct 121 RRLNHRPEVRGGVLARECAAPLEAFFARQRLG 152
>gi|254233244|ref|ZP_04926570.1| hypothetical protein TBCG_03677 [Mycobacterium tuberculosis C]
gi|124603037|gb|EAY61312.1| hypothetical protein TBCG_03677 [Mycobacterium tuberculosis C]
Length=152
Score = 290 bits (742), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 150/152 (99%), Positives = 152/152 (100%), Gaps = 0/152 (0%)
Query 1 VTTDEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMR 60
+TTDEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMR
Sbjct 1 MTTDEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMR 60
Query 61 LAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRD 120
LAAGVLGDGWRLEGTTLAVTVEPCTMCAGALV+ARVARLVFGAWEPKTGAVGSLWDVVRD
Sbjct 61 LAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVMARVARLVFGAWEPKTGAVGSLWDVVRD 120
Query 121 RRLNHRPEVRGGVLARECAAPLEAFFARQRLG 152
RRLNHRPEVRGGVLARECAAPLEAFFARQRLG
Sbjct 121 RRLNHRPEVRGGVLARECAAPLEAFFARQRLG 152
>gi|342859997|ref|ZP_08716649.1| hypothetical protein MCOL_13995 [Mycobacterium colombiense CECT
3035]
gi|342132375|gb|EGT85604.1| hypothetical protein MCOL_13995 [Mycobacterium colombiense CECT
3035]
Length=152
Score = 268 bits (686), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/150 (91%), Positives = 145/150 (97%), Gaps = 0/150 (0%)
Query 3 TDEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLA 62
+DEDLIR+AL+VAATAGPRDVP+GAVVVGADGTELARAVNAREA GDPTAHAEI+A+R A
Sbjct 3 SDEDLIRSALSVAATAGPRDVPIGAVVVGADGTELARAVNAREAWGDPTAHAEIVALRAA 62
Query 63 AGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRR 122
A VLGDGWRLEG TLAVTVEPCTMCAGALVL+R+ARLVFGAWEPKTGAVGSLWDVVRD R
Sbjct 63 AQVLGDGWRLEGATLAVTVEPCTMCAGALVLSRIARLVFGAWEPKTGAVGSLWDVVRDGR 122
Query 123 LNHRPEVRGGVLARECAAPLEAFFARQRLG 152
LNHRPEVRGGVLA+ECAAPLEAFFARQRLG
Sbjct 123 LNHRPEVRGGVLAQECAAPLEAFFARQRLG 152
>gi|254822445|ref|ZP_05227446.1| hypothetical protein MintA_21101 [Mycobacterium intracellulare
ATCC 13950]
Length=152
Score = 268 bits (686), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/149 (91%), Positives = 143/149 (96%), Gaps = 0/149 (0%)
Query 4 DEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAA 63
DE LIR+AL+VAATAGPRDVP+GAVV+ ADGTELARAVNAREALGDPTAHAEILA+R AA
Sbjct 4 DEQLIRSALSVAATAGPRDVPIGAVVISADGTELARAVNAREALGDPTAHAEILALRAAA 63
Query 64 GVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRL 123
VLGDGWRLEG TLAVTVEPCTMCAGALVL+R+ RLVFGAWEPKTGAVGSLWDVVRDRRL
Sbjct 64 EVLGDGWRLEGATLAVTVEPCTMCAGALVLSRIGRLVFGAWEPKTGAVGSLWDVVRDRRL 123
Query 124 NHRPEVRGGVLARECAAPLEAFFARQRLG 152
NHRPEVRGGVLA+ECAAPLEAFFARQRLG
Sbjct 124 NHRPEVRGGVLAQECAAPLEAFFARQRLG 152
>gi|15828339|ref|NP_302602.1| cytidine/deoxycytidylate deaminase [Mycobacterium leprae TN]
gi|221230816|ref|YP_002504232.1| putative cytidine/deoxycytidylate deaminase [Mycobacterium leprae
Br4923]
gi|13094032|emb|CAC31991.1| possible cytidine/deoxycytidylate deaminase [Mycobacterium leprae]
gi|219933923|emb|CAR72573.1| possible cytidine/deoxycytidylate deaminase [Mycobacterium leprae
Br4923]
Length=171
Score = 265 bits (677), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/151 (89%), Positives = 140/151 (93%), Gaps = 0/151 (0%)
Query 1 VTTDEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMR 60
VTTDEDLIRAAL VA TAG RDVP+GAVV+GADG ELARAVNAREA+GDPTAHAEILAMR
Sbjct 14 VTTDEDLIRAALTVATTAGSRDVPIGAVVLGADGNELARAVNAREAIGDPTAHAEILAMR 73
Query 61 LAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRD 120
AAG LG+GWRLEGTTLAVTVEPCTMCAGALVLAR+ RLVFGAW+PKTGAVGSLWDVVRD
Sbjct 74 AAAGTLGNGWRLEGTTLAVTVEPCTMCAGALVLARIERLVFGAWQPKTGAVGSLWDVVRD 133
Query 121 RRLNHRPEVRGGVLARECAAPLEAFFARQRL 151
RLNHRP VRGGVLA+EC APLEAFFA QRL
Sbjct 134 HRLNHRPAVRGGVLAQECTAPLEAFFAHQRL 164
>gi|296166870|ref|ZP_06849287.1| tRNA-specific adenosine deaminase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897747|gb|EFG77336.1| tRNA-specific adenosine deaminase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=152
Score = 261 bits (667), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/149 (96%), Positives = 144/149 (97%), Gaps = 0/149 (0%)
Query 4 DEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAA 63
DEDLIRAALAVAA AGPRDVP+GAVVVGADGTELARAVNAREALGDPTAHAEILA+R AA
Sbjct 4 DEDLIRAALAVAAAAGPRDVPIGAVVVGADGTELARAVNAREALGDPTAHAEILALRAAA 63
Query 64 GVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRL 123
GVLGDGWRLEG TLAVTVEPCTMCAGALVLARV RLVFGAWEPKTGAVGSLWDVVRDRRL
Sbjct 64 GVLGDGWRLEGATLAVTVEPCTMCAGALVLARVGRLVFGAWEPKTGAVGSLWDVVRDRRL 123
Query 124 NHRPEVRGGVLARECAAPLEAFFARQRLG 152
NHRPEVRGGVLA ECAAPLEAFFARQRLG
Sbjct 124 NHRPEVRGGVLAEECAAPLEAFFARQRLG 152
>gi|41406377|ref|NP_959213.1| hypothetical protein MAP0279 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394725|gb|AAS02596.1| hypothetical protein MAP_0279 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336460001|gb|EGO38911.1| cytosine/adenosine deaminase [Mycobacterium avium subsp. paratuberculosis
S397]
Length=152
Score = 261 bits (666), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/152 (92%), Positives = 145/152 (96%), Gaps = 0/152 (0%)
Query 1 VTTDEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMR 60
+ +DEDLIR+ALAVAATAGPRDVP+GAVVVGADGTELARAVNAREALGDPTAHAEILA+R
Sbjct 1 MISDEDLIRSALAVAATAGPRDVPIGAVVVGADGTELARAVNAREALGDPTAHAEILALR 60
Query 61 LAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRD 120
AA LGDGWRLEG TLAVTVEPCTMCAGALVLAR+ARLVFGAWEPKTGAVGSLWDVVRD
Sbjct 61 AAAAALGDGWRLEGATLAVTVEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVRD 120
Query 121 RRLNHRPEVRGGVLARECAAPLEAFFARQRLG 152
RRLNHRPEVRGGVL RECAAPLE FFARQRLG
Sbjct 121 RRLNHRPEVRGGVLERECAAPLEGFFARQRLG 152
>gi|118464690|ref|YP_879612.1| cytidine and deoxycytidylate deaminase [Mycobacterium avium 104]
gi|254773334|ref|ZP_05214850.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium
avium subsp. avium ATCC 25291]
gi|118165977|gb|ABK66874.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium
avium 104]
Length=152
Score = 257 bits (657), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 138/152 (91%), Positives = 144/152 (95%), Gaps = 0/152 (0%)
Query 1 VTTDEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMR 60
+ +DEDLIR+ALAVAATAGPRDVP+GAVVVGADGTELARAVNAREALGDPTAHAEILA+R
Sbjct 1 MISDEDLIRSALAVAATAGPRDVPIGAVVVGADGTELARAVNAREALGDPTAHAEILALR 60
Query 61 LAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRD 120
AA LGDGWRLEG TLAVTVEPCTMCAGALVLAR+ARLVFGAWEPKTGAVGSLWDVVRD
Sbjct 61 AAAAALGDGWRLEGATLAVTVEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVRD 120
Query 121 RRLNHRPEVRGGVLARECAAPLEAFFARQRLG 152
RRLNHRPEVRGGVL RECAA LE FFARQRLG
Sbjct 121 RRLNHRPEVRGGVLERECAALLEGFFARQRLG 152
>gi|183985263|ref|YP_001853554.1| cytidine/deoxycytidylate deaminase [Mycobacterium marinum M]
gi|183178589|gb|ACC43699.1| cytidine/deoxycytidylate deaminase [Mycobacterium marinum M]
Length=152
Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/152 (89%), Positives = 142/152 (94%), Gaps = 0/152 (0%)
Query 1 VTTDEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMR 60
+ DEDL+RAALA AATAGPRDVP+GAVV+ ADGTELARAVNARE LGDPTAHAEILA+R
Sbjct 1 MIADEDLVRAALAAAATAGPRDVPIGAVVISADGTELARAVNAREELGDPTAHAEILALR 60
Query 61 LAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRD 120
AA VLGDGWRLEG TLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRD
Sbjct 61 AAARVLGDGWRLEGATLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRD 120
Query 121 RRLNHRPEVRGGVLARECAAPLEAFFARQRLG 152
RRLNHRP+VRGGVLA+ECAAPLE FF RQRLG
Sbjct 121 RRLNHRPQVRGGVLAQECAAPLEEFFGRQRLG 152
>gi|118619510|ref|YP_907842.1| cytidine/deoxycytidylate deaminase [Mycobacterium ulcerans Agy99]
gi|118571620|gb|ABL06371.1| cytidine/deoxycytidylate deaminase [Mycobacterium ulcerans Agy99]
Length=152
Score = 251 bits (642), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/152 (89%), Positives = 142/152 (94%), Gaps = 0/152 (0%)
Query 1 VTTDEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMR 60
+ DEDL+RAALA AATAGPRDVP+GAV++ ADGTELARAVNARE LGDPTAHAEILA+R
Sbjct 1 MIADEDLVRAALAAAATAGPRDVPIGAVMISADGTELARAVNAREELGDPTAHAEILALR 60
Query 61 LAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRD 120
AA VLGDGWRLEG TLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRD
Sbjct 61 AAARVLGDGWRLEGATLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRD 120
Query 121 RRLNHRPEVRGGVLARECAAPLEAFFARQRLG 152
RRLNHRP+VRGGVLA+ECAAPLE FF RQRLG
Sbjct 121 RRLNHRPQVRGGVLAQECAAPLEEFFGRQRLG 152
>gi|145221806|ref|YP_001132484.1| zinc-binding CMP/dCMP deaminase [Mycobacterium gilvum PYR-GCK]
gi|315446457|ref|YP_004079336.1| tRNA-adenosine deaminase [Mycobacterium sp. Spyr1]
gi|145214292|gb|ABP43696.1| tRNA-adenosine deaminase [Mycobacterium gilvum PYR-GCK]
gi|315264760|gb|ADU01502.1| tRNA-adenosine deaminase [Mycobacterium sp. Spyr1]
Length=149
Score = 244 bits (622), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 126/148 (86%), Positives = 132/148 (90%), Gaps = 0/148 (0%)
Query 3 TDEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLA 62
TDEDLIRAAL A AGPRDVP+GAVV A+GTELARA NARE LGDPTAHAEILA+R A
Sbjct 2 TDEDLIRAALDAARGAGPRDVPIGAVVFDAEGTELARAANAREELGDPTAHAEILALRAA 61
Query 63 AGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRR 122
A V GDGWRLEG TLAVTVEPCTMCAGALV+ARVAR+VFGAWEPKTGAVGSLWDVVRDRR
Sbjct 62 ALVHGDGWRLEGATLAVTVEPCTMCAGALVMARVARVVFGAWEPKTGAVGSLWDVVRDRR 121
Query 123 LNHRPEVRGGVLARECAAPLEAFFARQR 150
L HRP+VRGGVL ECAAPLE FFARQR
Sbjct 122 LTHRPQVRGGVLEAECAAPLEEFFARQR 149
>gi|118468323|ref|YP_890544.1| cytidine and deoxycytidylate deaminase [Mycobacterium smegmatis
str. MC2 155]
gi|118169610|gb|ABK70506.1| cytidine and deoxycytidylate deaminase family protein [Mycobacterium
smegmatis str. MC2 155]
Length=149
Score = 243 bits (619), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 126/148 (86%), Positives = 129/148 (88%), Gaps = 0/148 (0%)
Query 3 TDEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLA 62
T E IRAAL A TAGPRDVP+GAVV ADGTELARAVN REA GDP HAEI+AMR A
Sbjct 2 TPESQIRAALEAARTAGPRDVPIGAVVYAADGTELARAVNVREAYGDPAGHAEIVAMRAA 61
Query 63 AGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRR 122
A VLGDGWRLEG TLAVTVEPCTMCAGALVLARV+RLVFGAWEPKTGAVGSLWDVVRDRR
Sbjct 62 AKVLGDGWRLEGATLAVTVEPCTMCAGALVLARVSRLVFGAWEPKTGAVGSLWDVVRDRR 121
Query 123 LNHRPEVRGGVLARECAAPLEAFFARQR 150
LNHRPEV GGVLA ECAA LE FFARQR
Sbjct 122 LNHRPEVIGGVLADECAALLEEFFARQR 149
>gi|240168511|ref|ZP_04747170.1| hypothetical protein MkanA1_04312 [Mycobacterium kansasii ATCC
12478]
Length=152
Score = 236 bits (602), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 139/149 (94%), Positives = 145/149 (98%), Gaps = 0/149 (0%)
Query 4 DEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAA 63
DE+LIRAALAVAATAGPRDVP+GAVVVGADGTEL+RAVNAREALGDPTAHAEILA+R AA
Sbjct 4 DEELIRAALAVAATAGPRDVPIGAVVVGADGTELSRAVNAREALGDPTAHAEILALRAAA 63
Query 64 GVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRL 123
VLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRL
Sbjct 64 AVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRL 123
Query 124 NHRPEVRGGVLARECAAPLEAFFARQRLG 152
NHRP+VRGGVLA +CAAPLE FFARQRLG
Sbjct 124 NHRPQVRGGVLAADCAAPLEGFFARQRLG 152
>gi|120406536|ref|YP_956365.1| CMP/dCMP deaminase [Mycobacterium vanbaalenii PYR-1]
gi|119959354|gb|ABM16359.1| tRNA-adenosine deaminase [Mycobacterium vanbaalenii PYR-1]
Length=166
Score = 229 bits (585), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 122/148 (83%), Positives = 128/148 (87%), Gaps = 0/148 (0%)
Query 3 TDEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLA 62
TDE+LIRAAL A AGPRDVP+GAVV DG ELARA NARE GDPTAHAEILA+R A
Sbjct 19 TDEELIRAALDAARLAGPRDVPIGAVVFAPDGRELARAANAREEFGDPTAHAEILALRAA 78
Query 63 AGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRR 122
A LGDGWRLEG TLAVTVEPCTMCAGALV+ARVAR+VFGAWEPKTGAVGSLWDVVRDRR
Sbjct 79 ARELGDGWRLEGATLAVTVEPCTMCAGALVMARVARVVFGAWEPKTGAVGSLWDVVRDRR 138
Query 123 LNHRPEVRGGVLARECAAPLEAFFARQR 150
L HRP+VRGGVL ECAAPLE FFA QR
Sbjct 139 LTHRPQVRGGVLEAECAAPLEEFFAGQR 166
>gi|108801923|ref|YP_642120.1| tRNA-adenosine deaminase [Mycobacterium sp. MCS]
gi|119871075|ref|YP_941027.1| tRNA-adenosine deaminase [Mycobacterium sp. KMS]
gi|126437904|ref|YP_001073595.1| tRNA-adenosine deaminase [Mycobacterium sp. JLS]
gi|108772342|gb|ABG11064.1| tRNA-adenosine deaminase [Mycobacterium sp. MCS]
gi|119697164|gb|ABL94237.1| tRNA-adenosine deaminase [Mycobacterium sp. KMS]
gi|126237704|gb|ABO01105.1| tRNA-adenosine deaminase [Mycobacterium sp. JLS]
Length=150
Score = 229 bits (584), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/150 (88%), Positives = 138/150 (92%), Gaps = 0/150 (0%)
Query 1 VTTDEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMR 60
+T+DE LIRAAL AA AGPRDVP+GAVV G DGTELARA NAREALGDPTAHAE+LA+R
Sbjct 1 MTSDESLIRAALDAAALAGPRDVPIGAVVFGPDGTELARAANAREALGDPTAHAEVLALR 60
Query 61 LAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRD 120
AA VLGDGWRLEGTTLAVTVEPCTMCAGALVLARVAR+VFGAWEPKTGAVGSLWDVVRD
Sbjct 61 AAAAVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARVVFGAWEPKTGAVGSLWDVVRD 120
Query 121 RRLNHRPEVRGGVLARECAAPLEAFFARQR 150
RRLNHRP VRGGVLA ECA PLEAFFARQR
Sbjct 121 RRLNHRPGVRGGVLADECAKPLEAFFARQR 150
>gi|169627373|ref|YP_001701022.1| cytidine/deoxycytidylate deaminase family protein [Mycobacterium
abscessus ATCC 19977]
gi|169239340|emb|CAM60368.1| Cytidine/deoxycytidylate deaminase family protein [Mycobacterium
abscessus]
Length=152
Score = 226 bits (575), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/147 (80%), Positives = 124/147 (85%), Gaps = 0/147 (0%)
Query 4 DEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAA 63
DE LIRAAL A AG +DVP+GAV+ ADGTELARA NARE LGDPTAHAE+LA+R AA
Sbjct 6 DEALIRAALVAAREAGSQDVPIGAVIYAADGTELARAANARERLGDPTAHAEVLALRAAA 65
Query 64 GVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRL 123
GDGWRLEG TLAVTVEPCTMCAGALVLARV R+VFGAWEPKTGAVGSLWDVVRDRR
Sbjct 66 AKHGDGWRLEGATLAVTVEPCTMCAGALVLARVGRVVFGAWEPKTGAVGSLWDVVRDRRQ 125
Query 124 NHRPEVRGGVLARECAAPLEAFFARQR 150
HRPEVRGGVL ECAA LE FFA +R
Sbjct 126 AHRPEVRGGVLEHECAALLERFFAAKR 152
>gi|333992673|ref|YP_004525287.1| cytidine/deoxycytidylate deaminase [Mycobacterium sp. JDM601]
gi|333488641|gb|AEF38033.1| cytidine/deoxycytidylate deaminase [Mycobacterium sp. JDM601]
Length=155
Score = 221 bits (563), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/149 (89%), Positives = 136/149 (92%), Gaps = 0/149 (0%)
Query 4 DEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAA 63
DEDLIRAALA A AGPRDVPVGAVVVG DG LARA NAREALGDPTAHAE+LA+R AA
Sbjct 7 DEDLIRAALAAAGQAGPRDVPVGAVVVGPDGIVLARAANAREALGDPTAHAELLAIREAA 66
Query 64 GVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRL 123
VLGDGWRL G TLAVT+EPCTMCAGALV ARVARLVFGA+EPKTGAVGSLWDVVRDRRL
Sbjct 67 AVLGDGWRLTGATLAVTLEPCTMCAGALVAARVARLVFGAFEPKTGAVGSLWDVVRDRRL 126
Query 124 NHRPEVRGGVLARECAAPLEAFFARQRLG 152
NHRPEVRGGVLA ECAAPLEAFFARQRLG
Sbjct 127 NHRPEVRGGVLAAECAAPLEAFFARQRLG 155
>gi|54022202|ref|YP_116444.1| putative cytidine/deoxycytidylate deaminase [Nocardia farcinica
IFM 10152]
gi|54013710|dbj|BAD55080.1| putative cytidine/deoxycytidylate deaminase [Nocardia farcinica
IFM 10152]
Length=159
Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/147 (80%), Positives = 122/147 (83%), Gaps = 0/147 (0%)
Query 4 DEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAA 63
DE +IR A+ AA A PRDVPVGAVV A G ELARA NAREA GDPTAHAEILA+R AA
Sbjct 13 DEAMIRVAIEAAAAADPRDVPVGAVVFDAQGRELARAANAREASGDPTAHAEILALRRAA 72
Query 64 GVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRL 123
V GDGWRL G TLAVT+EPCTMCAGALVLARV RLVFGAWEPKTGAVGSLWDVVRDRRL
Sbjct 73 QVHGDGWRLAGATLAVTLEPCTMCAGALVLARVDRLVFGAWEPKTGAVGSLWDVVRDRRL 132
Query 124 NHRPEVRGGVLARECAAPLEAFFARQR 150
NHRPEVRGGVL ECAA L+ FF R
Sbjct 133 NHRPEVRGGVLETECAALLDTFFRTHR 159
>gi|229492640|ref|ZP_04386443.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis SK121]
gi|229320626|gb|EEN86444.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis SK121]
Length=153
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/147 (75%), Positives = 121/147 (83%), Gaps = 0/147 (0%)
Query 4 DEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAA 63
D+ +IRAA+ A +A DVPVGAVV ADG E+ARA NAREA DPTAHAEILA+R AA
Sbjct 6 DQRMIRAAIVAARSASDADVPVGAVVFDADGVEVARASNAREASSDPTAHAEILALRAAA 65
Query 64 GVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRL 123
GDGWRLEG TLAVT+EPCTMCAGALVLARV+R+VFGAWEPKTGAVGSLWDVVRD+RL
Sbjct 66 KTYGDGWRLEGATLAVTLEPCTMCAGALVLARVSRVVFGAWEPKTGAVGSLWDVVRDKRL 125
Query 124 NHRPEVRGGVLARECAAPLEAFFARQR 150
+RP+VRGGVL ECA LE FF QR
Sbjct 126 TYRPQVRGGVLEDECAGLLEDFFREQR 152
>gi|312137792|ref|YP_004005128.1| cmp/dcmp deaminase [Rhodococcus equi 103S]
gi|325676107|ref|ZP_08155789.1| cytidine and deoxycytidylate deaminase [Rhodococcus equi ATCC
33707]
gi|311887131|emb|CBH46440.1| CMP/dCMP deaminase [Rhodococcus equi 103S]
gi|325553147|gb|EGD22827.1| cytidine and deoxycytidylate deaminase [Rhodococcus equi ATCC
33707]
Length=152
Score = 213 bits (541), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/150 (78%), Positives = 125/150 (84%), Gaps = 0/150 (0%)
Query 1 VTTDEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMR 60
+ DE +IRAAL+ AA A DVPVGAVV ADG ELARA NAREA GDPTAHAEILA+R
Sbjct 3 LQDDERMIRAALSAAAAASDVDVPVGAVVFDADGVELARAANAREATGDPTAHAEILALR 62
Query 61 LAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRD 120
AA V GDGWRLEG TLAVT+EPCTMCAGALVLARV R+VFGAWEPKTGAVGSLWDVVRD
Sbjct 63 AAARVHGDGWRLEGATLAVTLEPCTMCAGALVLARVERVVFGAWEPKTGAVGSLWDVVRD 122
Query 121 RRLNHRPEVRGGVLARECAAPLEAFFARQR 150
RRL HRP+VRGGVL ECA LE+FF QR
Sbjct 123 RRLTHRPQVRGGVLEGECAGILESFFQGQR 152
>gi|134096850|ref|YP_001102511.1| CMP/dCMP deaminase, zinc-binding [Saccharopolyspora erythraea
NRRL 2338]
gi|291005105|ref|ZP_06563078.1| CMP/dCMP deaminase, zinc-binding protein [Saccharopolyspora erythraea
NRRL 2338]
gi|133909473|emb|CAL99585.1| CMP/dCMP deaminase, zinc-binding [Saccharopolyspora erythraea
NRRL 2338]
Length=155
Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/148 (78%), Positives = 122/148 (83%), Gaps = 1/148 (0%)
Query 4 DEDLIRAALAVAATA-GPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLA 62
D +L+RAAL VA A DVP+GAVV G DG LAR N REAL DPTAHAEILA+R A
Sbjct 8 DTELVRAALEVAPGALSTGDVPIGAVVAGPDGRVLARDHNRREALHDPTAHAEILALRAA 67
Query 63 AGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRR 122
AGVLGDGWRLEG TLAVTVEPCTMCAGALVLARV R+VFG WEP+TGAVGSLWDVVRDRR
Sbjct 68 AGVLGDGWRLEGCTLAVTVEPCTMCAGALVLARVERVVFGCWEPRTGAVGSLWDVVRDRR 127
Query 123 LNHRPEVRGGVLARECAAPLEAFFARQR 150
LNHRPEV GGVL EC+A LEAFF QR
Sbjct 128 LNHRPEVVGGVLEAECSALLEAFFHGQR 155
>gi|226363496|ref|YP_002781278.1| tRNA-specific adenosine deaminase [Rhodococcus opacus B4]
gi|226241985|dbj|BAH52333.1| putative tRNA-specific adenosine deaminase [Rhodococcus opacus
B4]
Length=152
Score = 206 bits (524), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 101/129 (79%), Positives = 113/129 (88%), Gaps = 0/129 (0%)
Query 22 DVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTV 81
DVPVGAVV ADG E++RAVN+REA+ DPTAHAEI+A+R AA V GDGWRLEG TLAVT+
Sbjct 24 DVPVGAVVFDADGVEVSRAVNSREAMADPTAHAEIIALRAAARVYGDGWRLEGATLAVTL 83
Query 82 EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAP 141
EPCTMCAGALVLAR++R+VFGAWEPKTGAVGSLWDVVRDRRL HRP+VRGGVL ECA
Sbjct 84 EPCTMCAGALVLARISRVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVLEDECAGI 143
Query 142 LEAFFARQR 150
LE FF +R
Sbjct 144 LEDFFRERR 152
>gi|302530974|ref|ZP_07283316.1| cytidine and deoxycytidylate deaminase [Streptomyces sp. AA4]
gi|302439869|gb|EFL11685.1| cytidine and deoxycytidylate deaminase [Streptomyces sp. AA4]
Length=155
Score = 204 bits (520), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/149 (75%), Positives = 119/149 (80%), Gaps = 1/149 (0%)
Query 4 DEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAA 63
D + +RAAL A G DVP+GAVV DG LA A NAR L DPTAHAEILA+R AA
Sbjct 6 DTEAVRAALDAARAPGA-DVPIGAVVFDPDGRPLAAARNARVELADPTAHAEILALRAAA 64
Query 64 GVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRL 123
GDGWRLEG TLAVT+EPCTMCAGALVLARVARLVFGAWEPKTGAV SLWDVVRDRRL
Sbjct 65 REFGDGWRLEGCTLAVTLEPCTMCAGALVLARVARLVFGAWEPKTGAVSSLWDVVRDRRL 124
Query 124 NHRPEVRGGVLARECAAPLEAFFARQRLG 152
NHRPEV GGVL +CAA LEA+FA +RLG
Sbjct 125 NHRPEVHGGVLESDCAALLEAYFADRRLG 153
>gi|300790762|ref|YP_003771053.1| cytidine and deoxycytidylate deaminase family protein [Amycolatopsis
mediterranei U32]
gi|299800276|gb|ADJ50651.1| cytidine and deoxycytidylate deaminase family protein [Amycolatopsis
mediterranei U32]
gi|340532454|gb|AEK47659.1| cytidine and deoxycytidylate deaminase family protein [Amycolatopsis
mediterranei S699]
Length=142
Score = 204 bits (519), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 107/136 (79%), Positives = 114/136 (84%), Gaps = 0/136 (0%)
Query 15 AATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEG 74
AA A DVP+GAVV G DG LA A NAR LGDPTAHAEILA+R AA V+GDGWRLEG
Sbjct 7 AARAPGADVPIGAVVFGPDGVPLAAARNARIELGDPTAHAEILALRAAAQVVGDGWRLEG 66
Query 75 TTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVL 134
TLAVT+EPCTMCAGALVLAR+ARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEV GGVL
Sbjct 67 CTLAVTLEPCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVHGGVL 126
Query 135 ARECAAPLEAFFARQR 150
ECA LE +FA +R
Sbjct 127 LDECAGLLETYFAMRR 142
>gi|226303819|ref|YP_002763777.1| tRNA-specific adenosine deaminase [Rhodococcus erythropolis PR4]
gi|226182934|dbj|BAH31038.1| putative tRNA-specific adenosine deaminase [Rhodococcus erythropolis
PR4]
Length=153
Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/147 (75%), Positives = 122/147 (83%), Gaps = 0/147 (0%)
Query 4 DEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAA 63
D+ +IRAA+ A +A DVPVGAVV ADG E+ARA NAREA DPTAHAEILA+R AA
Sbjct 6 DQRMIRAAIVAARSASDADVPVGAVVFDADGVEVARAANAREAASDPTAHAEILALRAAA 65
Query 64 GVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRL 123
+ GDGWRLEG TLAVT+EPCTMCAGALVLARV+R+VFGAWEPKTGAVGSLWDVVRD+RL
Sbjct 66 KIYGDGWRLEGATLAVTLEPCTMCAGALVLARVSRVVFGAWEPKTGAVGSLWDVVRDKRL 125
Query 124 NHRPEVRGGVLARECAAPLEAFFARQR 150
+RP+VRGGVL ECA LE FF QR
Sbjct 126 TYRPQVRGGVLEDECAGLLEDFFREQR 152
>gi|257057632|ref|YP_003135464.1| tRNA-adenosine deaminase [Saccharomonospora viridis DSM 43017]
gi|256587504|gb|ACU98637.1| tRNA-adenosine deaminase [Saccharomonospora viridis DSM 43017]
Length=147
Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 110/146 (76%), Positives = 116/146 (80%), Gaps = 1/146 (0%)
Query 6 DLIRAALAVAATA-GPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAG 64
D +R AL A A G DVP+GA V DG LA A NARE LGDPTAHAE+LA+R AA
Sbjct 2 DAVRVALGFAERAVGTADVPIGAAVFSPDGRLLAGAHNARERLGDPTAHAEVLALREAAR 61
Query 65 VLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLN 124
V GDGWRLEG TLAVTVEPCTMCAGALVLARVAR+VFGAWEP+TGAV SLWDVVRDRRLN
Sbjct 62 VHGDGWRLEGCTLAVTVEPCTMCAGALVLARVARVVFGAWEPRTGAVCSLWDVVRDRRLN 121
Query 125 HRPEVRGGVLARECAAPLEAFFARQR 150
HRPEV GGVL ECAA L FFA QR
Sbjct 122 HRPEVVGGVLESECAALLNDFFADQR 147
>gi|343926152|ref|ZP_08765661.1| tRNA-specific adenosine deaminase [Gordonia alkanivorans NBRC
16433]
gi|343763781|dbj|GAA12587.1| tRNA-specific adenosine deaminase [Gordonia alkanivorans NBRC
16433]
Length=154
Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/146 (69%), Positives = 116/146 (80%), Gaps = 0/146 (0%)
Query 5 EDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAG 64
E+++RAAL A+ +G DVP+GAVV +G ELARA N REA GDPTAHAE+LA+R AA
Sbjct 7 ENMVRAALDAASLSGTDDVPIGAVVFDPEGVELARAANRREADGDPTAHAEVLALRAAAQ 66
Query 65 VLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLN 124
GDGWRL G T+AVTVEPCTMCAGA+ L+RV LVFGAWEPKTGAVGSLWDVVRD RL
Sbjct 67 AFGDGWRLPGCTIAVTVEPCTMCAGAITLSRVDALVFGAWEPKTGAVGSLWDVVRDPRLT 126
Query 125 HRPEVRGGVLARECAAPLEAFFARQR 150
HRP+V+GGVL EC A + FFA +R
Sbjct 127 HRPQVKGGVLEDECRALMVDFFATKR 152
>gi|296392969|ref|YP_003657853.1| CMP/dCMP deaminase zinc-binding protein [Segniliparus rotundus
DSM 44985]
gi|296180116|gb|ADG97022.1| CMP/dCMP deaminase zinc-binding protein [Segniliparus rotundus
DSM 44985]
Length=180
Score = 194 bits (493), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/147 (73%), Positives = 116/147 (79%), Gaps = 0/147 (0%)
Query 4 DEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAA 63
D L+R ALA A AG DVPVGAVV G DG ELARA NAREA GDPTAHAEILA+R AA
Sbjct 19 DAALMREALAAAGAAGELDVPVGAVVFGPDGKELARAANAREAFGDPTAHAEILALRQAA 78
Query 64 GVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRL 123
+LGDGWRL G TLAVT+EPCTMCAGA V AR+AR+VFGA EPKTGAVGSLWDVV D RL
Sbjct 79 AILGDGWRLIGCTLAVTLEPCTMCAGAAVNARIARIVFGAREPKTGAVGSLWDVVTDPRL 138
Query 124 NHRPEVRGGVLARECAAPLEAFFARQR 150
NHRP+VR GVL ECA +FF + R
Sbjct 139 NHRPQVRSGVLEAECAELTRSFFRKLR 165
>gi|111021134|ref|YP_704106.1| tRNA-specific adenosine deaminase [Rhodococcus jostii RHA1]
gi|110820664|gb|ABG95948.1| probable tRNA-specific adenosine deaminase [Rhodococcus jostii
RHA1]
Length=123
Score = 193 bits (491), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 94/123 (77%), Positives = 107/123 (87%), Gaps = 0/123 (0%)
Query 28 VVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTVEPCTMC 87
+V ADG E++RAVN+REA+ DPTAHAEI+A+R AA V GDGWRLEG TLAVT+EPCTMC
Sbjct 1 MVFDADGVEVSRAVNSREAMSDPTAHAEIIALRAAARVYGDGWRLEGATLAVTLEPCTMC 60
Query 88 AGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAPLEAFFA 147
AGALVLAR++R+VFGAWEPKTGAVGSLWDVVRDRRL HRP+VRGGVL ECA LE FF
Sbjct 61 AGALVLARISRVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVLEDECAGILEDFFR 120
Query 148 RQR 150
+R
Sbjct 121 ERR 123
>gi|324998977|ref|ZP_08120089.1| cytidine/deoxycytidylate deaminase [Pseudonocardia sp. P1]
Length=157
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/145 (72%), Positives = 114/145 (79%), Gaps = 1/145 (0%)
Query 4 DEDLIRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAA 63
D L RA A DVP+GAVV+ ADGTELA A NAREALGDPTAHAE+LA+R AA
Sbjct 7 DRALGRALEVARGAAASDDVPIGAVVLDADGTELAAACNAREALGDPTAHAEVLALRAAA 66
Query 64 GVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRL 123
V+G WRL GTTLAVTVEPCTMCAGA+ LARV R+VFGAWEPKTGA GSLWDV+RDRRL
Sbjct 67 RVVGS-WRLTGTTLAVTVEPCTMCAGAIGLARVERVVFGAWEPKTGAAGSLWDVLRDRRL 125
Query 124 NHRPEVRGGVLARECAAPLEAFFAR 148
+HRPEV GGV A E AA L+ FF R
Sbjct 126 SHRPEVVGGVRAGEAAALLQEFFGR 150
>gi|317507917|ref|ZP_07965613.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Segniliparus
rugosus ATCC BAA-974]
gi|316253782|gb|EFV13156.1| cytidine and deoxycytidylate deaminase zinc-binding protein [Segniliparus
rugosus ATCC BAA-974]
Length=166
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/132 (76%), Positives = 106/132 (81%), Gaps = 0/132 (0%)
Query 19 GPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLA 78
G DVPVGAVV G DG ELARA NAREALGDPTAHAEILA+R AA VLGDGWRL G TLA
Sbjct 25 GELDVPVGAVVFGPDGAELARAANAREALGDPTAHAEILALRQAAAVLGDGWRLVGCTLA 84
Query 79 VTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLAREC 138
VT+EPCTMCAGA V AR+ R+VFGA EPKTGAVGSLWDVV D RLNHRP VR GVL EC
Sbjct 85 VTLEPCTMCAGAAVNARIGRIVFGAREPKTGAVGSLWDVVTDPRLNHRPLVRPGVLEPEC 144
Query 139 AAPLEAFFARQR 150
A +FF + R
Sbjct 145 AELTRSFFRKLR 156
>gi|291303426|ref|YP_003514704.1| zinc-binding CMP/dCMP deaminase protein [Stackebrandtia nassauensis
DSM 44728]
gi|290572646|gb|ADD45611.1| CMP/dCMP deaminase zinc-binding protein [Stackebrandtia nassauensis
DSM 44728]
Length=144
Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/140 (70%), Positives = 109/140 (78%), Gaps = 1/140 (0%)
Query 8 IRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLG 67
+R ALAVAA +G DVP+GAVV DG ELA A N REA GDPTAHAE++A+R AA V G
Sbjct 1 MRRALAVAAESG-SDVPIGAVVYSPDGIELAAAHNLREATGDPTAHAELVALRRAAEVHG 59
Query 68 DGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRP 127
DGWRL L VTVEPCTMCAGA+ L+R+ +VFGAWEPKTGAVGSLWDVVRDRRL HRP
Sbjct 60 DGWRLSDCVLVVTVEPCTMCAGAITLSRIGTVVFGAWEPKTGAVGSLWDVVRDRRLAHRP 119
Query 128 EVRGGVLARECAAPLEAFFA 147
+V GVL ECAA L FF+
Sbjct 120 QVYSGVLEAECAALLRGFFS 139
>gi|319948568|ref|ZP_08022697.1| cytidine and deoxycytidylate deaminase family protein [Dietzia
cinnamea P4]
gi|319437767|gb|EFV92758.1| cytidine and deoxycytidylate deaminase family protein [Dietzia
cinnamea P4]
Length=143
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/143 (75%), Positives = 114/143 (80%), Gaps = 0/143 (0%)
Query 8 IRAALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLG 67
+R ALAVAA P DVPVGAVV+G DGTELA A N RE GDP AHAE+LA+R AA VLG
Sbjct 1 MRRALAVAAGTPPEDVPVGAVVIGPDGTELAAATNRRETDGDPFAHAEVLALREAARVLG 60
Query 68 DGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRP 127
DGWRLE TL VT+EPCTMCAGA V ARV R+VFGAWEP+TGA GSLWDVVRDRRL HRP
Sbjct 61 DGWRLEDCTLVVTLEPCTMCAGAAVAARVGRIVFGAWEPRTGACGSLWDVVRDRRLVHRP 120
Query 128 EVRGGVLARECAAPLEAFFARQR 150
EV GGVL ECAA LE FF +R
Sbjct 121 EVHGGVLEDECAAVLEDFFRARR 143
>gi|159035903|ref|YP_001535156.1| zinc-binding CMP/dCMP deaminase [Salinispora arenicola CNS-205]
gi|157914738|gb|ABV96165.1| CMP/dCMP deaminase zinc-binding [Salinispora arenicola CNS-205]
Length=165
Score = 184 bits (466), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/145 (72%), Positives = 114/145 (79%), Gaps = 7/145 (4%)
Query 8 IRAALAVAAT-AGPR-----DVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRL 61
+R AL VA T A P D+PVGAV++G DGTELA N RE GDPTAHAE+LA+R
Sbjct 21 MRRALEVAVTGADPTVTVVDDIPVGAVLLGPDGTELATGRNERELTGDPTAHAEVLALRR 80
Query 62 AAGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDR 121
AAG LG WRL+G TL VT+EPCTMCAGALVLARV+ +VFGAWEPKTGA GSLWDV+RDR
Sbjct 81 AAGRLGR-WRLDGCTLVVTLEPCTMCAGALVLARVSTVVFGAWEPKTGAAGSLWDVLRDR 139
Query 122 RLNHRPEVRGGVLARECAAPLEAFF 146
RLNHRPEV GGVLA E AA L AFF
Sbjct 140 RLNHRPEVYGGVLATETAAVLRAFF 164
>gi|284989070|ref|YP_003407624.1| CMP/dCMP deaminase protein [Geodermatophilus obscurus DSM 43160]
gi|284062315|gb|ADB73253.1| CMP/dCMP deaminase zinc-binding protein [Geodermatophilus obscurus
DSM 43160]
Length=154
Score = 183 bits (465), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/129 (73%), Positives = 103/129 (80%), Gaps = 0/129 (0%)
Query 22 DVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTV 81
D P+GAVV+G DGT LA A N RE GDPTAHAE+LA+R AA V GDGWRL GTTL VT+
Sbjct 24 DTPIGAVVLGPDGTVLAEAANEREKQGDPTAHAEVLALRAAARVHGDGWRLTGTTLVVTL 83
Query 82 EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAP 141
EPCTMCAGA VLARV R+V+GA +PK GA GSLWDVVRDRRLNHRP+V GGV A E A
Sbjct 84 EPCTMCAGASVLARVDRIVYGADDPKAGAAGSLWDVVRDRRLNHRPQVTGGVRAEESATL 143
Query 142 LEAFFARQR 150
L AFF RQR
Sbjct 144 LRAFFRRQR 152
>gi|296141715|ref|YP_003648958.1| CMP/dCMP deaminase zinc-binding protein [Tsukamurella paurometabola
DSM 20162]
gi|296029849|gb|ADG80619.1| CMP/dCMP deaminase zinc-binding protein [Tsukamurella paurometabola
DSM 20162]
Length=144
Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/140 (69%), Positives = 107/140 (77%), Gaps = 0/140 (0%)
Query 11 ALAVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGW 70
AL A +GP DVPVGAV++ DG LARA N REAL DPTAHAE+LA+R AA GDGW
Sbjct 4 ALEAAGLSGPDDVPVGAVILDPDGVVLARAGNRREALADPTAHAEVLAIREAATRFGDGW 63
Query 71 RLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVR 130
RL G TLAVT+EPC MCAGALV AR+ RLVFGA+EPKTGAVGS+WDVVRD R+ HR VR
Sbjct 64 RLGGCTLAVTLEPCAMCAGALVSARIERLVFGAYEPKTGAVGSVWDVVRDPRVTHRVSVR 123
Query 131 GGVLARECAAPLEAFFARQR 150
GG+ A EC A L FFA R
Sbjct 124 GGIRAGECGALLTDFFAPHR 143
>gi|145592768|ref|YP_001157065.1| CMP/dCMP deaminase, zinc-binding [Salinispora tropica CNB-440]
gi|145302105|gb|ABP52687.1| tRNA-adenosine deaminase [Salinispora tropica CNB-440]
Length=153
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/125 (74%), Positives = 103/125 (83%), Gaps = 1/125 (0%)
Query 22 DVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTV 81
D+PVGA+++G DG ELA N RE GDPTAHAE+LA+R AAG LG WRL+G TL VT+
Sbjct 29 DIPVGALLLGPDGAELATGRNERELTGDPTAHAEVLALRRAAGRLGR-WRLDGCTLVVTL 87
Query 82 EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAP 141
EPCTMCAGALVLARV+ +VFGAWEPKTGA GSLWDV+RDRRLNHRPEV GGVL E AA
Sbjct 88 EPCTMCAGALVLARVSTVVFGAWEPKTGAAGSLWDVLRDRRLNHRPEVYGGVLETETAAV 147
Query 142 LEAFF 146
L AFF
Sbjct 148 LRAFF 152
>gi|238061540|ref|ZP_04606249.1| CMP/dCMP deaminase [Micromonospora sp. ATCC 39149]
gi|237883351|gb|EEP72179.1| CMP/dCMP deaminase [Micromonospora sp. ATCC 39149]
Length=172
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/125 (72%), Positives = 101/125 (81%), Gaps = 1/125 (0%)
Query 22 DVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTV 81
DVPVGAV+ G DGTELA N RE GDPTAHAE+LA+R AA LG WRL+ TL VT+
Sbjct 48 DVPVGAVIYGPDGTELASGRNERELTGDPTAHAEVLALRRAAERLGR-WRLDDCTLVVTL 106
Query 82 EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAP 141
EPCTMCAGA+VLAR+A +VFGAWEPKTGA GSLWDV+RDRRLNHRPEV GG+L E +A
Sbjct 107 EPCTMCAGAIVLARIATVVFGAWEPKTGAAGSLWDVLRDRRLNHRPEVYGGLLEAENSAV 166
Query 142 LEAFF 146
L AFF
Sbjct 167 LRAFF 171
>gi|345016302|ref|YP_004818656.1| zinc-binding CMP/dCMP deaminase [Streptomyces violaceusniger
Tu 4113]
gi|344042651|gb|AEM88376.1| zinc-binding CMP/dCMP deaminase [Streptomyces violaceusniger
Tu 4113]
Length=166
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/128 (72%), Positives = 103/128 (81%), Gaps = 1/128 (0%)
Query 22 DVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTV 81
DVPVGAVV+G DG+ L R N REA GDPTAHAE+LA+R AA LG GWRL G TL VT+
Sbjct 40 DVPVGAVVLGPDGSVLGRGRNEREAHGDPTAHAEVLALRAAAHHLG-GWRLTGCTLVVTL 98
Query 82 EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAP 141
EPCTMCAGA+VL+R+ RLV+GA + K GAVGSLWDVVRDRRLNHRPEV GVLA CAAP
Sbjct 99 EPCTMCAGAIVLSRLNRLVYGAVDEKAGAVGSLWDVVRDRRLNHRPEVIAGVLAEACAAP 158
Query 142 LEAFFARQ 149
L AFF +
Sbjct 159 LTAFFRKS 166
>gi|331694222|ref|YP_004330461.1| CMP/dCMP deaminase zinc-binding protein [Pseudonocardia dioxanivorans
CB1190]
gi|326948911|gb|AEA22608.1| CMP/dCMP deaminase zinc-binding protein [Pseudonocardia dioxanivorans
CB1190]
Length=153
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/148 (73%), Positives = 119/148 (81%), Gaps = 2/148 (1%)
Query 4 DEDLIRAALAVAATA-GPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLA 62
DE L+R A+ VA A G DVP+GAVVV A G E+A A NAREALGDPTAHAEILA+R A
Sbjct 7 DERLVRRAIDVARGALGTGDVPIGAVVVDASGAEVATACNAREALGDPTAHAEILALRAA 66
Query 63 AGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRR 122
A VLG+ WRL G TL VT+EPCTMCAGA+ LARV R+VFGAWEP+TGA GSLWDV+RDRR
Sbjct 67 AAVLGE-WRLTGCTLVVTLEPCTMCAGAIWLARVPRVVFGAWEPRTGAAGSLWDVLRDRR 125
Query 123 LNHRPEVRGGVLARECAAPLEAFFARQR 150
LNHRPEV GGVLA ECAA LE FF R
Sbjct 126 LNHRPEVVGGVLADECAALLEDFFGELR 153
>gi|256374328|ref|YP_003097988.1| zinc-binding CMP/dCMP deaminase [Actinosynnema mirum DSM 43827]
gi|255918631|gb|ACU34142.1| CMP/dCMP deaminase zinc-binding [Actinosynnema mirum DSM 43827]
Length=160
Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/126 (78%), Positives = 104/126 (83%), Gaps = 0/126 (0%)
Query 22 DVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTV 81
D+P+GA V G DG ELARA NARE LGDPTAHAE+LA+R AA V GDGWRL G TLAVTV
Sbjct 23 DIPIGAAVFGPDGAELARACNARERLGDPTAHAEVLALRAAAAVFGDGWRLGGCTLAVTV 82
Query 82 EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAP 141
EPC MCAGALVLARV R+VFGAWEPKTGA GSLWDVVRDRRLNHR EV GGV ECAA
Sbjct 83 EPCAMCAGALVLARVDRVVFGAWEPKTGAAGSLWDVVRDRRLNHRAEVVGGVREAECAAL 142
Query 142 LEAFFA 147
+ FFA
Sbjct 143 MRDFFA 148
>gi|182437330|ref|YP_001825049.1| putative deaminase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326777951|ref|ZP_08237216.1| CMP/dCMP deaminase zinc-binding [Streptomyces cf. griseus XylebKG-1]
gi|178465846|dbj|BAG20366.1| putative deaminase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326658284|gb|EGE43130.1| CMP/dCMP deaminase zinc-binding [Streptomyces griseus XylebKG-1]
Length=142
Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/132 (72%), Positives = 105/132 (80%), Gaps = 3/132 (2%)
Query 15 AATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEG 74
AA+AG DVPVGAVV+G DGT LA A N REA GDPTAHAEILA+R AA G+ WRL G
Sbjct 11 AASAG--DVPVGAVVLGPDGTGLATAHNEREATGDPTAHAEILALRRAAEAHGE-WRLTG 67
Query 75 TTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVL 134
TL VT+EPCTMCAGALV +R+AR+V+GA + K GA GSLWDVVRDRRLNHRPEV GVL
Sbjct 68 CTLVVTLEPCTMCAGALVQSRIARVVYGARDEKAGAAGSLWDVVRDRRLNHRPEVIAGVL 127
Query 135 ARECAAPLEAFF 146
RECA L AFF
Sbjct 128 ERECAEQLTAFF 139
>gi|302870406|ref|YP_003839043.1| CMP/dCMP deaminase [Micromonospora aurantiaca ATCC 27029]
gi|302573265|gb|ADL49467.1| CMP/dCMP deaminase zinc-binding [Micromonospora aurantiaca ATCC
27029]
Length=210
Score = 173 bits (438), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/147 (67%), Positives = 109/147 (75%), Gaps = 9/147 (6%)
Query 8 IRAALAVAATA--GP------RDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAM 59
+R AL VA T GP DVPVGAV+ G DGTELA N RE GDPTAHAE+LA+
Sbjct 64 MRRALEVAVTGPDGPAADRDADDVPVGAVLYGPDGTELAIGRNERELTGDPTAHAEVLAL 123
Query 60 RLAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVR 119
R AA LG WRL+ TL VT+EPCTMCAGA+ LARV+ +VFGAWEPKTGAVGSLWDV+R
Sbjct 124 RRAAQRLGR-WRLDDCTLVVTLEPCTMCAGAIALARVSTVVFGAWEPKTGAVGSLWDVLR 182
Query 120 DRRLNHRPEVRGGVLARECAAPLEAFF 146
DRR+ HRPEV GGVL RE A L AFF
Sbjct 183 DRRVTHRPEVYGGVLERESATLLRAFF 209
>gi|345000979|ref|YP_004803833.1| zinc-binding CMP/dCMP deaminase protein [Streptomyces sp. SirexAA-E]
gi|344316605|gb|AEN11293.1| CMP/dCMP deaminase zinc-binding protein [Streptomyces sp. SirexAA-E]
Length=142
Score = 173 bits (438), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 97/138 (71%), Positives = 108/138 (79%), Gaps = 4/138 (2%)
Query 13 AVAATAGPRDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRL 72
A AA+AG DVPVGAVV+G DG LA N REA GDPTAHAE+LA+R AA VLG GWRL
Sbjct 9 AQAASAG--DVPVGAVVLGPDGAPLATGHNEREATGDPTAHAEVLALRRAASVLG-GWRL 65
Query 73 EGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGG 132
G TL VT+EPCTMCAGALV +RVAR+V+GA + K GA GSLWDV+RDRRLNHRPEV G
Sbjct 66 TGCTLVVTLEPCTMCAGALVQSRVARVVYGARDEKAGAAGSLWDVLRDRRLNHRPEVVYG 125
Query 133 VLARECAAPLEAFFARQR 150
VL CAA L AFF R+R
Sbjct 126 VLEETCAAQLTAFF-RER 142
>gi|291446287|ref|ZP_06585677.1| deaminase [Streptomyces roseosporus NRRL 15998]
gi|291349234|gb|EFE76138.1| deaminase [Streptomyces roseosporus NRRL 15998]
Length=142
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/125 (72%), Positives = 100/125 (80%), Gaps = 1/125 (0%)
Query 22 DVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTV 81
DVPVGAVV+G DGTELA N REA GDPTAHAEILA+R AA +G+ WRL TL VT+
Sbjct 16 DVPVGAVVLGPDGTELATGHNEREATGDPTAHAEILALRRAAEAVGE-WRLTDCTLVVTL 74
Query 82 EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAP 141
EPCTMCAGALV +RVAR+V+GA + K GA GSLWDV+RDRRLNHRPEV GVL RECA
Sbjct 75 EPCTMCAGALVQSRVARVVYGARDEKAGAAGSLWDVIRDRRLNHRPEVIAGVLERECAEQ 134
Query 142 LEAFF 146
L AFF
Sbjct 135 LTAFF 139
>gi|311897119|dbj|BAJ29527.1| putative deaminase [Kitasatospora setae KM-6054]
Length=179
Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/146 (65%), Positives = 111/146 (77%), Gaps = 2/146 (1%)
Query 6 DLIRAALAVAATAGPR-DVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAG 64
D +R A+ AA A DVPVGA V+G DGT L R N REA+GDPT HAE++A+R AA
Sbjct 35 DRMRLAIEEAALATATGDVPVGAFVLGPDGTVLGRGHNVREAVGDPTGHAEVVAIRAAAA 94
Query 65 VLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLN 124
+G+ WRL G TL VT+EPCTMCAGA+VL+R+AR+VFGA++PK GA GSL+DVVRD RLN
Sbjct 95 EVGE-WRLSGCTLVVTLEPCTMCAGAIVLSRLARVVFGAYDPKAGAAGSLFDVVRDNRLN 153
Query 125 HRPEVRGGVLARECAAPLEAFFARQR 150
HRPEV GGVLA C A L AFF QR
Sbjct 154 HRPEVIGGVLADACTAQLLAFFDTQR 179
>gi|239989276|ref|ZP_04709940.1| putative deaminase [Streptomyces roseosporus NRRL 11379]
Length=174
Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/125 (72%), Positives = 100/125 (80%), Gaps = 1/125 (0%)
Query 22 DVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTV 81
DVPVGAVV+G DGTELA N REA GDPTAHAEILA+R AA +G+ WRL TL VT+
Sbjct 48 DVPVGAVVLGPDGTELATGHNEREATGDPTAHAEILALRRAAEAVGE-WRLTDCTLVVTL 106
Query 82 EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAP 141
EPCTMCAGALV +RVAR+V+GA + K GA GSLWDV+RDRRLNHRPEV GVL RECA
Sbjct 107 EPCTMCAGALVQSRVARVVYGARDEKAGAAGSLWDVIRDRRLNHRPEVIAGVLERECAEQ 166
Query 142 LEAFF 146
L AFF
Sbjct 167 LTAFF 171
>gi|330470612|ref|YP_004408355.1| CMP/dCMP deaminase [Verrucosispora maris AB-18-032]
gi|328813583|gb|AEB47755.1| CMP/dCMP deaminase [Verrucosispora maris AB-18-032]
Length=200
Score = 170 bits (430), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/148 (65%), Positives = 107/148 (73%), Gaps = 11/148 (7%)
Query 8 IRAALAVAATAGP---------RDVPVGAVVVGADGTELARAVNAREALGDPTAHAEILA 58
+R AL VA T GP DVPVGAV+ G DG ELA N RE GDPTAHAE+LA
Sbjct 54 MRRALEVAVT-GPAVADPSGQADDVPVGAVLYGPDGDELAIGRNERELTGDPTAHAEVLA 112
Query 59 MRLAAGVLGDGWRLEGTTLAVTVEPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVV 118
+R A LG WRL+G L VT+EPCTMCAGALVL+RV+ +VFGAWEPKTGA GSLWDV+
Sbjct 113 LRRGAERLGR-WRLDGCILVVTLEPCTMCAGALVLSRVSTVVFGAWEPKTGAAGSLWDVL 171
Query 119 RDRRLNHRPEVRGGVLARECAAPLEAFF 146
RDRRLNHRPEV GGVLA E + AFF
Sbjct 172 RDRRLNHRPEVYGGVLATETGTVMRAFF 199
>gi|297158628|gb|ADI08340.1| cytidine/deoxycytidine deaminase [Streptomyces bingchenggensis
BCW-1]
Length=144
Score = 170 bits (430), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 91/129 (71%), Positives = 102/129 (80%), Gaps = 1/129 (0%)
Query 22 DVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTV 81
DVPVGAVV+G DG+ L N REA GDPTAHAE+LA+R AAG LG WRL G TL VT+
Sbjct 16 DVPVGAVVLGPDGSPLGHGRNEREAHGDPTAHAEVLALRDAAGRLGS-WRLTGCTLVVTL 74
Query 82 EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAP 141
EPCTMCAGA+VL+RV R+V+GA + K GAVGSLWDVVRDRRLNHRPEV GVLA +CAA
Sbjct 75 EPCTMCAGAIVLSRVDRVVYGATDDKAGAVGSLWDVVRDRRLNHRPEVVPGVLADQCAAL 134
Query 142 LEAFFARQR 150
L AFF R
Sbjct 135 LTAFFRAPR 143
>gi|312200616|ref|YP_004020677.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c]
gi|311231952|gb|ADP84807.1| CMP/dCMP deaminase zinc-binding protein [Frankia sp. EuI1c]
Length=198
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/129 (69%), Positives = 101/129 (79%), Gaps = 1/129 (0%)
Query 22 DVPVGAVVVGADGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTV 81
DVP+GAVV+GADGT L R N RE DPT HAEI+A+R AA +G+ WRL G TL VT+
Sbjct 61 DVPIGAVVIGADGTVLGRGHNIREVAADPTGHAEIVALRAAATAVGE-WRLTGATLVVTL 119
Query 82 EPCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVLARECAAP 141
EPCTMCAGALVLARV RLV+GA + K GAVGSLWDVVRDRRLNHRPEV GV A +C A
Sbjct 120 EPCTMCAGALVLARVDRLVYGAIDEKAGAVGSLWDVVRDRRLNHRPEVITGVAAPDCTAL 179
Query 142 LEAFFARQR 150
L+ FFA +R
Sbjct 180 LDTFFASRR 188
Lambda K H
0.322 0.136 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128332939266
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40