BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3753c
Length=166
Score E
Sequences producing significant alignments: (Bits) Value
gi|148824958|ref|YP_001289712.1| hypothetical protein TBFG_13785... 321 3e-86
gi|15843373|ref|NP_338410.1| hypothetical protein MT3860 [Mycoba... 320 6e-86
gi|31794923|ref|NP_857416.1| hypothetical protein Mb3779c [Mycob... 318 1e-85
gi|340628724|ref|YP_004747176.1| hypothetical protein MCAN_37731... 317 3e-85
gi|41406376|ref|NP_959212.1| hypothetical protein MAP0278 [Mycob... 297 3e-79
gi|118619511|ref|YP_907843.1| hypothetical protein MUL_4371 [Myc... 288 1e-76
gi|296166871|ref|ZP_06849288.1| conserved hypothetical protein [... 286 5e-76
gi|240168512|ref|ZP_04747171.1| hypothetical protein MkanA1_0431... 285 1e-75
gi|15828338|ref|NP_302601.1| hypothetical protein ML2473 [Mycoba... 277 3e-73
gi|120406537|ref|YP_956366.1| hypothetical protein Mvan_5595 [My... 268 2e-70
gi|108801924|ref|YP_642121.1| hypothetical protein Mmcs_4961 [My... 264 4e-69
gi|339296561|gb|AEJ48672.1| hypothetical protein CCDC5079_3483 [... 261 2e-68
gi|145221805|ref|YP_001132483.1| hypothetical protein Mflv_1213 ... 260 5e-68
gi|254822446|ref|ZP_05227447.1| hypothetical protein MintA_21106... 246 5e-64
gi|342859998|ref|ZP_08716650.1| hypothetical protein MCOL_14000 ... 244 3e-63
gi|118468314|ref|YP_890545.1| hypothetical protein MSMEG_6328 [M... 244 4e-63
gi|169627372|ref|YP_001701021.1| hypothetical protein MAB_0267 [... 224 5e-57
gi|54022201|ref|YP_116443.1| hypothetical protein nfa2370 [Nocar... 223 1e-56
gi|111021133|ref|YP_704105.1| hypothetical protein RHA1_ro04153 ... 207 4e-52
gi|343926153|ref|ZP_08765662.1| hypothetical protein GOALK_056_0... 204 2e-51
gi|326385120|ref|ZP_08206789.1| hypothetical protein SCNU_19340 ... 201 2e-50
gi|312137791|ref|YP_004005127.1| hypothetical protein REQ_02970 ... 201 4e-50
gi|226303818|ref|YP_002763776.1| hypothetical protein RER_03290 ... 200 6e-50
gi|333992674|ref|YP_004525288.1| hypothetical protein JDM601_403... 199 1e-49
gi|226363495|ref|YP_002781277.1| hypothetical protein ROP_40850 ... 193 6e-48
gi|262200336|ref|YP_003271544.1| hypothetical protein Gbro_0309 ... 191 4e-47
gi|333917872|ref|YP_004491453.1| hypothetical protein AS9A_0192 ... 186 9e-46
gi|296392970|ref|YP_003657854.1| hypothetical protein Srot_0539 ... 179 1e-43
gi|257057633|ref|YP_003135465.1| hypothetical protein Svir_36890... 169 2e-40
gi|317507918|ref|ZP_07965614.1| hypothetical protein HMPREF9336_... 167 3e-40
gi|258650783|ref|YP_003199939.1| hypothetical protein Namu_0533 ... 166 8e-40
gi|319948569|ref|ZP_08022698.1| hypothetical protein ES5_04306 [... 158 3e-37
gi|296141716|ref|YP_003648959.1| hypothetical protein Tpau_4049 ... 154 4e-36
gi|331694221|ref|YP_004330460.1| hypothetical protein Psed_0334 ... 154 4e-36
gi|324998976|ref|ZP_08120088.1| hypothetical protein PseP1_09438... 152 2e-35
gi|256374327|ref|YP_003097987.1| hypothetical protein Amir_0170 ... 150 5e-35
gi|340532455|gb|AEK47660.1| hypothetical protein RAM_45975 [Amyc... 149 1e-34
gi|300790763|ref|YP_003771054.1| hypothetical protein AMED_8962 ... 149 1e-34
gi|302530975|ref|ZP_07283317.1| predicted protein [Streptomyces ... 147 6e-34
gi|134096849|ref|YP_001102510.1| hypothetical protein SACE_0232 ... 145 2e-33
gi|291005106|ref|ZP_06563079.1| hypothetical protein SeryN2_1134... 145 2e-33
gi|68537119|ref|YP_251824.1| hypothetical protein jk2024 [Coryne... 133 8e-30
gi|260579467|ref|ZP_05847347.1| conserved hypothetical protein [... 132 2e-29
gi|145294346|ref|YP_001137167.1| hypothetical protein cgR_0301 [... 126 9e-28
gi|38232869|ref|NP_938636.1| hypothetical protein DIP0246 [Coryn... 126 1e-27
gi|19551478|ref|NP_599480.1| hypothetical protein NCgl0224 [Cory... 126 1e-27
gi|344045138|gb|EGV40811.1| hypothetical protein CgS9114_05612 [... 126 1e-27
gi|225020160|ref|ZP_03709352.1| hypothetical protein CORMATOL_00... 119 1e-25
gi|305679933|ref|ZP_07402743.1| putative tRNA adenosine deaminas... 119 1e-25
gi|336326644|ref|YP_004606610.1| hypothetical protein CRES_2093 ... 118 3e-25
>gi|148824958|ref|YP_001289712.1| hypothetical protein TBFG_13785 [Mycobacterium tuberculosis F11]
gi|253800800|ref|YP_003033801.1| hypothetical protein TBMG_03798 [Mycobacterium tuberculosis KZN
1435]
gi|254233245|ref|ZP_04926571.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
39 more sequence titles
Length=173
Score = 321 bits (822), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/166 (100%), Positives = 166/166 (100%), Gaps = 0/166 (0%)
Query 1 MQRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDD 60
MQRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDD
Sbjct 8 MQRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDD 67
Query 61 EFFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLS 120
EFFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLS
Sbjct 68 EFFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLS 127
Query 121 DIGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
DIGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR
Sbjct 128 DIGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 173
>gi|15843373|ref|NP_338410.1| hypothetical protein MT3860 [Mycobacterium tuberculosis CDC1551]
gi|148663619|ref|YP_001285142.1| hypothetical protein MRA_3791 [Mycobacterium tuberculosis H37Ra]
gi|167970914|ref|ZP_02553191.1| hypothetical protein MtubH3_23855 [Mycobacterium tuberculosis
H37Ra]
13 more sequence titles
Length=166
Score = 320 bits (819), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 166/166 (100%), Positives = 166/166 (100%), Gaps = 0/166 (0%)
Query 1 MQRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDD 60
MQRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDD
Sbjct 1 MQRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDD 60
Query 61 EFFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLS 120
EFFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLS
Sbjct 61 EFFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLS 120
Query 121 DIGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
DIGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR
Sbjct 121 DIGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
>gi|31794923|ref|NP_857416.1| hypothetical protein Mb3779c [Mycobacterium bovis AF2122/97]
gi|121639667|ref|YP_979891.1| hypothetical protein BCG_3812c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224992163|ref|YP_002646852.1| hypothetical protein JTY_3814 [Mycobacterium bovis BCG str. Tokyo
172]
18 more sequence titles
Length=173
Score = 318 bits (816), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/165 (100%), Positives = 165/165 (100%), Gaps = 0/165 (0%)
Query 2 QRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDE 61
QRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDE
Sbjct 9 QRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDE 68
Query 62 FFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSD 121
FFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSD
Sbjct 69 FFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSD 128
Query 122 IGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
IGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR
Sbjct 129 IGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 173
>gi|340628724|ref|YP_004747176.1| hypothetical protein MCAN_37731 [Mycobacterium canettii CIPT
140010059]
gi|340006914|emb|CCC46104.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=166
Score = 317 bits (813), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 165/165 (100%), Positives = 165/165 (100%), Gaps = 0/165 (0%)
Query 2 QRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDE 61
QRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDE
Sbjct 2 QRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDE 61
Query 62 FFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSD 121
FFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSD
Sbjct 62 FFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSD 121
Query 122 IGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
IGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR
Sbjct 122 IGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
>gi|41406376|ref|NP_959212.1| hypothetical protein MAP0278 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118464077|ref|YP_879611.1| hypothetical protein MAV_0323 [Mycobacterium avium 104]
gi|254773333|ref|ZP_05214849.1| hypothetical protein MaviaA2_01426 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41394724|gb|AAS02595.1| hypothetical protein MAP_0278 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118165364|gb|ABK66261.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336460000|gb|EGO38910.1| putative tRNA adenosine deaminase-associated protein [Mycobacterium
avium subsp. paratuberculosis S397]
Length=173
Score = 297 bits (761), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 153/165 (93%), Positives = 160/165 (97%), Gaps = 0/165 (0%)
Query 2 QRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDE 61
Q +ADTPDGFGVAVVREEG+WRC+PM PK+LTSL AAETELRELRS+GAVFGLLDVDDE
Sbjct 9 QGLSADTPDGFGVAVVREEGQWRCAPMAPKSLTSLSAAETELRELRSSGAVFGLLDVDDE 68
Query 62 FFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSD 121
FFVIVRPAPSGTRLLLSDATAALDYDIAAEVLD LDA+IDPEDLED+DPFEEGDLGLLSD
Sbjct 69 FFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDKLDADIDPEDLEDSDPFEEGDLGLLSD 128
Query 122 IGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
IGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR
Sbjct 129 IGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 173
>gi|118619511|ref|YP_907843.1| hypothetical protein MUL_4371 [Mycobacterium ulcerans Agy99]
gi|183985264|ref|YP_001853555.1| hypothetical protein MMAR_5296 [Mycobacterium marinum M]
gi|118571621|gb|ABL06372.1| conserved protein [Mycobacterium ulcerans Agy99]
gi|183178590|gb|ACC43700.1| conserved protein [Mycobacterium marinum M]
Length=173
Score = 288 bits (738), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/163 (89%), Positives = 158/163 (97%), Gaps = 0/163 (0%)
Query 4 PAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFF 63
P+A+TPDGFGVAVVREEG+WRC+ M PKAL +L AETELRELRS+GAVFGLLD+DDEFF
Sbjct 11 PSAETPDGFGVAVVREEGKWRCAAMSPKALATLSEAETELRELRSSGAVFGLLDIDDEFF 70
Query 64 VIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSDIG 123
VI+RPAPSGTRLLLSDATAALDYDIAAEVLD+LD+EIDPEDLEDADPFEEGDLGLL+DIG
Sbjct 71 VILRPAPSGTRLLLSDATAALDYDIAAEVLDSLDSEIDPEDLEDADPFEEGDLGLLADIG 130
Query 124 LPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
LPEAVLGVILDETDLYADEQLGRIAREMGFA+QLSA+IDRLGR
Sbjct 131 LPEAVLGVILDETDLYADEQLGRIAREMGFAEQLSAIIDRLGR 173
>gi|296166871|ref|ZP_06849288.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897748|gb|EFG77337.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=173
Score = 286 bits (733), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 148/165 (90%), Positives = 157/165 (96%), Gaps = 0/165 (0%)
Query 2 QRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDE 61
Q +AD PDGFGVAVVREEG+WRC+PM K+L SL+AAETELRELRSAGAVFGLLDVDDE
Sbjct 9 QGLSADIPDGFGVAVVREEGQWRCAPMARKSLMSLKAAETELRELRSAGAVFGLLDVDDE 68
Query 62 FFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSD 121
FFVIVRPAPSGTRLLLSDATAALDYDIAAEVLD LDA+IDPEDLED+DPFEEGDLGLL+D
Sbjct 69 FFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDKLDADIDPEDLEDSDPFEEGDLGLLAD 128
Query 122 IGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
IGLPEAVLGVILDE DLYADEQLGRIAREMGFADQLSAVIDR+GR
Sbjct 129 IGLPEAVLGVILDEADLYADEQLGRIAREMGFADQLSAVIDRIGR 173
>gi|240168512|ref|ZP_04747171.1| hypothetical protein MkanA1_04317 [Mycobacterium kansasii ATCC
12478]
Length=173
Score = 285 bits (730), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/163 (89%), Positives = 158/163 (97%), Gaps = 0/163 (0%)
Query 4 PAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFF 63
P+AD PDGFGVAVVREEG+WRC+ MG KALTSL AAETELRELRS+GAVFGLLD+DDEFF
Sbjct 11 PSADAPDGFGVAVVREEGKWRCAAMGRKALTSLAAAETELRELRSSGAVFGLLDIDDEFF 70
Query 64 VIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSDIG 123
+I+RPAPSGTRLLLSDATAALDYDIAAE LD+LDAEIDP+DLEDA+PFEEGDLGLL+DIG
Sbjct 71 IILRPAPSGTRLLLSDATAALDYDIAAEALDSLDAEIDPDDLEDAEPFEEGDLGLLADIG 130
Query 124 LPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
LPEAVLGVILDETDLYADEQLGRIAREMGFA+QLSA+IDRLGR
Sbjct 131 LPEAVLGVILDETDLYADEQLGRIAREMGFAEQLSALIDRLGR 173
>gi|15828338|ref|NP_302601.1| hypothetical protein ML2473 [Mycobacterium leprae TN]
gi|221230815|ref|YP_002504231.1| hypothetical protein MLBr_02473 [Mycobacterium leprae Br4923]
gi|13094031|emb|CAC31990.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933922|emb|CAR72572.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=159
Score = 277 bits (709), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 140/158 (89%), Positives = 150/158 (95%), Gaps = 0/158 (0%)
Query 9 PDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRP 68
PDGFGVAVVREEG+WRCS M K+LTSL AAETELRELRS GAVFGLLDVDDEFF+I+RP
Sbjct 2 PDGFGVAVVREEGQWRCSAMASKSLTSLTAAETELRELRSVGAVFGLLDVDDEFFIILRP 61
Query 69 APSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSDIGLPEAV 128
APSGTRLLLSDATAALDYDIAAE+LD+LDAEIDPEDLEDA PFEEGDLGLLSD+GLPEA
Sbjct 62 APSGTRLLLSDATAALDYDIAAEILDSLDAEIDPEDLEDAYPFEEGDLGLLSDVGLPEAT 121
Query 129 LGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
LGVILD+TDLYADEQLG IAREMGFA+QLSAVI+RLGR
Sbjct 122 LGVILDQTDLYADEQLGHIAREMGFAEQLSAVINRLGR 159
>gi|120406537|ref|YP_956366.1| hypothetical protein Mvan_5595 [Mycobacterium vanbaalenii PYR-1]
gi|119959355|gb|ABM16360.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=174
Score = 268 bits (686), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/166 (84%), Positives = 151/166 (91%), Gaps = 1/166 (0%)
Query 2 QRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDE 61
Q D PDGF VAVVRE+G+WRC+PM P LTSL AAETELRELRSAGAVFG+LD+DDE
Sbjct 9 QERVTDVPDGFAVAVVREDGKWRCTPMRPATLTSLTAAETELRELRSAGAVFGILDIDDE 68
Query 62 FFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSD 121
FFVIVRPAPSGTRLLLSDATAALDYDIAAEVL+ LDA+ID E+LE DPFEEGDLGLLSD
Sbjct 69 FFVIVRPAPSGTRLLLSDATAALDYDIAAEVLEKLDADIDDEELERCDPFEEGDLGLLSD 128
Query 122 IGLPEAVLGVILDET-DLYADEQLGRIAREMGFADQLSAVIDRLGR 166
IGLPEAVLGVILDE+ DLYADEQ+GRIAREMGFAD+LSAV+DRLGR
Sbjct 129 IGLPEAVLGVILDESDDLYADEQVGRIAREMGFADELSAVLDRLGR 174
>gi|108801924|ref|YP_642121.1| hypothetical protein Mmcs_4961 [Mycobacterium sp. MCS]
gi|119871076|ref|YP_941028.1| hypothetical protein Mkms_5049 [Mycobacterium sp. KMS]
gi|126437905|ref|YP_001073596.1| hypothetical protein Mjls_5342 [Mycobacterium sp. JLS]
gi|108772343|gb|ABG11065.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119697165|gb|ABL94238.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126237705|gb|ABO01106.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=169
Score = 264 bits (674), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 134/163 (83%), Positives = 149/163 (92%), Gaps = 0/163 (0%)
Query 4 PAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFF 63
PA TPDGFGVAVVRE+G+WRC+PM +L SL AE EL E+RSAGAVFGLLD+DDEFF
Sbjct 7 PAQGTPDGFGVAVVREDGKWRCAPMRRASLNSLTVAEKELCEIRSAGAVFGLLDIDDEFF 66
Query 64 VIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSDIG 123
VIVRPAPSGTRLLLSDATAALDYDIAAEVL+ LDA+I+P+DL+D DPFEEGDLGLLSD+G
Sbjct 67 VIVRPAPSGTRLLLSDATAALDYDIAAEVLEQLDADIEPDDLDDVDPFEEGDLGLLSDMG 126
Query 124 LPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
LPEAVL VILDETDLYADEQLGRIAREMGFAD+LSAV+D+L R
Sbjct 127 LPEAVLSVILDETDLYADEQLGRIAREMGFADELSAVLDKLNR 169
>gi|339296561|gb|AEJ48672.1| hypothetical protein CCDC5079_3483 [Mycobacterium tuberculosis
CCDC5079]
gi|339300160|gb|AEJ52270.1| hypothetical protein CCDC5180_3433 [Mycobacterium tuberculosis
CCDC5180]
Length=139
Score = 261 bits (668), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/139 (100%), Positives = 139/139 (100%), Gaps = 0/139 (0%)
Query 28 MGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAPSGTRLLLSDATAALDYD 87
MGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAPSGTRLLLSDATAALDYD
Sbjct 1 MGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAPSGTRLLLSDATAALDYD 60
Query 88 IAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSDIGLPEAVLGVILDETDLYADEQLGRI 147
IAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSDIGLPEAVLGVILDETDLYADEQLGRI
Sbjct 61 IAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSDIGLPEAVLGVILDETDLYADEQLGRI 120
Query 148 AREMGFADQLSAVIDRLGR 166
AREMGFADQLSAVIDRLGR
Sbjct 121 AREMGFADQLSAVIDRLGR 139
>gi|145221805|ref|YP_001132483.1| hypothetical protein Mflv_1213 [Mycobacterium gilvum PYR-GCK]
gi|315446458|ref|YP_004079337.1| hypothetical protein Mspyr1_49690 [Mycobacterium sp. Spyr1]
gi|145214291|gb|ABP43695.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315264761|gb|ADU01503.1| hypothetical protein Mspyr1_49690 [Mycobacterium sp. Spyr1]
Length=174
Score = 260 bits (665), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 134/166 (81%), Positives = 150/166 (91%), Gaps = 1/166 (0%)
Query 2 QRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDE 61
Q D PDGFGVAVVRE+G+WRC+ M ALTSL AAETELRELRSAGAVFG+LD+DDE
Sbjct 9 QERVTDVPDGFGVAVVREDGKWRCTAMQKAALTSLTAAETELRELRSAGAVFGILDIDDE 68
Query 62 FFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSD 121
FFVI+RPAPSGTRLLLSDATAALDYDIAAEVL+ LDA+ID ++LE DPFEEGDL +LSD
Sbjct 69 FFVILRPAPSGTRLLLSDATAALDYDIAAEVLEKLDADIDDDELERCDPFEEGDLAVLSD 128
Query 122 IGLPEAVLGVILDET-DLYADEQLGRIAREMGFADQLSAVIDRLGR 166
IGLPEAVLGVILDE+ DLYADEQ+GRIAREMGFAD+LSA++DRLGR
Sbjct 129 IGLPEAVLGVILDESDDLYADEQVGRIAREMGFADELSALLDRLGR 174
>gi|254822446|ref|ZP_05227447.1| hypothetical protein MintA_21106 [Mycobacterium intracellulare
ATCC 13950]
Length=139
Score = 246 bits (629), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 131/139 (95%), Positives = 135/139 (98%), Gaps = 0/139 (0%)
Query 28 MGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAPSGTRLLLSDATAALDYD 87
M K+LTSL AAETELRELRSAGAVFGLLDVDDEFFVIVRPAPSGTRLLLSDATAALDYD
Sbjct 1 MARKSLTSLAAAETELRELRSAGAVFGLLDVDDEFFVIVRPAPSGTRLLLSDATAALDYD 60
Query 88 IAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSDIGLPEAVLGVILDETDLYADEQLGRI 147
IAAEVLD LDA+IDP+DLED+DPFEEGDLGLLSDIGLPEAVLGVILDETDLYADEQLGRI
Sbjct 61 IAAEVLDKLDADIDPDDLEDSDPFEEGDLGLLSDIGLPEAVLGVILDETDLYADEQLGRI 120
Query 148 AREMGFADQLSAVIDRLGR 166
AREMGFADQLSAVIDRLGR
Sbjct 121 AREMGFADQLSAVIDRLGR 139
>gi|342859998|ref|ZP_08716650.1| hypothetical protein MCOL_14000 [Mycobacterium colombiense CECT
3035]
gi|342132376|gb|EGT85605.1| hypothetical protein MCOL_14000 [Mycobacterium colombiense CECT
3035]
Length=139
Score = 244 bits (623), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/139 (93%), Positives = 134/139 (97%), Gaps = 0/139 (0%)
Query 28 MGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAPSGTRLLLSDATAALDYD 87
M K+L SL AAETELRELRS+GAVFGLLDVDDEFFVIVRPAPSGTRLLLSDATAALDYD
Sbjct 1 MARKSLLSLAAAETELRELRSSGAVFGLLDVDDEFFVIVRPAPSGTRLLLSDATAALDYD 60
Query 88 IAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSDIGLPEAVLGVILDETDLYADEQLGRI 147
IAAEVLD LDA+IDPEDLED+DPFEEGDLGLLSD+GLPEAVLGVILDETDLYADEQLGRI
Sbjct 61 IAAEVLDKLDADIDPEDLEDSDPFEEGDLGLLSDVGLPEAVLGVILDETDLYADEQLGRI 120
Query 148 AREMGFADQLSAVIDRLGR 166
AREMGFADQLSAVIDRLGR
Sbjct 121 AREMGFADQLSAVIDRLGR 139
>gi|118468314|ref|YP_890545.1| hypothetical protein MSMEG_6328 [Mycobacterium smegmatis str.
MC2 155]
gi|118169601|gb|ABK70497.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=168
Score = 244 bits (622), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 136/165 (83%), Positives = 152/165 (93%), Gaps = 0/165 (0%)
Query 2 QRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDE 61
QR AD PDGFGVAVVRE+G+WRC+PM AL SL AAETELRE+RSAGAVFGLLDVDDE
Sbjct 4 QRAPADLPDGFGVAVVREDGKWRCAPMRKSALNSLSAAETELREIRSAGAVFGLLDVDDE 63
Query 62 FFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSD 121
FFVIVRPAP+GTRLLLSDATAALDYDIAAE L+ LDA+I+ +DL+DADPFEEGDLGLLSD
Sbjct 64 FFVIVRPAPAGTRLLLSDATAALDYDIAAEALEKLDADIEADDLDDADPFEEGDLGLLSD 123
Query 122 IGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
+GLP+AVL VILDETDLYADEQ+GRIAREMGFA++LSAV+DRL R
Sbjct 124 LGLPDAVLSVILDETDLYADEQIGRIAREMGFAEELSAVLDRLNR 168
>gi|169627372|ref|YP_001701021.1| hypothetical protein MAB_0267 [Mycobacterium abscessus ATCC 19977]
gi|169239339|emb|CAM60367.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=176
Score = 224 bits (570), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 116/166 (70%), Positives = 140/166 (85%), Gaps = 3/166 (1%)
Query 4 PAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFF 63
P+A++ +GFGVAVVREEGRWR + + +ALT L AAETELRELRSAGAVFGLLDVD+EFF
Sbjct 11 PSAESLEGFGVAVVREEGRWRVTSLKARALTDLAAAETELRELRSAGAVFGLLDVDEEFF 70
Query 64 VIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDA---EIDPEDLEDADPFEEGDLGLLS 120
+I+RPAPSGT LL+SDATAA+DYDIA EVL+ L+ E++ ++L++ DP+EEGDLGLLS
Sbjct 71 IIIRPAPSGTHLLISDATAAIDYDIAVEVLERLNIPVPELELDELDEVDPWEEGDLGLLS 130
Query 121 DIGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
DIGLPE VL VIL ETDLY DEQLG IA MGFAD+ AV+D+L R
Sbjct 131 DIGLPEPVLSVILSETDLYPDEQLGMIAARMGFADEFGAVLDKLDR 176
>gi|54022201|ref|YP_116443.1| hypothetical protein nfa2370 [Nocardia farcinica IFM 10152]
gi|54013709|dbj|BAD55079.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=179
Score = 223 bits (567), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/163 (70%), Positives = 140/163 (86%), Gaps = 3/163 (1%)
Query 7 DTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIV 66
D +GF VAVVREEG+WRCSP+ ALT L AAE EL+ LRS+GAVFGLLDVDDEFF+++
Sbjct 17 DDVEGFAVAVVREEGKWRCSPLSRAALTDLSAAEHELKALRSSGAVFGLLDVDDEFFIVL 76
Query 67 RPAPSGTRLLLSDATAALDYDIAAEVLDNLDAE---IDPEDLEDADPFEEGDLGLLSDIG 123
RPAPSGTR+L+SDATAA+DYDIAA+VLD L+ E IDP++L+D +P+EEGDLG+L+D+G
Sbjct 77 RPAPSGTRMLVSDATAAIDYDIAADVLDALNIEIPDIDPDELDDIEPWEEGDLGVLADLG 136
Query 124 LPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
LPE VL VIL ETDLY DEQLG IA+ +GFA++LSAV+D+L R
Sbjct 137 LPEPVLSVILAETDLYPDEQLGMIAQRLGFANELSAVLDKLPR 179
>gi|111021133|ref|YP_704105.1| hypothetical protein RHA1_ro04153 [Rhodococcus jostii RHA1]
gi|110820663|gb|ABG95947.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=194
Score = 207 bits (527), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/160 (67%), Positives = 130/160 (82%), Gaps = 3/160 (1%)
Query 10 DGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPA 69
+GFGVAVV E+GRW+ + ALTSL AE ELR LRSAGA FGLLDVDDEFFV++RPA
Sbjct 35 EGFGVAVVHEDGRWKVKALTSAALTSLSVAEEELRALRSAGAFFGLLDVDDEFFVVLRPA 94
Query 70 PSGTRLLLSDATAALDYDIAAEVLDNLDAE---IDPEDLEDADPFEEGDLGLLSDIGLPE 126
PSGTRLLLSDATAA+DYDIAA+VL+ L+ E IDP++L+D +P+EEGDL LL+D+GLPE
Sbjct 95 PSGTRLLLSDATAAIDYDIAADVLEALNIEVPDIDPDELDDIEPWEEGDLSLLADLGLPE 154
Query 127 AVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
VL VI ETDLY DEQLG IA+ +GF +L+ V+D+L R
Sbjct 155 PVLAVITSETDLYPDEQLGMIAQRLGFTTELAGVLDKLPR 194
>gi|343926153|ref|ZP_08765662.1| hypothetical protein GOALK_056_00210 [Gordonia alkanivorans NBRC
16433]
gi|343763782|dbj|GAA12588.1| hypothetical protein GOALK_056_00210 [Gordonia alkanivorans NBRC
16433]
Length=180
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/163 (65%), Positives = 133/163 (82%), Gaps = 3/163 (1%)
Query 7 DTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIV 66
D DGF VAVVR+E W+ S + P AL+ L AE +LRELRSAGAVFGLLDVDDEFF+++
Sbjct 18 DDIDGFAVAVVRDESGWKVSALKPSALSDLEDAERQLRELRSAGAVFGLLDVDDEFFIVI 77
Query 67 RPAPSGTRLLLSDATAALDYDIAAEVLD--NLDA-EIDPEDLEDADPFEEGDLGLLSDIG 123
RPAP+G RLLLSDATAA+DYD+AA+VLD NLD +IDP++L+ DP+EEGDL +L+D+G
Sbjct 78 RPAPTGARLLLSDATAAIDYDVAADVLDALNLDVPDIDPDELDTVDPWEEGDLAVLADLG 137
Query 124 LPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
LP+AV+ +I+ +TDLYADEQLG IA +GFAD+L V+D LG
Sbjct 138 LPDAVMSIIVGDTDLYADEQLGMIAARLGFADELGKVLDSLGH 180
>gi|326385120|ref|ZP_08206789.1| hypothetical protein SCNU_19340 [Gordonia neofelifaecis NRRL
B-59395]
gi|326196153|gb|EGD53358.1| hypothetical protein SCNU_19340 [Gordonia neofelifaecis NRRL
B-59395]
Length=176
Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/173 (61%), Positives = 136/173 (79%), Gaps = 7/173 (4%)
Query 1 MQRPAA----DTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLL 56
M +P A D +GF VAV+REE W+ + + P AL SL AE +LRELR+ GAVFGLL
Sbjct 4 MAKPGAQSEYDEVEGFAVAVIREETGWKLTTLKPSALDSLDDAELQLRELRATGAVFGLL 63
Query 57 DVDDEFFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDA---EIDPEDLEDADPFEE 113
DVDDEFF+IVRPAP+G +LLSDATAA+DYDIAA+ LD L +IDP++L+D DP+EE
Sbjct 64 DVDDEFFLIVRPAPTGAHVLLSDATAAVDYDIAADALDALHIDIPDIDPDELDDVDPWEE 123
Query 114 GDLGLLSDIGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
GDL +L+D+GLP+AVL +I+ +TDLYADEQ+G IA +GFAD+L+A +D+LGR
Sbjct 124 GDLSILTDLGLPDAVLSIIVGDTDLYADEQIGMIAARLGFADELAAELDKLGR 176
>gi|312137791|ref|YP_004005127.1| hypothetical protein REQ_02970 [Rhodococcus equi 103S]
gi|325676108|ref|ZP_08155790.1| hypothetical protein HMPREF0724_13573 [Rhodococcus equi ATCC
33707]
gi|311887130|emb|CBH46439.1| conserved hypothetical protein [Rhodococcus equi 103S]
gi|325553148|gb|EGD22828.1| hypothetical protein HMPREF0724_13573 [Rhodococcus equi ATCC
33707]
Length=179
Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/160 (72%), Positives = 138/160 (87%), Gaps = 3/160 (1%)
Query 10 DGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPA 69
DGFG+AVVREEGRW+C+P+ ALTSLR AE EL ELRS+GAVFGLLDVD+EFFVIVRPA
Sbjct 20 DGFGIAVVREEGRWKCTPLTGDALTSLRVAEKELLELRSSGAVFGLLDVDEEFFVIVRPA 79
Query 70 PSGTRLLLSDATAALDYDIAAEVLDNLDAE---IDPEDLEDADPFEEGDLGLLSDIGLPE 126
P+GTRLL+SDATAA+DYD+AA+VLD L+ E IDP++L+D +P+EEGDLGLLSD+GLP+
Sbjct 80 PAGTRLLISDATAAIDYDVAADVLDALNVEIPDIDPDELDDVEPWEEGDLGLLSDLGLPD 139
Query 127 AVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
AVLGVIL ETDLY DEQL IA+ GF +LSA +D+L R
Sbjct 140 AVLGVILAETDLYPDEQLTMIAQRCGFESELSAALDKLPR 179
>gi|226303818|ref|YP_002763776.1| hypothetical protein RER_03290 [Rhodococcus erythropolis PR4]
gi|229492488|ref|ZP_04386291.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|226182933|dbj|BAH31037.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
gi|229320474|gb|EEN86292.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=179
Score = 200 bits (508), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 110/160 (69%), Positives = 133/160 (84%), Gaps = 3/160 (1%)
Query 10 DGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPA 69
+GFGVAVVREEGRW + P ALTSL AAET+LRELRS+GAVFGLLDVDDEFF+++RPA
Sbjct 20 EGFGVAVVREEGRWTVKALTPDALTSLSAAETQLRELRSSGAVFGLLDVDDEFFIVLRPA 79
Query 70 PSGTRLLLSDATAALDYDIAAEVLDNLDAE---IDPEDLEDADPFEEGDLGLLSDIGLPE 126
PSGT+LL+SDATAA+DYDIAA+VLD L E IDP+DL+D +P+EEGDL +L+D+GLPE
Sbjct 80 PSGTQLLISDATAAIDYDIAADVLDALHIEIPDIDPDDLDDVEPWEEGDLSVLADLGLPE 139
Query 127 AVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
VL VI ETDLY DEQLG IA+ +GFA + A +D+L R
Sbjct 140 PVLAVIAAETDLYPDEQLGMIAQRLGFASEFGAALDKLPR 179
>gi|333992674|ref|YP_004525288.1| hypothetical protein JDM601_4034 [Mycobacterium sp. JDM601]
gi|333488642|gb|AEF38034.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=150
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/150 (78%), Positives = 131/150 (88%), Gaps = 0/150 (0%)
Query 17 VREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAPSGTRLL 76
+RE+G+WRC+ M ALTSL AETELRELRSAGAVFGLL+VDDEFFVI+RP P+GTRLL
Sbjct 1 MREDGKWRCTSMRAVALTSLTKAETELRELRSAGAVFGLLNVDDEFFVIIRPGPAGTRLL 60
Query 77 LSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSDIGLPEAVLGVILDET 136
LSDATAALDYDIA EVL+ LDA+ID +DLEDADPFEEGDLGLLSDIGLP AVLGVILDE+
Sbjct 61 LSDATAALDYDIADEVLEELDADIDADDLEDADPFEEGDLGLLSDIGLPAAVLGVILDES 120
Query 137 DLYADEQLGRIAREMGFADQLSAVIDRLGR 166
DL DEQL RIA EMGF +QL+A + R GR
Sbjct 121 DLAVDEQLHRIASEMGFDEQLTAALPRRGR 150
>gi|226363495|ref|YP_002781277.1| hypothetical protein ROP_40850 [Rhodococcus opacus B4]
gi|226241984|dbj|BAH52332.1| hypothetical protein [Rhodococcus opacus B4]
Length=179
Score = 193 bits (491), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 105/160 (66%), Positives = 129/160 (81%), Gaps = 3/160 (1%)
Query 10 DGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPA 69
+GFGVAVV E+GRW+ + ALTSL AE ELR LRSAGA FGLLDVDDEFF+++RPA
Sbjct 20 EGFGVAVVHEDGRWKVKALTSAALTSLSVAEEELRALRSAGAFFGLLDVDDEFFIVLRPA 79
Query 70 PSGTRLLLSDATAALDYDIAAEVLDNLDAEI---DPEDLEDADPFEEGDLGLLSDIGLPE 126
PSGTRLLLSDATAA+DYDIAA+VL+ L+ E+ DP+DL+D +P+EEGDL LL+D+GLPE
Sbjct 80 PSGTRLLLSDATAAIDYDIAADVLEALNVEVPDIDPDDLDDVEPWEEGDLSLLADLGLPE 139
Query 127 AVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
VL VI ETDLY DEQL IA+ +GF +L+ V+D+L R
Sbjct 140 PVLAVITSETDLYPDEQLAMIAQRLGFTTELTGVLDKLPR 179
>gi|262200336|ref|YP_003271544.1| hypothetical protein Gbro_0309 [Gordonia bronchialis DSM 43247]
gi|262083683|gb|ACY19651.1| hypothetical protein Gbro_0309 [Gordonia bronchialis DSM 43247]
Length=179
Score = 191 bits (484), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/163 (64%), Positives = 134/163 (83%), Gaps = 3/163 (1%)
Query 7 DTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIV 66
D DGF VAVVRE+G W+ + M P AL+ L AE +LR+LRSAGAVFGLLDVDDEFF+++
Sbjct 17 DDIDGFAVAVVREDGAWKVTAMKPGALSDLSDAERQLRDLRSAGAVFGLLDVDDEFFIVI 76
Query 67 RPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEI---DPEDLEDADPFEEGDLGLLSDIG 123
RPAPSG LLLSDATAA+DYDIAA+ LD L+ ++ DP++L+D DP+EEGDL +L+D+G
Sbjct 77 RPAPSGAHLLLSDATAAVDYDIAADALDALNIDVPDLDPDELDDIDPWEEGDLAVLADLG 136
Query 124 LPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
LP+AV+ +I+++TDLYADEQ+G IA +GFAD+LS V+D LG
Sbjct 137 LPDAVMSIIVNDTDLYADEQIGMIAARLGFADELSKVLDSLGH 179
>gi|333917872|ref|YP_004491453.1| hypothetical protein AS9A_0192 [Amycolicicoccus subflavus DQS3-9A1]
gi|333480092|gb|AEF38652.1| hypothetical protein AS9A_0192 [Amycolicicoccus subflavus DQS3-9A1]
Length=176
Score = 186 bits (472), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 105/160 (66%), Positives = 131/160 (82%), Gaps = 3/160 (1%)
Query 10 DGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPA 69
DGFG+ VVREEGRWRC PM ALTSL AETELRELRS+GA FGLLDVDDEFFVIVRP+
Sbjct 17 DGFGIGVVREEGRWRCVPMPLAALTSLSEAETELRELRSSGATFGLLDVDDEFFVIVRPS 76
Query 70 PSGTRLLLSDATAALDYDIAAEVLDNLDAEI---DPEDLEDADPFEEGDLGLLSDIGLPE 126
P+GT LL+SDA AA+DYDIAA+VL+ L+ E+ DP++L++ DP+EEG+LG+L+D+GLPE
Sbjct 77 PAGTHLLISDAAAAIDYDIAADVLEMLNVEVPDLDPDELDETDPWEEGELGILADLGLPE 136
Query 127 AVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRLGR 166
V+ VIL ETDLY DEQL IA +GF + +AV+D + +
Sbjct 137 PVMSVILAETDLYPDEQLQMIAERLGFEREFAAVVDSIQK 176
>gi|296392970|ref|YP_003657854.1| hypothetical protein Srot_0539 [Segniliparus rotundus DSM 44985]
gi|296180117|gb|ADG97023.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985]
Length=169
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/160 (63%), Positives = 120/160 (75%), Gaps = 3/160 (1%)
Query 1 MQRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDD 60
M A P G VAVVREEGRWR + PK LTSL AE ELRELRS AVFGL++VDD
Sbjct 1 MSSQHAKGPVGLAVAVVREEGRWRVLGLSPKVLTSLEQAERELRELRSTSAVFGLINVDD 60
Query 61 EFFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEI--DPEDLEDADPFEEGDLGL 118
EFFVIVRP P +RLLLSDATAALDYD+AA+VLD L EI E +D +P+ EGD G+
Sbjct 61 EFFVIVRPGPGSSRLLLSDATAALDYDLAADVLDELHVEIPDPDELDDDEEPWAEGDFGI 120
Query 119 LSDIGLPEAVLGVILDETD-LYADEQLGRIAREMGFADQL 157
L D+GLPE+VLG+I+ E+D LYADEQL +AR++GF ++L
Sbjct 121 LEDLGLPESVLGLIVSESDELYADEQLAALARQLGFEEEL 160
>gi|257057633|ref|YP_003135465.1| hypothetical protein Svir_36890 [Saccharomonospora viridis DSM
43017]
gi|256587505|gb|ACU98638.1| hypothetical protein Svir_36890 [Saccharomonospora viridis DSM
43017]
Length=160
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/155 (64%), Positives = 115/155 (75%), Gaps = 2/155 (1%)
Query 10 DGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPA 69
+GF VAVVRE+GRWRC + L+ L A TELR+LRS GAVFGLL VDDEFFVIVRPA
Sbjct 8 EGFAVAVVREDGRWRCERLDDAVLSELDTAITELRKLRSPGAVFGLLAVDDEFFVIVRPA 67
Query 70 PSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSDIGLPEAVL 129
PSG L LSDA+AALDYDIAA+VLD L AE P+D +D + GDL +LSD+G+P L
Sbjct 68 PSGVALFLSDASAALDYDIAADVLDLLRAEA-PDDDDDV-IWPVGDLEILSDLGMPAPEL 125
Query 130 GVILDETDLYADEQLGRIAREMGFADQLSAVIDRL 164
VI +E +LY DEQL IA+ GFADQ SAV+D L
Sbjct 126 EVIANEIELYPDEQLQMIAQRCGFADQYSAVLDEL 160
>gi|317507918|ref|ZP_07965614.1| hypothetical protein HMPREF9336_01986 [Segniliparus rugosus ATCC
BAA-974]
gi|316253783|gb|EFV13157.1| hypothetical protein HMPREF9336_01986 [Segniliparus rugosus ATCC
BAA-974]
Length=176
Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/161 (59%), Positives = 117/161 (73%), Gaps = 3/161 (1%)
Query 1 MQRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDD 60
M A G GVAV+REEG WR + PK L SL AE ELRELRS AVFGL++VDD
Sbjct 1 MSSQEAHGLVGVGVAVLREEGHWRVLELSPKVLASLEQAERELRELRSTSAVFGLINVDD 60
Query 61 EFFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEI--DPEDLEDADPFEEGDLGL 118
EFFVIVRP P G+RLLLSDATAALDYD+AA+VLD L EI E +D +P+ EGD +
Sbjct 61 EFFVIVRPGPGGSRLLLSDATAALDYDLAADVLDELHVEIPDPDELDDDEEPWAEGDFAI 120
Query 119 LSDIGLPEAVLGVILDETD-LYADEQLGRIAREMGFADQLS 158
L D+GL E+VL +I+ E+D LYADEQ+ +AR++GF ++L+
Sbjct 121 LEDLGLSESVLSLIVSESDELYADEQITALARQLGFEEELA 161
>gi|258650783|ref|YP_003199939.1| hypothetical protein Namu_0533 [Nakamurella multipartita DSM
44233]
gi|258554008|gb|ACV76950.1| hypothetical protein Namu_0533 [Nakamurella multipartita DSM
44233]
Length=164
Score = 166 bits (421), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 88/164 (54%), Positives = 113/164 (69%), Gaps = 0/164 (0%)
Query 1 MQRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDD 60
M +T +GFGVAV RE+ WRCS + P+ L L T LR + S+G VF +L VDD
Sbjct 1 MSTAGTNTTEGFGVAVTREDSTWRCSLLAPELLDDLDGVITGLRRVASSGPVFAMLAVDD 60
Query 61 EFFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLS 120
EFFVIVRP P G LLLSDATA LDYDIAA+VLD L +I +D D +P+ EGDLGLL+
Sbjct 61 EFFVIVRPIPGGAALLLSDATAGLDYDIAADVLDLLQVQIPEDDEVDDEPWPEGDLGLLA 120
Query 121 DIGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRL 164
D+G+ E + +I+D+ DLY DEQL IA GFAD SA+++++
Sbjct 121 DLGVAEQEMQLIVDDVDLYPDEQLSMIAARCGFADAFSAILEKV 164
>gi|319948569|ref|ZP_08022698.1| hypothetical protein ES5_04306 [Dietzia cinnamea P4]
gi|319437768|gb|EFV92759.1| hypothetical protein ES5_04306 [Dietzia cinnamea P4]
Length=305
Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/154 (54%), Positives = 110/154 (72%), Gaps = 3/154 (1%)
Query 7 DTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIV 66
D+ GF + VV++ G W+ + + ALTSL A ++R LR+ G FGL+DVD EFFVI+
Sbjct 145 DSVTGFALGVVQDGGSWQVNRLDDSALTSLDDAARQVRALRAEGPSFGLVDVDHEFFVIL 204
Query 67 RPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEI---DPEDLEDADPFEEGDLGLLSDIG 123
RP PSG RL+LSDATA+LDYD+AA+VLD L+ ++ E+LED DP+ EGD+ +L D+G
Sbjct 205 RPGPSGMRLMLSDATASLDYDLAADVLDELNVDVPDMTDEELEDTDPWGEGDMAILEDMG 264
Query 124 LPEAVLGVILDETDLYADEQLGRIAREMGFADQL 157
LP VL +I+ E DLYADEQL +A MGF D+
Sbjct 265 LPAGVLEIIVSEVDLYADEQLQSVAERMGFGDEF 298
>gi|296141716|ref|YP_003648959.1| hypothetical protein Tpau_4049 [Tsukamurella paurometabola DSM
20162]
gi|296029850|gb|ADG80620.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=172
Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/161 (53%), Positives = 113/161 (71%), Gaps = 3/161 (1%)
Query 7 DTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIV 66
D DG+ VAVVR+E W S + P L ++ AE ELR LR+AGA FGLL+VDDE+FVIV
Sbjct 11 DDIDGYAVAVVRDETSWTVSLLDPAVLRNVARAEEELRSLRAAGAAFGLLNVDDEYFVIV 70
Query 67 RPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEI---DPEDLEDADPFEEGDLGLLSDIG 123
RP PSGTRLLLSDATAA+ D+A + L L+ ++ DP++++D DP+ EGDL +L D+G
Sbjct 71 RPGPSGTRLLLSDATAAIFDDLAEQTLGRLNVDVPDLDPDEVDDTDPWPEGDLNILGDLG 130
Query 124 LPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRL 164
L E V+L + DLYADEQ+ IA + F +L+ ++D L
Sbjct 131 LGEQEFSVLLADPDLYADEQVQVIAERLQFEAELAKILDAL 171
>gi|331694221|ref|YP_004330460.1| hypothetical protein Psed_0334 [Pseudonocardia dioxanivorans
CB1190]
gi|326948910|gb|AEA22607.1| hypothetical protein Psed_0334 [Pseudonocardia dioxanivorans
CB1190]
Length=170
Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/143 (61%), Positives = 103/143 (73%), Gaps = 2/143 (1%)
Query 11 GFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAP 70
G+ VA +REEGRWRC + AL L AA TELR LRS GAV GLLDVDDEFFV++RP P
Sbjct 19 GYAVAAIREEGRWRCISLDVAALHDLDAAITELRALRSTGAVVGLLDVDDEFFVLLRPVP 78
Query 71 SGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSDIGLPEAVLG 130
G LL+SDA AALDYD+AA+VLD L E+ P D EDA + EGDL +L+D+GLP L
Sbjct 79 GGVSLLVSDAVAALDYDVAADVLDLLRVEL-PSDGEDA-LWPEGDLAILADLGLPAEELE 136
Query 131 VILDETDLYADEQLGRIAREMGF 153
V+++E +LY DEQL I R GF
Sbjct 137 VLVNELELYPDEQLAAIGRRCGF 159
>gi|324998976|ref|ZP_08120088.1| hypothetical protein PseP1_09438 [Pseudonocardia sp. P1]
Length=171
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/152 (57%), Positives = 109/152 (72%), Gaps = 0/152 (0%)
Query 11 GFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAP 70
GF VA +REEGRWRC + L L AA T LR RS GAV GLLDVDDEFFV++RP+P
Sbjct 19 GFAVAAIREEGRWRCVRLDQATLVDLDAAITALRAQRSTGAVLGLLDVDDEFFVLLRPSP 78
Query 71 SGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSDIGLPEAVLG 130
G RLL+SDA AALDYD+AA+VLD L E+ P+D DP+ EGDLG+++D+GLP L
Sbjct 79 GGVRLLISDAVAALDYDVAADVLDLLRVELPPDDDALDDPWPEGDLGIVADLGLPADELE 138
Query 131 VILDETDLYADEQLGRIAREMGFADQLSAVID 162
+++ + +LY DEQL IAR GFA QL +++
Sbjct 139 ILVGDLELYPDEQLDTIARRCGFATQLDELVN 170
>gi|256374327|ref|YP_003097987.1| hypothetical protein Amir_0170 [Actinosynnema mirum DSM 43827]
gi|255918630|gb|ACU34141.1| hypothetical protein Amir_0170 [Actinosynnema mirum DSM 43827]
Length=176
Score = 150 bits (380), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/165 (57%), Positives = 119/165 (73%), Gaps = 3/165 (1%)
Query 1 MQRPAADTP-DGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVD 59
+ P + P GF VAVVRE+ RWRCS + AL+ L AA T+LR LRS GAVFGLL VD
Sbjct 12 VHMPEQEPPVHGFAVAVVREDNRWRCSTLDGDALSELDAAITQLRGLRSTGAVFGLLAVD 71
Query 60 DEFFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLL 119
DEFF+++RP P G LLLSDA AALDYDIAA+VLD L +DP D ED + + EGDL +L
Sbjct 72 DEFFIVLRPVPGGVSLLLSDAAAALDYDIAADVLDLL--RVDPPDEEDEELWPEGDLAVL 129
Query 120 SDIGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRL 164
+D+G+P+ L VI+DE DLY DEQL IA+ +GF ++ + ++D L
Sbjct 130 ADLGMPKHELQVIVDEVDLYPDEQLQMIAQRIGFGEEFTRLLDTL 174
>gi|340532455|gb|AEK47660.1| hypothetical protein RAM_45975 [Amycolatopsis mediterranei S699]
Length=160
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/154 (62%), Positives = 112/154 (73%), Gaps = 2/154 (1%)
Query 11 GFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAP 70
GF VAVVRE+GRWRCS + P ALT L AA TEL +LRS GA FGLL VDDEFFVIVRP+P
Sbjct 9 GFAVAVVREDGRWRCSALDPGALTELDAAITELGKLRSTGASFGLLAVDDEFFVIVRPSP 68
Query 71 SGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSDIGLPEAVLG 130
G LLLSDA AALDYDIAA+VLD L +DP D ED + EGDL +L+D+GLP L
Sbjct 69 RGPALLLSDAAAALDYDIAADVLDVL--RVDPPDEEDDSVWPEGDLEILADLGLPGPELE 126
Query 131 VILDETDLYADEQLGRIAREMGFADQLSAVIDRL 164
VI+ E DLY DEQL +A+ GF + + ++D L
Sbjct 127 VIVGEVDLYPDEQLQMVAQRCGFGSEFAKLLDEL 160
>gi|300790763|ref|YP_003771054.1| hypothetical protein AMED_8962 [Amycolatopsis mediterranei U32]
gi|299800277|gb|ADJ50652.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length=180
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/154 (62%), Positives = 112/154 (73%), Gaps = 2/154 (1%)
Query 11 GFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAP 70
GF VAVVRE+GRWRCS + P ALT L AA TEL +LRS GA FGLL VDDEFFVIVRP+P
Sbjct 29 GFAVAVVREDGRWRCSALDPGALTELDAAITELGKLRSTGASFGLLAVDDEFFVIVRPSP 88
Query 71 SGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSDIGLPEAVLG 130
G LLLSDA AALDYDIAA+VLD L +DP D ED + EGDL +L+D+GLP L
Sbjct 89 RGPALLLSDAAAALDYDIAADVLDVL--RVDPPDEEDDSVWPEGDLEILADLGLPGPELE 146
Query 131 VILDETDLYADEQLGRIAREMGFADQLSAVIDRL 164
VI+ E DLY DEQL +A+ GF + + ++D L
Sbjct 147 VIVGEVDLYPDEQLQMVAQRCGFGSEFAKLLDEL 180
>gi|302530975|ref|ZP_07283317.1| predicted protein [Streptomyces sp. AA4]
gi|302439870|gb|EFL11686.1| predicted protein [Streptomyces sp. AA4]
Length=173
Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/154 (62%), Positives = 112/154 (73%), Gaps = 2/154 (1%)
Query 11 GFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAP 70
GF +AVVRE+GRWRCS + ALT L AA TEL +LRS GA FGLL VDDEFFVIVRP+P
Sbjct 22 GFAIAVVREDGRWRCSALDSSALTELDAAITELGKLRSTGAAFGLLAVDDEFFVIVRPSP 81
Query 71 SGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSDIGLPEAVLG 130
G LLLSDA AALDYDIAA+VLD L +DP D +D + EGDL +L+D+GLP L
Sbjct 82 RGPSLLLSDAAAALDYDIAADVLDVL--RVDPPDEDDDAVWPEGDLEILADLGLPGGELE 139
Query 131 VILDETDLYADEQLGRIAREMGFADQLSAVIDRL 164
VI+ E DLY DEQL IA+ GF + S ++D+L
Sbjct 140 VIVGEVDLYPDEQLQMIAQRCGFEAEFSKLLDQL 173
>gi|134096849|ref|YP_001102510.1| hypothetical protein SACE_0232 [Saccharopolyspora erythraea NRRL
2338]
gi|133909472|emb|CAL99584.1| hypothetical protein SACE_0232 [Saccharopolyspora erythraea NRRL
2338]
Length=352
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/154 (61%), Positives = 113/154 (74%), Gaps = 2/154 (1%)
Query 11 GFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAP 70
GF VAVVRE+GRWRCS M L L A TELR LRS GAVFG+ +VDDEFFV++RP P
Sbjct 199 GFAVAVVREDGRWRCSAMDSSVLAGLDTAITELRGLRSTGAVFGMCNVDDEFFVLIRPVP 258
Query 71 SGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSDIGLPEAVLG 130
G LLLSDA AALDYDIAA+VLD L IDP D +D + + EG+L +LSDIGLPE L
Sbjct 259 GGVDLLLSDAAAALDYDIAADVLDLL--RIDPPDEDDDEVWPEGNLAILSDIGLPEGELL 316
Query 131 VILDETDLYADEQLGRIAREMGFADQLSAVIDRL 164
VI++E DLY DEQL IA+ GF +Q + ++++L
Sbjct 317 VIIEEVDLYPDEQLEMIAQRCGFGEQFAGLMEKL 350
>gi|291005106|ref|ZP_06563079.1| hypothetical protein SeryN2_11342 [Saccharopolyspora erythraea
NRRL 2338]
Length=175
Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/163 (59%), Positives = 116/163 (72%), Gaps = 6/163 (3%)
Query 2 QRPAADTPDGFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDE 61
Q P A GF VAVVRE+GRWRCS M L L A TELR LRS GAVFG+ +VDDE
Sbjct 17 QEPVA----GFAVAVVREDGRWRCSAMDSSVLAGLDTAITELRGLRSTGAVFGMCNVDDE 72
Query 62 FFVIVRPAPSGTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDADPFEEGDLGLLSD 121
FFV++RP P G LLLSDA AALDYDIAA+VLD L IDP D +D + + EG+L +LSD
Sbjct 73 FFVLIRPVPGGVDLLLSDAAAALDYDIAADVLDLL--RIDPPDEDDDEVWPEGNLAILSD 130
Query 122 IGLPEAVLGVILDETDLYADEQLGRIAREMGFADQLSAVIDRL 164
IGLPE L VI++E DLY DEQL IA+ GF +Q + ++++L
Sbjct 131 IGLPEGELLVIIEEVDLYPDEQLEMIAQRCGFGEQFAGLMEKL 173
>gi|68537119|ref|YP_251824.1| hypothetical protein jk2024 [Corynebacterium jeikeium K411]
gi|68264718|emb|CAI38206.1| hypothetical protein jk2024 [Corynebacterium jeikeium K411]
Length=175
Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/152 (49%), Positives = 102/152 (68%), Gaps = 2/152 (1%)
Query 12 FGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAPS 71
F V+ +R +G+W + +A SL A ELR R+ G V GLL V+D++ V++RP PS
Sbjct 18 FAVSAIRADGQWHLRELPTRATESLPALIAELRASRAEGPVVGLLCVEDDWSVVLRPVPS 77
Query 72 GTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDA--DPFEEGDLGLLSDIGLPEAVL 129
G R+LLSDATAALDYDIA+EVLD LD + E+ D DP+ EGD LL D+G E ++
Sbjct 78 GVRILLSDATAALDYDIASEVLDTLDIDAPSEEEADTSDDPWPEGDFDLLEDLGASEQIM 137
Query 130 GVILDETDLYADEQLGRIAREMGFADQLSAVI 161
+I + DLY EQ+ R+A E+GFAD+L+ ++
Sbjct 138 SIIFYDDDLYGAEQVLRVADELGFADELADLV 169
>gi|260579467|ref|ZP_05847347.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
43734]
gi|258602410|gb|EEW15707.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
43734]
Length=182
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/152 (49%), Positives = 102/152 (68%), Gaps = 2/152 (1%)
Query 12 FGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAPS 71
F V+ +R +G+W + +A SL ELR R+ G V GLL V+D++ V++RP PS
Sbjct 25 FAVSAIRADGQWHLRELPTRATESLPDLIAELRASRAEGPVVGLLCVEDDWSVVLRPVPS 84
Query 72 GTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDA--DPFEEGDLGLLSDIGLPEAVL 129
G R+LLSDATAALDYDIA+EVLD LD + E+ DA DP+ EGD LL D+G E ++
Sbjct 85 GVRILLSDATAALDYDIASEVLDTLDIDAPSEEEADASDDPWPEGDFDLLEDLGASEQIM 144
Query 130 GVILDETDLYADEQLGRIAREMGFADQLSAVI 161
+I + DLY EQ+ R+A E+GFAD+L+ ++
Sbjct 145 SIIFYDDDLYGAEQVLRVADELGFADELADLV 176
>gi|145294346|ref|YP_001137167.1| hypothetical protein cgR_0301 [Corynebacterium glutamicum R]
gi|21322991|dbj|BAB97620.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
gi|140844266|dbj|BAF53265.1| hypothetical protein [Corynebacterium glutamicum R]
Length=174
Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/154 (48%), Positives = 95/154 (62%), Gaps = 4/154 (2%)
Query 11 GFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAP 70
F V EG+W+ + L + +R LRS G F LL VDDE+FV+VRP P
Sbjct 19 SFAVTATLVEGKWQVREFE-DHFSKLSTSINAVRSLRSEGPAFALLCVDDEYFVMVRPTP 77
Query 71 SGTRLLLSDATAALDYDIAAEVLDNLDA---EIDPEDLEDADPFEEGDLGLLSDIGLPEA 127
S L LSDA A+D D AA V+D LDA +I+P+DL+D DP+ EGD +L+D+GL E
Sbjct 78 SRVFLFLSDAPMAVDDDFAAAVMDELDADLPDINPDDLDDIDPWPEGDFDILADLGLSEE 137
Query 128 VLGVILDETDLYADEQLGRIAREMGFADQLSAVI 161
VL VI D+ DL EQL RIA E+GF + L+ V+
Sbjct 138 VLSVICDDMDLDPSEQLLRIAEELGFDNDLARVV 171
>gi|38232869|ref|NP_938636.1| hypothetical protein DIP0246 [Corynebacterium diphtheriae NCTC
13129]
gi|38199127|emb|CAE48751.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length=150
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/148 (46%), Positives = 95/148 (65%), Gaps = 6/148 (4%)
Query 11 GFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAP 70
F V V R W+ +SL+ + +R L + GA F +L ++D++FV+VRP P
Sbjct 4 NFAVTVARVNATWQVRAFNDD-YSSLKRSIDAVRTLGAEGAAFAMLSIEDDYFVLVRPTP 62
Query 71 SGTRLLLSDATAALDYDIAAEVLDNLDA-EIDPEDLEDADPFEEGDLGLLSDIGLPEAVL 129
G +LL+SDATAA + D AA++LD LDA + DPED P+ EGD +L+D+GL E ++
Sbjct 63 QGVKLLISDATAATEDDFAADILDELDADQPDPEDT----PYAEGDFDILADLGLSEQIM 118
Query 130 GVILDETDLYADEQLGRIAREMGFADQL 157
+I DETD +A EQL RIA E+GF D+L
Sbjct 119 SIITDETDWWASEQLQRIAEELGFDDEL 146
>gi|19551478|ref|NP_599480.1| hypothetical protein NCgl0224 [Corynebacterium glutamicum ATCC
13032]
gi|62389125|ref|YP_224527.1| hypothetical protein cg0280 [Corynebacterium glutamicum ATCC
13032]
gi|41324458|emb|CAF18798.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC
13032]
Length=164
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/154 (48%), Positives = 95/154 (62%), Gaps = 4/154 (2%)
Query 11 GFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAP 70
F V EG+W+ + L + +R LRS G F LL VDDE+FV+VRP P
Sbjct 9 SFAVTATLVEGKWQVREFE-DHFSKLSTSINAVRSLRSEGPAFALLCVDDEYFVMVRPTP 67
Query 71 SGTRLLLSDATAALDYDIAAEVLDNLDA---EIDPEDLEDADPFEEGDLGLLSDIGLPEA 127
S L LSDA A+D D AA V+D LDA +I+P+DL+D DP+ EGD +L+D+GL E
Sbjct 68 SRVFLFLSDAPMAVDDDFAAAVMDELDADLPDINPDDLDDIDPWPEGDFDILADLGLSEE 127
Query 128 VLGVILDETDLYADEQLGRIAREMGFADQLSAVI 161
VL VI D+ DL EQL RIA E+GF + L+ V+
Sbjct 128 VLSVICDDMDLDPSEQLLRIAEELGFDNDLARVV 161
>gi|344045138|gb|EGV40811.1| hypothetical protein CgS9114_05612 [Corynebacterium glutamicum
S9114]
Length=164
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/154 (48%), Positives = 95/154 (62%), Gaps = 4/154 (2%)
Query 11 GFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAP 70
F V EG+W+ + L + +R LRS G F LL VDDE+FV+VRP P
Sbjct 9 SFAVTATLVEGKWQVREFE-DHFSKLSTSINAVRSLRSEGPAFALLCVDDEYFVMVRPTP 67
Query 71 SGTRLLLSDATAALDYDIAAEVLDNLDA---EIDPEDLEDADPFEEGDLGLLSDIGLPEA 127
S L LSDA A+D D AA V+D LDA +I+P+DL+D DP+ EGD +L+D+GL E
Sbjct 68 SRVFLFLSDAPMAVDDDFAAAVMDELDADLPDINPDDLDDIDPWPEGDFDILADLGLSEE 127
Query 128 VLGVILDETDLYADEQLGRIAREMGFADQLSAVI 161
VL VI D+ DL EQL RIA E+GF + L+ V+
Sbjct 128 VLSVICDDMDLDPSEQLLRIAEELGFDNDLARVV 161
>gi|225020160|ref|ZP_03709352.1| hypothetical protein CORMATOL_00160 [Corynebacterium matruchotii
ATCC 33806]
gi|224947125|gb|EEG28334.1| hypothetical protein CORMATOL_00160 [Corynebacterium matruchotii
ATCC 33806]
Length=157
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/154 (46%), Positives = 90/154 (59%), Gaps = 4/154 (2%)
Query 11 GFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAP 70
F V V R W S +++ A +R LR+ A F LL VDDE+FVIVRP P
Sbjct 4 NFAVTVARLGSSWDVSTFHDD-FSTVDTAVGAVRSLRAESAAFALLCVDDEYFVIVRPTP 62
Query 71 SGTRLLLSDATAALDYDIAAEVLDNLDAE---IDPEDLEDADPFEEGDLGLLSDIGLPEA 127
SG RL LSDA+ D AA +L+ LD E I ED D + + EGD +L D+GL E
Sbjct 63 SGVRLFLSDASMGAVDDFAASILEELDVEVPDIAEEDFADTEGWPEGDFDILVDVGLSEQ 122
Query 128 VLGVILDETDLYADEQLGRIAREMGFADQLSAVI 161
VL VI+DE++ +A EQL RIA E+GF D L+ +
Sbjct 123 VLSVIVDESEWWASEQLQRIAEELGFDDALAKAV 156
>gi|305679933|ref|ZP_07402743.1| putative tRNA adenosine deaminase-associated protein [Corynebacterium
matruchotii ATCC 14266]
gi|305660553|gb|EFM50050.1| putative tRNA adenosine deaminase-associated protein [Corynebacterium
matruchotii ATCC 14266]
Length=157
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/154 (46%), Positives = 90/154 (59%), Gaps = 4/154 (2%)
Query 11 GFGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAP 70
F V V R W S +++ A +R LR+ A F LL VDDE+FVIVRP P
Sbjct 4 NFAVTVARLGSSWDVSTFHDD-FSTVDTAVGAVRSLRAESAAFALLCVDDEYFVIVRPTP 62
Query 71 SGTRLLLSDATAALDYDIAAEVLDNLDAE---IDPEDLEDADPFEEGDLGLLSDIGLPEA 127
SG RL LSDA+ D AA +L+ LD E I ED D + + EGD +L D+GL E
Sbjct 63 SGVRLFLSDASMGAVDDFAASILEELDVEVPDIAEEDFADTEGWPEGDFDILVDVGLSEQ 122
Query 128 VLGVILDETDLYADEQLGRIAREMGFADQLSAVI 161
VL VI+DE++ +A EQL RIA E+GF D L+ +
Sbjct 123 VLSVIVDESEWWASEQLQRIAEELGFDDALAKAV 156
>gi|336326644|ref|YP_004606610.1| hypothetical protein CRES_2093 [Corynebacterium resistens DSM
45100]
gi|336102626|gb|AEI10446.1| hypothetical protein CRES_2093 [Corynebacterium resistens DSM
45100]
Length=165
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/152 (43%), Positives = 96/152 (64%), Gaps = 2/152 (1%)
Query 12 FGVAVVREEGRWRCSPMGPKALTSLRAAETELRELRSAGAVFGLLDVDDEFFVIVRPAPS 71
F V +G W + K+L SL +LR R+ GA+ G + +DD++ ++RP P
Sbjct 9 FAAVAVAGDGGWDVRELPEKSLNSLAELVKDLRANRAEGALVGFVCMDDDWCAVLRPVPG 68
Query 72 GTRLLLSDATAALDYDIAAEVLDNLDAEIDPEDLEDA--DPFEEGDLGLLSDIGLPEAVL 129
G RLL+SDATAALDY +A ++LD LD + E+ ++ +P+ EGD LL D+G+PE +L
Sbjct 69 GVRLLISDATAALDYYLATDILDELDVDTPTEEEAESTDEPWPEGDFDLLEDLGVPEQLL 128
Query 130 GVILDETDLYADEQLGRIAREMGFADQLSAVI 161
VI D+ DLYA EQL R+A E+G A+ L+ +
Sbjct 129 SVIFDDEDLYASEQLMRVAEELGCAEDLADAV 160
Lambda K H
0.318 0.139 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128142534078
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40