BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3756c Length=239 Score E Sequences producing significant alignments: (Bits) Value gi|15610892|ref|NP_218273.1| osmoprotectant (glycine betaine/car... 450 7e-125 gi|308232557|ref|ZP_07416453.2| osmoprotectant proZ [Mycobacteri... 449 2e-124 gi|41406373|ref|NP_959209.1| ProZ [Mycobacterium avium subsp. pa... 313 2e-83 gi|342860001|ref|ZP_08716653.1| ABC transporter permease [Mycoba... 312 2e-83 gi|183985267|ref|YP_001853558.1| osmoprotectant (glycine betaine... 301 7e-80 gi|118619514|ref|YP_907846.1| osmoprotectant (glycine betaine/ca... 299 3e-79 gi|254822449|ref|ZP_05227450.1| ABC transporter, permease protei... 291 6e-77 gi|108801927|ref|YP_642124.1| binding-protein-dependent transpor... 275 4e-72 gi|240168515|ref|ZP_04747174.1| putative osmoprotectant (glycine... 267 1e-69 gi|145221802|ref|YP_001132480.1| binding-protein-dependent trans... 255 4e-66 gi|118473767|ref|YP_890548.1| ABC transporter permease [Mycobact... 252 3e-65 gi|120406540|ref|YP_956369.1| binding-protein-dependent transpor... 247 8e-64 gi|296166874|ref|ZP_06849291.1| glycine betaine/L-proline ABC su... 243 2e-62 gi|226307618|ref|YP_002767578.1| ABC transporter permease protei... 238 4e-61 gi|111022964|ref|YP_705936.1| amino acid ABC transporter permeas... 223 2e-56 gi|226365470|ref|YP_002783253.1| ABC transporter permease protei... 223 2e-56 gi|325676403|ref|ZP_08156081.1| glycine betaine/L-proline ABC su... 216 3e-54 gi|169627369|ref|YP_001701018.1| osmoprotectant ABC transporter ... 215 4e-54 gi|312138890|ref|YP_004006226.1| glycine/betaine ABC transporter... 214 1e-53 gi|325964041|ref|YP_004241947.1| ABC-type proline/glycine betain... 207 8e-52 gi|331698882|ref|YP_004335121.1| ABC transporter integral membra... 201 1e-49 gi|163839893|ref|YP_001624298.1| glycine betaine transport syste... 199 2e-49 gi|326329326|ref|ZP_08195651.1| proline/glycine betaine ABC tran... 196 4e-48 gi|284034633|ref|YP_003384564.1| binding-protein-dependent trans... 191 6e-47 gi|302557623|ref|ZP_07309965.1| proline/glycine betaine ABC tran... 190 2e-46 gi|116671386|ref|YP_832319.1| binding-protein-dependent transpor... 189 2e-46 gi|220913300|ref|YP_002488609.1| binding-protein-dependent trans... 186 3e-45 gi|21224394|ref|NP_630173.1| ABC transporter permease [Streptomy... 185 6e-45 gi|148272712|ref|YP_001222273.1| putative proline/glycine/betain... 184 1e-44 gi|289768295|ref|ZP_06527673.1| ABC transporter permease [Strept... 183 2e-44 gi|88855059|ref|ZP_01129724.1| ABC-type glycine betaine transpor... 179 3e-43 gi|302544839|ref|ZP_07297181.1| proline/glycine betaine ABC tran... 177 1e-42 gi|29830050|ref|NP_824684.1| ABC transporter permease [Streptomy... 176 3e-42 gi|297157952|gb|ADI07664.1| ABC transporter permease [Streptomyc... 176 4e-42 gi|291436535|ref|ZP_06575925.1| ABC transport permease [Streptom... 175 4e-42 gi|269217726|ref|ZP_06161580.1| proline/glycine betaine ABC tran... 174 8e-42 gi|345015712|ref|YP_004818066.1| ABC transporter integral membra... 174 9e-42 gi|302554941|ref|ZP_07307283.1| ABC transporter permease [Strept... 173 2e-41 gi|29828725|ref|NP_823359.1| ABC transporter permease [Streptomy... 172 3e-41 gi|119960669|ref|YP_948525.1| ABC-type proline/glycine betaine t... 172 4e-41 gi|239986000|ref|ZP_04706664.1| ABC transporter permease [Strept... 171 6e-41 gi|111019582|ref|YP_702554.1| amino acid ABC transporter permeas... 171 7e-41 gi|317123455|ref|YP_004097567.1| binding-protein-dependent trans... 170 1e-40 gi|257070098|ref|YP_003156353.1| ABC-type proline/glycine betain... 170 2e-40 gi|226361730|ref|YP_002779508.1| ABC transporter permease protei... 169 3e-40 gi|282853469|ref|ZP_06262806.1| ABC transporter, permease protei... 169 3e-40 gi|297203146|ref|ZP_06920543.1| ABC transporter permease [Strept... 168 5e-40 gi|50954890|ref|YP_062178.1| ABC-type glycine betaine transport,... 168 6e-40 gi|344997743|ref|YP_004800597.1| binding-protein-dependent trans... 168 6e-40 gi|311112853|ref|YP_003984075.1| glycine betaine/choline ABC tra... 168 6e-40 >gi|15610892|ref|NP_218273.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter PROZ [Mycobacterium tuberculosis H37Rv] gi|15843376|ref|NP_338413.1| amino acid ABC transporter, permease protein [Mycobacterium tuberculosis CDC1551] gi|31794926|ref|NP_857419.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter PROZ [Mycobacterium bovis AF2122/97] 62 more sequence titles Length=239 Score = 450 bits (1158), Expect = 7e-125, Method: Compositional matrix adjust. Identities = 239/239 (100%), Positives = 239/239 (100%), Gaps = 0/239 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL Sbjct 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV Sbjct 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI Sbjct 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKLAAVVDKPAAGGGHALR 239 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKLAAVVDKPAAGGGHALR Sbjct 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKLAAVVDKPAAGGGHALR 239 >gi|308232557|ref|ZP_07416453.2| osmoprotectant proZ [Mycobacterium tuberculosis SUMu001] gi|308369222|ref|ZP_07416985.2| osmoprotectant proZ [Mycobacterium tuberculosis SUMu002] gi|308371443|ref|ZP_07424992.2| osmoprotectant proZ [Mycobacterium tuberculosis SUMu003] 15 more sequence titles Length=262 Score = 449 bits (1155), Expect = 2e-124, Method: Compositional matrix adjust. Identities = 239/239 (100%), Positives = 239/239 (100%), Gaps = 0/239 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL Sbjct 24 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 83 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV Sbjct 84 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 143 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI Sbjct 144 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 203 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKLAAVVDKPAAGGGHALR 239 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKLAAVVDKPAAGGGHALR Sbjct 204 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKLAAVVDKPAAGGGHALR 262 >gi|41406373|ref|NP_959209.1| ProZ [Mycobacterium avium subsp. paratuberculosis K-10] gi|118465737|ref|YP_879608.1| ABC transporter permease [Mycobacterium avium 104] gi|254773330|ref|ZP_05214846.1| ABC transporter, permease protein [Mycobacterium avium subsp. avium ATCC 25291] gi|41394721|gb|AAS02592.1| ProZ [Mycobacterium avium subsp. paratuberculosis K-10] gi|118167024|gb|ABK67921.1| ABC transporter, permease protein [Mycobacterium avium 104] gi|336459997|gb|EGO38907.1| ABC-type proline/glycine betaine transport system, permease component [Mycobacterium avium subsp. paratuberculosis S397] Length=238 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 189/222 (86%), Positives = 205/222 (93%), Gaps = 0/222 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MNF+Q+A++YLL+A NWTGPVGLA R EHLEYT +AV ASALIAVPVGLLIGHTGRGTL Sbjct 1 MNFVQRAIAYLLSADNWTGPVGLAARILEHLEYTGIAVGASALIAVPVGLLIGHTGRGTL 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 LVVGAVNGLRALPTLGVLL G LLFGLGLGP LVALMLLG+P+LLA TYAGIA+V+P VV Sbjct 61 LVVGAVNGLRALPTLGVLLFGTLLFGLGLGPSLVALMLLGVPALLAGTYAGIANVEPTVV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAARAMGMTESQVLLRVEVPNALPL+LGGLRSATLQVVATATVAAYASLGGLG YLIDGI Sbjct 121 DAARAMGMTESQVLLRVEVPNALPLILGGLRSATLQVVATATVAAYASLGGLGRYLIDGI 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRK 222 KER FH+ALVGA+ VAALAL LDGLLA+A W SVPGTGR+R+ Sbjct 181 KEREFHLALVGALTVAALALVLDGLLAVAVWASVPGTGRLRR 222 >gi|342860001|ref|ZP_08716653.1| ABC transporter permease [Mycobacterium colombiense CECT 3035] gi|342132379|gb|EGT85608.1| ABC transporter permease [Mycobacterium colombiense CECT 3035] Length=238 Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 188/236 (80%), Positives = 212/236 (90%), Gaps = 0/236 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MNF+++A+SYLLTA NWTGPVGLA R EHLEYTA+AV ASALIAVPVGL+IGHTGRGTL Sbjct 1 MNFVERAISYLLTADNWTGPVGLAARILEHLEYTALAVGASALIAVPVGLIIGHTGRGTL 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 LVVGAVNGLR+LPTLGVLL G LLFGLGLGP LVALMLLG+P+LLA TYAG+A+V+P VV Sbjct 61 LVVGAVNGLRSLPTLGVLLFGTLLFGLGLGPSLVALMLLGVPALLAGTYAGVANVEPTVV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAARAMGMTE+QVLLR E+PNALPL+LGGLR+ATLQVVATATVAAYASLGGLG YLIDGI Sbjct 121 DAARAMGMTEAQVLLRAELPNALPLILGGLRNATLQVVATATVAAYASLGGLGRYLIDGI 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKLAAVVDKPAAGGGH 236 KER FH+ALVGA+MVAALAL LDGLLA+A WVSVPGTGR+R+ + + AG + Sbjct 181 KEREFHLALVGALMVAALALVLDGLLAVAVWVSVPGTGRLRRTYRALPQRFAGTSY 236 >gi|183985267|ref|YP_001853558.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProZ [Mycobacterium marinum M] gi|183178593|gb|ACC43703.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProZ [Mycobacterium marinum M] Length=248 Score = 301 bits (770), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 200/248 (81%), Positives = 217/248 (88%), Gaps = 9/248 (3%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MNFLQQALSYL TA+NWTG GLA RT EHLEYTA+AV ASAL+A+P+GL+IGHTGRG L Sbjct 1 MNFLQQALSYLSTAANWTGSAGLAHRTAEHLEYTALAVTASALVAIPIGLIIGHTGRGQL 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 LVV AVNGLRALPTLGVLLLGVLLFGLGLGPP+VALMLLG+P LLA TYAGIASVDPLVV Sbjct 61 LVVSAVNGLRALPTLGVLLLGVLLFGLGLGPPIVALMLLGMPPLLAGTYAGIASVDPLVV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAARAMGMTE+QV+LRVE+PNALPL+LGGLRSATLQVVATATVAAYASLGGLG YLIDGI Sbjct 121 DAARAMGMTEAQVVLRVEMPNALPLILGGLRSATLQVVATATVAAYASLGGLGRYLIDGI 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKL---------AAVVDKPA 231 KER+FHIALVGA+MVAALAL+LDGLLALAGW SVPGTGR+ + AV A Sbjct 181 KERQFHIALVGALMVAALALSLDGLLALAGWASVPGTGRLSRFWHQSDDRIDVAVSPNSA 240 Query 232 AGGGHALR 239 A G H LR Sbjct 241 AVGSHVLR 248 >gi|118619514|ref|YP_907846.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProZ [Mycobacterium ulcerans Agy99] gi|118571624|gb|ABL06375.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProZ [Mycobacterium ulcerans Agy99] Length=248 Score = 299 bits (765), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 197/248 (80%), Positives = 214/248 (87%), Gaps = 9/248 (3%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MNFLQQALSYL TA+NWTG GLA RT EHLEYTA+A ASAL+A+P+GL+IGHTGRG L Sbjct 1 MNFLQQALSYLSTAANWTGSAGLAHRTAEHLEYTALAATASALVAIPIGLIIGHTGRGQL 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 LVV AVNGLRALPTLGVLLLGVLLFGLGLGPP+VALMLLG+P LLA TYAGIASVDPLVV Sbjct 61 LVVSAVNGLRALPTLGVLLLGVLLFGLGLGPPIVALMLLGMPPLLAGTYAGIASVDPLVV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAARAMGMTE+QV+LRVE+PNALPL+LGGLRSATLQVVAT TVAAYASLGGLG YLIDGI Sbjct 121 DAARAMGMTEAQVVLRVEMPNALPLILGGLRSATLQVVATVTVAAYASLGGLGRYLIDGI 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKL---------AAVVDKPA 231 KER+ HIALVGA+MVAALAL+LDGLLALAGW SVPGTGR+ + AV A Sbjct 181 KERQSHIALVGALMVAALALSLDGLLALAGWASVPGTGRVSRFWHQPDDRIDVAVSANSA 240 Query 232 AGGGHALR 239 A G H LR Sbjct 241 AVGSHVLR 248 >gi|254822449|ref|ZP_05227450.1| ABC transporter, permease protein [Mycobacterium intracellulare ATCC 13950] Length=238 Score = 291 bits (744), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 189/236 (81%), Positives = 208/236 (89%), Gaps = 0/236 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MNF+ +A+SY+LT NWTGPVGLA R EHLEYTA+AV ASALIAVPVGL+IGHTGRGTL Sbjct 1 MNFVDRAISYVLTVDNWTGPVGLAARILEHLEYTAIAVGASALIAVPVGLVIGHTGRGTL 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 VVGAVNGLR+LPTLGVLL G LLFGLGLGP LVALMLLG+P+LLA TYAGIA+VDP VV Sbjct 61 FVVGAVNGLRSLPTLGVLLFGTLLFGLGLGPSLVALMLLGVPALLAGTYAGIANVDPTVV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAARAMGMTE+QVLLRVEVPNALPLMLGGLR+ATLQVVATATVAAYASLGGLG YLIDGI Sbjct 121 DAARAMGMTEAQVLLRVEVPNALPLMLGGLRNATLQVVATATVAAYASLGGLGRYLIDGI 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKLAAVVDKPAAGGGH 236 KER FH+ALVGA+MVAALAL LDGLLAL W SVPGTGR+R+ + + AG + Sbjct 181 KEREFHLALVGALMVAALALVLDGLLALLVWASVPGTGRLRRTYRTLPQRFAGTSY 236 >gi|108801927|ref|YP_642124.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. MCS] gi|119871079|ref|YP_941031.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. KMS] gi|126437908|ref|YP_001073599.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. JLS] gi|108772346|gb|ABG11068.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. MCS] gi|119697168|gb|ABL94241.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. KMS] gi|126237708|gb|ABO01109.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium sp. JLS] Length=264 Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 175/239 (74%), Positives = 199/239 (84%), Gaps = 1/239 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MNFL +ALS++ TA+NW GP GL R EHLEYT +AV SALIAVP+G++IGHTG+GT Sbjct 1 MNFLSEALSFIFTAANWAGPAGLGARIVEHLEYTVIAVVFSALIAVPLGMIIGHTGKGTF 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 LVV VN LRALPTLGVLLLGVLL+GLGL P VALMLLGIP LLA TY+GIA+VDP VV Sbjct 61 LVVTGVNALRALPTLGVLLLGVLLWGLGLVGPTVALMLLGIPPLLAGTYSGIANVDPAVV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAAR+MGMTE +VLLRVEVP ALPL+LGGLR+ATLQ+VATATVAAYASLGGLG YLIDGI Sbjct 121 DAARSMGMTERRVLLRVEVPIALPLILGGLRTATLQIVATATVAAYASLGGLGRYLIDGI 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKLAAVVDKPAAGGGHALR 239 K R F++ALVGA+MV ALAL LDGLLA A W+SVPGTGR R+ AA + +P G AL Sbjct 181 KVREFYLALVGALMVTALALILDGLLAFAVWLSVPGTGRWRR-AARMPQPLLGDEVALE 238 >gi|240168515|ref|ZP_04747174.1| putative osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral [Mycobacterium kansasii ATCC 12478] Length=251 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 192/247 (78%), Positives = 212/247 (86%), Gaps = 9/247 (3%) Query 2 NFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLL 61 NFL+Q SY+ TA+NWTGP GLA RT EHLEYTA+AVAA+A+IAVP+G+LIGHTGRG +L Sbjct 5 NFLEQTWSYISTAANWTGPDGLAARTLEHLEYTALAVAAAAVIAVPIGMLIGHTGRGQVL 64 Query 62 VVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVD 121 VVG VNGLRALPTLGVLLLGVL+FGLG+GPP+ ALMLLGIPSLLA TYAGIA VDPLVVD Sbjct 65 VVGVVNGLRALPTLGVLLLGVLVFGLGIGPPIAALMLLGIPSLLAGTYAGIAGVDPLVVD 124 Query 122 AARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGIK 181 AARAMGMTE +VLLRVE+PNA+PL+LGGLRSATLQVVATATVAAYASLGGLG YLIDGIK Sbjct 125 AARAMGMTEPRVLLRVELPNAMPLLLGGLRSATLQVVATATVAAYASLGGLGRYLIDGIK 184 Query 182 ERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKLAA---------VVDKPAA 232 ER+FHIALVGA+MVAALAL LDG+LALA W S PGTGR+RK A V AA Sbjct 185 ERQFHIALVGAVMVAALALLLDGVLALAVWASAPGTGRLRKPVARPNREIDVSVSSNSAA 244 Query 233 GGGHALR 239 GH LR Sbjct 245 VAGHVLR 251 >gi|145221802|ref|YP_001132480.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium gilvum PYR-GCK] gi|315446461|ref|YP_004079340.1| ABC-type proline/glycine betaine transporter, permease [Mycobacterium sp. Spyr1] gi|145214288|gb|ABP43692.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium gilvum PYR-GCK] gi|315264764|gb|ADU01506.1| ABC-type proline/glycine betaine transport system, permease component [Mycobacterium sp. Spyr1] Length=257 Score = 255 bits (651), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 169/226 (75%), Positives = 193/226 (86%), Gaps = 0/226 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MNFLQ+ALS++ TA+NW GP GL R EHL+YT +AV SALIAVP+G+LIGHTGRGT Sbjct 1 MNFLQEALSFIFTAANWAGPAGLTARILEHLQYTVIAVFFSALIAVPLGMLIGHTGRGTF 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 +VV VN LRALPTLGVLLLGVLL+GLGL PP VALMLLGIP LLA TY+GIA+VD VV Sbjct 61 VVVTGVNALRALPTLGVLLLGVLLWGLGLIPPTVALMLLGIPPLLAGTYSGIANVDRSVV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAAR+MGMTES++LLRVE PNALPL+LGGLR+ATLQ+VATATVAAYASLGGLG YLIDGI Sbjct 121 DAARSMGMTESRILLRVETPNALPLILGGLRTATLQIVATATVAAYASLGGLGRYLIDGI 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKLAAV 226 K R F++ALVGA+MV ALAL LD LLA A W SVPGTGR+ + A+ Sbjct 181 KVREFYLALVGALMVTALALILDALLAFAVWASVPGTGRLSRRRAM 226 >gi|118473767|ref|YP_890548.1| ABC transporter permease [Mycobacterium smegmatis str. MC2 155] gi|118175054|gb|ABK75950.1| ABC transporter, permease protein ProZ [Mycobacterium smegmatis str. MC2 155] Length=268 Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 167/215 (78%), Positives = 186/215 (87%), Gaps = 0/215 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MNFLQQAL+++ TA NW GP GL R EHLEYTAVAV SALIAVP+G++IGHTGRGT Sbjct 1 MNFLQQALAFIFTAENWAGPSGLGARIVEHLEYTAVAVFFSALIAVPLGMVIGHTGRGTF 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 LVV VN LRALPTLGVLLLGVLL+GLGL PP VALMLLGIP LLA TYAG+A+V+ VV Sbjct 61 LVVTGVNALRALPTLGVLLLGVLLWGLGLVPPTVALMLLGIPPLLAGTYAGVANVERTVV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAAR+MGMTES++LLRVEVPNALPL+LGGLR++TLQ+VATATVAAYASLGGLG YLIDGI Sbjct 121 DAARSMGMTESRILLRVEVPNALPLILGGLRTSTLQIVATATVAAYASLGGLGRYLIDGI 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVP 215 K R FHIALVGA+MV ALAL LD LA A W+SVP Sbjct 181 KIREFHIALVGAIMVTALALILDAALAFAVWLSVP 215 >gi|120406540|ref|YP_956369.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium vanbaalenii PYR-1] gi|119959358|gb|ABM16363.1| binding-protein-dependent transport systems inner membrane component [Mycobacterium vanbaalenii PYR-1] Length=264 Score = 247 bits (631), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 164/222 (74%), Positives = 190/222 (86%), Gaps = 0/222 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MNFLQ+ALS++ TA+NW GP GL+ R EHL+YT +AV SA+IAVP+G+LIGHTGRGT Sbjct 1 MNFLQEALSFIFTAANWGGPAGLSARILEHLQYTVIAVFFSAVIAVPLGMLIGHTGRGTF 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 +VV VN LRALPTLGVLLLGVLL+GLGL PP VALMLLGIP LLA TY+GIA+VD VV Sbjct 61 VVVTGVNALRALPTLGVLLLGVLLWGLGLIPPTVALMLLGIPPLLAGTYSGIANVDRDVV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAARAMGMTES++LLRVE P A+PL+LGGLR+ATLQ+VATATVAAYASLGGLG YLIDGI Sbjct 121 DAARAMGMTESRILLRVETPIAMPLILGGLRTATLQIVATATVAAYASLGGLGRYLIDGI 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRK 222 K R F++ALVGA+MV ALAL LD LA A W SVPG+GR+ + Sbjct 181 KVREFYLALVGALMVTALALILDAALAFAVWASVPGSGRLHR 222 >gi|296166874|ref|ZP_06849291.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, permease protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897751|gb|EFG77340.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, permease protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=237 Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 182/222 (82%), Positives = 200/222 (91%), Gaps = 1/222 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MNF+Q A+SYLLT NWTGPVG+A R EHLEYTA+AV ASALIAVP GL+IGHTGRGTL Sbjct 1 MNFVQGAISYLLTVDNWTGPVGIAARILEHLEYTAIAVGASALIAVPAGLIIGHTGRGTL 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 LVVGAVNGLRALPTLGVLLLG LLFGLGLGPPLVALMLLG+P+LLA TYAGIA+V+P VV Sbjct 61 LVVGAVNGLRALPTLGVLLLGTLLFGLGLGPPLVALMLLGVPALLAGTYAGIANVEPAVV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAARAMGMTE+QVL VE NA+PL+LGGLRSATLQVVATATVAAYASLGGLG YLIDGI Sbjct 121 DAARAMGMTEAQVLW-VEARNAMPLILGGLRSATLQVVATATVAAYASLGGLGRYLIDGI 179 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRK 222 KER F++ALVGA++VAALAL LDGLLA+ W SVPGTGR+R Sbjct 180 KEREFYLALVGALLVAALALALDGLLAVTVWASVPGTGRLRH 221 >gi|226307618|ref|YP_002767578.1| ABC transporter permease protein [Rhodococcus erythropolis PR4] gi|229493747|ref|ZP_04387529.1| ABC amino acid transport system, permease protein [Rhodococcus erythropolis SK121] gi|226186735|dbj|BAH34839.1| putative ABC transporter permease protein [Rhodococcus erythropolis PR4] gi|229319347|gb|EEN85186.1| ABC amino acid transport system, permease protein [Rhodococcus erythropolis SK121] Length=229 Score = 238 bits (608), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 136/222 (62%), Positives = 173/222 (78%), Gaps = 0/222 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 M+ A +++ NW+G G+ R +HL Y+ +AVA SA+IAVP+GLLIGH RG + Sbjct 1 MSIFTGAWDFIVDPGNWSGDTGIGTRILQHLWYSVLAVALSAVIAVPIGLLIGHLRRGEI 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 +VV VN LR+LPTLG+L VLL GLG+ PP++AL++LGIP LLA TYAGIASVD VV Sbjct 61 VVVSLVNALRSLPTLGLLTFLVLLMGLGVMPPILALVILGIPPLLAGTYAGIASVDRGVV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 +AARAMGMTE QVL RVE+PNALPL+LGGLR+ATLQV+ATATVAAY +LGGLG Y+ DG+ Sbjct 121 EAARAMGMTELQVLFRVEIPNALPLILGGLRNATLQVIATATVAAYVNLGGLGRYIFDGL 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRK 222 ++ +VGA++VA +AL +DGLLAL W SVPGTGR+R+ Sbjct 181 ALYKYDRVVVGAILVAVVALVVDGLLALVVWASVPGTGRLRR 222 >gi|111022964|ref|YP_705936.1| amino acid ABC transporter permease [Rhodococcus jostii RHA1] gi|110822494|gb|ABG97778.1| ABC amino acid transport system, permease protein [Rhodococcus jostii RHA1] Length=230 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 139/222 (63%), Positives = 174/222 (79%), Gaps = 0/222 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MN A Y++ NW+G G+ R EHL Y+ +AVA SA++AVP+GL+IGH +G + Sbjct 1 MNIFGGAWEYIVDPGNWSGSTGIGARILEHLWYSFLAVALSAVVAVPIGLIIGHLRKGDV 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 +VVG VN LR+LPTLG+L VLL GLGL PP++AL++LGIP +LA TYAG+A+VD VV Sbjct 61 VVVGLVNALRSLPTLGLLTFLVLLLGLGLIPPILALVILGIPPVLAGTYAGVANVDRTVV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAARAMGMTE QVL RVE PNALPLMLGGLR+ATLQ++ATATVAAY +LGGLG Y+ DG+ Sbjct 121 DAARAMGMTEWQVLTRVEAPNALPLMLGGLRNATLQIIATATVAAYVNLGGLGRYIFDGL 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRK 222 R++ LVGA++V LAL +DGLLALA W SVPGTGR+R+ Sbjct 181 ALRQYDRVLVGALLVTILALVVDGLLALAVWASVPGTGRLRR 222 >gi|226365470|ref|YP_002783253.1| ABC transporter permease protein [Rhodococcus opacus B4] gi|226243960|dbj|BAH54308.1| putative ABC transporter permease protein [Rhodococcus opacus B4] Length=233 Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 140/226 (62%), Positives = 175/226 (78%), Gaps = 0/226 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MN A Y+ NW+G G+ R EHL Y+ +AVA SA++AVP+GL+IGH +G + Sbjct 1 MNIFGGAWEYIADPGNWSGSTGIGARILEHLWYSFLAVALSAVVAVPIGLIIGHLRKGDV 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 +VVG VN LR+LPTLG+L VLL GLGL PP++AL++LGIP +LA TYAG+A+VD VV Sbjct 61 VVVGLVNALRSLPTLGLLTFLVLLLGLGLIPPILALVILGIPPVLAGTYAGVANVDRTVV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAARAMGMTE QVL RVE PNALPLMLGGLR+ATLQ++ATATVAAY +LGGLG Y+ DG+ Sbjct 121 DAARAMGMTEWQVLTRVETPNALPLMLGGLRNATLQIIATATVAAYVNLGGLGRYIFDGL 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKLAAV 226 R++ LVGA++V LAL +DGLLALA W SVPGTGR+R+ +V Sbjct 181 ALRQYDRVLVGALLVTILALVVDGLLALAVWASVPGTGRLRRKPSV 226 >gi|325676403|ref|ZP_08156081.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] gi|325552581|gb|EGD22265.1| glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, permease protein [Rhodococcus equi ATCC 33707] Length=235 Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 147/224 (66%), Positives = 176/224 (79%), Gaps = 0/224 (0%) Query 3 FLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLLV 62 A YL+ +NW GP G+ R +HL Y+ +AVA +A+IAVP+GL IGH RG ++V Sbjct 1 MFTSAWDYLVDPANWQGPTGIGARILQHLWYSLLAVAGAAVIAVPIGLAIGHFRRGEIVV 60 Query 63 VGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVDA 122 VGAVN LR+LPTLGVL L VLL GLGL PP++AL+LLGIP LLA YAG+A+VD VVDA Sbjct 61 VGAVNALRSLPTLGVLTLLVLLLGLGLVPPILALVLLGIPPLLAGAYAGVANVDRQVVDA 120 Query 123 ARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGIKE 182 A AMGMT QVLLRVEVPNALPL+LGGLRSATLQV+ATATVAAY +LGGLG Y+ DG+ Sbjct 121 AEAMGMTTRQVLLRVEVPNALPLILGGLRSATLQVIATATVAAYVNLGGLGRYIFDGLAL 180 Query 183 RRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKLAAV 226 R + LVGA++VAALAL +DGLLA A W SVPGTGR+R+ AA+ Sbjct 181 RSYDRVLVGALLVAALALIVDGLLAAAVWASVPGTGRLRRPAAI 224 >gi|169627369|ref|YP_001701018.1| osmoprotectant ABC transporter ProZ [Mycobacterium abscessus ATCC 19977] gi|169239336|emb|CAM60364.1| Possible osmoprotectant (glycine betaine/ carnitine/choline/l-proline) ABC transporter ProZ [Mycobacterium abscessus] Length=250 Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 170/238 (72%), Positives = 195/238 (82%), Gaps = 4/238 (1%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MNFL AL Y+ TAS+W G GL VR EHLEYTA+AV A+ +IAVP+GL IGHTGRG Sbjct 1 MNFLSNALGYIFTASHWAGSSGLGVRIGEHLEYTALAVLAAVVIAVPLGLFIGHTGRGIF 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 LVV AVN LRALPTLG+LLLGVLL+GLGL PP VAL+LLG+P LLA TY+GIA+VD VV Sbjct 61 LVVSAVNALRALPTLGMLLLGVLLWGLGLVPPTVALLLLGVPPLLAGTYSGIANVDRTVV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 +AARAMGMTE QVL VEVPNALPL+L GLR+ATLQVVATATVAAYASLGGLG YLIDGI Sbjct 121 EAARAMGMTERQVLFGVEVPNALPLILSGLRTATLQVVATATVAAYASLGGLGRYLIDGI 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKLAAVVDKPAAGGGHAL 238 K R+FH+ALVGA+MV ALAL LD +LALA W+S PGTGR+R + + D+ GHA+ Sbjct 181 KVRQFHLALVGAIMVTALALLLDAVLALAVWLSAPGTGRLRPVPDLPDRE----GHAV 234 >gi|312138890|ref|YP_004006226.1| glycine/betaine ABC transporter integral membrane subunit [Rhodococcus equi 103S] gi|311888229|emb|CBH47541.1| putative ABC-type glycine betaine transporter integral membrane subunit [Rhodococcus equi 103S] Length=235 Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 146/224 (66%), Positives = 175/224 (79%), Gaps = 0/224 (0%) Query 3 FLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLLV 62 A YL+ +NW GP G+ R +HL Y+ +AVA +A+IAVP+GL IGH RG ++V Sbjct 1 MFTSAWDYLVDPANWQGPTGIGARILQHLWYSLLAVAGAAVIAVPIGLAIGHFRRGEIVV 60 Query 63 VGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVDA 122 VGAVN LR+LPTLGVL L VLL GLGL PP++AL+LLGIP LLA YAG+A+VD VVDA Sbjct 61 VGAVNALRSLPTLGVLTLLVLLLGLGLVPPILALVLLGIPPLLAGAYAGVANVDRQVVDA 120 Query 123 ARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGIKE 182 A AMGMT QVLLRVEVPNALPL+LGGLRSATLQV+ATATVAAY +LGGLG Y+ DG+ Sbjct 121 AEAMGMTTRQVLLRVEVPNALPLILGGLRSATLQVIATATVAAYVNLGGLGRYIFDGLAL 180 Query 183 RRFHIALVGAMMVAALALTLDGLLALAGWVSVPGTGRMRKLAAV 226 R + LVGA++VAALAL +DGLLA A W S PGTGR+R+ AA+ Sbjct 181 RSYDRVLVGALLVAALALIVDGLLAAAVWASAPGTGRLRRPAAI 224 >gi|325964041|ref|YP_004241947.1| ABC-type proline/glycine betaine transporter, permease [Arthrobacter phenanthrenivorans Sphe3] gi|323470128|gb|ADX73813.1| ABC-type proline/glycine betaine transport system, permease component [Arthrobacter phenanthrenivorans Sphe3] Length=247 Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 113/208 (55%), Positives = 146/208 (71%), Gaps = 0/208 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 M+ ++L NWTG G+ R EHL+YT + + +A IAVPVGL +GHTGRG + Sbjct 1 MSVFSDTFAWLADPENWTGSAGIPARLAEHLQYTGLVMLIAAAIAVPVGLYVGHTGRGRV 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 VV LRALPTLG+L L VL+ G+GL PP+ AL++L +P LLA TYAGI+SVD VV Sbjct 61 AVVALAGALRALPTLGLLTLFVLVAGIGLMPPIWALVILTVPPLLAGTYAGISSVDRTVV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAARAMGMTE QVL R E+PNAL +M GG R+ LQV+AT +V AY +LGGLG YL DG+ Sbjct 121 DAARAMGMTELQVLFRAELPNALTVMFGGFRTGVLQVIATVSVVAYINLGGLGRYLFDGL 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLAL 208 F L G++++AALA+ +D +L+L Sbjct 181 VLSDFPQMLGGSLLIAALAIAVDLVLSL 208 >gi|331698882|ref|YP_004335121.1| ABC transporter integral membrane subunit [Pseudonocardia dioxanivorans CB1190] gi|326953571|gb|AEA27268.1| ABC-type transporter, integral membrane subunit [Pseudonocardia dioxanivorans CB1190] Length=238 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 124/243 (52%), Positives = 162/243 (67%), Gaps = 12/243 (4%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MNFL +L+ ++W+GP + R EHL YTA+ + + IAVP+G IGHTG+G Sbjct 1 MNFL----GWLVDPAHWSGPGSIPQRLVEHLGYTALVMIIAIAIAVPLGAWIGHTGKGGF 56 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 LVVG+ NGLRALPTLGVL+L V GLG+ PLVAL+LL IP +LA TYAG+ +VD VV Sbjct 57 LVVGSANGLRALPTLGVLVLLVQWTGLGIIGPLVALVLLAIPPVLAGTYAGVRNVDAAVV 116 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAAR MGM VL VE+PNALPL++GG+RS+ LQV++TAT+AAY L GLG Y+IDG+ Sbjct 117 DAARGMGMRGRGVLFGVELPNALPLIIGGVRSSVLQVISTATIAAYVGLDGLGRYIIDGL 176 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSV---PG---TGRMRKLAAVVDKPAAGG 234 R F + G+++VA LA+ D LALAG + PG G R++ A+ +P Sbjct 177 STRDFPQMIAGSILVALLAVVAD--LALAGLQKLLVSPGLQTAGTGRRVRALATRPTDNA 234 Query 235 GHA 237 A Sbjct 235 ARA 237 >gi|163839893|ref|YP_001624298.1| glycine betaine transport system permease protein [Renibacterium salmoninarum ATCC 33209] gi|162953369|gb|ABY22884.1| Glycine betaine transport system permease protein [Renibacterium salmoninarum ATCC 33209] Length=269 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 107/211 (51%), Positives = 144/211 (69%), Gaps = 1/211 (0%) Query 6 QALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLLVVGA 65 Q + +L A NW G G+ +R EHL Y+A+ + + +IA+P+GL +GHTGRG +++V Sbjct 28 QGIQWLFDAQNWQGANGIPLRLVEHLGYSALTIGLALIIAIPIGLYVGHTGRGKVIIVSL 87 Query 66 VNGLRALPTLG-VLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVDAAR 124 LRALPTLG V+L +L L L PP+ AL+LL IP +L YAGI+SVDP +VDAAR Sbjct 88 AGMLRALPTLGLVILFALLTSPLALMPPIWALVLLAIPPILTGVYAGISSVDPDIVDAAR 147 Query 125 AMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGIKERR 184 +MGM+E+QVL RVEVPN L +MLGG R LQV+AT V AY GGLG +++ G+K Sbjct 148 SMGMSEAQVLFRVEVPNGLKVMLGGFRGCVLQVIATVAVVAYLPQGGLGRFIVTGLKSYD 207 Query 185 FHIALVGAMMVAALALTLDGLLALAGWVSVP 215 + GA+++A LA+ LDG+LAL V VP Sbjct 208 YGSVFGGAVVIAVLAIVLDGVLALVTRVVVP 238 >gi|326329326|ref|ZP_08195651.1| proline/glycine betaine ABC transporter, permease protein [Nocardioidaceae bacterium Broad-1] gi|325952901|gb|EGD44916.1| proline/glycine betaine ABC transporter, permease protein [Nocardioidaceae bacterium Broad-1] Length=235 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 111/203 (55%), Positives = 149/203 (74%), Gaps = 2/203 (0%) Query 7 ALSYLLTASNW--TGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLLVVG 64 +L YLL A+NW T G R EHL YT +++ +A+IA P+GLLIGHTGRG L+ + Sbjct 2 SLDYLLDAANWSLTSLDGFPQRILEHLGYTFLSLVIAAVIAFPIGLLIGHTGRGALIAIN 61 Query 65 AVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVDAAR 124 N RALPTLGVL+L + L G+GL P +AL++L IP +LA+TYAGI +V VDAAR Sbjct 62 LGNAGRALPTLGVLMLALGLVGIGLVPVTIALVVLAIPPILATTYAGIRAVADETVDAAR 121 Query 125 AMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGIKERR 184 +GMTESQ+ RVEVP ALP+++GGLR+A+LQVV+TAT+AAYA LGGLG YL DG+ + Sbjct 122 GVGMTESQIAWRVEVPIALPIIIGGLRNASLQVVSTATIAAYAGLGGLGRYLFDGLATLQ 181 Query 185 FHIALVGAMMVAALALTLDGLLA 207 + + GA+++A LA+ +D +LA Sbjct 182 YDQVVAGAIVLAVLAVLIDLVLA 204 >gi|284034633|ref|YP_003384564.1| binding-protein-dependent transport systems inner membrane component [Kribbella flavida DSM 17836] gi|283813926|gb|ADB35765.1| binding-protein-dependent transport systems inner membrane component [Kribbella flavida DSM 17836] Length=237 Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 116/221 (53%), Positives = 158/221 (72%), Gaps = 2/221 (0%) Query 4 LQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLLVV 63 LQ L ++ ++NW G G+ R +HL YT +++A +ALIA+P+GLLIGHT RG L + Sbjct 2 LQGFLDFISDSANWAGAEGIGNRILQHLGYTFLSLAIAALIALPIGLLIGHTRRGAFLAI 61 Query 64 GAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVDAA 123 N RALPTLG+L L VLL G+G P ++AL++LGIP ++ASTYAG++ VD +DAA Sbjct 62 NTGNAARALPTLGLLTLIVLLIGIGRVPVIIALVVLGIPPIMASTYAGVSGVDRSTIDAA 121 Query 124 RAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGIKER 183 R MGMT ++L +VE+P ALPL++ GLRSATLQ+V+TATVAAY +LGGLG Y+IDG+ R Sbjct 122 RGMGMTGREILTKVEIPIALPLIISGLRSATLQIVSTATVAAYVALGGLGRYVIDGLSLR 181 Query 184 RFHIALVGAMMVAALALTLDGLLALAGWVSVPG--TGRMRK 222 F L GA++VA LA+ LD + A +V TGR+R+ Sbjct 182 DFPQMLTGAVLVAVLAILLDLVFAAIARYAVSAGLTGRVRR 222 >gi|302557623|ref|ZP_07309965.1| proline/glycine betaine ABC transporter, permease [Streptomyces griseoflavus Tu4000] gi|302475241|gb|EFL38334.1| proline/glycine betaine ABC transporter, permease [Streptomyces griseoflavus Tu4000] Length=221 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 109/220 (50%), Positives = 148/220 (68%), Gaps = 1/220 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MN L ++ +++W G G+ R EHL+Y+ +A+A +A I +PVGLL GHTGRG Sbjct 1 MNVLDFVNAFFSDSAHWHGYDGIPQRFWEHLQYSLLALAVAAAIGLPVGLLTGHTGRGGN 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 + N RALP+ G+L+L VLL G GL P ++ L++L IP +L +TY + SVDP V Sbjct 61 ALAFIANAARALPSFGLLVLAVLLIGFGLLPVMIPLVVLAIPPILVTTYEAVRSVDPAPV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAAR MGM ES++L RVEVP ALPL+L GLRSA +Q+V+TAT+AAY SLGGLG Y+IDG+ Sbjct 121 DAARGMGMRESRILFRVEVPVALPLVLSGLRSAAIQIVSTATIAAYVSLGGLGRYIIDGL 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSV-PGTGR 219 +R + + GA +VA LAL + G ++V PG R Sbjct 181 YQRDYEKVVGGATLVAVLALATLAVFWAVGRLAVSPGVRR 220 >gi|116671386|ref|YP_832319.1| binding-protein-dependent transport systems inner membrane component [Arthrobacter sp. FB24] gi|116611495|gb|ABK04219.1| binding-protein-dependent transport systems inner membrane component [Arthrobacter sp. FB24] Length=248 Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 113/207 (55%), Positives = 143/207 (70%), Gaps = 0/207 (0%) Query 2 NFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLL 61 N ++L +W G G+ R EHL+YT + + + IAVP+GL +GHTGRG + Sbjct 3 NVFTDTFAWLGDPLHWAGSSGIPARLAEHLQYTGLVMLIATAIAVPIGLYVGHTGRGRVA 62 Query 62 VVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVD 121 VV LRALPTLG+L L VLL G+GL PP+ AL++L +P LLA TYAGIASVD VVD Sbjct 63 VVALAGALRALPTLGLLTLFVLLAGIGLMPPIWALVILTVPPLLAGTYAGIASVDRNVVD 122 Query 122 AARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGIK 181 AARAMGMTE QVL R E PNAL +M GG R+ LQV+AT +V AY +LGGLG YL DG+ Sbjct 123 AARAMGMTELQVLFRAEFPNALTVMFGGFRTGVLQVIATVSVVAYINLGGLGRYLFDGLV 182 Query 182 ERRFHIALVGAMMVAALALTLDGLLAL 208 F L G++++AALA+T+D LLA+ Sbjct 183 LSDFPQMLGGSLLIAALAITVDLLLAV 209 >gi|220913300|ref|YP_002488609.1| binding-protein-dependent transporters inner membrane component [Arthrobacter chlorophenolicus A6] gi|219860178|gb|ACL40520.1| binding-protein-dependent transport systems inner membrane component [Arthrobacter chlorophenolicus A6] Length=248 Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 111/207 (54%), Positives = 145/207 (71%), Gaps = 0/207 (0%) Query 2 NFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLL 61 N ++L +W+G +G+ VR EHL+YT + + + IAVP+GL +GHTG+G + Sbjct 3 NVFTDTFAWLADPLHWSGSMGIPVRLAEHLQYTGLVMLIATAIAVPIGLFVGHTGKGRVA 62 Query 62 VVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVD 121 VV LRALPTLG+L L VLL G+GL PP+ AL++L +P LLA TYAGI+SVD VVD Sbjct 63 VVAVAGALRALPTLGLLTLFVLLAGIGLMPPVWALVILTVPPLLAGTYAGISSVDRNVVD 122 Query 122 AARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGIK 181 AARAMGMTE QVL R E+PNAL +M GG R+ LQVVAT +V AY +LGGLG YL DG+ Sbjct 123 AARAMGMTELQVLFRAELPNALTVMFGGFRTGVLQVVATVSVVAYINLGGLGRYLFDGLV 182 Query 182 ERRFHIALVGAMMVAALALTLDGLLAL 208 F L G++++A LA+ +D +LAL Sbjct 183 LSDFPQMLGGSLLIAVLAIAVDLVLAL 209 >gi|21224394|ref|NP_630173.1| ABC transporter permease [Streptomyces coelicolor A3(2)] gi|4691390|emb|CAB41557.1| probable ABC transport permease [Streptomyces coelicolor A3(2)] Length=221 Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 106/220 (49%), Positives = 145/220 (66%), Gaps = 1/220 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MN L ++ +++W G G+ R EH++YT +A+ +A I +PVGLL GHTGRG Sbjct 1 MNVLDFVNAFFSDSAHWHGYDGIPTRLLEHVQYTLMALGLAAAIGLPVGLLTGHTGRGGN 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 V RALP+ G+L+L ++ G+GL P +V L++L +P +L +TY + SVDP V Sbjct 61 AVAFVATAARALPSFGLLVLIAVVVGIGLLPVMVPLVVLAVPPILVTTYEAVRSVDPSPV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAAR MGM ES +L RVE+P ALPL+L GLRSA +QVV+TAT+AAY SLGG+G Y+IDG+ Sbjct 121 DAARGMGMHESGILFRVELPVALPLVLSGLRSAAIQVVSTATIAAYVSLGGIGRYIIDGL 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSV-PGTGR 219 +R + + GA +VA LAL L AG +V PG R Sbjct 181 YQRDYEKVVGGATLVAVLALVTLALFWAAGRFAVSPGVRR 220 >gi|148272712|ref|YP_001222273.1| putative proline/glycine/betaine/choline ABC transporter permease [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830642|emb|CAN01578.1| putative proline/glycine/betaine/choline ABC transporter, permease component [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length=241 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 106/215 (50%), Positives = 146/215 (68%), Gaps = 0/215 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MN +A + + AS W+G G VR EHL YT +A+ +AL+AVP GL IGHTGRG Sbjct 1 MNLFAEAFALIFDASRWSGSTGTGVRLVEHLSYTFLAIFLAALVAVPAGLYIGHTGRGRT 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 + V G RALPTLGVL++ L+FG+GL P++ +LGIP LLA YAG+ +VD V Sbjct 61 IAVSLSGGFRALPTLGVLVIFGLVFGIGLTGPMITFAILGIPPLLAGVYAGLQAVDRATV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAARA+GMTE Q+L +VE+P ALPL++ G R+ATLQV++T T+ AY LGGLG + G+ Sbjct 121 DAARAVGMTEWQILGKVEIPLALPLIISGFRAATLQVISTVTLGAYLGLGGLGPDIFTGL 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVP 215 R + + + +++V LAL +DG+LA+ + VP Sbjct 181 TTRNYPLMVSASILVTVLALVVDGVLAIVQRLVVP 215 >gi|289768295|ref|ZP_06527673.1| ABC transporter permease [Streptomyces lividans TK24] gi|289698494|gb|EFD65923.1| ABC transporter permease [Streptomyces lividans TK24] Length=221 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 105/220 (48%), Positives = 144/220 (66%), Gaps = 1/220 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MN L ++ +++W G G+ R EH++YT +A+ +A I +P GLL GHTGRG Sbjct 1 MNVLDFVNAFFSDSAHWHGYDGIPTRLLEHVQYTLMALGLAAAIGLPAGLLTGHTGRGGN 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 V RALP+ G+L+L ++ G+GL P +V L++L +P +L +TY + SVDP V Sbjct 61 AVAFVATAARALPSFGLLVLIAVVVGIGLLPVMVPLVVLAVPPILVTTYEAVRSVDPSPV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAAR MGM ES +L RVE+P ALPL+L GLRSA +QVV+TAT+AAY SLGG+G Y+IDG+ Sbjct 121 DAARGMGMHESGILFRVELPVALPLVLSGLRSAAIQVVSTATIAAYVSLGGIGRYIIDGL 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSV-PGTGR 219 +R + + GA +VA LAL L AG +V PG R Sbjct 181 YQRDYEKVVGGATLVAVLALVTLALFWAAGRFAVSPGVRR 220 >gi|88855059|ref|ZP_01129724.1| ABC-type glycine betaine transport, permease protein [marine actinobacterium PHSC20C1] gi|88815587|gb|EAR25444.1| ABC-type glycine betaine transport, permease protein [marine actinobacterium PHSC20C1] Length=250 Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 116/248 (47%), Positives = 158/248 (64%), Gaps = 14/248 (5%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MN L +AL +L + G + +R EHL YT ++VA +ALIA+P+G IGHTG+G Sbjct 1 MNLLLEALQWLFSPERLEGSNPIPLRLEEHLFYTFISVALAALIAIPLGFFIGHTGKGRD 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGP----PLVALMLLGIPSLLASTYAGIASVD 116 VG RALP+ G++L VLL G+ ++A +LL IPS+LA YAG+ +VD Sbjct 61 FAVGLSGAARALPSFGLILFLVLLIGVAQAQLQFAAILAFVLLAIPSILAGAYAGVEAVD 120 Query 117 PLVVDAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYL 176 V+DAARA+GMTE Q+L +VEVP LPL++GGLR++TLQVVATAT+AAY LGGLG Y+ Sbjct 121 RRVIDAARAVGMTEWQILWKVEVPIGLPLLIGGLRASTLQVVATATLAAYVGLGGLGIYI 180 Query 177 IDGIKERRFHIALVGAMMVAALALTLDGLLALAGWVSVP---GTGRMR-------KLAAV 226 G+ +R+ L A+++AALAL LDG+ AL ++P GR + + AV Sbjct 181 FRGLPLQRYDEMLGSALLIAALALALDGIFALIQQFAIPRGVSAGRAKDVRTSSPRRRAV 240 Query 227 VDKPAAGG 234 KPA G Sbjct 241 AAKPAQEG 248 >gi|302544839|ref|ZP_07297181.1| proline/glycine betaine ABC transporter, permease [Streptomyces hygroscopicus ATCC 53653] gi|302462457|gb|EFL25550.1| proline/glycine betaine ABC transporter, permease [Streptomyces himastatinicus ATCC 53653] Length=228 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 97/186 (53%), Positives = 130/186 (70%), Gaps = 0/186 (0%) Query 10 YLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLLVVGAVNGL 69 +L + + W+GP G+A R EHL+Y+A+A +ALIA+PVGLLIGHTGRG L + Sbjct 14 WLTSGAQWSGPDGIATRLLEHLQYSALATLVAALIALPVGLLIGHTGRGAFLAINLSGFG 73 Query 70 RALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVDAARAMGMT 129 RALPT+G++ L L GL + P V+L+ L +P ++ +TYAG+A+VDP V DAAR GM Sbjct 74 RALPTVGLVTLVFLASGLSMWPVYVSLVALAVPVIVTNTYAGMAAVDPEVRDAARGQGMR 133 Query 130 ESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGIKERRFHIAL 189 QVL +VE+P ALPL++ GLR A QVVATAT+AAY S GGLG Y+ DG+ +R L Sbjct 134 WHQVLFQVELPLALPLIMTGLRLACTQVVATATIAAYVSFGGLGRYVFDGLAQRDLVQVL 193 Query 190 VGAMMV 195 GA++V Sbjct 194 GGAVLV 199 >gi|29830050|ref|NP_824684.1| ABC transporter permease [Streptomyces avermitilis MA-4680] gi|29607160|dbj|BAC71219.1| putative ABC transporter permease [Streptomyces avermitilis MA-4680] Length=239 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 91/175 (52%), Positives = 126/175 (72%), Gaps = 0/175 (0%) Query 9 SYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLLVVGAVNG 68 ++L++ WTGP G+A R EHL+Y+ +A +A IA+PVGLLIGHTGRG L + + Sbjct 17 AWLVSGDQWTGPDGIAHRLAEHLQYSLLATLVAAAIALPVGLLIGHTGRGAFLAINLASF 76 Query 69 LRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVDAARAMGM 128 RALPT+G+++L L GL + P +AL+ L +P+++ +TYAG+ +VDP V DAAR GM Sbjct 77 GRALPTVGLVVLVFLASGLSMWPVYIALVALAVPAIVTNTYAGMTAVDPDVKDAARGQGM 136 Query 129 TESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGIKER 183 QVL +VE+P ALPL++ GLR A +QVVATAT+AAY S GGLG Y+ DG+ +R Sbjct 137 RWHQVLFQVELPLALPLIMTGLRLALIQVVATATIAAYVSFGGLGRYVFDGLAQR 191 >gi|297157952|gb|ADI07664.1| ABC transporter permease [Streptomyces bingchenggensis BCW-1] Length=227 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 93/195 (48%), Positives = 132/195 (68%), Gaps = 0/195 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 + L+ + +L + S W+GP G+A R EH +Y+ +A + LIA+P+GLLIGHTGRG Sbjct 2 IELLKNLVHWLTSGSQWSGPEGIATRLLEHTQYSLLATLVATLIALPIGLLIGHTGRGAF 61 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 L + RALPT+G++ L L GL + P ++L+ L +P ++ +TYAG+A+VDP V Sbjct 62 LAINLAGFGRALPTVGLVTLVFLASGLSMWPVYISLVALAVPVIVTNTYAGMAAVDPEVK 121 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAAR GM QVL ++E+P ALPL++ GLR A +QVVATAT+AAY S GGLG Y+ DG+ Sbjct 122 DAARGQGMRAHQVLFQIELPLALPLIMTGLRLAAVQVVATATIAAYVSFGGLGRYVFDGL 181 Query 181 KERRFHIALVGAMMV 195 +R L GA++V Sbjct 182 AQRDLVQVLGGAVLV 196 >gi|291436535|ref|ZP_06575925.1| ABC transport permease [Streptomyces ghanaensis ATCC 14672] gi|291339430|gb|EFE66386.1| ABC transport permease [Streptomyces ghanaensis ATCC 14672] Length=221 Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 93/186 (50%), Positives = 129/186 (70%), Gaps = 0/186 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MN L ++ ++W G G+ R EH+ YT +A+A + I +PVGL+ GHTGRG Sbjct 1 MNVLHFINAFFSDGAHWHGYDGIPQRLLEHVRYTLLALALATAIGLPVGLVTGHTGRGGN 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 + N RALP+ G+L+L VLL G GL P ++ L++L +P +L +TY + SVDP V Sbjct 61 ALAFVANAARALPSFGLLVLAVLLIGFGLLPVMIPLVVLAVPPILVTTYEAVRSVDPSPV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAAR MGM ES++LLRVE+P ALPL+L GLRSA +Q+V+TAT+AAY SLGGLG Y++DG+ Sbjct 121 DAARGMGMRESRILLRVELPVALPLILSGLRSAAIQIVSTATIAAYVSLGGLGRYIVDGL 180 Query 181 KERRFH 186 +R + Sbjct 181 YQRDYE 186 >gi|269217726|ref|ZP_06161580.1| proline/glycine betaine ABC transporter, permease protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269212661|gb|EEZ79001.1| proline/glycine betaine ABC transporter, permease protein [Actinomyces sp. oral taxon 848 str. F0332] Length=226 Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 95/207 (46%), Positives = 142/207 (69%), Gaps = 0/207 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MN+ AL +L ++NW GP G+ R EH+ T V +A IA+P+G+++GHT RG Sbjct 1 MNYFLSALRWLADSANWRGPSGIGARLLEHMILTLGVVGIAAAIALPIGIVVGHTRRGAG 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 V V R++PTLG+L + L+FG+GL P++AL++L IPSLLA Y+GI ++DP V Sbjct 61 FVGAVVGSARSIPTLGLLTIFGLIFGIGLDAPIIALVILAIPSLLAGAYSGIQAIDPAVP 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 AA A+GM+ +QV+ RVE+P ALP+++GGLR+ LQVV+TAT+AAY + GLG +L G+ Sbjct 121 AAATAIGMSPAQVVFRVELPLALPVIVGGLRATVLQVVSTATLAAYVADWGLGRFLFAGL 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLA 207 + + + L G++ V ALA+ + LL+ Sbjct 181 RSHNYPLMLGGSLAVIALAIVCELLLS 207 >gi|345015712|ref|YP_004818066.1| ABC transporter integral membrane subunit [Streptomyces violaceusniger Tu 4113] gi|344042061|gb|AEM87786.1| ABC-type transporter, integral membrane subunit [Streptomyces violaceusniger Tu 4113] Length=225 Score = 174 bits (441), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 96/195 (50%), Positives = 132/195 (68%), Gaps = 0/195 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 + L+ L +L + S W+G G+A R EHL+Y+ +A +A IA+PVGLLIGHTGRG Sbjct 2 IELLKDLLRWLTSGSQWSGTDGIATRLLEHLQYSLLATLVAAAIALPVGLLIGHTGRGAF 61 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 L + RALPT+G++ L L GL + P ++L+ L +P ++ +TYAG+A+VDP V Sbjct 62 LAINLSGFGRALPTVGLVTLVFLASGLSMWPVYISLVALAVPVIVTNTYAGMAAVDPEVR 121 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAAR GM QVL +VE+P ALPL++ GLR A +QVVATAT+AAY S GGLG Y+ DG+ Sbjct 122 DAARGQGMRWYQVLFQVELPLALPLIMTGLRLACVQVVATATIAAYVSFGGLGRYVFDGL 181 Query 181 KERRFHIALVGAMMV 195 +R L GA++V Sbjct 182 AQRDLVQVLGGAVLV 196 >gi|302554941|ref|ZP_07307283.1| ABC transporter permease [Streptomyces viridochromogenes DSM 40736] gi|302472559|gb|EFL35652.1| ABC transporter permease [Streptomyces viridochromogenes DSM 40736] Length=221 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 100/220 (46%), Positives = 141/220 (65%), Gaps = 1/220 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MN L S+ +++W G G+ R EH+ YT A+ +A I +P+GL+ GH GRG Sbjct 1 MNVLNFVNSFFSDSAHWHGYDGIPARLGEHVRYTLQALLLAAAIGLPIGLVTGHYGRGGN 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 + RALP+ G+L+L L G G+ P ++ L++L +P +L +TY + SVDP V Sbjct 61 ALSLVATAGRALPSFGLLVLMTTLLGFGMLPVMIPLVILAVPPILVTTYEAMRSVDPSPV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAAR MGM ES++L +VE+P ALPL+L GLRSA +Q+V+TAT+AAY SLGGLG Y++DG+ Sbjct 121 DAARGMGMHESRILFQVELPVALPLILSGLRSAAIQIVSTATIAAYVSLGGLGRYIVDGL 180 Query 181 KERRFHIALVGAMMVAALAL-TLDGLLALAGWVSVPGTGR 219 +R + + GA +VA LAL TL A+A PG R Sbjct 181 YQRNYEKVVGGATLVAVLALVTLALFWAVARTAVSPGVRR 220 >gi|29828725|ref|NP_823359.1| ABC transporter permease [Streptomyces avermitilis MA-4680] gi|29605829|dbj|BAC69894.1| putative ABC transporter permease [Streptomyces avermitilis MA-4680] Length=222 Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 101/220 (46%), Positives = 146/220 (67%), Gaps = 1/220 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MN L ++ +++W G G+ R EH++Y+ +A+ +A I +PVGLL GHTGRG Sbjct 1 MNVLHFINAFFSDSAHWHGYDGIPRRLLEHIQYSLMALGIAAAIGLPVGLLTGHTGRGGN 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 + RALP+ G+L+L +L GLGL P ++ L++L +P +L +TY + SVDP V Sbjct 61 ALAFLATAARALPSFGLLVLMFVLLGLGLLPVMIPLVVLAVPPILVTTYEAMRSVDPSPV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAAR +GM E+++L +VEVP ALPL+L GLRSA +Q+V+TAT+AAY SLGGLG Y++DG+ Sbjct 121 DAARGLGMHEAKILFQVEVPVALPLILSGLRSAAIQIVSTATIAAYVSLGGLGRYIVDGL 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSV-PGTGR 219 +R + + GA +VA +AL GL V+V PG R Sbjct 181 YQRNYEKVVGGATLVAVMALVTLGLFWTVNRVAVSPGVRR 220 >gi|119960669|ref|YP_948525.1| ABC-type proline/glycine betaine transport systems, permease component [Arthrobacter aurescens TC1] gi|119947528|gb|ABM06439.1| ABC-type proline/glycine betaine transport systems, permease component [Arthrobacter aurescens TC1] Length=247 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 110/207 (54%), Positives = 146/207 (71%), Gaps = 0/207 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MN + +++L NW G G+ R EHL+Y+ + + +A IAVP+GL IGHTGRG + Sbjct 1 MNIFAETIAWLTNPKNWAGSGGIPTRLLEHLQYSGLVLLIAAAIAVPIGLYIGHTGRGRV 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 + V LRALPTLG+L+L LL G GL PP+ AL++L +P LLA TYAGI+SVD VV Sbjct 61 VAVAVAGALRALPTLGLLVLFALLAGSGLMPPVWALVILTVPPLLAGTYAGISSVDATVV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAARAMGMTE Q+L RVE+PN L +M GG+R+A LQV+AT +V AY LGGLG YL DG+ Sbjct 121 DAARAMGMTELQILFRVELPNGLQVMFGGIRTAVLQVIATVSVVAYLPLGGLGRYLFDGL 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLA 207 + F L G++++A LA+ +D +LA Sbjct 181 VLQDFPRMLGGSLLIAGLAIAVDLVLA 207 >gi|239986000|ref|ZP_04706664.1| ABC transporter permease [Streptomyces roseosporus NRRL 11379] gi|291442941|ref|ZP_06582331.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998] gi|291345888|gb|EFE72792.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998] Length=223 Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 89/175 (51%), Positives = 124/175 (71%), Gaps = 0/175 (0%) Query 9 SYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLLVVGAVNG 68 S+L++ WTG G+ R EHL+Y+ +A +A IA+P+GLLIGHTGRG + + + Sbjct 10 SWLVSGEQWTGSDGIDHRLAEHLQYSLLATLVAAAIALPIGLLIGHTGRGAFVAINLSSF 69 Query 69 LRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVDAARAMGM 128 RALPT+G+++L L GL + P +AL+ L +PS++ +TYAG+ +VDP V DAAR GM Sbjct 70 GRALPTVGLVVLVFLASGLSMWPVYIALVALAVPSIVTNTYAGMTAVDPEVRDAARGQGM 129 Query 129 TESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGIKER 183 QVL +VE+P ALPL++ GLR A +QVVATAT+AAY S GGLG Y+ DG+ +R Sbjct 130 RWYQVLFQVELPLALPLIMTGLRLALIQVVATATIAAYVSFGGLGRYVFDGLAQR 184 >gi|111019582|ref|YP_702554.1| amino acid ABC transporter permease [Rhodococcus jostii RHA1] gi|110819112|gb|ABG94396.1| ABC amino acid transporter, permease component [Rhodococcus jostii RHA1] Length=251 Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 109/203 (54%), Positives = 140/203 (69%), Gaps = 7/203 (3%) Query 8 LSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLLVVGAVN 67 + +LL ++WTGP G+ +HL YT +A+ A+ALIAVP+GL IGHTGRG ++V G N Sbjct 2 IDFLLDGAHWTGPEGIPALLLQHLMYTFLALFAAALIAVPLGLYIGHTGRGAVVVAGLAN 61 Query 68 GLRALPTLGVLLLGVLL----FGLGLG---PPLVALMLLGIPSLLASTYAGIASVDPLVV 120 LRALPT+G+L+L VL+ F L P L+ L+LL IP +L +TYAGI SVDP V Sbjct 62 SLRALPTIGLLILLVLVIAPSFSTKLAYLIPSLIVLVLLAIPPILTNTYAGIRSVDPAAV 121 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAAR MG ++L VE+P ALPLML G+RSA LQ+V+TATVAAY SLGGLG LIDG Sbjct 122 DAARGMGFRSMRILTEVEMPCALPLMLSGVRSAVLQIVSTATVAAYISLGGLGRLLIDGK 181 Query 181 KERRFHIALVGAMMVAALALTLD 203 + + GA++V+ LAL D Sbjct 182 AQSDYAQMAAGAVLVSLLALAFD 204 >gi|317123455|ref|YP_004097567.1| binding-protein-dependent transporters inner membrane component [Intrasporangium calvum DSM 43043] gi|315587543|gb|ADU46840.1| binding-protein-dependent transport systems inner membrane component [Intrasporangium calvum DSM 43043] Length=261 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 106/213 (50%), Positives = 143/213 (68%), Gaps = 8/213 (3%) Query 3 FLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLLV 62 + +++L ++W+GP G+ R EH+ YTAV V + ++AVP+G +GHTGRG LV Sbjct 1 MIDDLVTWLQDPAHWSGPDGVPARLSEHVVYTAVTVLVAVVLAVPLGAWVGHTGRGRWLV 60 Query 63 VGAVNGLRALPTLGVLLLGVLLFGLGLG-------PPLVALMLLGIPSLLASTYAGIASV 115 GA N LRA+P+LG+L +L G + P ++ L++L IP LL+ +YAG+ SV Sbjct 61 TGA-NALRAVPSLGLLFAISMLVGPLIQSSLAFTLPSIIVLVILAIPPLLSGSYAGVESV 119 Query 116 DPLVVDAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGY 175 DP DAAR MGM QVL +VE+P A+PL+L GLRSATLQV+ATAT+AA SLGGLG Y Sbjct 120 DPAARDAARGMGMRGPQVLAQVELPIAMPLLLSGLRSATLQVIATATIAASISLGGLGRY 179 Query 176 LIDGIKERRFHIALVGAMMVAALALTLDGLLAL 208 LIDG+ R + G+++VA LAL DG LAL Sbjct 180 LIDGLAARDLSQMVAGSVLVALLALFTDGALAL 212 >gi|257070098|ref|YP_003156353.1| ABC-type proline/glycine betaine transporter permease [Brachybacterium faecium DSM 4810] gi|256560916|gb|ACU86763.1| ABC-type proline/glycine betaine transport system, permease component [Brachybacterium faecium DSM 4810] Length=223 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 97/191 (51%), Positives = 127/191 (67%), Gaps = 0/191 (0%) Query 2 NFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLL 61 N +L +L W+GP G+ +RT EHL YTA+ V +AL+AVP+GL +GHTGR L Sbjct 4 NPFLDSLDWLGDPLRWSGPDGIPLRTLEHLGYTALGVLVAALLAVPIGLYVGHTGRFKGL 63 Query 62 VVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVD 121 V A RALPTLG++ L LL G+GL PL + ++L IPSLLA Y+ I S DP VD Sbjct 64 AVAAAGAARALPTLGLVTLFALLLGIGLTAPLASFVILAIPSLLAGAYSAIESADPATVD 123 Query 122 AARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGIK 181 AARA GMTE Q+L RVE+P +PL++GG R AT+QVVATA +AAY GGLG Y+ G+ Sbjct 124 AARAQGMTELQILTRVEIPLGMPLLIGGFRGATVQVVATAMLAAYVGNGGLGRYIFQGLG 183 Query 182 ERRFHIALVGA 192 + + + G+ Sbjct 184 SQNYPQMIAGS 194 >gi|226361730|ref|YP_002779508.1| ABC transporter permease protein [Rhodococcus opacus B4] gi|226240215|dbj|BAH50563.1| putative ABC transporter permease protein [Rhodococcus opacus B4] Length=249 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 108/203 (54%), Positives = 141/203 (70%), Gaps = 7/203 (3%) Query 8 LSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLLVVGAVN 67 + +LL ++WTGP G+ +HL YT +A+ A+AL+AVP+GL IGHTGRG+++V G N Sbjct 2 IDFLLDGAHWTGPEGIPALLLQHLIYTFLALFAAALVAVPLGLYIGHTGRGSVVVAGLAN 61 Query 68 GLRALPTLGVLLLGVLL----FGLGLG---PPLVALMLLGIPSLLASTYAGIASVDPLVV 120 LRALPT+G+L+L VL+ F L P L+ L+LL IP +L +TYAGI SVDP V Sbjct 62 SLRALPTIGLLILLVLVIAPSFSSKLAYLIPSLIVLVLLAIPPILTNTYAGIRSVDPAAV 121 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAAR MG ++L VE+P ALPLML G+RSA LQ+V+TATVAAY SLGGLG LIDG Sbjct 122 DAARGMGFRSMRILTEVELPCALPLMLSGVRSAVLQIVSTATVAAYISLGGLGRLLIDGK 181 Query 181 KERRFHIALVGAMMVAALALTLD 203 + + GA++V+ LAL D Sbjct 182 AQSDYAQMAAGAVLVSLLALAFD 204 >gi|282853469|ref|ZP_06262806.1| ABC transporter, permease protein [Propionibacterium acnes J139] gi|282582922|gb|EFB88302.1| ABC transporter, permease protein [Propionibacterium acnes J139] gi|314922212|gb|EFS86043.1| ABC transporter, permease protein [Propionibacterium acnes HL001PA1] 6 more sequence titles Length=231 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 103/212 (49%), Positives = 142/212 (67%), Gaps = 4/212 (1%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MN + AL++L T+S+W G + VR EHL YT +A+ +A+IA+P GL IGHTGRG Sbjct 1 MNHIAAALTWLTTSSHWAGSGSIGVRIGEHLWYTLLALTVAAIIAIPAGLAIGHTGRGKT 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLV----ALMLLGIPSLLASTYAGIASVD 116 + V LRALP+LG+L L + +G+ P+V L +L IP LLA +Y+GI ++D Sbjct 61 IAVACSGALRALPSLGLLTLLAISTTIGIENPVVPSTIVLAILAIPPLLAGSYSGIDAID 120 Query 117 PLVVDAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYL 176 V D ARA GMTE QVL RVE+P A PL+LGGLRSA LQV+AT T+ +Y +GGLG ++ Sbjct 121 DEVADGARACGMTEMQVLGRVELPLATPLLLGGLRSAALQVIATTTICSYLGMGGLGRFI 180 Query 177 IDGIKERRFHIALVGAMMVAALALTLDGLLAL 208 +DG+ + L G++++ LAL +DGLL L Sbjct 181 LDGLAVSDYPQMLAGSIVIIVLALVVDGLLCL 212 >gi|297203146|ref|ZP_06920543.1| ABC transporter permease [Streptomyces sviceus ATCC 29083] gi|197717472|gb|EDY61506.1| ABC transporter permease [Streptomyces sviceus ATCC 29083] Length=222 Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 98/201 (49%), Positives = 137/201 (69%), Gaps = 2/201 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRG-T 59 MN L ++ +++W G G+ R EH++YT A+A +A I +PVGL+ GH GRG Sbjct 1 MNILNFINAFFSDSAHWQGYDGIPTRLGEHVQYTLEALAIAAAIGLPVGLVTGHVGRGGN 60 Query 60 LLVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLV 119 L AV G RA+PT G+L+L L G GL ++ L++L +P +L ++Y + SVDP Sbjct 61 ALAFIAVAG-RAVPTFGLLVLMTLSLGFGLINVMIPLVVLAVPPILVTSYEAMRSVDPAP 119 Query 120 VDAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDG 179 VDAAR MGM E +VL RVE+P ALPL+LGGLRSA +Q+V+TAT+AAY SLGGLG Y++DG Sbjct 120 VDAARGMGMHEVEVLFRVELPVALPLILGGLRSAAIQIVSTATIAAYVSLGGLGRYIVDG 179 Query 180 IKERRFHIALVGAMMVAALAL 200 + +R + + GA +VA +AL Sbjct 180 LYQRNYEKVVGGATLVALMAL 200 >gi|50954890|ref|YP_062178.1| ABC-type glycine betaine transport, permease protein [Leifsonia xyli subsp. xyli str. CTCB07] gi|31616619|gb|AAP55492.1| PROZ-like protein [Leifsonia xyli subsp. xyli] gi|50951372|gb|AAT89073.1| ABC-type glycine betaine transport, permease protein [Leifsonia xyli subsp. xyli str. CTCB07] Length=247 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 101/216 (47%), Positives = 140/216 (65%), Gaps = 1/216 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 M A +L +N GP G+ R EH+ Y+ + + S IA+P+G LIGHTGR Sbjct 1 MTDFIAAFGWLFDPANTAGPRGIPTRAGEHILYSLLTLLLSGAIALPIGFLIGHTGRLRG 60 Query 61 LVVGAVNGLRALPTLG-VLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLV 119 + VG LRALPTLG V+ L +L + + PPL+AL +L IP LLA Y+G+ +VD Sbjct 61 VAVGFSGALRALPTLGLVVYLALLTANISIVPPLIALTVLAIPPLLAGAYSGLQAVDRRT 120 Query 120 VDAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDG 179 +DAARA+GMTE Q+ +VE+P +LPL+LGG+R+ LQV+AT TVAA +GGLG +L DG Sbjct 121 IDAARAVGMTEWQIFSKVELPLSLPLVLGGIRAGALQVIATWTVAAILPVGGLGRFLFDG 180 Query 180 IKERRFHIALVGAMMVAALALTLDGLLALAGWVSVP 215 + + + L G+++V ALAL +DGL AL + VP Sbjct 181 LAVQNYPEMLGGSIIVVALALVVDGLFALTQRIVVP 216 >gi|344997743|ref|YP_004800597.1| binding-protein-dependent transport systems inner membrane component [Streptomyces sp. SirexAA-E] gi|344313369|gb|AEN08057.1| binding-protein-dependent transport systems inner membrane component [Streptomyces sp. SirexAA-E] Length=223 Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 88/175 (51%), Positives = 124/175 (71%), Gaps = 0/175 (0%) Query 9 SYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTLLVVGAVNG 68 ++L+++ W G G+ R EHL+Y+ +A +A IA+PVGLLIGHT RG + + + Sbjct 10 AWLVSSEQWAGSDGIGHRLTEHLQYSLLATLVAAAIALPVGLLIGHTRRGAFIAINLSSF 69 Query 69 LRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVVDAARAMGM 128 RALPT+G+++L L GL + P +AL+ L +PS++ +TYAG+ +VDP V DAAR GM Sbjct 70 GRALPTVGLVVLVFLASGLSMWPVYIALVALAVPSIVTNTYAGMTAVDPEVRDAARGQGM 129 Query 129 TESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGIKER 183 QVLL+VE+P ALPL++ GLR A +QVVATAT+AAY S GGLG Y+ DG+ +R Sbjct 130 RWHQVLLQVELPLALPLIMTGLRLALIQVVATATIAAYVSFGGLGRYVFDGLAQR 184 >gi|311112853|ref|YP_003984075.1| glycine betaine/choline ABC transporter membrane protein [Rothia dentocariosa ATCC 17931] gi|310944347|gb|ADP40641.1| glycine betaine/choline ABC superfamily ATP binding cassette transporter, membrane protein [Rothia dentocariosa ATCC 17931] Length=248 Score = 168 bits (425), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 103/215 (48%), Positives = 136/215 (64%), Gaps = 0/215 (0%) Query 1 MNFLQQALSYLLTASNWTGPVGLAVRTCEHLEYTAVAVAASALIAVPVGLLIGHTGRGTL 60 MN +++ ++L NW G G+ RT EHL T AVA + +IAVP+GL GHT RG Sbjct 1 MNVIERTFAFLGDGVNWQGSQGILARTVEHLGITMFAVAIALVIAVPLGLWAGHTRRGGH 60 Query 61 LVVGAVNGLRALPTLGVLLLGVLLFGLGLGPPLVALMLLGIPSLLASTYAGIASVDPLVV 120 ++G LRALP LG+L L L FG+ PPL L+++ + LLA T + +DP VV Sbjct 61 ALLGFTAALRALPALGLLTLLALWFGVNAIPPLAVLVIIAVAPLLAHTLEAVTGIDPDVV 120 Query 121 DAARAMGMTESQVLLRVEVPNALPLMLGGLRSATLQVVATATVAAYASLGGLGGYLIDGI 180 DAARA GMTE Q+L RVE+P LP+ +GGLRSA LQV+ATAT+AAY + LG YL DG+ Sbjct 121 DAARAQGMTEGQILCRVEIPLGLPVFMGGLRSAVLQVIATATIAAYINGNNLGRYLFDGL 180 Query 181 KERRFHIALVGAMMVAALALTLDGLLALAGWVSVP 215 R + LV ++VA LA +D ++ALA P Sbjct 181 AVRDYPRMLVATLLVAVLAFVVDAIMALAQRAVTP 215 Lambda K H 0.323 0.139 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 329042631632 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40