BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3757c

Length=229
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15610893|ref|NP_218274.1|  osmoprotectant (glycine betaine/car...   438    3e-121
gi|296166875|ref|ZP_06849292.1|  glycine betaine/L-proline ABC su...   352    2e-95 
gi|342860002|ref|ZP_08716654.1|  ABC transporter permease [Mycoba...   339    2e-91 
gi|183985268|ref|YP_001853559.1|  osmoprotectant (glycine betaine...   338    3e-91 
gi|118619515|ref|YP_907847.1|  osmoprotectant (glycine betaine/ca...   336    1e-90 
gi|240168516|ref|ZP_04747175.1|  osmoprotectant (glycine betaine/...   326    1e-87 
gi|118464857|ref|YP_879607.1|  ABC transporter permease [Mycobact...   324    7e-87 
gi|41406372|ref|NP_959208.1|  ProW [Mycobacterium avium subsp. pa...   323    1e-86 
gi|254773329|ref|ZP_05214845.1|  ABC transporter, permease protei...   321    7e-86 
gi|254822450|ref|ZP_05227451.1|  ABC transporter, permease protei...   319    2e-85 
gi|108801928|ref|YP_642125.1|  binding-protein-dependent transpor...   305    4e-81 
gi|145221801|ref|YP_001132479.1|  binding-protein-dependent trans...   298    4e-79 
gi|315446462|ref|YP_004079341.1|  ABC-type proline/glycine betain...   298    5e-79 
gi|118472530|ref|YP_890549.1|  amino acid ABC transporter permeas...   289    3e-76 
gi|120406541|ref|YP_956370.1|  binding-protein-dependent transpor...   284    9e-75 
gi|169627368|ref|YP_001701017.1|  osmoprotectant ABC transporter ...   279    2e-73 
gi|220913301|ref|YP_002488610.1|  binding-protein-dependent trans...   199    2e-49 
gi|111022965|ref|YP_705937.1|  amino acid ABC transporter permeas...   191    9e-47 
gi|296394995|ref|YP_003659879.1|  binding-protein-dependent trans...   190    1e-46 
gi|226365471|ref|YP_002783254.1|  ABC transporter permease protei...   190    1e-46 
gi|119962177|ref|YP_948526.1|  ABC-type proline/glycine betaine t...   187    7e-46 
gi|317508896|ref|ZP_07966533.1|  inner membrane transporter [Segn...   187    9e-46 
gi|325964042|ref|YP_004241948.1|  ABC-type proline/glycine betain...   186    3e-45 
gi|331698883|ref|YP_004335122.1|  ABC transporter integral membra...   184    8e-45 
gi|312138891|ref|YP_004006227.1|  glycine/betaine ABC transporter...   183    1e-44 
gi|256826382|ref|YP_003150342.1|  proline/glycine betaine ABC tra...   176    2e-42 
gi|116671387|ref|YP_832320.1|  binding-protein-dependent transpor...   171    6e-41 
gi|326332750|ref|ZP_08199011.1|  proline/glycine betaine ABC tran...   171    7e-41 
gi|324998120|ref|ZP_08119232.1|  binding-protein-dependent transp...   169    2e-40 
gi|226307617|ref|YP_002767577.1|  ABC transporter permease protei...   169    3e-40 
gi|229493734|ref|ZP_04387516.1|  ABC amino acid transporter, perm...   167    2e-39 
gi|84495391|ref|ZP_00994510.1|  ABC-type glycine betaine transpor...   166    2e-39 
gi|302529979|ref|ZP_07282321.1|  amino acid ABC transporter [Stre...   164    7e-39 
gi|229488645|ref|ZP_04382511.1|  ABC quaternary amine transporter...   163    2e-38 
gi|184199680|ref|YP_001853887.1|  putative ABC transporter permea...   162    5e-38 
gi|300781609|ref|ZP_07091463.1|  ABC superfamily ATP binding cass...   160    9e-38 
gi|317123454|ref|YP_004097566.1|  binding-protein-dependent trans...   160    1e-37 
gi|311743300|ref|ZP_07717107.1|  glycine betaine/L-proline ABC su...   157    9e-37 
gi|295129961|ref|YP_003580624.1|  ABC transporter, permease prote...   157    1e-36 
gi|256380260|ref|YP_003103920.1|  ABC transporter inner membrane ...   157    1e-36 
gi|327334987|gb|EGE76698.1|  proline/glycine betaine ABC transpor...   156    2e-36 
gi|226361729|ref|YP_002779507.1|  ABC transporter permease protei...   156    2e-36 
gi|340774236|gb|EGR96723.1|  ABC transporter, permease protein [P...   156    2e-36 
gi|111019581|ref|YP_702553.1|  ABC quaternary amine transporter p...   156    3e-36 
gi|326329327|ref|ZP_08195652.1|  proline/glycine betaine ABC tran...   155    3e-36 
gi|282853470|ref|ZP_06262807.1|  ABC transporter, permease protei...   155    3e-36 
gi|313793025|gb|EFS41092.1|  ABC transporter, permease protein [P...   155    4e-36 
gi|289424233|ref|ZP_06426016.1|  ABC transporter, permease protei...   155    4e-36 
gi|258651639|ref|YP_003200795.1|  binding-protein-dependent trans...   154    8e-36 
gi|50841888|ref|YP_055115.1|  ABC transporter-associated permease...   154    1e-35 


>gi|15610893|ref|NP_218274.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) 
transport integral membrane protein ABC transporter PROW [Mycobacterium 
tuberculosis H37Rv]
 gi|15843377|ref|NP_338414.1| amino acid ABC transporter, permease protein [Mycobacterium tuberculosis 
CDC1551]
 gi|31794927|ref|NP_857420.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) 
transport integral membrane protein ABC transporter PROW [Mycobacterium 
bovis AF2122/97]
 80 more sequence titles
 Length=229

 Score =  438 bits (1127),  Expect = 3e-121, Method: Compositional matrix adjust.
 Identities = 229/229 (100%), Positives = 229/229 (100%), Gaps = 0/229 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI
Sbjct  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS
Sbjct  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
            RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV
Sbjct  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR  229
            AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR
Sbjct  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR  229


>gi|296166875|ref|ZP_06849292.1| glycine betaine/L-proline ABC superfamily ATP binding cassette 
transporter, permease protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295897752|gb|EFG77341.1| glycine betaine/L-proline ABC superfamily ATP binding cassette 
transporter, permease protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=228

 Score =  352 bits (904),  Expect = 2e-95, Method: Compositional matrix adjust.
 Identities = 186/229 (82%), Positives = 203/229 (89%), Gaps = 1/229 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            MHYL+TH   AWALTVVHLRLSL+PVL+GL  AVPLG  V+RAP+ RRLTTATASV+FTI
Sbjct  1    MHYLLTHLDDAWALTVVHLRLSLVPVLVGLALAVPLGAAVRRAPVARRLTTATASVVFTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFVVLP+IIGTRILDEANV+VAL AYT ALLVRAVLEALDAVPAQV DAATA+GY 
Sbjct  61   PSLALFVVLPMIIGTRILDEANVMVALTAYTAALLVRAVLEALDAVPAQVRDAATAVGYP  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
             +A+MLKVELPLSIPVLVAGLRVV VTNIAMVSVGSVIGIGGLGTWFT GYQTNKSDQI+
Sbjct  121  PVARMLKVELPLSIPVLVAGLRVVVVTNIAMVSVGSVIGIGGLGTWFTEGYQTNKSDQIL  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR  229
            AG+VA+F+LAIV+D +I  AGRL TPWERA R   RRR V API GGAR
Sbjct  181  AGIVALFVLAIVIDALIVAAGRLVTPWERAARTP-RRRSVMAPIVGGAR  228


>gi|342860002|ref|ZP_08716654.1| ABC transporter permease [Mycobacterium colombiense CECT 3035]
 gi|342132380|gb|EGT85609.1| ABC transporter permease [Mycobacterium colombiense CECT 3035]
Length=228

 Score =  339 bits (870),  Expect = 2e-91, Method: Compositional matrix adjust.
 Identities = 177/229 (78%), Positives = 200/229 (88%), Gaps = 1/229 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            MHYL+TH   AW LTVVHLRL+L+PVLIGL  A+PLG+LVQR  L RR+TTA A V+FTI
Sbjct  1    MHYLLTHLDDAWGLTVVHLRLALVPVLIGLAIALPLGMLVQRTRLARRVTTAAAGVVFTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFVVLP++IGTRILDEANV+VAL AYT ALLVRAVLEALDAVP QV DAATA+GY 
Sbjct  61   PSLALFVVLPMLIGTRILDEANVMVALTAYTAALLVRAVLEALDAVPGQVRDAATAVGYP  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
             I +MLKVELPLS+PVLVAGLRVV VTNIAMVSVGSVIGIGGLG+WFT GYQTNKSDQI+
Sbjct  121  PITRMLKVELPLSVPVLVAGLRVVVVTNIAMVSVGSVIGIGGLGSWFTQGYQTNKSDQIL  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR  229
            AG++A+FLLA+V+DV+I LAGRLATPW  A R+A  RR V AP+ GGAR
Sbjct  181  AGIIALFLLAVVIDVLIVLAGRLATPWAHATRSA-GRRSVVAPVVGGAR  228


>gi|183985268|ref|YP_001853559.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) 
transport integral membrane protein ABC transporter ProW [Mycobacterium 
marinum M]
 gi|183178594|gb|ACC43704.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) 
transport integral membrane protein ABC transporter ProW [Mycobacterium 
marinum M]
Length=226

 Score =  338 bits (868),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 182/229 (80%), Positives = 204/229 (90%), Gaps = 3/229 (1%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            MHYLMTH G AWALT+VHLRLSL+PVLIG   A+PLGL VQ AP LRRLTTATASV+FTI
Sbjct  1    MHYLMTHLGTAWALTMVHLRLSLIPVLIGTAIAIPLGLFVQHAPTLRRLTTATASVVFTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFVVLPLII TRIL EANVI+AL+AYTTALLVRAVLEALDAVPAQV DAA A+GYS
Sbjct  61   PSLALFVVLPLIIKTRILQEANVIIALSAYTTALLVRAVLEALDAVPAQVRDAAVAVGYS  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
             IA+MLKVELPLSIPVLV+GLRVV VTNIAMVSVG+VIGIGGLGTWFTAGY  +KSDQIV
Sbjct  121  PIARMLKVELPLSIPVLVSGLRVVVVTNIAMVSVGAVIGIGGLGTWFTAGYLMDKSDQIV  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR  229
            AG+  MF+LAI++D+V+N+AGRLATPWE   R++R RR+  +PI GGAR
Sbjct  181  AGITVMFVLAILIDMVLNVAGRLATPWE---RSSRGRRRFRSPIVGGAR  226


>gi|118619515|ref|YP_907847.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) 
transport integral membrane protein ABC transporter ProW [Mycobacterium 
ulcerans Agy99]
 gi|118571625|gb|ABL06376.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) 
transport integral membrane protein ABC transporter ProW [Mycobacterium 
ulcerans Agy99]
Length=226

 Score =  336 bits (862),  Expect = 1e-90, Method: Compositional matrix adjust.
 Identities = 181/229 (80%), Positives = 203/229 (89%), Gaps = 3/229 (1%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            MHYLMTH G AWALT+VHLRLSL+PVLIG   A+PLGL VQ AP LRRLTTATASV+FTI
Sbjct  1    MHYLMTHLGTAWALTMVHLRLSLIPVLIGTAIAIPLGLFVQHAPTLRRLTTATASVVFTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFVVLPLII  RIL EANVI+AL+AYTTALLVRAVLEALDAVPAQV DAA A+GYS
Sbjct  61   PSLALFVVLPLIIKMRILQEANVIIALSAYTTALLVRAVLEALDAVPAQVRDAAVAVGYS  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
             IA+MLKVELPLSIPVLV+GLRVV VTNIAMVSVG+VIGIGGLGTWFTAGY  +KSDQIV
Sbjct  121  PIARMLKVELPLSIPVLVSGLRVVVVTNIAMVSVGAVIGIGGLGTWFTAGYLMDKSDQIV  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR  229
            AG+  MF+LAI++D+V+N+AGRLATPWE   R++R RR+  +PI GGAR
Sbjct  181  AGITVMFVLAILIDMVLNVAGRLATPWE---RSSRGRRRFRSPIVGGAR  226


>gi|240168516|ref|ZP_04747175.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline) 
transport integral membrane protein ABC transporter ProW [Mycobacterium 
kansasii ATCC 12478]
Length=226

 Score =  326 bits (836),  Expect = 1e-87, Method: Compositional matrix adjust.
 Identities = 168/208 (81%), Positives = 187/208 (90%), Gaps = 0/208 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M YL+TH   AW LTV+HLRLSL+PVLIG+  AVPLGL VQ AP+LRRLTTA AS++FTI
Sbjct  1    MRYLLTHLDTAWVLTVIHLRLSLIPVLIGMAIAVPLGLAVQHAPVLRRLTTAAASIVFTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFV LPLII TRILDEANVIVAL AYTTALLVR VLEALDAVPA V DAA A+GYS
Sbjct  61   PSLALFVALPLIIKTRILDEANVIVALTAYTTALLVRTVLEALDAVPAPVRDAAVAVGYS  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
             I +M+KVELPLSIPVLVAGLRVV VTNIAMVSVGSVIGIGGLGTWFTAGYQT+KSDQIV
Sbjct  121  PIRRMIKVELPLSIPVLVAGLRVVVVTNIAMVSVGSVIGIGGLGTWFTAGYQTDKSDQIV  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWE  208
            AG++AMF LA+V+D++++LAGRLATPWE
Sbjct  181  AGIIAMFALAVVIDMLLSLAGRLATPWE  208


>gi|118464857|ref|YP_879607.1| ABC transporter permease [Mycobacterium avium 104]
 gi|118166144|gb|ABK67041.1| ABC transporter, permease protein [Mycobacterium avium 104]
Length=228

 Score =  324 bits (830),  Expect = 7e-87, Method: Compositional matrix adjust.
 Identities = 170/229 (75%), Positives = 193/229 (85%), Gaps = 1/229 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            MHYL+TH   A  LTVVHLRLSL+PVLIGL  A+PLG+LVQR    RRLTTA ASV+FTI
Sbjct  1    MHYLLTHLDDAARLTVVHLRLSLVPVLIGLAIALPLGMLVQRRRFARRLTTAVASVVFTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFVVLP+IIGTRILDEANV+VAL AYT ALLVRAVLEALDAVPAQ+ DAATA+GY 
Sbjct  61   PSLALFVVLPMIIGTRILDEANVMVALTAYTAALLVRAVLEALDAVPAQISDAATAVGYP  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
            R+ +M+KVELPL++PVL+AGLRVV VTNIAMVSVGSVIGIGGLG+WFT GYQT KSDQI+
Sbjct  121  RLTRMMKVELPLAVPVLIAGLRVVVVTNIAMVSVGSVIGIGGLGSWFTQGYQTGKSDQIL  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR  229
            AG++A+F LA+ VD +I L GRL TPW  A R    RR V AP+ GGAR
Sbjct  181  AGIIALFALAVAVDGLIVLGGRLVTPWAHAVRGG-ARRSVVAPVVGGAR  228


>gi|41406372|ref|NP_959208.1| ProW [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41394720|gb|AAS02591.1| ProW [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|336459996|gb|EGO38906.1| ABC-type proline/glycine betaine transport system, permease component 
[Mycobacterium avium subsp. paratuberculosis S397]
Length=228

 Score =  323 bits (828),  Expect = 1e-86, Method: Compositional matrix adjust.
 Identities = 169/229 (74%), Positives = 194/229 (85%), Gaps = 1/229 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            MHYL+TH   A  LTVVHLRL+L+PVLIGL  A+PLG+LVQR    RRLTTA ASV+FTI
Sbjct  1    MHYLLTHLDDAARLTVVHLRLALVPVLIGLAIALPLGMLVQRRRFARRLTTAVASVVFTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFVVLP+IIGTRILDEANV+VAL AYT ALLVRAVLEALDAVPAQ+ DAATA+GY 
Sbjct  61   PSLALFVVLPMIIGTRILDEANVMVALTAYTAALLVRAVLEALDAVPAQISDAATAVGYP  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
            R+++M+KVELPL++PVL+AGLRVV VTNIAMVSVGSVIGIGGLG+WFT GYQT KSDQI+
Sbjct  121  RLSRMMKVELPLAVPVLIAGLRVVVVTNIAMVSVGSVIGIGGLGSWFTQGYQTGKSDQIL  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR  229
            AG++A+F LA+ VD +I L GRL TPW  A R    RR V AP+ GGAR
Sbjct  181  AGIIALFALAVAVDGLIVLGGRLVTPWAHAVRGG-ARRSVVAPVVGGAR  228


>gi|254773329|ref|ZP_05214845.1| ABC transporter, permease protein [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=228

 Score =  321 bits (822),  Expect = 7e-86, Method: Compositional matrix adjust.
 Identities = 169/229 (74%), Positives = 192/229 (84%), Gaps = 1/229 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            MHYL+TH   A  LTVVHLRLSL+PVLIGL  A+PLG+LVQR    RRLTTA ASV+FTI
Sbjct  1    MHYLLTHLDDAARLTVVHLRLSLVPVLIGLAIALPLGMLVQRRRFARRLTTAVASVVFTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFVVLP+IIGTRILDEANV+VAL AYT ALLVRAVLEALDAVPAQ+ DAATA+GY 
Sbjct  61   PSLALFVVLPMIIGTRILDEANVMVALTAYTAALLVRAVLEALDAVPAQISDAATAVGYP  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
            R+ +M+KVELPL++PVL+AGLRVV VTNIAMVSVGSVI IGGLG+WFT GYQT KSDQI+
Sbjct  121  RLTRMMKVELPLAVPVLIAGLRVVVVTNIAMVSVGSVIRIGGLGSWFTQGYQTGKSDQIL  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR  229
            AG++A+F LA+ VD +I L GRL TPW  A R    RR V AP+ GGAR
Sbjct  181  AGIIALFALAVAVDGLIVLGGRLVTPWAHAVRGG-ARRSVVAPVVGGAR  228


>gi|254822450|ref|ZP_05227451.1| ABC transporter, permease protein [Mycobacterium intracellulare 
ATCC 13950]
Length=228

 Score =  319 bits (818),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 168/229 (74%), Positives = 194/229 (85%), Gaps = 1/229 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            MHYL+TH   AW LT+VHLRLSL+PV+IGL  A+PLGL VQR  + R LTTA ASV+FTI
Sbjct  1    MHYLLTHLDDAWWLTIVHLRLSLVPVVIGLAIALPLGLAVQRTRIARTLTTAAASVVFTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFVVLP+IIGTRILDEANVIVAL AYT ALLVRAVLEALDAVPAQ  DAA A+GY 
Sbjct  61   PSLALFVVLPMIIGTRILDEANVIVALTAYTAALLVRAVLEALDAVPAQTRDAAVAVGYP  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
             I +++KV+LPL++PVL+AGLRVV VTNIAMVSVGSVIGIGGLG+WFT GYQT+KSDQI+
Sbjct  121  PITRIVKVDLPLAVPVLIAGLRVVVVTNIAMVSVGSVIGIGGLGSWFTQGYQTDKSDQIL  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR  229
            AG++A+F LA+V+DV+I  AGRLATPW  A   A  RR V AP+ GGAR
Sbjct  181  AGIIALFALAVVIDVLIVCAGRLATPWVCAVDTA-GRRSVVAPVVGGAR  228


>gi|108801928|ref|YP_642125.1| binding-protein-dependent transport systems inner membrane component 
[Mycobacterium sp. MCS]
 gi|119871080|ref|YP_941032.1| binding-protein-dependent transport systems inner membrane component 
[Mycobacterium sp. KMS]
 gi|126437909|ref|YP_001073600.1| binding-protein-dependent transport systems inner membrane component 
[Mycobacterium sp. JLS]
 gi|108772347|gb|ABG11069.1| binding-protein-dependent transport systems inner membrane component 
[Mycobacterium sp. MCS]
 gi|119697169|gb|ABL94242.1| binding-protein-dependent transport systems inner membrane component 
[Mycobacterium sp. KMS]
 gi|126237709|gb|ABO01110.1| binding-protein-dependent transport systems inner membrane component 
[Mycobacterium sp. JLS]
Length=222

 Score =  305 bits (781),  Expect = 4e-81, Method: Compositional matrix adjust.
 Identities = 158/222 (72%), Positives = 185/222 (84%), Gaps = 0/222 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M YL+TH    WALTV+HLRLSL+P+++GL+ AVPLG LVQR   LRRLTT TAS+IFTI
Sbjct  1    MRYLLTHLDDLWALTVIHLRLSLIPIVLGLLIAVPLGALVQRTTALRRLTTITASIIFTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFVVLPLII TRILDEANVIVAL  YT ALLVRAV EALDAV   V DAATA+GY 
Sbjct  61   PSLALFVVLPLIIPTRILDEANVIVALTLYTVALLVRAVPEALDAVSPAVLDAATAVGYK  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
             + +MLK+ELPL++PVL+A LRVVAVTNI+MVSVGSVIG+GGLGTWFT GYQ NKSDQIV
Sbjct  121  PLTRMLKIELPLAVPVLIASLRVVAVTNISMVSVGSVIGVGGLGTWFTEGYQANKSDQIV  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAA  222
            AG++A+F+LA+V+D +I L G+  TPW RA R AR++   AA
Sbjct  181  AGIIAIFVLAVVIDTLIMLIGKALTPWARATRPARQKAGAAA  222


>gi|145221801|ref|YP_001132479.1| binding-protein-dependent transport systems inner membrane component 
[Mycobacterium gilvum PYR-GCK]
 gi|145214287|gb|ABP43691.1| binding-protein-dependent transport systems inner membrane component 
[Mycobacterium gilvum PYR-GCK]
Length=224

 Score =  298 bits (763),  Expect = 4e-79, Method: Compositional matrix adjust.
 Identities = 156/219 (72%), Positives = 182/219 (84%), Gaps = 1/219 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M YL TH    W LT++HLRLSL+P+++GL+ AVPLG LVQR   LRRLTT TAS+IFTI
Sbjct  1    MRYLFTHLDDLWVLTLIHLRLSLIPIVLGLLIAVPLGALVQRTTALRRLTTVTASIIFTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFVVLPLII TRILDEANVIVAL  YT ALLVRAV EALDAV   V DAATA+GY 
Sbjct  61   PSLALFVVLPLIIPTRILDEANVIVALTLYTVALLVRAVPEALDAVSPAVLDAATAVGYR  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
             + +MLKVELPL++PVL+A LRVVAVTNI+MV+VGSVIGIGGLGTWFT GYQ NKSDQI+
Sbjct  121  PLTRMLKVELPLALPVLIASLRVVAVTNISMVAVGSVIGIGGLGTWFTEGYQANKSDQII  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERA-PRAARRRR  218
            AG+VA+F+LAIV+D +I   G+L TPW RA PR+ R ++
Sbjct  181  AGIVAIFVLAIVIDTLIMWLGKLLTPWTRAQPRSTRTQK  219


>gi|315446462|ref|YP_004079341.1| ABC-type proline/glycine betaine transporter, permease [Mycobacterium 
sp. Spyr1]
 gi|315264765|gb|ADU01507.1| ABC-type proline/glycine betaine transport system, permease component 
[Mycobacterium sp. Spyr1]
Length=224

 Score =  298 bits (762),  Expect = 5e-79, Method: Compositional matrix adjust.
 Identities = 156/219 (72%), Positives = 181/219 (83%), Gaps = 1/219 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M YL TH    W LT++HLRLSL+P+++GL+ AVPLG LVQR   LRRLTT TAS+IFTI
Sbjct  1    MRYLFTHLDDLWVLTLIHLRLSLIPIVLGLLIAVPLGALVQRTTALRRLTTVTASIIFTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFVVLPLII TRILDEANVIVAL  YT ALLVRAV EALDAV   V DAATA+GY 
Sbjct  61   PSLALFVVLPLIIPTRILDEANVIVALTLYTVALLVRAVPEALDAVSPAVLDAATAVGYR  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
             + +MLKVELPL++PVL+A LRVVAVTNI+MV+VGSVIGIGGLGTWFT GYQ NKSDQI+
Sbjct  121  PLTRMLKVELPLALPVLIASLRVVAVTNISMVAVGSVIGIGGLGTWFTEGYQANKSDQII  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERA-PRAARRRR  218
            AG+VA+F+LAIV+D +I   G+L TPW RA PR  R ++
Sbjct  181  AGIVAIFVLAIVIDTLIMWLGKLLTPWTRAQPRTTRTQK  219


>gi|118472530|ref|YP_890549.1| amino acid ABC transporter permease [Mycobacterium smegmatis 
str. MC2 155]
 gi|118173817|gb|ABK74713.1| amino acid ABC transporter, permease protein [Mycobacterium smegmatis 
str. MC2 155]
Length=214

 Score =  289 bits (739),  Expect = 3e-76, Method: Compositional matrix adjust.
 Identities = 158/210 (76%), Positives = 178/210 (85%), Gaps = 0/210 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M YL+TH    W LTV+HLRLSL+P+++GL+ AVPLG LVQR   LRRLTT  AS+IFTI
Sbjct  1    MQYLLTHLDDLWELTVIHLRLSLVPIVLGLLIAVPLGALVQRTTTLRRLTTVAASIIFTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFV LPLII TRILDEANVIVAL  YTTALLVRAV EALDAVP  V DAATA+GY 
Sbjct  61   PSLALFVALPLIIPTRILDEANVIVALTLYTTALLVRAVPEALDAVPEHVRDAATAVGYR  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
             + +MLKVELPLSIPVLVA LRVVAVTNI+MVSVGSVIGIGGLGTWFT GYQ+NKS QI+
Sbjct  121  PLTRMLKVELPLSIPVLVASLRVVAVTNISMVSVGSVIGIGGLGTWFTEGYQSNKSSQII  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERA  210
            AG++A+F+LAIVVD +I LAG+L  PW RA
Sbjct  181  AGIIAIFVLAIVVDTLIMLAGKLIAPWNRA  210


>gi|120406541|ref|YP_956370.1| binding-protein-dependent transport systems inner membrane component 
[Mycobacterium vanbaalenii PYR-1]
 gi|119959359|gb|ABM16364.1| binding-protein-dependent transport systems inner membrane component 
[Mycobacterium vanbaalenii PYR-1]
Length=226

 Score =  284 bits (726),  Expect = 9e-75, Method: Compositional matrix adjust.
 Identities = 160/225 (72%), Positives = 188/225 (84%), Gaps = 2/225 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M YL+TH  A W L+++HLRLSL+P+L+GL+ AVPLG LVQR  +LRRLTT TAS++FTI
Sbjct  1    MRYLVTHLDALWTLSLIHLRLSLIPILLGLLIAVPLGALVQRTTVLRRLTTVTASIVFTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFVVLPLII TRILDEANVIVAL  YT ALLVRAV EALDAV   V DAATA+GY 
Sbjct  61   PSLALFVVLPLIIPTRILDEANVIVALTLYTVALLVRAVPEALDAVSPAVLDAATAVGYR  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
             + +MLK+ELPL++PVL+A LRVVAVTNI+MV+VGSVIGIGGLGTWFT GYQ NKSDQI+
Sbjct  121  PLTRMLKIELPLALPVLIASLRVVAVTNISMVAVGSVIGIGGLGTWFTEGYQANKSDQII  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERA-PRAARR-RRQVAAP  223
            AG+VA+F+LAIV+D +I LAG+  TPW RA PRA R  R +  AP
Sbjct  181  AGIVAIFVLAIVIDTLIMLAGKALTPWTRAQPRATRAPRAEAGAP  225


>gi|169627368|ref|YP_001701017.1| osmoprotectant ABC transporter ProW [Mycobacterium abscessus 
ATCC 19977]
 gi|169239335|emb|CAM60363.1| Possible osmoprotectant (glycine betaine/ carnitine/choline/l-proline) 
ABC transporter ProW [Mycobacterium abscessus]
Length=217

 Score =  279 bits (714),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 149/214 (70%), Positives = 180/214 (85%), Gaps = 0/214 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M YL TH G AW L+++HLRLSL+P+LIGL  A+P G L+ R   +RR+TT  AS++FTI
Sbjct  1    MRYLFTHLGDAWQLSLIHLRLSLVPILIGLAIAIPCGALLHRRRTVRRVTTVIASIVFTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFV LPLII TRILDEANV+VAL  YTTALL+RAV EALDA+  QV DAATA+GY 
Sbjct  61   PSLALFVALPLIIPTRILDEANVMVALTLYTTALLIRAVPEALDAIAPQVRDAATAVGYR  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
             +A++++VELPLSIPVLVAGLRVVAVTNI+MVSVGSVIGIGGLGTWFT GYQ NKS QI+
Sbjct  121  PLARLVRVELPLSIPVLVAGLRVVAVTNISMVSVGSVIGIGGLGTWFTEGYQANKSSQII  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAA  214
            AG+VA+FLLA++VD ++ + GR+ATPW RA + A
Sbjct  181  AGIVAIFLLAVIVDSLLVVLGRVATPWARATKTA  214


>gi|220913301|ref|YP_002488610.1| binding-protein-dependent transporters inner membrane component 
[Arthrobacter chlorophenolicus A6]
 gi|219860179|gb|ACL40521.1| binding-protein-dependent transport systems inner membrane component 
[Arthrobacter chlorophenolicus A6]
Length=242

 Score =  199 bits (506),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 107/241 (45%), Positives = 164/241 (69%), Gaps = 12/241 (4%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M + +++ G  +     HL L+L+P+++GL+ ++PL  L +R   LR +   ++S+++TI
Sbjct  1    MEWFLSNSGMVFERAGQHLVLALVPMVLGLVLSIPLAQLARRNGALRSVVLTSSSLLYTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALF++LP I+GTR+LD  NVIVAL  Y  ALLVRA L+A D+V  +V  AA A+GY 
Sbjct  61   PSLALFIILPTILGTRVLDPLNVIVALTIYAVALLVRAALDAFDSVDQEVSQAAVAMGYR  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
             +A+ L+V+LPLS+PV+ AGLRVV+V+NI++VSV +++GIG LG  FT+G Q +   +IV
Sbjct  121  PLARFLQVDLPLSLPVMFAGLRVVSVSNISLVSVAALLGIGNLGMLFTSGLQRDFVTEIV  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRR------------RQVAAPITGGA  228
             G+VA+ +LA+++D V+ L  R+ TPW RA + +R+             R++A P  GG 
Sbjct  181  VGIVAILVLALLMDAVLVLLERILTPWVRAGKQSRQDLDANADEPEVAARRLAQPQAGGG  240

Query  229  R  229
             
Sbjct  241  N  241


>gi|111022965|ref|YP_705937.1| amino acid ABC transporter permease [Rhodococcus jostii RHA1]
 gi|110822495|gb|ABG97779.1| ABC amino acid transporter, permease component [Rhodococcus jostii 
RHA1]
Length=232

 Score =  191 bits (484),  Expect = 9e-47, Method: Compositional matrix adjust.
 Identities = 123/231 (54%), Positives = 168/231 (73%), Gaps = 3/231 (1%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M +L+ +      LT  HL L+L+P+LIGL+ AVP+G  ++ A  LR++T   A + FTI
Sbjct  1    MRWLIDNFSVVVDLTKTHLYLALVPLLIGLLIAVPVGTAIRGASWLRKITLIVAGIAFTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFV +P ++G +ILD  NV++AL  Y+TALL+RAV EALD+VPA V D+ATA+G++
Sbjct  61   PSLALFVTIPSVVGLQILDPLNVVIALTIYSTALLIRAVPEALDSVPADVVDSATAMGFT  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
            R+ + L VELPL++PVLVA +RVVAVTNI++VSVGS+IGIGGLGT FT GYQ +  DQI+
Sbjct  121  RLRRALTVELPLALPVLVANVRVVAVTNISLVSVGSLIGIGGLGTLFTQGYQRDYPDQIL  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARR---RRQVAAPITGGA  228
            AG++A+ +LA+  D+++ L GR  TPW R  +  R      Q AAP  G A
Sbjct  181  AGIIAIVVLALAFDLLLFLVGRALTPWTRQQKVRRTPLVAGQSAAPAAGEA  231


>gi|296394995|ref|YP_003659879.1| binding-protein-dependent transporter inner membrane component 
[Segniliparus rotundus DSM 44985]
 gi|296182142|gb|ADG99048.1| binding-protein-dependent transport systems inner membrane component 
[Segniliparus rotundus DSM 44985]
Length=213

 Score =  190 bits (483),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 106/212 (50%), Positives = 145/212 (69%), Gaps = 0/212 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M++L  H   A  +   H  LSLLP++IG+  A+P+G  V RAP  RR + A ++++FTI
Sbjct  1    MNWLAHHWDKARPMAWEHAWLSLLPIVIGVAVALPIGAAVARAPWARRFSDACSNIVFTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALF VLP ++G   L   NV+ AL  YT A+ V+ + EAL AV   V  AA A+G+S
Sbjct  61   PSLALFAVLPGVLGFGFLSPLNVVAALTLYTAAMQVKTIPEALAAVDPDVLAAADAVGWS  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
              A++++V+LPL+ PVL A LRVVA  NI+MV+VGSVIG+GGLG  F +GYQ +  D IV
Sbjct  121  PTARLVRVDLPLAAPVLFANLRVVAAANISMVAVGSVIGVGGLGQLFLSGYQRDYPDMIV  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPR  212
            AG++A+ +LA+ VD V+ + GR  TPW RA R
Sbjct  181  AGIIAVLVLALGVDAVLVVLGRALTPWTRARR  212


>gi|226365471|ref|YP_002783254.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226243961|dbj|BAH54309.1| putative ABC transporter permease protein [Rhodococcus opacus 
B4]
Length=232

 Score =  190 bits (482),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 121/227 (54%), Positives = 166/227 (74%), Gaps = 6/227 (2%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M +L+ +      LT  HL L+L+P+LIGL+ AVP+G  ++ A  LR+LT   A + FTI
Sbjct  1    MRWLIDNFSVVVDLTKTHLYLALVPLLIGLLIAVPVGTAIRGASWLRKLTLIVAGIAFTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFV +P ++G +ILD  NV++AL  Y+TALLVRAV EALD+VPA V D+ATA+G++
Sbjct  61   PSLALFVTIPSVVGLQILDPLNVVIALTIYSTALLVRAVPEALDSVPADVVDSATAMGFT  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
            R+ + L VELPL++PVLVA +RVVAVTNI++VSVGS+IGIGGLGT FT GYQ +  DQI+
Sbjct  121  RLRRALTVELPLALPVLVANVRVVAVTNISLVSVGSLIGIGGLGTLFTQGYQRDYPDQIL  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGG  227
            AG++++ +LA+  D+++ L GR  TPW R  +  R      AP+  G
Sbjct  181  AGIISIVVLALAFDLLLFLVGRALTPWTRQQKVRR------APLVAG  221


>gi|119962177|ref|YP_948526.1| ABC-type proline/glycine betaine transport systems, permease 
component [Arthrobacter aurescens TC1]
 gi|119949036|gb|ABM07947.1| ABC-type proline/glycine betaine transport systems, permease 
component [Arthrobacter aurescens TC1]
Length=246

 Score =  187 bits (476),  Expect = 7e-46, Method: Compositional matrix adjust.
 Identities = 98/225 (44%), Positives = 151/225 (68%), Gaps = 0/225 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M + + + G    L   H+ L+++P+++GL+ +VPL  L +R   LR +     S+++TI
Sbjct  1    MEWFLANSGMVLGLAGQHMVLAIIPMILGLLISVPLAQLARRNSTLRSVVATATSLLYTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALF++LP I+GTRILD  NV+VAL  Y  ALLVRA ++A D+V   + +AA A+G+ 
Sbjct  61   PSLALFIILPTILGTRILDPLNVVVALTIYAVALLVRAAMDAFDSVDDDLRNAAVAMGFK  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
             +A+  +V+LPLS+PVL AGLRVV+V+NI++VSV +++G+G LG  FT G Q     ++V
Sbjct  121  PLARFFQVDLPLSLPVLFAGLRVVSVSNISLVSVAALLGVGNLGVLFTDGLQRTFITEVV  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPIT  225
             G++A+ +LA+++D V+ +  RL TPW RA      R    A +T
Sbjct  181  VGIIAILVLALLMDAVLVVLERLLTPWSRAAGGKPSRPDANALLT  225


>gi|317508896|ref|ZP_07966533.1| inner membrane transporter [Segniliparus rugosus ATCC BAA-974]
 gi|316252780|gb|EFV12213.1| inner membrane transporter [Segniliparus rugosus ATCC BAA-974]
Length=213

 Score =  187 bits (476),  Expect = 9e-46, Method: Compositional matrix adjust.
 Identities = 110/212 (52%), Positives = 152/212 (72%), Gaps = 0/212 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M++L+ H G AW +   H  LSLLP++IG++ A+P+G+ V R P LRR + A +++++TI
Sbjct  1    MNWLVHHWGKAWPMAWEHAWLSLLPLVIGVVVALPVGVAVARRPWLRRTSDALSNIVYTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALF VLP ++G   L   NV+VAL  YT A+ V+A+ EAL AV   V +AA AIG++
Sbjct  61   PSLALFAVLPGVLGFGFLSPLNVVVALTLYTVAMQVKAIPEALAAVDRHVLEAADAIGWA  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
              A++++V+LPL+ PVLVA LRVVA  NI+MV+VGSVIG+GGLG  F +GYQ N  D IV
Sbjct  121  PAARLVRVDLPLAAPVLVANLRVVAAANISMVAVGSVIGVGGLGQLFLSGYQRNYPDVIV  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPR  212
            AG+V + +LA+ VD+ + L GR  TPW R  R
Sbjct  181  AGIVLVLVLALAVDLALVLIGRALTPWARPGR  212


>gi|325964042|ref|YP_004241948.1| ABC-type proline/glycine betaine transporter, permease [Arthrobacter 
phenanthrenivorans Sphe3]
 gi|323470129|gb|ADX73814.1| ABC-type proline/glycine betaine transport system, permease component 
[Arthrobacter phenanthrenivorans Sphe3]
Length=243

 Score =  186 bits (471),  Expect = 3e-45, Method: Compositional matrix adjust.
 Identities = 104/222 (47%), Positives = 152/222 (69%), Gaps = 0/222 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M + + + G        HL L+L+P+++GL  ++PL  L ++   LR +    +S+++TI
Sbjct  1    MEWFLANSGMVLERAGQHLLLALVPMVLGLAISIPLAQLARQNRPLRSVVLTASSLLYTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALF++LP I+GTRILD  NV+VAL  Y  ALLVRA L+A D+V   V  AA A+GY 
Sbjct  61   PSLALFIILPTILGTRILDPLNVVVALTIYAVALLVRAALDAFDSVSGDVSQAAVAMGYK  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
             +A+ L V+LPLS+PVL AGLRVV+V+NI++VSV +++GIG LG  FT+G Q     +IV
Sbjct  121  PLARFLHVDLPLSLPVLFAGLRVVSVSNISLVSVAALLGIGNLGMLFTSGLQRGFITEIV  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAA  222
             G++A+ +LA+++D  + L  RL TPWERA R   R ++ A+
Sbjct  181  VGIIAILILALLMDAFLVLLERLVTPWERAGRRENREQEAAS  222


>gi|331698883|ref|YP_004335122.1| ABC transporter integral membrane subunit [Pseudonocardia dioxanivorans 
CB1190]
 gi|326953572|gb|AEA27269.1| ABC-type transporter, integral membrane subunit [Pseudonocardia 
dioxanivorans CB1190]
Length=220

 Score =  184 bits (467),  Expect = 8e-45, Method: Compositional matrix adjust.
 Identities = 112/216 (52%), Positives = 159/216 (74%), Gaps = 0/216 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M+++  + G    L   H+  SL+PV+IGL+ A+PLG L  RA + R +    A +++TI
Sbjct  1    MNWVSQNLGFIAGLLSDHIVFSLVPVVIGLVLAIPLGWLANRAGVGRTVVVNLAGLLYTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFV LP+++GT ILD  NVIVAL  Y+ ALLVR V +AL+AVP  + DAATA+GY+
Sbjct  61   PSLALFVFLPVVLGTGILDPVNVIVALTVYSLALLVRTVADALEAVPPVLVDAATAMGYA  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
             + + L VELP+S+PV++AG+RV AV++I++V+VGSVIG GGLG  FT G+Q + + ++V
Sbjct  121  PVRRFLAVELPVSVPVILAGVRVAAVSSISLVTVGSVIGFGGLGQMFTDGFQRDITAEVV  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARR  216
            AG+V +  LA+VVD ++ L GRL TPW+RA RA R+
Sbjct  181  AGIVLVVALALVVDGLLLLVGRLLTPWDRAARATRQ  216


>gi|312138891|ref|YP_004006227.1| glycine/betaine ABC transporter integral membrane subunit [Rhodococcus 
equi 103S]
 gi|325676402|ref|ZP_08156080.1| glycine betaine/L-proline ABC superfamily ATP binding cassette 
transporter, permease protein [Rhodococcus equi ATCC 33707]
 gi|311888230|emb|CBH47542.1| putative ABC-type glycine betaine transporter integral membrane 
subunit [Rhodococcus equi 103S]
 gi|325552580|gb|EGD22264.1| glycine betaine/L-proline ABC superfamily ATP binding cassette 
transporter, permease protein [Rhodococcus equi ATCC 33707]
Length=229

 Score =  183 bits (465),  Expect = 1e-44, Method: Compositional matrix adjust.
 Identities = 117/208 (57%), Positives = 156/208 (75%), Gaps = 0/208 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M YL  +      LT  HL L+LLP+L+GL+ A+PLG  V+R   LRR T   AS+ FT+
Sbjct  1    MRYLTENFSYVLELTREHLSLALLPLLLGLVIAIPLGTAVRRVRWLRRTTLVIASIAFTV  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFV +P ++G  ILD ANV++AL  Y+TALLVRAV EALDAVP  V D+ATA+G++
Sbjct  61   PSLALFVTVPTVVGLPILDPANVVIALTVYSTALLVRAVPEALDAVPEDVVDSATAMGFT  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
             + + L VELPL++PVL+A +RVVAVTNI++VSVG++IG+GGLG  FT GYQ +  +QIV
Sbjct  121  PLRRALTVELPLALPVLLANVRVVAVTNISLVSVGALIGVGGLGELFTKGYQRDYPEQIV  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWE  208
            AG+VA+ +LA++ D  + LAGR  TPW+
Sbjct  181  AGIVAIVVLALLFDAALYLAGRFLTPWQ  208


>gi|256826382|ref|YP_003150342.1| proline/glycine betaine ABC transporter permease [Kytococcus 
sedentarius DSM 20547]
 gi|256689775|gb|ACV07577.1| ABC-type proline/glycine betaine transport system, permease component 
[Kytococcus sedentarius DSM 20547]
Length=214

 Score =  176 bits (447),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 99/202 (50%), Positives = 138/202 (69%), Gaps = 0/202 (0%)

Query  12   WALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPL  71
            W L + H+ L+ LP+LIGL  A+PLG +  R P LR    + +++++TIPSLALF++LP 
Sbjct  13   WELGLAHVYLAGLPLLIGLALALPLGWVAARIPRLRTALVSGSALLYTIPSLALFILLPG  72

Query  72   IIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELP  131
            IIGT+ILD  NV++A++ YT ALLVR V + L AVP  V  AATA+G  R  ++ +VELP
Sbjct  73   IIGTQILDPLNVLIAMSLYTVALLVRNVADGLGAVPEHVRQAATAMGLGRWRRLTRVELP  132

Query  132  LSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAI  191
            L++PV+ AGLRV AV+N+++VSV +++GI  LG  FT G+  +    I  G+    LLA+
Sbjct  133  LAVPVIAAGLRVAAVSNVSIVSVAALVGIPQLGILFTRGFNRDDLGMIAVGMAGCVLLAL  192

Query  192  VVDVVINLAGRLATPWERAPRA  213
            + D VI L  RL TPW R  RA
Sbjct  193  LFDAVILLLRRLLTPWLREVRA  214


>gi|116671387|ref|YP_832320.1| binding-protein-dependent transport systems inner membrane component 
[Arthrobacter sp. FB24]
 gi|116611496|gb|ABK04220.1| binding-protein-dependent transport systems inner membrane component 
[Arthrobacter sp. FB24]
Length=236

 Score =  171 bits (434),  Expect = 6e-41, Method: Compositional matrix adjust.
 Identities = 104/237 (44%), Positives = 155/237 (66%), Gaps = 12/237 (5%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M + + + G  + L   HL L+++P+++GL  ++PL    +R   LR +     S+++T+
Sbjct  1    MEWFLANSGRVFELAGQHLVLAIVPMVLGLALSIPLAQFARRNRTLRSVVVTATSLLYTV  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALF++LP I+GTR+LD  NVIVAL  Y  ALLVRA L+A D+V   +  AA A+G+ 
Sbjct  61   PSLALFIILPSILGTRVLDPVNVIVALTIYAVALLVRAALDAFDSVDEDLRQAAVAMGFK  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
              A+ L+++LPLS+PVL AGLRVV+V+NI++VSV +++GIG LG  FT+G Q     ++V
Sbjct  121  PGARFLQIDLPLSLPVLFAGLRVVSVSNISLVSVAALLGIGNLGMLFTSGLQRGFITEVV  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERA---------PRAARRRRQVAAPITGGA  228
             G++A+ +LA+++D ++ L  RL TPW RA         P AA R   V A   GGA
Sbjct  181  VGIIAILVLALLMDALLVLLERLLTPWTRAAGRTDKAALPSAAERLSDVRA---GGA  234


>gi|326332750|ref|ZP_08199011.1| proline/glycine betaine ABC transporter, permease protein [Nocardioidaceae 
bacterium Broad-1]
 gi|325949449|gb|EGD41528.1| proline/glycine betaine ABC transporter, permease protein [Nocardioidaceae 
bacterium Broad-1]
Length=214

 Score =  171 bits (433),  Expect = 7e-41, Method: Compositional matrix adjust.
 Identities = 106/214 (50%), Positives = 151/214 (71%), Gaps = 0/214 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M + + H  A  ALT  H+ L+ +P+L+GL+ AVPLG L +R  +L  L  A   +++TI
Sbjct  1    MSWFVEHLPAVLALTWRHVYLAGVPLLLGLLVAVPLGWLARRYRVLYPLLIAGTGLLYTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALF+++PL IGT+ILD  NV++A+  YT ALLVR V + L AVP  V+ AATA+G+ 
Sbjct  61   PSLALFILMPLFIGTKILDPVNVVLAMTIYTVALLVRTVADGLGAVPDSVNQAATAMGFG  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
            R+ ++  VELPL++PV+ AGLRV AV+N+++VSV ++IG+  LG  FT G++ N  + I+
Sbjct  121  RVRRLFMVELPLAVPVISAGLRVAAVSNVSIVSVAAIIGVPQLGLLFTDGFRRNFMEPIL  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAA  214
             GVVA  LLA+V D++I    RL TPW+R  RAA
Sbjct  181  VGVVACVLLALVFDLLIIAGTRLITPWQRTRRAA  214


>gi|324998120|ref|ZP_08119232.1| binding-protein-dependent transport systems inner membrane component 
[Pseudonocardia sp. P1]
Length=216

 Score =  169 bits (429),  Expect = 2e-40, Method: Compositional matrix adjust.
 Identities = 112/210 (54%), Positives = 149/210 (71%), Gaps = 0/210 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M ++  +      LT  HL  +L+PVL+GL+ A+PLG L  R    R LT   A  ++T+
Sbjct  1    MDWVFRNSDLVLELTGQHLVFALVPVLVGLLLAIPLGWLANRRSWGRTLTLNAAGFLYTL  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFV LP I+GTRILD  NV++AL  Y  ALLVR V +AL AVP+++ D+ATA+GY 
Sbjct  61   PSLALFVFLPPILGTRILDPVNVVIALTVYVLALLVRTVADALSAVPSRIVDSATAMGYR  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
             + + L VELP+++PV+VAGLRV AV+ I+MV+VGSVIG GGLG  FT G+Q     Q +
Sbjct  121  PVRRFLAVELPMAVPVIVAGLRVAAVSTISMVTVGSVIGFGGLGKMFTEGFQREIPQQTI  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERA  210
            AG+V + LLA+VVD+++ L GRL TPWERA
Sbjct  181  AGIVLVLLLALVVDLLLVLIGRLLTPWERA  210


>gi|226307617|ref|YP_002767577.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226186734|dbj|BAH34838.1| putative ABC transporter permease protein [Rhodococcus erythropolis 
PR4]
Length=227

 Score =  169 bits (428),  Expect = 3e-40, Method: Compositional matrix adjust.
 Identities = 98/189 (52%), Positives = 139/189 (74%), Gaps = 0/189 (0%)

Query  34   VPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPLIIGTRILDEANVIVALAAYTTA  93
            VP+G  ++    LRR+T   AS+ FTIPSLALFV +P + G + LD  NV++AL+ Y TA
Sbjct  34   VPVGTAIRNVRWLRRITLTLASIAFTIPSLALFVTIPQLFGLKTLDPLNVVIALSVYATA  93

Query  94   LLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVS  153
            LL+RAV EALD+VP  V DA+TA+G++ + + L VELPL++PV++A +RV+AVTNI++VS
Sbjct  94   LLIRAVPEALDSVPDNVIDASTAVGFTPLRRALTVELPLALPVMIANIRVIAVTNISLVS  153

Query  154  VGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAIVVDVVINLAGRLATPWERAPRA  213
            VGS+IGIGGLG  F  GY  +  DQIVAG++A+ +LA+ +D+++ L GR  TPW R   +
Sbjct  154  VGSLIGIGGLGVLFKQGYDRDYPDQIVAGIIAIVVLALALDLILYLIGRFLTPWTRTSTS  213

Query  214  ARRRRQVAA  222
            ++    VAA
Sbjct  214  SKVPAVVAA  222


>gi|229493734|ref|ZP_04387516.1| ABC amino acid transporter, permease component [Rhodococcus erythropolis 
SK121]
 gi|229319334|gb|EEN85173.1| ABC amino acid transporter, permease component [Rhodococcus erythropolis 
SK121]
Length=227

 Score =  167 bits (422),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 94/182 (52%), Positives = 135/182 (75%), Gaps = 0/182 (0%)

Query  34   VPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPLIIGTRILDEANVIVALAAYTTA  93
            VP+G  ++    LRR+T   AS+ FTIPSLALFV +P + G + LD  NV++AL+ Y TA
Sbjct  34   VPVGTAIRNVRWLRRITLTLASIAFTIPSLALFVTIPQLFGLKTLDPLNVVIALSVYATA  93

Query  94   LLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVS  153
            LL+RAV EALD+VP  V DA+TA+G++ + +   VELPL++PV++A +RV+AVTNI++VS
Sbjct  94   LLIRAVPEALDSVPDNVIDASTAVGFTPLRRAQTVELPLALPVMIANIRVIAVTNISLVS  153

Query  154  VGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAIVVDVVINLAGRLATPWERAPRA  213
            VGS+IGIGGLG  F  GY  +  DQIVAG++A+ +LA+ +D+++ L GR  TPW R   +
Sbjct  154  VGSLIGIGGLGVLFKQGYDRDYPDQIVAGIIAIVVLALALDLILYLIGRFLTPWTRTSTS  213

Query  214  AR  215
            ++
Sbjct  214  SK  215


>gi|84495391|ref|ZP_00994510.1| ABC-type glycine betaine transport, permease protein [Janibacter 
sp. HTCC2649]
 gi|84384884|gb|EAQ00764.1| ABC-type glycine betaine transport, permease protein [Janibacter 
sp. HTCC2649]
Length=215

 Score =  166 bits (421),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 93/210 (45%), Positives = 140/210 (67%), Gaps = 0/210 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M ++  H    + L   H+ L+ +P+++GL+ A+PLG   +R   L  +  +T+ +++TI
Sbjct  1    MTWINDHWSEIFTLARSHVWLAGVPLILGLLIALPLGWAARRWSRLYPVLISTSGLLYTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALFV++PLI+GT++L+  NV+VA+  YT ALLVR V + L +VP  V  AA A+GY 
Sbjct  61   PSLALFVLMPLILGTQVLNPINVVVAMTVYTVALLVRTVADGLGSVPDHVLQAARAMGYR  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
               +   +ELPL+IPV+ AGLRV AV+N+++VSV S+IG+  LG   T GY    + +IV
Sbjct  121  GFRRFFGIELPLAIPVIAAGLRVAAVSNVSIVSVASLIGVSQLGNLLTDGYDRFITPEIV  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERA  210
             G+V+  +LA++ D +I L  RL TPW RA
Sbjct  181  IGIVSCVVLALLFDGLILLGQRLLTPWVRA  210


>gi|302529979|ref|ZP_07282321.1| amino acid ABC transporter [Streptomyces sp. AA4]
 gi|302438874|gb|EFL10690.1| amino acid ABC transporter [Streptomyces sp. AA4]
Length=230

 Score =  164 bits (416),  Expect = 7e-39, Method: Compositional matrix adjust.
 Identities = 102/196 (53%), Positives = 138/196 (71%), Gaps = 0/196 (0%)

Query  18   HLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPLIIGTRI  77
            ++ L+L+P++ G++ A+  G L  R    R +     ++++TIPSLALFVV+P IIGT+I
Sbjct  28   NIYLALVPLVAGIVLAILFGWLGHRWRPARSVLLVVGNLLYTIPSLALFVVIPGIIGTKI  87

Query  78   LDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELPLSIPVL  137
            LD  NVIVAL  YTTALLVR VL+AL+AVP  +  AATAIGY    +   VELPL++PVL
Sbjct  88   LDSINVIVALTIYTTALLVRPVLDALEAVPPHIVAAATAIGYREPRRFFSVELPLAVPVL  147

Query  138  VAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAIVVDVVI  197
             AG+RV +V+NI++VSVG++IG G LG  FT G+Q      IV G+V   LLA++VD+++
Sbjct  148  AAGVRVASVSNISLVSVGALIGTGALGVLFTDGFQREYFSPIVVGIVLTMLLALIVDLLL  207

Query  198  NLAGRLATPWERAPRA  213
             L   L TPWERA RA
Sbjct  208  VLLRNLLTPWERAGRA  223


>gi|229488645|ref|ZP_04382511.1| ABC quaternary amine transporter, permease component [Rhodococcus 
erythropolis SK121]
 gi|229324149|gb|EEN89904.1| ABC quaternary amine transporter, permease component [Rhodococcus 
erythropolis SK121]
Length=216

 Score =  163 bits (412),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 94/190 (50%), Positives = 138/190 (73%), Gaps = 0/190 (0%)

Query  18   HLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPLIIGTRI  77
            H+ LSL+P++IGL+ A+P+G +  R+  L      TA +++TIPSLALFV+LP I+GT+I
Sbjct  20   HVLLSLIPLVIGLVVALPIGWVAYRSRRLHPYVVGTAGLLYTIPSLALFVLLPPILGTKI  79

Query  78   LDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELPLSIPVL  137
            LD  N+IVAL  YT ALLVR V +ALD+VP +   AATA+GY     +LKV+LP+ +PV+
Sbjct  80   LDPMNIIVALTVYTVALLVRVVADALDSVPPETVLAATAMGYRPYQTLLKVQLPVGVPVI  139

Query  138  VAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAIVVDVVI  197
             AGLRV  V+N+++VS+G+++GI  +G+ FT G+Q      I+AG+    +LA+++D++I
Sbjct  140  CAGLRVAVVSNVSLVSLGALLGIPQIGSLFTQGFQLRFYTPIIAGIALCLVLALILDLLI  199

Query  198  NLAGRLATPW  207
             LA RL TPW
Sbjct  200  MLANRLLTPW  209


>gi|184199680|ref|YP_001853887.1| putative ABC transporter permease protein [Kocuria rhizophila 
DC2201]
 gi|183579910|dbj|BAG28381.1| putative ABC transporter permease protein [Kocuria rhizophila 
DC2201]
Length=250

 Score =  162 bits (409),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 102/234 (44%), Positives = 149/234 (64%), Gaps = 5/234 (2%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M++L  +  A   L   HL  S++PV++GL+ +VPL  L      LR +    +S+++TI
Sbjct  1    MNWLTNNWPAVLELAGAHLVQSVIPVVVGLLMSVPLARLAAGNRWLRPVFVTGSSLLYTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSL LFVVLPL++GTRI    NV+VAL  Y  A+LVR+ ++A +++   V  AATA+GY 
Sbjct  61   PSLTLFVVLPLVLGTRITSVVNVVVALTLYVIAILVRSCVDAFESLDRDVLQAATAMGYK  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
               +   VELPL++PV++AGLRV  V+NI+MVSVG+VIGI  LGT FT G + +   +IV
Sbjct  121  PARRFFGVELPLAVPVMIAGLRVATVSNISMVSVGAVIGIQSLGTLFTDGLRRSIIAEIV  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWER-----APRAARRRRQVAAPITGGAR  229
             G+VA  ++A+V+D ++ L G + T W+R          RRR  V +   GG+R
Sbjct  181  VGIVATVVIAVVLDQLLRLLGHVLTRWQRTGTGPGKPGGRRRGAVRSEAAGGSR  234


>gi|300781609|ref|ZP_07091463.1| ABC superfamily ATP binding cassette transporter permease [Corynebacterium 
genitalium ATCC 33030]
 gi|300533316|gb|EFK54377.1| ABC superfamily ATP binding cassette transporter permease [Corynebacterium 
genitalium ATCC 33030]
Length=200

 Score =  160 bits (406),  Expect = 9e-38, Method: Compositional matrix adjust.
 Identities = 82/192 (43%), Positives = 128/192 (67%), Gaps = 0/192 (0%)

Query  18   HLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPLIIGTRI  77
            HL ++L  ++   + AVPLG    R+   R +     S+I+ IP LA+FV +PL++GT I
Sbjct  9    HLLIALPAIIASFLIAVPLGWAAHRSGRFREVIVVVTSLIYVIPGLAMFVFMPLVLGTSI  68

Query  78   LDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELPLSIPVL  137
            L   NV+VA+  Y  AL+VR+  +A DAVP  V  +ATA GY+ +A++++VELPL+ P L
Sbjct  69   LSPINVVVAMTLYGIALMVRSAADAFDAVPGAVRQSATAAGYTPLARVMRVELPLAGPGL  128

Query  138  VAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAIVVDVVI  197
            ++G+RVVA + ++++SVG+++G+  LGT FT G+Q     +I+AG+V   LLA+++DV +
Sbjct  129  LSGVRVVAASTVSLISVGALVGVQSLGTLFTEGFQRAFPTEIIAGLVGTILLAVLIDVCL  188

Query  198  NLAGRLATPWER  209
             L  RL  PW  
Sbjct  189  TLIARLTMPWRH  200


>gi|317123454|ref|YP_004097566.1| binding-protein-dependent transporters inner membrane component 
[Intrasporangium calvum DSM 43043]
 gi|315587542|gb|ADU46839.1| binding-protein-dependent transport systems inner membrane component 
[Intrasporangium calvum DSM 43043]
Length=215

 Score =  160 bits (406),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 93/213 (44%), Positives = 134/213 (63%), Gaps = 0/213 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M + + H G   +    H  L+ +P+++GL+ A+PLG L  R   L+    +   +++TI
Sbjct  1    MSWALDHLGEILSRAGQHAWLAGIPLVLGLLIALPLGWLAARKAWLKGPLLSGTGLLYTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSLALF++LP I+   ILD  NVIVA+  YT ALL R V +AL +V      AATA+GY 
Sbjct  61   PSLALFILLPSILKRGILDPVNVIVAMTIYTVALLTRTVADALSSVDPSTRAAATAMGYG  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
              A+   V+LPL++PVL AGLRV AV+N+++VSV S+IG+  LG + T GY  + + ++ 
Sbjct  121  GFARFRAVDLPLAVPVLAAGLRVAAVSNVSIVSVASLIGVNQLGYFLTNGYARSFATEVW  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRA  213
             G++A   LA+V DV I+   RL TPW RA  A
Sbjct  181  VGIIACVALAVVFDVAIHGIARLLTPWARAAEA  213


>gi|311743300|ref|ZP_07717107.1| glycine betaine/L-proline ABC superfamily ATP binding cassette 
transporter, permease protein [Aeromicrobium marinum DSM 15272]
 gi|311313368|gb|EFQ83278.1| glycine betaine/L-proline ABC superfamily ATP binding cassette 
transporter, permease protein [Aeromicrobium marinum DSM 15272]
Length=217

 Score =  157 bits (398),  Expect = 9e-37, Method: Compositional matrix adjust.
 Identities = 100/217 (47%), Positives = 145/217 (67%), Gaps = 0/217 (0%)

Query  1    MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI  60
            M +++ +      L + HL LSLLP++IG   AVP+G +  R P LR L     S+++TI
Sbjct  1    MDWVLDNRDYVTGLALDHLWLSLLPIVIGFAVAVPIGWVAHRRPRLRGLLLGGGSILYTI  60

Query  61   PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS  120
            PSL LF++LP I+GT ILD  NV+VAL+ Y  AL+VR+  E   +V   V DAATA GY 
Sbjct  61   PSLPLFIILPSILGTGILDPFNVVVALSLYAIALMVRSAAEGFGSVSPAVLDAATASGYG  120

Query  121  RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV  180
               +   VELPL+ PVL+AGLRVV V+ +++VSVG++IG+  LG+ FT+G++ +   +I+
Sbjct  121  PWRRAFTVELPLAGPVLLAGLRVVTVSTVSLVSVGALIGVSSLGSLFTSGFRRDFDTEIL  180

Query  181  AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRR  217
             GVV + L+A+V+D ++ LAGR+  PW  +PR A  R
Sbjct  181  TGVVGIVLIALVLDGLLVLAGRVLMPWAESPRTAGAR  217


>gi|295129961|ref|YP_003580624.1| ABC transporter, permease protein [Propionibacterium acnes SK137]
 gi|291377009|gb|ADE00864.1| ABC transporter, permease protein [Propionibacterium acnes SK137]
 gi|313772952|gb|EFS38918.1| ABC transporter, permease protein [Propionibacterium acnes HL074PA1]
 13 more sequence titles
 Length=215

 Score =  157 bits (397),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 96/199 (49%), Positives = 132/199 (67%), Gaps = 0/199 (0%)

Query  12   WALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPL  71
            W LT  H  LS+ PVL+ L+ +VPLG    RA   RR+    ASV++ +PSL LFV+LPL
Sbjct  14   WQLTSHHAVLSVTPVLLSLLLSVPLGWWAHRARTARRILVPGASVLYALPSLPLFVLLPL  73

Query  72   IIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELP  131
            I+GT+ILD  NV+VAL  Y  ALLVR   +A D+V   V   A AIG+S      +V LP
Sbjct  74   ILGTKILDPINVVVALTLYGIALLVRTATDAFDSVGRSVRRDAVAIGHSDSQVFWRVALP  133

Query  132  LSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAI  191
            L++P LVAG+RVV+ + +++VSVG+++G+  LG +FT GYQ +   +I  G++   +LAI
Sbjct  134  LAVPALVAGMRVVSASTLSLVSVGALVGVPSLGYFFTDGYQRSFPTEIWVGIIGTLVLAI  193

Query  192  VVDVVINLAGRLATPWERA  210
            + D+VI   GRL TPW RA
Sbjct  194  IFDLVIVCVGRLLTPWRRA  212


>gi|256380260|ref|YP_003103920.1| ABC transporter inner membrane protein [Actinosynnema mirum DSM 
43827]
 gi|255924563|gb|ACU40074.1| binding-protein-dependent transport systems inner membrane component 
[Actinosynnema mirum DSM 43827]
Length=218

 Score =  157 bits (396),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 94/192 (49%), Positives = 134/192 (70%), Gaps = 0/192 (0%)

Query  18   HLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPLIIGTRI  77
            H+ LSL P+L+ ++ A+ LGLL  R    R    A ++V++TIPSLALF ++P +IGT++
Sbjct  24   HVYLSLFPLLVAVVLAIALGLLCHRFRAARATVIALSNVLYTIPSLALFAIIPALIGTKV  83

Query  78   LDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELPLSIPVL  137
            LD  NV+ AL  YTTALLVR V +ALDAVP  V  AATA+G+  + +   VELPL++PVL
Sbjct  84   LDSVNVVAALTLYTTALLVRPVADALDAVPGHVTAAATAMGFRPVRRFFAVELPLAVPVL  143

Query  138  VAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAIVVDVVI  197
             AG+RV +V+NI++VSVG++IG GGLG  FT G++      I+ GVV   +LA+VVD+++
Sbjct  144  AAGVRVGSVSNISLVSVGALIGTGGLGVLFTDGFRQRYLAPIIVGVVLTLVLALVVDLLL  203

Query  198  NLAGRLATPWER  209
                ++ TPW  
Sbjct  204  VALRKVLTPWAE  215


>gi|327334987|gb|EGE76698.1| proline/glycine betaine ABC transporter, permease protein [Propionibacterium 
acnes HL097PA1]
Length=215

 Score =  156 bits (395),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 95/199 (48%), Positives = 132/199 (67%), Gaps = 0/199 (0%)

Query  12   WALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPL  71
            W LT  H  L + PVL+ L+ +VPLG    RA   RR+    ASV++ +PSL LFV+LPL
Sbjct  14   WQLTSHHAVLGVTPVLLSLLLSVPLGWWAHRARTARRILVPGASVLYALPSLPLFVLLPL  73

Query  72   IIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELP  131
            I+GT+ILD  NV+VAL  Y+ ALLVR   +A D+V   V   A AIG+S      +V LP
Sbjct  74   ILGTKILDPINVVVALTLYSIALLVRTATDAFDSVGRSVRRDAVAIGHSDSQVFWRVALP  133

Query  132  LSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAI  191
            L++P LVAG+RVV+ + +++VSVG+++G+  LG +FT GYQ +   +I  G++   +LAI
Sbjct  134  LAVPALVAGMRVVSASTLSLVSVGALVGVPSLGYFFTDGYQRSFPTEIWVGIIGTLVLAI  193

Query  192  VVDVVINLAGRLATPWERA  210
            + D+VI   GRL TPW RA
Sbjct  194  IFDLVIVCVGRLLTPWRRA  212


>gi|226361729|ref|YP_002779507.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226240214|dbj|BAH50562.1| putative ABC transporter permease protein [Rhodococcus opacus 
B4]
Length=216

 Score =  156 bits (395),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 91/190 (48%), Positives = 136/190 (72%), Gaps = 0/190 (0%)

Query  18   HLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPLIIGTRI  77
            H+ LSL+P+++G++ A+P+G L  R   +      TA +++TIPSLALFV+LP I+GT+I
Sbjct  20   HILLSLVPIVVGVIIALPIGWLAHRNRRINPYVVGTAGLLYTIPSLALFVLLPPILGTKI  79

Query  78   LDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELPLSIPVL  137
            LD  N+IVAL  YT A+LVR V +ALD+VP +   AATA+GY     +LKV+LP+ +PV+
Sbjct  80   LDPMNIIVALTIYTVAMLVRVVADALDSVPQETVLAATAMGYRPYQTLLKVQLPVGVPVI  139

Query  138  VAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAIVVDVVI  197
             AGLRV  V+N+++VS+ +++GI  +G+ FT G+Q      I+AG+    LLA+V+D++I
Sbjct  140  CAGLRVAVVSNVSLVSLAALLGIPQIGSLFTQGFQLRFYTPIIAGIALSLLLALVLDLLI  199

Query  198  NLAGRLATPW  207
             LA R+ TPW
Sbjct  200  VLANRILTPW  209


>gi|340774236|gb|EGR96723.1| ABC transporter, permease protein [Propionibacterium acnes SK182B-JCVI]
Length=215

 Score =  156 bits (395),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 93/199 (47%), Positives = 133/199 (67%), Gaps = 0/199 (0%)

Query  12   WALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPL  71
            W LT  H  L + PVL+ L+ +VPLG    R+   RR+   +AS++F +PSL LFV+LPL
Sbjct  14   WQLTSHHAMLGVTPVLVSLLLSVPLGWWAHRSRTARRILVPSASILFALPSLPLFVLLPL  73

Query  72   IIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELP  131
            I+GT+ILD  NV+VAL  Y  ALLVR   +A D+V   V   A A+G+S+     +V LP
Sbjct  74   ILGTKILDPINVVVALTLYGIALLVRTATDAFDSVGRAVRREAVAMGHSKSQVFWRVALP  133

Query  132  LSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAI  191
            L++P LVAG+RVV+ + +++VSVG+++G+  LG +FT GYQ +   +I  G++   +LAI
Sbjct  134  LAVPALVAGMRVVSASTLSLVSVGALVGVPSLGYFFTDGYQRSFPTEIWVGIIGTLVLAI  193

Query  192  VVDVVINLAGRLATPWERA  210
            V D+VI   GRL TPW+ A
Sbjct  194  VFDLVIVCVGRLLTPWQTA  212


>gi|111019581|ref|YP_702553.1| ABC quaternary amine transporter permease [Rhodococcus jostii 
RHA1]
 gi|110819111|gb|ABG94395.1| ABC quaternary amine transporter, permease component [Rhodococcus 
jostii RHA1]
Length=216

 Score =  156 bits (394),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 90/190 (48%), Positives = 136/190 (72%), Gaps = 0/190 (0%)

Query  18   HLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPLIIGTRI  77
            H+ LSL+P+++G++ A+P+G L  R+  +      TA +++TIPSLALFV+LP I+GT+I
Sbjct  20   HILLSLVPLVVGVIVALPIGWLAHRSRRINPYVVGTAGLLYTIPSLALFVLLPPILGTKI  79

Query  78   LDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELPLSIPVL  137
            LD  N++VAL  YT ALLVR + +ALD+VP +   AATA+GY     +LKV+LP+ +PV+
Sbjct  80   LDPMNIVVALTIYTVALLVRVIADALDSVPQETVLAATAMGYRPYQTLLKVQLPVGVPVI  139

Query  138  VAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAIVVDVVI  197
             AGLRV  V+N+++VS+ +++GI  +G+ FT G+Q      I+ G+    LLA+V+D++I
Sbjct  140  CAGLRVAVVSNVSLVSLAALLGIPQIGSLFTQGFQLRFYTPIITGIALCLLLALVLDLLI  199

Query  198  NLAGRLATPW  207
             LA RL TPW
Sbjct  200  VLANRLLTPW  209


>gi|326329327|ref|ZP_08195652.1| proline/glycine betaine ABC transporter, permease protein [Nocardioidaceae 
bacterium Broad-1]
 gi|325952902|gb|EGD44917.1| proline/glycine betaine ABC transporter, permease protein [Nocardioidaceae 
bacterium Broad-1]
Length=218

 Score =  155 bits (393),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 97/209 (47%), Positives = 136/209 (66%), Gaps = 1/209 (0%)

Query  3    YLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPS  62
            YL T+ G      V H+ L+LLPV I  + ++PLG LV R   +R +   T SV++TIPS
Sbjct  7    YLETNIGDILTALVQHIWLALLPVAIAFVLSLPLGALVHRYAPVRHIALTTGSVVYTIPS  66

Query  63   LALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRI  122
            LAL ++LP ++GT +LD  NV+VAL  Y+ ALLVR   + LDAV + V  AATA+GY  +
Sbjct  67   LALLLLLPGVLGTSVLDPLNVVVALTLYSLALLVRTTADGLDAVDSTVLQAATAMGYRPL  126

Query  123  AQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKS-DQIVA  181
             +   V+LPL++PV++ GLRV  V N++MVS+ +++GIGGLG  FT G+Q       I+ 
Sbjct  127  RRWFAVQLPLAMPVILTGLRVATVANVSMVSIAALVGIGGLGQLFTRGFQLGFYLPPIII  186

Query  182  GVVAMFLLAIVVDVVINLAGRLATPWERA  210
            G+V   +LA+V DV+I    R  TPW RA
Sbjct  187  GLVLSVMLAVVADVLIVAVQRGLTPWSRA  215


>gi|282853470|ref|ZP_06262807.1| ABC transporter, permease protein [Propionibacterium acnes J139]
 gi|282582923|gb|EFB88303.1| ABC transporter, permease protein [Propionibacterium acnes J139]
 gi|314922213|gb|EFS86044.1| ABC transporter, permease protein [Propionibacterium acnes HL001PA1]
 6 more sequence titles
 Length=215

 Score =  155 bits (393),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 94/199 (48%), Positives = 131/199 (66%), Gaps = 0/199 (0%)

Query  12   WALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPL  71
            W LT  H  L + PVL+ L+ +VPLG    RA   RR+    AS+++ +PSL LFVVLPL
Sbjct  14   WQLTSHHALLGVTPVLLSLLLSVPLGWWAHRARTARRILVPGASILYALPSLPLFVVLPL  73

Query  72   IIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELP  131
            I+GT+ILD  NV+VAL  Y  ALLVR   +A D+V   V   A AIG+S      +V LP
Sbjct  74   ILGTKILDPINVVVALTLYGIALLVRTATDAFDSVGRSVRRDAVAIGHSDSQVFWRVALP  133

Query  132  LSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAI  191
            L++P LVAG+RVV+ + +++VSVG+++G+  LG +FT GYQ +   +I  G++   +L I
Sbjct  134  LAVPALVAGMRVVSASTLSLVSVGALVGVPSLGYFFTDGYQRSFPTEIWVGIIGTLVLGI  193

Query  192  VVDVVINLAGRLATPWERA  210
            + D+VI   GRL TPW+RA
Sbjct  194  IFDLVIVCVGRLLTPWQRA  212


>gi|313793025|gb|EFS41092.1| ABC transporter, permease protein [Propionibacterium acnes HL110PA1]
Length=215

 Score =  155 bits (392),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 95/199 (48%), Positives = 131/199 (66%), Gaps = 0/199 (0%)

Query  12   WALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPL  71
            W LT  H  L + PVL+ L+ +VPLG    RA   RR+    ASV++ +PSL LFV+LPL
Sbjct  14   WQLTSHHAVLGVTPVLLSLLLSVPLGWWAHRARTARRILVPGASVLYALPSLPLFVLLPL  73

Query  72   IIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELP  131
            I+GT+ILD  NV+VAL  Y  ALLVR   +A D+V   V   A AIG+S      +V LP
Sbjct  74   ILGTKILDPINVVVALTLYGIALLVRTATDAFDSVGRSVRRNAVAIGHSDSQVFWRVALP  133

Query  132  LSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAI  191
            L++P LVAG+RVV+ + +++VSVG+++G+  LG +FT GYQ +   +I  G++   +LAI
Sbjct  134  LAVPALVAGMRVVSASTLSLVSVGALVGVPSLGYFFTDGYQRSFPTEIWVGIIGTLVLAI  193

Query  192  VVDVVINLAGRLATPWERA  210
            + D+VI   GRL TPW RA
Sbjct  194  IFDLVIVCVGRLLTPWRRA  212


>gi|289424233|ref|ZP_06426016.1| ABC transporter, permease protein [Propionibacterium acnes SK187]
 gi|289426641|ref|ZP_06428370.1| ABC transporter, permease protein [Propionibacterium acnes J165]
 gi|289154930|gb|EFD03612.1| ABC transporter, permease protein [Propionibacterium acnes SK187]
 39 more sequence titles
 Length=215

 Score =  155 bits (392),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 95/199 (48%), Positives = 131/199 (66%), Gaps = 0/199 (0%)

Query  12   WALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPL  71
            W LT  H  L + PVL+ L+ +VPLG    RA   RR+    ASV++ +PSL LFV+LPL
Sbjct  14   WQLTSHHAVLGVTPVLLSLLLSVPLGWWAHRARTARRILVPGASVLYALPSLPLFVLLPL  73

Query  72   IIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELP  131
            I+GT+ILD  NV+VAL  Y  ALLVR   +A D+V   V   A AIG+S      +V LP
Sbjct  74   ILGTKILDPINVVVALTLYGIALLVRTATDAFDSVGRSVRRDAVAIGHSDSQVFWRVALP  133

Query  132  LSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAI  191
            L++P LVAG+RVV+ + +++VSVG+++G+  LG +FT GYQ +   +I  G++   +LAI
Sbjct  134  LAVPALVAGMRVVSASTLSLVSVGALVGVPSLGYFFTDGYQRSFPTEIWVGIIGTLVLAI  193

Query  192  VVDVVINLAGRLATPWERA  210
            + D+VI   GRL TPW RA
Sbjct  194  IFDLVIVCVGRLLTPWRRA  212


>gi|258651639|ref|YP_003200795.1| binding-protein-dependent transporters inner membrane component 
[Nakamurella multipartita DSM 44233]
 gi|258554864|gb|ACV77806.1| binding-protein-dependent transport systems inner membrane component 
[Nakamurella multipartita DSM 44233]
Length=216

 Score =  154 bits (389),  Expect = 8e-36, Method: Compositional matrix adjust.
 Identities = 84/160 (53%), Positives = 116/160 (73%), Gaps = 0/160 (0%)

Query  54   ASVIFTIPSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDA  113
            A +++T+PS+ALFVVLP ++GTRILD  NV+VAL  YT ALLVR V +ALDAVP  V  +
Sbjct  56   AGLLYTVPSIALFVVLPAVLGTRILDPLNVVVALTLYTVALLVRVVADALDAVPPLVVAS  115

Query  114  ATAIGYSRIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQT  173
            ATA+GY  +  +L V+LPL+IPV+ AGLRV AV+N+++VSV +++GI  LG  FT G+Q 
Sbjct  116  ATAMGYQPLRSLLTVQLPLAIPVIGAGLRVAAVSNVSLVSVAALLGIPQLGQLFTVGFQL  175

Query  174  NKSDQIVAGVVAMFLLAIVVDVVINLAGRLATPWERAPRA  213
            +    I AG+V   +LA + D +I +  R+ TPW RA +A
Sbjct  176  DFFTPIWAGIVLCLVLAGIFDAIIQILVRITTPWARAVKA  215


>gi|50841888|ref|YP_055115.1| ABC transporter-associated permease [Propionibacterium acnes 
KPA171202]
 gi|335052571|ref|ZP_08545451.1| ABC transporter, permease protein [Propionibacterium sp. 409-HC1]
 gi|335054981|ref|ZP_08547776.1| ABC transporter, permease protein [Propionibacterium sp. 434-HC2]
 8 more sequence titles
 Length=215

 Score =  154 bits (388),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 94/199 (48%), Positives = 131/199 (66%), Gaps = 0/199 (0%)

Query  12   WALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPL  71
            W LT  H  L + PVL+ L+ +VPLG    RA   RR+    ASV++ +PSL LFV+LPL
Sbjct  14   WQLTSHHAVLGVTPVLLSLLLSVPLGWWAHRARTARRILVPGASVLYALPSLPLFVLLPL  73

Query  72   IIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELP  131
            I+GT+ILD  NV+VAL  Y  A+LVR   +A D+V   V   A AIG+S      +V LP
Sbjct  74   ILGTKILDPINVVVALTLYGIAVLVRTATDAFDSVGRSVRRDAVAIGHSDSQVFWRVALP  133

Query  132  LSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAI  191
            L++P LVAG+RVV+ + +++VSVG+++G+  LG +FT GYQ +   +I  G++   +LAI
Sbjct  134  LAVPALVAGMRVVSASTLSLVSVGALVGVPSLGYFFTDGYQRSFPTEIWVGIIGTLVLAI  193

Query  192  VVDVVINLAGRLATPWERA  210
            + D+VI   GRL TPW RA
Sbjct  194  IFDLVIVCVGRLLTPWRRA  212



Lambda     K      H
   0.327    0.138    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 297403917052


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40