BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3757c
Length=229
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610893|ref|NP_218274.1| osmoprotectant (glycine betaine/car... 438 3e-121
gi|296166875|ref|ZP_06849292.1| glycine betaine/L-proline ABC su... 352 2e-95
gi|342860002|ref|ZP_08716654.1| ABC transporter permease [Mycoba... 339 2e-91
gi|183985268|ref|YP_001853559.1| osmoprotectant (glycine betaine... 338 3e-91
gi|118619515|ref|YP_907847.1| osmoprotectant (glycine betaine/ca... 336 1e-90
gi|240168516|ref|ZP_04747175.1| osmoprotectant (glycine betaine/... 326 1e-87
gi|118464857|ref|YP_879607.1| ABC transporter permease [Mycobact... 324 7e-87
gi|41406372|ref|NP_959208.1| ProW [Mycobacterium avium subsp. pa... 323 1e-86
gi|254773329|ref|ZP_05214845.1| ABC transporter, permease protei... 321 7e-86
gi|254822450|ref|ZP_05227451.1| ABC transporter, permease protei... 319 2e-85
gi|108801928|ref|YP_642125.1| binding-protein-dependent transpor... 305 4e-81
gi|145221801|ref|YP_001132479.1| binding-protein-dependent trans... 298 4e-79
gi|315446462|ref|YP_004079341.1| ABC-type proline/glycine betain... 298 5e-79
gi|118472530|ref|YP_890549.1| amino acid ABC transporter permeas... 289 3e-76
gi|120406541|ref|YP_956370.1| binding-protein-dependent transpor... 284 9e-75
gi|169627368|ref|YP_001701017.1| osmoprotectant ABC transporter ... 279 2e-73
gi|220913301|ref|YP_002488610.1| binding-protein-dependent trans... 199 2e-49
gi|111022965|ref|YP_705937.1| amino acid ABC transporter permeas... 191 9e-47
gi|296394995|ref|YP_003659879.1| binding-protein-dependent trans... 190 1e-46
gi|226365471|ref|YP_002783254.1| ABC transporter permease protei... 190 1e-46
gi|119962177|ref|YP_948526.1| ABC-type proline/glycine betaine t... 187 7e-46
gi|317508896|ref|ZP_07966533.1| inner membrane transporter [Segn... 187 9e-46
gi|325964042|ref|YP_004241948.1| ABC-type proline/glycine betain... 186 3e-45
gi|331698883|ref|YP_004335122.1| ABC transporter integral membra... 184 8e-45
gi|312138891|ref|YP_004006227.1| glycine/betaine ABC transporter... 183 1e-44
gi|256826382|ref|YP_003150342.1| proline/glycine betaine ABC tra... 176 2e-42
gi|116671387|ref|YP_832320.1| binding-protein-dependent transpor... 171 6e-41
gi|326332750|ref|ZP_08199011.1| proline/glycine betaine ABC tran... 171 7e-41
gi|324998120|ref|ZP_08119232.1| binding-protein-dependent transp... 169 2e-40
gi|226307617|ref|YP_002767577.1| ABC transporter permease protei... 169 3e-40
gi|229493734|ref|ZP_04387516.1| ABC amino acid transporter, perm... 167 2e-39
gi|84495391|ref|ZP_00994510.1| ABC-type glycine betaine transpor... 166 2e-39
gi|302529979|ref|ZP_07282321.1| amino acid ABC transporter [Stre... 164 7e-39
gi|229488645|ref|ZP_04382511.1| ABC quaternary amine transporter... 163 2e-38
gi|184199680|ref|YP_001853887.1| putative ABC transporter permea... 162 5e-38
gi|300781609|ref|ZP_07091463.1| ABC superfamily ATP binding cass... 160 9e-38
gi|317123454|ref|YP_004097566.1| binding-protein-dependent trans... 160 1e-37
gi|311743300|ref|ZP_07717107.1| glycine betaine/L-proline ABC su... 157 9e-37
gi|295129961|ref|YP_003580624.1| ABC transporter, permease prote... 157 1e-36
gi|256380260|ref|YP_003103920.1| ABC transporter inner membrane ... 157 1e-36
gi|327334987|gb|EGE76698.1| proline/glycine betaine ABC transpor... 156 2e-36
gi|226361729|ref|YP_002779507.1| ABC transporter permease protei... 156 2e-36
gi|340774236|gb|EGR96723.1| ABC transporter, permease protein [P... 156 2e-36
gi|111019581|ref|YP_702553.1| ABC quaternary amine transporter p... 156 3e-36
gi|326329327|ref|ZP_08195652.1| proline/glycine betaine ABC tran... 155 3e-36
gi|282853470|ref|ZP_06262807.1| ABC transporter, permease protei... 155 3e-36
gi|313793025|gb|EFS41092.1| ABC transporter, permease protein [P... 155 4e-36
gi|289424233|ref|ZP_06426016.1| ABC transporter, permease protei... 155 4e-36
gi|258651639|ref|YP_003200795.1| binding-protein-dependent trans... 154 8e-36
gi|50841888|ref|YP_055115.1| ABC transporter-associated permease... 154 1e-35
>gi|15610893|ref|NP_218274.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
transport integral membrane protein ABC transporter PROW [Mycobacterium
tuberculosis H37Rv]
gi|15843377|ref|NP_338414.1| amino acid ABC transporter, permease protein [Mycobacterium tuberculosis
CDC1551]
gi|31794927|ref|NP_857420.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
transport integral membrane protein ABC transporter PROW [Mycobacterium
bovis AF2122/97]
80 more sequence titles
Length=229
Score = 438 bits (1127), Expect = 3e-121, Method: Compositional matrix adjust.
Identities = 229/229 (100%), Positives = 229/229 (100%), Gaps = 0/229 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI
Sbjct 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS
Sbjct 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV
Sbjct 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR 229
AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR
Sbjct 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR 229
>gi|296166875|ref|ZP_06849292.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
transporter, permease protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897752|gb|EFG77341.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
transporter, permease protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=228
Score = 352 bits (904), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 186/229 (82%), Positives = 203/229 (89%), Gaps = 1/229 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
MHYL+TH AWALTVVHLRLSL+PVL+GL AVPLG V+RAP+ RRLTTATASV+FTI
Sbjct 1 MHYLLTHLDDAWALTVVHLRLSLVPVLVGLALAVPLGAAVRRAPVARRLTTATASVVFTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFVVLP+IIGTRILDEANV+VAL AYT ALLVRAVLEALDAVPAQV DAATA+GY
Sbjct 61 PSLALFVVLPMIIGTRILDEANVMVALTAYTAALLVRAVLEALDAVPAQVRDAATAVGYP 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
+A+MLKVELPLSIPVLVAGLRVV VTNIAMVSVGSVIGIGGLGTWFT GYQTNKSDQI+
Sbjct 121 PVARMLKVELPLSIPVLVAGLRVVVVTNIAMVSVGSVIGIGGLGTWFTEGYQTNKSDQIL 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR 229
AG+VA+F+LAIV+D +I AGRL TPWERA R RRR V API GGAR
Sbjct 181 AGIVALFVLAIVIDALIVAAGRLVTPWERAARTP-RRRSVMAPIVGGAR 228
>gi|342860002|ref|ZP_08716654.1| ABC transporter permease [Mycobacterium colombiense CECT 3035]
gi|342132380|gb|EGT85609.1| ABC transporter permease [Mycobacterium colombiense CECT 3035]
Length=228
Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/229 (78%), Positives = 200/229 (88%), Gaps = 1/229 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
MHYL+TH AW LTVVHLRL+L+PVLIGL A+PLG+LVQR L RR+TTA A V+FTI
Sbjct 1 MHYLLTHLDDAWGLTVVHLRLALVPVLIGLAIALPLGMLVQRTRLARRVTTAAAGVVFTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFVVLP++IGTRILDEANV+VAL AYT ALLVRAVLEALDAVP QV DAATA+GY
Sbjct 61 PSLALFVVLPMLIGTRILDEANVMVALTAYTAALLVRAVLEALDAVPGQVRDAATAVGYP 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
I +MLKVELPLS+PVLVAGLRVV VTNIAMVSVGSVIGIGGLG+WFT GYQTNKSDQI+
Sbjct 121 PITRMLKVELPLSVPVLVAGLRVVVVTNIAMVSVGSVIGIGGLGSWFTQGYQTNKSDQIL 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR 229
AG++A+FLLA+V+DV+I LAGRLATPW A R+A RR V AP+ GGAR
Sbjct 181 AGIIALFLLAVVIDVLIVLAGRLATPWAHATRSA-GRRSVVAPVVGGAR 228
>gi|183985268|ref|YP_001853559.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
transport integral membrane protein ABC transporter ProW [Mycobacterium
marinum M]
gi|183178594|gb|ACC43704.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
transport integral membrane protein ABC transporter ProW [Mycobacterium
marinum M]
Length=226
Score = 338 bits (868), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 182/229 (80%), Positives = 204/229 (90%), Gaps = 3/229 (1%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
MHYLMTH G AWALT+VHLRLSL+PVLIG A+PLGL VQ AP LRRLTTATASV+FTI
Sbjct 1 MHYLMTHLGTAWALTMVHLRLSLIPVLIGTAIAIPLGLFVQHAPTLRRLTTATASVVFTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFVVLPLII TRIL EANVI+AL+AYTTALLVRAVLEALDAVPAQV DAA A+GYS
Sbjct 61 PSLALFVVLPLIIKTRILQEANVIIALSAYTTALLVRAVLEALDAVPAQVRDAAVAVGYS 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
IA+MLKVELPLSIPVLV+GLRVV VTNIAMVSVG+VIGIGGLGTWFTAGY +KSDQIV
Sbjct 121 PIARMLKVELPLSIPVLVSGLRVVVVTNIAMVSVGAVIGIGGLGTWFTAGYLMDKSDQIV 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR 229
AG+ MF+LAI++D+V+N+AGRLATPWE R++R RR+ +PI GGAR
Sbjct 181 AGITVMFVLAILIDMVLNVAGRLATPWE---RSSRGRRRFRSPIVGGAR 226
>gi|118619515|ref|YP_907847.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
transport integral membrane protein ABC transporter ProW [Mycobacterium
ulcerans Agy99]
gi|118571625|gb|ABL06376.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
transport integral membrane protein ABC transporter ProW [Mycobacterium
ulcerans Agy99]
Length=226
Score = 336 bits (862), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 181/229 (80%), Positives = 203/229 (89%), Gaps = 3/229 (1%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
MHYLMTH G AWALT+VHLRLSL+PVLIG A+PLGL VQ AP LRRLTTATASV+FTI
Sbjct 1 MHYLMTHLGTAWALTMVHLRLSLIPVLIGTAIAIPLGLFVQHAPTLRRLTTATASVVFTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFVVLPLII RIL EANVI+AL+AYTTALLVRAVLEALDAVPAQV DAA A+GYS
Sbjct 61 PSLALFVVLPLIIKMRILQEANVIIALSAYTTALLVRAVLEALDAVPAQVRDAAVAVGYS 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
IA+MLKVELPLSIPVLV+GLRVV VTNIAMVSVG+VIGIGGLGTWFTAGY +KSDQIV
Sbjct 121 PIARMLKVELPLSIPVLVSGLRVVVVTNIAMVSVGAVIGIGGLGTWFTAGYLMDKSDQIV 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR 229
AG+ MF+LAI++D+V+N+AGRLATPWE R++R RR+ +PI GGAR
Sbjct 181 AGITVMFVLAILIDMVLNVAGRLATPWE---RSSRGRRRFRSPIVGGAR 226
>gi|240168516|ref|ZP_04747175.1| osmoprotectant (glycine betaine/carnitine/choline/L-proline)
transport integral membrane protein ABC transporter ProW [Mycobacterium
kansasii ATCC 12478]
Length=226
Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/208 (81%), Positives = 187/208 (90%), Gaps = 0/208 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M YL+TH AW LTV+HLRLSL+PVLIG+ AVPLGL VQ AP+LRRLTTA AS++FTI
Sbjct 1 MRYLLTHLDTAWVLTVIHLRLSLIPVLIGMAIAVPLGLAVQHAPVLRRLTTAAASIVFTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFV LPLII TRILDEANVIVAL AYTTALLVR VLEALDAVPA V DAA A+GYS
Sbjct 61 PSLALFVALPLIIKTRILDEANVIVALTAYTTALLVRTVLEALDAVPAPVRDAAVAVGYS 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
I +M+KVELPLSIPVLVAGLRVV VTNIAMVSVGSVIGIGGLGTWFTAGYQT+KSDQIV
Sbjct 121 PIRRMIKVELPLSIPVLVAGLRVVVVTNIAMVSVGSVIGIGGLGTWFTAGYQTDKSDQIV 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWE 208
AG++AMF LA+V+D++++LAGRLATPWE
Sbjct 181 AGIIAMFALAVVIDMLLSLAGRLATPWE 208
>gi|118464857|ref|YP_879607.1| ABC transporter permease [Mycobacterium avium 104]
gi|118166144|gb|ABK67041.1| ABC transporter, permease protein [Mycobacterium avium 104]
Length=228
Score = 324 bits (830), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 170/229 (75%), Positives = 193/229 (85%), Gaps = 1/229 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
MHYL+TH A LTVVHLRLSL+PVLIGL A+PLG+LVQR RRLTTA ASV+FTI
Sbjct 1 MHYLLTHLDDAARLTVVHLRLSLVPVLIGLAIALPLGMLVQRRRFARRLTTAVASVVFTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFVVLP+IIGTRILDEANV+VAL AYT ALLVRAVLEALDAVPAQ+ DAATA+GY
Sbjct 61 PSLALFVVLPMIIGTRILDEANVMVALTAYTAALLVRAVLEALDAVPAQISDAATAVGYP 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
R+ +M+KVELPL++PVL+AGLRVV VTNIAMVSVGSVIGIGGLG+WFT GYQT KSDQI+
Sbjct 121 RLTRMMKVELPLAVPVLIAGLRVVVVTNIAMVSVGSVIGIGGLGSWFTQGYQTGKSDQIL 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR 229
AG++A+F LA+ VD +I L GRL TPW A R RR V AP+ GGAR
Sbjct 181 AGIIALFALAVAVDGLIVLGGRLVTPWAHAVRGG-ARRSVVAPVVGGAR 228
>gi|41406372|ref|NP_959208.1| ProW [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41394720|gb|AAS02591.1| ProW [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336459996|gb|EGO38906.1| ABC-type proline/glycine betaine transport system, permease component
[Mycobacterium avium subsp. paratuberculosis S397]
Length=228
Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 169/229 (74%), Positives = 194/229 (85%), Gaps = 1/229 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
MHYL+TH A LTVVHLRL+L+PVLIGL A+PLG+LVQR RRLTTA ASV+FTI
Sbjct 1 MHYLLTHLDDAARLTVVHLRLALVPVLIGLAIALPLGMLVQRRRFARRLTTAVASVVFTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFVVLP+IIGTRILDEANV+VAL AYT ALLVRAVLEALDAVPAQ+ DAATA+GY
Sbjct 61 PSLALFVVLPMIIGTRILDEANVMVALTAYTAALLVRAVLEALDAVPAQISDAATAVGYP 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
R+++M+KVELPL++PVL+AGLRVV VTNIAMVSVGSVIGIGGLG+WFT GYQT KSDQI+
Sbjct 121 RLSRMMKVELPLAVPVLIAGLRVVVVTNIAMVSVGSVIGIGGLGSWFTQGYQTGKSDQIL 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR 229
AG++A+F LA+ VD +I L GRL TPW A R RR V AP+ GGAR
Sbjct 181 AGIIALFALAVAVDGLIVLGGRLVTPWAHAVRGG-ARRSVVAPVVGGAR 228
>gi|254773329|ref|ZP_05214845.1| ABC transporter, permease protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length=228
Score = 321 bits (822), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 169/229 (74%), Positives = 192/229 (84%), Gaps = 1/229 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
MHYL+TH A LTVVHLRLSL+PVLIGL A+PLG+LVQR RRLTTA ASV+FTI
Sbjct 1 MHYLLTHLDDAARLTVVHLRLSLVPVLIGLAIALPLGMLVQRRRFARRLTTAVASVVFTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFVVLP+IIGTRILDEANV+VAL AYT ALLVRAVLEALDAVPAQ+ DAATA+GY
Sbjct 61 PSLALFVVLPMIIGTRILDEANVMVALTAYTAALLVRAVLEALDAVPAQISDAATAVGYP 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
R+ +M+KVELPL++PVL+AGLRVV VTNIAMVSVGSVI IGGLG+WFT GYQT KSDQI+
Sbjct 121 RLTRMMKVELPLAVPVLIAGLRVVVVTNIAMVSVGSVIRIGGLGSWFTQGYQTGKSDQIL 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR 229
AG++A+F LA+ VD +I L GRL TPW A R RR V AP+ GGAR
Sbjct 181 AGIIALFALAVAVDGLIVLGGRLVTPWAHAVRGG-ARRSVVAPVVGGAR 228
>gi|254822450|ref|ZP_05227451.1| ABC transporter, permease protein [Mycobacterium intracellulare
ATCC 13950]
Length=228
Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/229 (74%), Positives = 194/229 (85%), Gaps = 1/229 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
MHYL+TH AW LT+VHLRLSL+PV+IGL A+PLGL VQR + R LTTA ASV+FTI
Sbjct 1 MHYLLTHLDDAWWLTIVHLRLSLVPVVIGLAIALPLGLAVQRTRIARTLTTAAASVVFTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFVVLP+IIGTRILDEANVIVAL AYT ALLVRAVLEALDAVPAQ DAA A+GY
Sbjct 61 PSLALFVVLPMIIGTRILDEANVIVALTAYTAALLVRAVLEALDAVPAQTRDAAVAVGYP 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
I +++KV+LPL++PVL+AGLRVV VTNIAMVSVGSVIGIGGLG+WFT GYQT+KSDQI+
Sbjct 121 PITRIVKVDLPLAVPVLIAGLRVVVVTNIAMVSVGSVIGIGGLGSWFTQGYQTDKSDQIL 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGGAR 229
AG++A+F LA+V+DV+I AGRLATPW A A RR V AP+ GGAR
Sbjct 181 AGIIALFALAVVIDVLIVCAGRLATPWVCAVDTA-GRRSVVAPVVGGAR 228
>gi|108801928|ref|YP_642125.1| binding-protein-dependent transport systems inner membrane component
[Mycobacterium sp. MCS]
gi|119871080|ref|YP_941032.1| binding-protein-dependent transport systems inner membrane component
[Mycobacterium sp. KMS]
gi|126437909|ref|YP_001073600.1| binding-protein-dependent transport systems inner membrane component
[Mycobacterium sp. JLS]
gi|108772347|gb|ABG11069.1| binding-protein-dependent transport systems inner membrane component
[Mycobacterium sp. MCS]
gi|119697169|gb|ABL94242.1| binding-protein-dependent transport systems inner membrane component
[Mycobacterium sp. KMS]
gi|126237709|gb|ABO01110.1| binding-protein-dependent transport systems inner membrane component
[Mycobacterium sp. JLS]
Length=222
Score = 305 bits (781), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 158/222 (72%), Positives = 185/222 (84%), Gaps = 0/222 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M YL+TH WALTV+HLRLSL+P+++GL+ AVPLG LVQR LRRLTT TAS+IFTI
Sbjct 1 MRYLLTHLDDLWALTVIHLRLSLIPIVLGLLIAVPLGALVQRTTALRRLTTITASIIFTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFVVLPLII TRILDEANVIVAL YT ALLVRAV EALDAV V DAATA+GY
Sbjct 61 PSLALFVVLPLIIPTRILDEANVIVALTLYTVALLVRAVPEALDAVSPAVLDAATAVGYK 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
+ +MLK+ELPL++PVL+A LRVVAVTNI+MVSVGSVIG+GGLGTWFT GYQ NKSDQIV
Sbjct 121 PLTRMLKIELPLAVPVLIASLRVVAVTNISMVSVGSVIGVGGLGTWFTEGYQANKSDQIV 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAA 222
AG++A+F+LA+V+D +I L G+ TPW RA R AR++ AA
Sbjct 181 AGIIAIFVLAVVIDTLIMLIGKALTPWARATRPARQKAGAAA 222
>gi|145221801|ref|YP_001132479.1| binding-protein-dependent transport systems inner membrane component
[Mycobacterium gilvum PYR-GCK]
gi|145214287|gb|ABP43691.1| binding-protein-dependent transport systems inner membrane component
[Mycobacterium gilvum PYR-GCK]
Length=224
Score = 298 bits (763), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 156/219 (72%), Positives = 182/219 (84%), Gaps = 1/219 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M YL TH W LT++HLRLSL+P+++GL+ AVPLG LVQR LRRLTT TAS+IFTI
Sbjct 1 MRYLFTHLDDLWVLTLIHLRLSLIPIVLGLLIAVPLGALVQRTTALRRLTTVTASIIFTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFVVLPLII TRILDEANVIVAL YT ALLVRAV EALDAV V DAATA+GY
Sbjct 61 PSLALFVVLPLIIPTRILDEANVIVALTLYTVALLVRAVPEALDAVSPAVLDAATAVGYR 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
+ +MLKVELPL++PVL+A LRVVAVTNI+MV+VGSVIGIGGLGTWFT GYQ NKSDQI+
Sbjct 121 PLTRMLKVELPLALPVLIASLRVVAVTNISMVAVGSVIGIGGLGTWFTEGYQANKSDQII 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERA-PRAARRRR 218
AG+VA+F+LAIV+D +I G+L TPW RA PR+ R ++
Sbjct 181 AGIVAIFVLAIVIDTLIMWLGKLLTPWTRAQPRSTRTQK 219
>gi|315446462|ref|YP_004079341.1| ABC-type proline/glycine betaine transporter, permease [Mycobacterium
sp. Spyr1]
gi|315264765|gb|ADU01507.1| ABC-type proline/glycine betaine transport system, permease component
[Mycobacterium sp. Spyr1]
Length=224
Score = 298 bits (762), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 156/219 (72%), Positives = 181/219 (83%), Gaps = 1/219 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M YL TH W LT++HLRLSL+P+++GL+ AVPLG LVQR LRRLTT TAS+IFTI
Sbjct 1 MRYLFTHLDDLWVLTLIHLRLSLIPIVLGLLIAVPLGALVQRTTALRRLTTVTASIIFTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFVVLPLII TRILDEANVIVAL YT ALLVRAV EALDAV V DAATA+GY
Sbjct 61 PSLALFVVLPLIIPTRILDEANVIVALTLYTVALLVRAVPEALDAVSPAVLDAATAVGYR 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
+ +MLKVELPL++PVL+A LRVVAVTNI+MV+VGSVIGIGGLGTWFT GYQ NKSDQI+
Sbjct 121 PLTRMLKVELPLALPVLIASLRVVAVTNISMVAVGSVIGIGGLGTWFTEGYQANKSDQII 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERA-PRAARRRR 218
AG+VA+F+LAIV+D +I G+L TPW RA PR R ++
Sbjct 181 AGIVAIFVLAIVIDTLIMWLGKLLTPWTRAQPRTTRTQK 219
>gi|118472530|ref|YP_890549.1| amino acid ABC transporter permease [Mycobacterium smegmatis
str. MC2 155]
gi|118173817|gb|ABK74713.1| amino acid ABC transporter, permease protein [Mycobacterium smegmatis
str. MC2 155]
Length=214
Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 158/210 (76%), Positives = 178/210 (85%), Gaps = 0/210 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M YL+TH W LTV+HLRLSL+P+++GL+ AVPLG LVQR LRRLTT AS+IFTI
Sbjct 1 MQYLLTHLDDLWELTVIHLRLSLVPIVLGLLIAVPLGALVQRTTTLRRLTTVAASIIFTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFV LPLII TRILDEANVIVAL YTTALLVRAV EALDAVP V DAATA+GY
Sbjct 61 PSLALFVALPLIIPTRILDEANVIVALTLYTTALLVRAVPEALDAVPEHVRDAATAVGYR 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
+ +MLKVELPLSIPVLVA LRVVAVTNI+MVSVGSVIGIGGLGTWFT GYQ+NKS QI+
Sbjct 121 PLTRMLKVELPLSIPVLVASLRVVAVTNISMVSVGSVIGIGGLGTWFTEGYQSNKSSQII 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERA 210
AG++A+F+LAIVVD +I LAG+L PW RA
Sbjct 181 AGIIAIFVLAIVVDTLIMLAGKLIAPWNRA 210
>gi|120406541|ref|YP_956370.1| binding-protein-dependent transport systems inner membrane component
[Mycobacterium vanbaalenii PYR-1]
gi|119959359|gb|ABM16364.1| binding-protein-dependent transport systems inner membrane component
[Mycobacterium vanbaalenii PYR-1]
Length=226
Score = 284 bits (726), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 160/225 (72%), Positives = 188/225 (84%), Gaps = 2/225 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M YL+TH A W L+++HLRLSL+P+L+GL+ AVPLG LVQR +LRRLTT TAS++FTI
Sbjct 1 MRYLVTHLDALWTLSLIHLRLSLIPILLGLLIAVPLGALVQRTTVLRRLTTVTASIVFTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFVVLPLII TRILDEANVIVAL YT ALLVRAV EALDAV V DAATA+GY
Sbjct 61 PSLALFVVLPLIIPTRILDEANVIVALTLYTVALLVRAVPEALDAVSPAVLDAATAVGYR 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
+ +MLK+ELPL++PVL+A LRVVAVTNI+MV+VGSVIGIGGLGTWFT GYQ NKSDQI+
Sbjct 121 PLTRMLKIELPLALPVLIASLRVVAVTNISMVAVGSVIGIGGLGTWFTEGYQANKSDQII 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERA-PRAARR-RRQVAAP 223
AG+VA+F+LAIV+D +I LAG+ TPW RA PRA R R + AP
Sbjct 181 AGIVAIFVLAIVIDTLIMLAGKALTPWTRAQPRATRAPRAEAGAP 225
>gi|169627368|ref|YP_001701017.1| osmoprotectant ABC transporter ProW [Mycobacterium abscessus
ATCC 19977]
gi|169239335|emb|CAM60363.1| Possible osmoprotectant (glycine betaine/ carnitine/choline/l-proline)
ABC transporter ProW [Mycobacterium abscessus]
Length=217
Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/214 (70%), Positives = 180/214 (85%), Gaps = 0/214 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M YL TH G AW L+++HLRLSL+P+LIGL A+P G L+ R +RR+TT AS++FTI
Sbjct 1 MRYLFTHLGDAWQLSLIHLRLSLVPILIGLAIAIPCGALLHRRRTVRRVTTVIASIVFTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFV LPLII TRILDEANV+VAL YTTALL+RAV EALDA+ QV DAATA+GY
Sbjct 61 PSLALFVALPLIIPTRILDEANVMVALTLYTTALLIRAVPEALDAIAPQVRDAATAVGYR 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
+A++++VELPLSIPVLVAGLRVVAVTNI+MVSVGSVIGIGGLGTWFT GYQ NKS QI+
Sbjct 121 PLARLVRVELPLSIPVLVAGLRVVAVTNISMVSVGSVIGIGGLGTWFTEGYQANKSSQII 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAA 214
AG+VA+FLLA++VD ++ + GR+ATPW RA + A
Sbjct 181 AGIVAIFLLAVIVDSLLVVLGRVATPWARATKTA 214
>gi|220913301|ref|YP_002488610.1| binding-protein-dependent transporters inner membrane component
[Arthrobacter chlorophenolicus A6]
gi|219860179|gb|ACL40521.1| binding-protein-dependent transport systems inner membrane component
[Arthrobacter chlorophenolicus A6]
Length=242
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/241 (45%), Positives = 164/241 (69%), Gaps = 12/241 (4%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M + +++ G + HL L+L+P+++GL+ ++PL L +R LR + ++S+++TI
Sbjct 1 MEWFLSNSGMVFERAGQHLVLALVPMVLGLVLSIPLAQLARRNGALRSVVLTSSSLLYTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALF++LP I+GTR+LD NVIVAL Y ALLVRA L+A D+V +V AA A+GY
Sbjct 61 PSLALFIILPTILGTRVLDPLNVIVALTIYAVALLVRAALDAFDSVDQEVSQAAVAMGYR 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
+A+ L+V+LPLS+PV+ AGLRVV+V+NI++VSV +++GIG LG FT+G Q + +IV
Sbjct 121 PLARFLQVDLPLSLPVMFAGLRVVSVSNISLVSVAALLGIGNLGMLFTSGLQRDFVTEIV 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRR------------RQVAAPITGGA 228
G+VA+ +LA+++D V+ L R+ TPW RA + +R+ R++A P GG
Sbjct 181 VGIVAILVLALLMDAVLVLLERILTPWVRAGKQSRQDLDANADEPEVAARRLAQPQAGGG 240
Query 229 R 229
Sbjct 241 N 241
>gi|111022965|ref|YP_705937.1| amino acid ABC transporter permease [Rhodococcus jostii RHA1]
gi|110822495|gb|ABG97779.1| ABC amino acid transporter, permease component [Rhodococcus jostii
RHA1]
Length=232
Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 123/231 (54%), Positives = 168/231 (73%), Gaps = 3/231 (1%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M +L+ + LT HL L+L+P+LIGL+ AVP+G ++ A LR++T A + FTI
Sbjct 1 MRWLIDNFSVVVDLTKTHLYLALVPLLIGLLIAVPVGTAIRGASWLRKITLIVAGIAFTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFV +P ++G +ILD NV++AL Y+TALL+RAV EALD+VPA V D+ATA+G++
Sbjct 61 PSLALFVTIPSVVGLQILDPLNVVIALTIYSTALLIRAVPEALDSVPADVVDSATAMGFT 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
R+ + L VELPL++PVLVA +RVVAVTNI++VSVGS+IGIGGLGT FT GYQ + DQI+
Sbjct 121 RLRRALTVELPLALPVLVANVRVVAVTNISLVSVGSLIGIGGLGTLFTQGYQRDYPDQIL 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARR---RRQVAAPITGGA 228
AG++A+ +LA+ D+++ L GR TPW R + R Q AAP G A
Sbjct 181 AGIIAIVVLALAFDLLLFLVGRALTPWTRQQKVRRTPLVAGQSAAPAAGEA 231
>gi|296394995|ref|YP_003659879.1| binding-protein-dependent transporter inner membrane component
[Segniliparus rotundus DSM 44985]
gi|296182142|gb|ADG99048.1| binding-protein-dependent transport systems inner membrane component
[Segniliparus rotundus DSM 44985]
Length=213
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 145/212 (69%), Gaps = 0/212 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M++L H A + H LSLLP++IG+ A+P+G V RAP RR + A ++++FTI
Sbjct 1 MNWLAHHWDKARPMAWEHAWLSLLPIVIGVAVALPIGAAVARAPWARRFSDACSNIVFTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALF VLP ++G L NV+ AL YT A+ V+ + EAL AV V AA A+G+S
Sbjct 61 PSLALFAVLPGVLGFGFLSPLNVVAALTLYTAAMQVKTIPEALAAVDPDVLAAADAVGWS 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
A++++V+LPL+ PVL A LRVVA NI+MV+VGSVIG+GGLG F +GYQ + D IV
Sbjct 121 PTARLVRVDLPLAAPVLFANLRVVAAANISMVAVGSVIGVGGLGQLFLSGYQRDYPDMIV 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPR 212
AG++A+ +LA+ VD V+ + GR TPW RA R
Sbjct 181 AGIIAVLVLALGVDAVLVVLGRALTPWTRARR 212
>gi|226365471|ref|YP_002783254.1| ABC transporter permease protein [Rhodococcus opacus B4]
gi|226243961|dbj|BAH54309.1| putative ABC transporter permease protein [Rhodococcus opacus
B4]
Length=232
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/227 (54%), Positives = 166/227 (74%), Gaps = 6/227 (2%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M +L+ + LT HL L+L+P+LIGL+ AVP+G ++ A LR+LT A + FTI
Sbjct 1 MRWLIDNFSVVVDLTKTHLYLALVPLLIGLLIAVPVGTAIRGASWLRKLTLIVAGIAFTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFV +P ++G +ILD NV++AL Y+TALLVRAV EALD+VPA V D+ATA+G++
Sbjct 61 PSLALFVTIPSVVGLQILDPLNVVIALTIYSTALLVRAVPEALDSVPADVVDSATAMGFT 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
R+ + L VELPL++PVLVA +RVVAVTNI++VSVGS+IGIGGLGT FT GYQ + DQI+
Sbjct 121 RLRRALTVELPLALPVLVANVRVVAVTNISLVSVGSLIGIGGLGTLFTQGYQRDYPDQIL 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPITGG 227
AG++++ +LA+ D+++ L GR TPW R + R AP+ G
Sbjct 181 AGIISIVVLALAFDLLLFLVGRALTPWTRQQKVRR------APLVAG 221
>gi|119962177|ref|YP_948526.1| ABC-type proline/glycine betaine transport systems, permease
component [Arthrobacter aurescens TC1]
gi|119949036|gb|ABM07947.1| ABC-type proline/glycine betaine transport systems, permease
component [Arthrobacter aurescens TC1]
Length=246
Score = 187 bits (476), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 98/225 (44%), Positives = 151/225 (68%), Gaps = 0/225 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M + + + G L H+ L+++P+++GL+ +VPL L +R LR + S+++TI
Sbjct 1 MEWFLANSGMVLGLAGQHMVLAIIPMILGLLISVPLAQLARRNSTLRSVVATATSLLYTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALF++LP I+GTRILD NV+VAL Y ALLVRA ++A D+V + +AA A+G+
Sbjct 61 PSLALFIILPTILGTRILDPLNVVVALTIYAVALLVRAAMDAFDSVDDDLRNAAVAMGFK 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
+A+ +V+LPLS+PVL AGLRVV+V+NI++VSV +++G+G LG FT G Q ++V
Sbjct 121 PLARFFQVDLPLSLPVLFAGLRVVSVSNISLVSVAALLGVGNLGVLFTDGLQRTFITEVV 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAAPIT 225
G++A+ +LA+++D V+ + RL TPW RA R A +T
Sbjct 181 VGIIAILVLALLMDAVLVVLERLLTPWSRAAGGKPSRPDANALLT 225
>gi|317508896|ref|ZP_07966533.1| inner membrane transporter [Segniliparus rugosus ATCC BAA-974]
gi|316252780|gb|EFV12213.1| inner membrane transporter [Segniliparus rugosus ATCC BAA-974]
Length=213
Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 110/212 (52%), Positives = 152/212 (72%), Gaps = 0/212 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M++L+ H G AW + H LSLLP++IG++ A+P+G+ V R P LRR + A +++++TI
Sbjct 1 MNWLVHHWGKAWPMAWEHAWLSLLPLVIGVVVALPVGVAVARRPWLRRTSDALSNIVYTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALF VLP ++G L NV+VAL YT A+ V+A+ EAL AV V +AA AIG++
Sbjct 61 PSLALFAVLPGVLGFGFLSPLNVVVALTLYTVAMQVKAIPEALAAVDRHVLEAADAIGWA 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
A++++V+LPL+ PVLVA LRVVA NI+MV+VGSVIG+GGLG F +GYQ N D IV
Sbjct 121 PAARLVRVDLPLAAPVLVANLRVVAAANISMVAVGSVIGVGGLGQLFLSGYQRNYPDVIV 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPR 212
AG+V + +LA+ VD+ + L GR TPW R R
Sbjct 181 AGIVLVLVLALAVDLALVLIGRALTPWARPGR 212
>gi|325964042|ref|YP_004241948.1| ABC-type proline/glycine betaine transporter, permease [Arthrobacter
phenanthrenivorans Sphe3]
gi|323470129|gb|ADX73814.1| ABC-type proline/glycine betaine transport system, permease component
[Arthrobacter phenanthrenivorans Sphe3]
Length=243
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/222 (47%), Positives = 152/222 (69%), Gaps = 0/222 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M + + + G HL L+L+P+++GL ++PL L ++ LR + +S+++TI
Sbjct 1 MEWFLANSGMVLERAGQHLLLALVPMVLGLAISIPLAQLARQNRPLRSVVLTASSLLYTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALF++LP I+GTRILD NV+VAL Y ALLVRA L+A D+V V AA A+GY
Sbjct 61 PSLALFIILPTILGTRILDPLNVVVALTIYAVALLVRAALDAFDSVSGDVSQAAVAMGYK 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
+A+ L V+LPLS+PVL AGLRVV+V+NI++VSV +++GIG LG FT+G Q +IV
Sbjct 121 PLARFLHVDLPLSLPVLFAGLRVVSVSNISLVSVAALLGIGNLGMLFTSGLQRGFITEIV 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRRRQVAA 222
G++A+ +LA+++D + L RL TPWERA R R ++ A+
Sbjct 181 VGIIAILILALLMDAFLVLLERLVTPWERAGRRENREQEAAS 222
>gi|331698883|ref|YP_004335122.1| ABC transporter integral membrane subunit [Pseudonocardia dioxanivorans
CB1190]
gi|326953572|gb|AEA27269.1| ABC-type transporter, integral membrane subunit [Pseudonocardia
dioxanivorans CB1190]
Length=220
Score = 184 bits (467), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/216 (52%), Positives = 159/216 (74%), Gaps = 0/216 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M+++ + G L H+ SL+PV+IGL+ A+PLG L RA + R + A +++TI
Sbjct 1 MNWVSQNLGFIAGLLSDHIVFSLVPVVIGLVLAIPLGWLANRAGVGRTVVVNLAGLLYTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFV LP+++GT ILD NVIVAL Y+ ALLVR V +AL+AVP + DAATA+GY+
Sbjct 61 PSLALFVFLPVVLGTGILDPVNVIVALTVYSLALLVRTVADALEAVPPVLVDAATAMGYA 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
+ + L VELP+S+PV++AG+RV AV++I++V+VGSVIG GGLG FT G+Q + + ++V
Sbjct 121 PVRRFLAVELPVSVPVILAGVRVAAVSSISLVTVGSVIGFGGLGQMFTDGFQRDITAEVV 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARR 216
AG+V + LA+VVD ++ L GRL TPW+RA RA R+
Sbjct 181 AGIVLVVALALVVDGLLLLVGRLLTPWDRAARATRQ 216
>gi|312138891|ref|YP_004006227.1| glycine/betaine ABC transporter integral membrane subunit [Rhodococcus
equi 103S]
gi|325676402|ref|ZP_08156080.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
transporter, permease protein [Rhodococcus equi ATCC 33707]
gi|311888230|emb|CBH47542.1| putative ABC-type glycine betaine transporter integral membrane
subunit [Rhodococcus equi 103S]
gi|325552580|gb|EGD22264.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
transporter, permease protein [Rhodococcus equi ATCC 33707]
Length=229
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/208 (57%), Positives = 156/208 (75%), Gaps = 0/208 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M YL + LT HL L+LLP+L+GL+ A+PLG V+R LRR T AS+ FT+
Sbjct 1 MRYLTENFSYVLELTREHLSLALLPLLLGLVIAIPLGTAVRRVRWLRRTTLVIASIAFTV 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFV +P ++G ILD ANV++AL Y+TALLVRAV EALDAVP V D+ATA+G++
Sbjct 61 PSLALFVTVPTVVGLPILDPANVVIALTVYSTALLVRAVPEALDAVPEDVVDSATAMGFT 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
+ + L VELPL++PVL+A +RVVAVTNI++VSVG++IG+GGLG FT GYQ + +QIV
Sbjct 121 PLRRALTVELPLALPVLLANVRVVAVTNISLVSVGALIGVGGLGELFTKGYQRDYPEQIV 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWE 208
AG+VA+ +LA++ D + LAGR TPW+
Sbjct 181 AGIVAIVVLALLFDAALYLAGRFLTPWQ 208
>gi|256826382|ref|YP_003150342.1| proline/glycine betaine ABC transporter permease [Kytococcus
sedentarius DSM 20547]
gi|256689775|gb|ACV07577.1| ABC-type proline/glycine betaine transport system, permease component
[Kytococcus sedentarius DSM 20547]
Length=214
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/202 (50%), Positives = 138/202 (69%), Gaps = 0/202 (0%)
Query 12 WALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPL 71
W L + H+ L+ LP+LIGL A+PLG + R P LR + +++++TIPSLALF++LP
Sbjct 13 WELGLAHVYLAGLPLLIGLALALPLGWVAARIPRLRTALVSGSALLYTIPSLALFILLPG 72
Query 72 IIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELP 131
IIGT+ILD NV++A++ YT ALLVR V + L AVP V AATA+G R ++ +VELP
Sbjct 73 IIGTQILDPLNVLIAMSLYTVALLVRNVADGLGAVPEHVRQAATAMGLGRWRRLTRVELP 132
Query 132 LSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAI 191
L++PV+ AGLRV AV+N+++VSV +++GI LG FT G+ + I G+ LLA+
Sbjct 133 LAVPVIAAGLRVAAVSNVSIVSVAALVGIPQLGILFTRGFNRDDLGMIAVGMAGCVLLAL 192
Query 192 VVDVVINLAGRLATPWERAPRA 213
+ D VI L RL TPW R RA
Sbjct 193 LFDAVILLLRRLLTPWLREVRA 214
>gi|116671387|ref|YP_832320.1| binding-protein-dependent transport systems inner membrane component
[Arthrobacter sp. FB24]
gi|116611496|gb|ABK04220.1| binding-protein-dependent transport systems inner membrane component
[Arthrobacter sp. FB24]
Length=236
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/237 (44%), Positives = 155/237 (66%), Gaps = 12/237 (5%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M + + + G + L HL L+++P+++GL ++PL +R LR + S+++T+
Sbjct 1 MEWFLANSGRVFELAGQHLVLAIVPMVLGLALSIPLAQFARRNRTLRSVVVTATSLLYTV 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALF++LP I+GTR+LD NVIVAL Y ALLVRA L+A D+V + AA A+G+
Sbjct 61 PSLALFIILPSILGTRVLDPVNVIVALTIYAVALLVRAALDAFDSVDEDLRQAAVAMGFK 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
A+ L+++LPLS+PVL AGLRVV+V+NI++VSV +++GIG LG FT+G Q ++V
Sbjct 121 PGARFLQIDLPLSLPVLFAGLRVVSVSNISLVSVAALLGIGNLGMLFTSGLQRGFITEVV 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERA---------PRAARRRRQVAAPITGGA 228
G++A+ +LA+++D ++ L RL TPW RA P AA R V A GGA
Sbjct 181 VGIIAILVLALLMDALLVLLERLLTPWTRAAGRTDKAALPSAAERLSDVRA---GGA 234
>gi|326332750|ref|ZP_08199011.1| proline/glycine betaine ABC transporter, permease protein [Nocardioidaceae
bacterium Broad-1]
gi|325949449|gb|EGD41528.1| proline/glycine betaine ABC transporter, permease protein [Nocardioidaceae
bacterium Broad-1]
Length=214
Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/214 (50%), Positives = 151/214 (71%), Gaps = 0/214 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M + + H A ALT H+ L+ +P+L+GL+ AVPLG L +R +L L A +++TI
Sbjct 1 MSWFVEHLPAVLALTWRHVYLAGVPLLLGLLVAVPLGWLARRYRVLYPLLIAGTGLLYTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALF+++PL IGT+ILD NV++A+ YT ALLVR V + L AVP V+ AATA+G+
Sbjct 61 PSLALFILMPLFIGTKILDPVNVVLAMTIYTVALLVRTVADGLGAVPDSVNQAATAMGFG 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
R+ ++ VELPL++PV+ AGLRV AV+N+++VSV ++IG+ LG FT G++ N + I+
Sbjct 121 RVRRLFMVELPLAVPVISAGLRVAAVSNVSIVSVAAIIGVPQLGLLFTDGFRRNFMEPIL 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAA 214
GVVA LLA+V D++I RL TPW+R RAA
Sbjct 181 VGVVACVLLALVFDLLIIAGTRLITPWQRTRRAA 214
>gi|324998120|ref|ZP_08119232.1| binding-protein-dependent transport systems inner membrane component
[Pseudonocardia sp. P1]
Length=216
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/210 (54%), Positives = 149/210 (71%), Gaps = 0/210 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M ++ + LT HL +L+PVL+GL+ A+PLG L R R LT A ++T+
Sbjct 1 MDWVFRNSDLVLELTGQHLVFALVPVLVGLLLAIPLGWLANRRSWGRTLTLNAAGFLYTL 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFV LP I+GTRILD NV++AL Y ALLVR V +AL AVP+++ D+ATA+GY
Sbjct 61 PSLALFVFLPPILGTRILDPVNVVIALTVYVLALLVRTVADALSAVPSRIVDSATAMGYR 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
+ + L VELP+++PV+VAGLRV AV+ I+MV+VGSVIG GGLG FT G+Q Q +
Sbjct 121 PVRRFLAVELPMAVPVIVAGLRVAAVSTISMVTVGSVIGFGGLGKMFTEGFQREIPQQTI 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERA 210
AG+V + LLA+VVD+++ L GRL TPWERA
Sbjct 181 AGIVLVLLLALVVDLLLVLIGRLLTPWERA 210
>gi|226307617|ref|YP_002767577.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
gi|226186734|dbj|BAH34838.1| putative ABC transporter permease protein [Rhodococcus erythropolis
PR4]
Length=227
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/189 (52%), Positives = 139/189 (74%), Gaps = 0/189 (0%)
Query 34 VPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPLIIGTRILDEANVIVALAAYTTA 93
VP+G ++ LRR+T AS+ FTIPSLALFV +P + G + LD NV++AL+ Y TA
Sbjct 34 VPVGTAIRNVRWLRRITLTLASIAFTIPSLALFVTIPQLFGLKTLDPLNVVIALSVYATA 93
Query 94 LLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVS 153
LL+RAV EALD+VP V DA+TA+G++ + + L VELPL++PV++A +RV+AVTNI++VS
Sbjct 94 LLIRAVPEALDSVPDNVIDASTAVGFTPLRRALTVELPLALPVMIANIRVIAVTNISLVS 153
Query 154 VGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAIVVDVVINLAGRLATPWERAPRA 213
VGS+IGIGGLG F GY + DQIVAG++A+ +LA+ +D+++ L GR TPW R +
Sbjct 154 VGSLIGIGGLGVLFKQGYDRDYPDQIVAGIIAIVVLALALDLILYLIGRFLTPWTRTSTS 213
Query 214 ARRRRQVAA 222
++ VAA
Sbjct 214 SKVPAVVAA 222
>gi|229493734|ref|ZP_04387516.1| ABC amino acid transporter, permease component [Rhodococcus erythropolis
SK121]
gi|229319334|gb|EEN85173.1| ABC amino acid transporter, permease component [Rhodococcus erythropolis
SK121]
Length=227
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/182 (52%), Positives = 135/182 (75%), Gaps = 0/182 (0%)
Query 34 VPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPLIIGTRILDEANVIVALAAYTTA 93
VP+G ++ LRR+T AS+ FTIPSLALFV +P + G + LD NV++AL+ Y TA
Sbjct 34 VPVGTAIRNVRWLRRITLTLASIAFTIPSLALFVTIPQLFGLKTLDPLNVVIALSVYATA 93
Query 94 LLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVS 153
LL+RAV EALD+VP V DA+TA+G++ + + VELPL++PV++A +RV+AVTNI++VS
Sbjct 94 LLIRAVPEALDSVPDNVIDASTAVGFTPLRRAQTVELPLALPVMIANIRVIAVTNISLVS 153
Query 154 VGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAIVVDVVINLAGRLATPWERAPRA 213
VGS+IGIGGLG F GY + DQIVAG++A+ +LA+ +D+++ L GR TPW R +
Sbjct 154 VGSLIGIGGLGVLFKQGYDRDYPDQIVAGIIAIVVLALALDLILYLIGRFLTPWTRTSTS 213
Query 214 AR 215
++
Sbjct 214 SK 215
>gi|84495391|ref|ZP_00994510.1| ABC-type glycine betaine transport, permease protein [Janibacter
sp. HTCC2649]
gi|84384884|gb|EAQ00764.1| ABC-type glycine betaine transport, permease protein [Janibacter
sp. HTCC2649]
Length=215
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/210 (45%), Positives = 140/210 (67%), Gaps = 0/210 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M ++ H + L H+ L+ +P+++GL+ A+PLG +R L + +T+ +++TI
Sbjct 1 MTWINDHWSEIFTLARSHVWLAGVPLILGLLIALPLGWAARRWSRLYPVLISTSGLLYTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALFV++PLI+GT++L+ NV+VA+ YT ALLVR V + L +VP V AA A+GY
Sbjct 61 PSLALFVLMPLILGTQVLNPINVVVAMTVYTVALLVRTVADGLGSVPDHVLQAARAMGYR 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
+ +ELPL+IPV+ AGLRV AV+N+++VSV S+IG+ LG T GY + +IV
Sbjct 121 GFRRFFGIELPLAIPVIAAGLRVAAVSNVSIVSVASLIGVSQLGNLLTDGYDRFITPEIV 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERA 210
G+V+ +LA++ D +I L RL TPW RA
Sbjct 181 IGIVSCVVLALLFDGLILLGQRLLTPWVRA 210
>gi|302529979|ref|ZP_07282321.1| amino acid ABC transporter [Streptomyces sp. AA4]
gi|302438874|gb|EFL10690.1| amino acid ABC transporter [Streptomyces sp. AA4]
Length=230
Score = 164 bits (416), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/196 (53%), Positives = 138/196 (71%), Gaps = 0/196 (0%)
Query 18 HLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPLIIGTRI 77
++ L+L+P++ G++ A+ G L R R + ++++TIPSLALFVV+P IIGT+I
Sbjct 28 NIYLALVPLVAGIVLAILFGWLGHRWRPARSVLLVVGNLLYTIPSLALFVVIPGIIGTKI 87
Query 78 LDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELPLSIPVL 137
LD NVIVAL YTTALLVR VL+AL+AVP + AATAIGY + VELPL++PVL
Sbjct 88 LDSINVIVALTIYTTALLVRPVLDALEAVPPHIVAAATAIGYREPRRFFSVELPLAVPVL 147
Query 138 VAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAIVVDVVI 197
AG+RV +V+NI++VSVG++IG G LG FT G+Q IV G+V LLA++VD+++
Sbjct 148 AAGVRVASVSNISLVSVGALIGTGALGVLFTDGFQREYFSPIVVGIVLTMLLALIVDLLL 207
Query 198 NLAGRLATPWERAPRA 213
L L TPWERA RA
Sbjct 208 VLLRNLLTPWERAGRA 223
>gi|229488645|ref|ZP_04382511.1| ABC quaternary amine transporter, permease component [Rhodococcus
erythropolis SK121]
gi|229324149|gb|EEN89904.1| ABC quaternary amine transporter, permease component [Rhodococcus
erythropolis SK121]
Length=216
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/190 (50%), Positives = 138/190 (73%), Gaps = 0/190 (0%)
Query 18 HLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPLIIGTRI 77
H+ LSL+P++IGL+ A+P+G + R+ L TA +++TIPSLALFV+LP I+GT+I
Sbjct 20 HVLLSLIPLVIGLVVALPIGWVAYRSRRLHPYVVGTAGLLYTIPSLALFVLLPPILGTKI 79
Query 78 LDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELPLSIPVL 137
LD N+IVAL YT ALLVR V +ALD+VP + AATA+GY +LKV+LP+ +PV+
Sbjct 80 LDPMNIIVALTVYTVALLVRVVADALDSVPPETVLAATAMGYRPYQTLLKVQLPVGVPVI 139
Query 138 VAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAIVVDVVI 197
AGLRV V+N+++VS+G+++GI +G+ FT G+Q I+AG+ +LA+++D++I
Sbjct 140 CAGLRVAVVSNVSLVSLGALLGIPQIGSLFTQGFQLRFYTPIIAGIALCLVLALILDLLI 199
Query 198 NLAGRLATPW 207
LA RL TPW
Sbjct 200 MLANRLLTPW 209
>gi|184199680|ref|YP_001853887.1| putative ABC transporter permease protein [Kocuria rhizophila
DC2201]
gi|183579910|dbj|BAG28381.1| putative ABC transporter permease protein [Kocuria rhizophila
DC2201]
Length=250
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 102/234 (44%), Positives = 149/234 (64%), Gaps = 5/234 (2%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M++L + A L HL S++PV++GL+ +VPL L LR + +S+++TI
Sbjct 1 MNWLTNNWPAVLELAGAHLVQSVIPVVVGLLMSVPLARLAAGNRWLRPVFVTGSSLLYTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSL LFVVLPL++GTRI NV+VAL Y A+LVR+ ++A +++ V AATA+GY
Sbjct 61 PSLTLFVVLPLVLGTRITSVVNVVVALTLYVIAILVRSCVDAFESLDRDVLQAATAMGYK 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
+ VELPL++PV++AGLRV V+NI+MVSVG+VIGI LGT FT G + + +IV
Sbjct 121 PARRFFGVELPLAVPVMIAGLRVATVSNISMVSVGAVIGIQSLGTLFTDGLRRSIIAEIV 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWER-----APRAARRRRQVAAPITGGAR 229
G+VA ++A+V+D ++ L G + T W+R RRR V + GG+R
Sbjct 181 VGIVATVVIAVVLDQLLRLLGHVLTRWQRTGTGPGKPGGRRRGAVRSEAAGGSR 234
>gi|300781609|ref|ZP_07091463.1| ABC superfamily ATP binding cassette transporter permease [Corynebacterium
genitalium ATCC 33030]
gi|300533316|gb|EFK54377.1| ABC superfamily ATP binding cassette transporter permease [Corynebacterium
genitalium ATCC 33030]
Length=200
Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 82/192 (43%), Positives = 128/192 (67%), Gaps = 0/192 (0%)
Query 18 HLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPLIIGTRI 77
HL ++L ++ + AVPLG R+ R + S+I+ IP LA+FV +PL++GT I
Sbjct 9 HLLIALPAIIASFLIAVPLGWAAHRSGRFREVIVVVTSLIYVIPGLAMFVFMPLVLGTSI 68
Query 78 LDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELPLSIPVL 137
L NV+VA+ Y AL+VR+ +A DAVP V +ATA GY+ +A++++VELPL+ P L
Sbjct 69 LSPINVVVAMTLYGIALMVRSAADAFDAVPGAVRQSATAAGYTPLARVMRVELPLAGPGL 128
Query 138 VAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAIVVDVVI 197
++G+RVVA + ++++SVG+++G+ LGT FT G+Q +I+AG+V LLA+++DV +
Sbjct 129 LSGVRVVAASTVSLISVGALVGVQSLGTLFTEGFQRAFPTEIIAGLVGTILLAVLIDVCL 188
Query 198 NLAGRLATPWER 209
L RL PW
Sbjct 189 TLIARLTMPWRH 200
>gi|317123454|ref|YP_004097566.1| binding-protein-dependent transporters inner membrane component
[Intrasporangium calvum DSM 43043]
gi|315587542|gb|ADU46839.1| binding-protein-dependent transport systems inner membrane component
[Intrasporangium calvum DSM 43043]
Length=215
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/213 (44%), Positives = 134/213 (63%), Gaps = 0/213 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M + + H G + H L+ +P+++GL+ A+PLG L R L+ + +++TI
Sbjct 1 MSWALDHLGEILSRAGQHAWLAGIPLVLGLLIALPLGWLAARKAWLKGPLLSGTGLLYTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSLALF++LP I+ ILD NVIVA+ YT ALL R V +AL +V AATA+GY
Sbjct 61 PSLALFILLPSILKRGILDPVNVIVAMTIYTVALLTRTVADALSSVDPSTRAAATAMGYG 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
A+ V+LPL++PVL AGLRV AV+N+++VSV S+IG+ LG + T GY + + ++
Sbjct 121 GFARFRAVDLPLAVPVLAAGLRVAAVSNVSIVSVASLIGVNQLGYFLTNGYARSFATEVW 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRA 213
G++A LA+V DV I+ RL TPW RA A
Sbjct 181 VGIIACVALAVVFDVAIHGIARLLTPWARAAEA 213
>gi|311743300|ref|ZP_07717107.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
transporter, permease protein [Aeromicrobium marinum DSM 15272]
gi|311313368|gb|EFQ83278.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
transporter, permease protein [Aeromicrobium marinum DSM 15272]
Length=217
Score = 157 bits (398), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/217 (47%), Positives = 145/217 (67%), Gaps = 0/217 (0%)
Query 1 MHYLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTI 60
M +++ + L + HL LSLLP++IG AVP+G + R P LR L S+++TI
Sbjct 1 MDWVLDNRDYVTGLALDHLWLSLLPIVIGFAVAVPIGWVAHRRPRLRGLLLGGGSILYTI 60
Query 61 PSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYS 120
PSL LF++LP I+GT ILD NV+VAL+ Y AL+VR+ E +V V DAATA GY
Sbjct 61 PSLPLFIILPSILGTGILDPFNVVVALSLYAIALMVRSAAEGFGSVSPAVLDAATASGYG 120
Query 121 RIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIV 180
+ VELPL+ PVL+AGLRVV V+ +++VSVG++IG+ LG+ FT+G++ + +I+
Sbjct 121 PWRRAFTVELPLAGPVLLAGLRVVTVSTVSLVSVGALIGVSSLGSLFTSGFRRDFDTEIL 180
Query 181 AGVVAMFLLAIVVDVVINLAGRLATPWERAPRAARRR 217
GVV + L+A+V+D ++ LAGR+ PW +PR A R
Sbjct 181 TGVVGIVLIALVLDGLLVLAGRVLMPWAESPRTAGAR 217
>gi|295129961|ref|YP_003580624.1| ABC transporter, permease protein [Propionibacterium acnes SK137]
gi|291377009|gb|ADE00864.1| ABC transporter, permease protein [Propionibacterium acnes SK137]
gi|313772952|gb|EFS38918.1| ABC transporter, permease protein [Propionibacterium acnes HL074PA1]
13 more sequence titles
gi|313811088|gb|EFS48802.1| ABC transporter, permease protein [Propionibacterium acnes HL083PA1]
gi|313831854|gb|EFS69568.1| ABC transporter, permease protein [Propionibacterium acnes HL007PA1]
gi|313834604|gb|EFS72318.1| ABC transporter, permease protein [Propionibacterium acnes HL056PA1]
gi|313840165|gb|EFS77879.1| ABC transporter, permease protein [Propionibacterium acnes HL086PA1]
gi|314974605|gb|EFT18700.1| ABC transporter, permease protein [Propionibacterium acnes HL053PA1]
gi|314977202|gb|EFT21297.1| ABC transporter, permease protein [Propionibacterium acnes HL045PA1]
gi|314985700|gb|EFT29792.1| ABC transporter, permease protein [Propionibacterium acnes HL005PA1]
gi|315097441|gb|EFT69417.1| ABC transporter, permease protein [Propionibacterium acnes HL038PA1]
gi|327331474|gb|EGE73213.1| proline/glycine betaine ABC transporter, permease protein [Propionibacterium
acnes HL096PA2]
gi|327447136|gb|EGE93790.1| ABC transporter, permease protein [Propionibacterium acnes HL043PA1]
gi|327449829|gb|EGE96483.1| ABC transporter, permease protein [Propionibacterium acnes HL043PA2]
gi|328761817|gb|EGF75330.1| proline/glycine betaine ABC transporter, permease protein [Propionibacterium
acnes HL099PA1]
gi|340769378|gb|EGR91902.1| ABC transporter, permease protein [Propionibacterium acnes SK182]
Length=215
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/199 (49%), Positives = 132/199 (67%), Gaps = 0/199 (0%)
Query 12 WALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPL 71
W LT H LS+ PVL+ L+ +VPLG RA RR+ ASV++ +PSL LFV+LPL
Sbjct 14 WQLTSHHAVLSVTPVLLSLLLSVPLGWWAHRARTARRILVPGASVLYALPSLPLFVLLPL 73
Query 72 IIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELP 131
I+GT+ILD NV+VAL Y ALLVR +A D+V V A AIG+S +V LP
Sbjct 74 ILGTKILDPINVVVALTLYGIALLVRTATDAFDSVGRSVRRDAVAIGHSDSQVFWRVALP 133
Query 132 LSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAI 191
L++P LVAG+RVV+ + +++VSVG+++G+ LG +FT GYQ + +I G++ +LAI
Sbjct 134 LAVPALVAGMRVVSASTLSLVSVGALVGVPSLGYFFTDGYQRSFPTEIWVGIIGTLVLAI 193
Query 192 VVDVVINLAGRLATPWERA 210
+ D+VI GRL TPW RA
Sbjct 194 IFDLVIVCVGRLLTPWRRA 212
>gi|256380260|ref|YP_003103920.1| ABC transporter inner membrane protein [Actinosynnema mirum DSM
43827]
gi|255924563|gb|ACU40074.1| binding-protein-dependent transport systems inner membrane component
[Actinosynnema mirum DSM 43827]
Length=218
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/192 (49%), Positives = 134/192 (70%), Gaps = 0/192 (0%)
Query 18 HLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPLIIGTRI 77
H+ LSL P+L+ ++ A+ LGLL R R A ++V++TIPSLALF ++P +IGT++
Sbjct 24 HVYLSLFPLLVAVVLAIALGLLCHRFRAARATVIALSNVLYTIPSLALFAIIPALIGTKV 83
Query 78 LDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELPLSIPVL 137
LD NV+ AL YTTALLVR V +ALDAVP V AATA+G+ + + VELPL++PVL
Sbjct 84 LDSVNVVAALTLYTTALLVRPVADALDAVPGHVTAAATAMGFRPVRRFFAVELPLAVPVL 143
Query 138 VAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAIVVDVVI 197
AG+RV +V+NI++VSVG++IG GGLG FT G++ I+ GVV +LA+VVD+++
Sbjct 144 AAGVRVGSVSNISLVSVGALIGTGGLGVLFTDGFRQRYLAPIIVGVVLTLVLALVVDLLL 203
Query 198 NLAGRLATPWER 209
++ TPW
Sbjct 204 VALRKVLTPWAE 215
>gi|327334987|gb|EGE76698.1| proline/glycine betaine ABC transporter, permease protein [Propionibacterium
acnes HL097PA1]
Length=215
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/199 (48%), Positives = 132/199 (67%), Gaps = 0/199 (0%)
Query 12 WALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPL 71
W LT H L + PVL+ L+ +VPLG RA RR+ ASV++ +PSL LFV+LPL
Sbjct 14 WQLTSHHAVLGVTPVLLSLLLSVPLGWWAHRARTARRILVPGASVLYALPSLPLFVLLPL 73
Query 72 IIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELP 131
I+GT+ILD NV+VAL Y+ ALLVR +A D+V V A AIG+S +V LP
Sbjct 74 ILGTKILDPINVVVALTLYSIALLVRTATDAFDSVGRSVRRDAVAIGHSDSQVFWRVALP 133
Query 132 LSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAI 191
L++P LVAG+RVV+ + +++VSVG+++G+ LG +FT GYQ + +I G++ +LAI
Sbjct 134 LAVPALVAGMRVVSASTLSLVSVGALVGVPSLGYFFTDGYQRSFPTEIWVGIIGTLVLAI 193
Query 192 VVDVVINLAGRLATPWERA 210
+ D+VI GRL TPW RA
Sbjct 194 IFDLVIVCVGRLLTPWRRA 212
>gi|226361729|ref|YP_002779507.1| ABC transporter permease protein [Rhodococcus opacus B4]
gi|226240214|dbj|BAH50562.1| putative ABC transporter permease protein [Rhodococcus opacus
B4]
Length=216
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/190 (48%), Positives = 136/190 (72%), Gaps = 0/190 (0%)
Query 18 HLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPLIIGTRI 77
H+ LSL+P+++G++ A+P+G L R + TA +++TIPSLALFV+LP I+GT+I
Sbjct 20 HILLSLVPIVVGVIIALPIGWLAHRNRRINPYVVGTAGLLYTIPSLALFVLLPPILGTKI 79
Query 78 LDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELPLSIPVL 137
LD N+IVAL YT A+LVR V +ALD+VP + AATA+GY +LKV+LP+ +PV+
Sbjct 80 LDPMNIIVALTIYTVAMLVRVVADALDSVPQETVLAATAMGYRPYQTLLKVQLPVGVPVI 139
Query 138 VAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAIVVDVVI 197
AGLRV V+N+++VS+ +++GI +G+ FT G+Q I+AG+ LLA+V+D++I
Sbjct 140 CAGLRVAVVSNVSLVSLAALLGIPQIGSLFTQGFQLRFYTPIIAGIALSLLLALVLDLLI 199
Query 198 NLAGRLATPW 207
LA R+ TPW
Sbjct 200 VLANRILTPW 209
>gi|340774236|gb|EGR96723.1| ABC transporter, permease protein [Propionibacterium acnes SK182B-JCVI]
Length=215
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/199 (47%), Positives = 133/199 (67%), Gaps = 0/199 (0%)
Query 12 WALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPL 71
W LT H L + PVL+ L+ +VPLG R+ RR+ +AS++F +PSL LFV+LPL
Sbjct 14 WQLTSHHAMLGVTPVLVSLLLSVPLGWWAHRSRTARRILVPSASILFALPSLPLFVLLPL 73
Query 72 IIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELP 131
I+GT+ILD NV+VAL Y ALLVR +A D+V V A A+G+S+ +V LP
Sbjct 74 ILGTKILDPINVVVALTLYGIALLVRTATDAFDSVGRAVRREAVAMGHSKSQVFWRVALP 133
Query 132 LSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAI 191
L++P LVAG+RVV+ + +++VSVG+++G+ LG +FT GYQ + +I G++ +LAI
Sbjct 134 LAVPALVAGMRVVSASTLSLVSVGALVGVPSLGYFFTDGYQRSFPTEIWVGIIGTLVLAI 193
Query 192 VVDVVINLAGRLATPWERA 210
V D+VI GRL TPW+ A
Sbjct 194 VFDLVIVCVGRLLTPWQTA 212
>gi|111019581|ref|YP_702553.1| ABC quaternary amine transporter permease [Rhodococcus jostii
RHA1]
gi|110819111|gb|ABG94395.1| ABC quaternary amine transporter, permease component [Rhodococcus
jostii RHA1]
Length=216
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/190 (48%), Positives = 136/190 (72%), Gaps = 0/190 (0%)
Query 18 HLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPLIIGTRI 77
H+ LSL+P+++G++ A+P+G L R+ + TA +++TIPSLALFV+LP I+GT+I
Sbjct 20 HILLSLVPLVVGVIVALPIGWLAHRSRRINPYVVGTAGLLYTIPSLALFVLLPPILGTKI 79
Query 78 LDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELPLSIPVL 137
LD N++VAL YT ALLVR + +ALD+VP + AATA+GY +LKV+LP+ +PV+
Sbjct 80 LDPMNIVVALTIYTVALLVRVIADALDSVPQETVLAATAMGYRPYQTLLKVQLPVGVPVI 139
Query 138 VAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAIVVDVVI 197
AGLRV V+N+++VS+ +++GI +G+ FT G+Q I+ G+ LLA+V+D++I
Sbjct 140 CAGLRVAVVSNVSLVSLAALLGIPQIGSLFTQGFQLRFYTPIITGIALCLLLALVLDLLI 199
Query 198 NLAGRLATPW 207
LA RL TPW
Sbjct 200 VLANRLLTPW 209
>gi|326329327|ref|ZP_08195652.1| proline/glycine betaine ABC transporter, permease protein [Nocardioidaceae
bacterium Broad-1]
gi|325952902|gb|EGD44917.1| proline/glycine betaine ABC transporter, permease protein [Nocardioidaceae
bacterium Broad-1]
Length=218
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/209 (47%), Positives = 136/209 (66%), Gaps = 1/209 (0%)
Query 3 YLMTHPGAAWALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPS 62
YL T+ G V H+ L+LLPV I + ++PLG LV R +R + T SV++TIPS
Sbjct 7 YLETNIGDILTALVQHIWLALLPVAIAFVLSLPLGALVHRYAPVRHIALTTGSVVYTIPS 66
Query 63 LALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRI 122
LAL ++LP ++GT +LD NV+VAL Y+ ALLVR + LDAV + V AATA+GY +
Sbjct 67 LALLLLLPGVLGTSVLDPLNVVVALTLYSLALLVRTTADGLDAVDSTVLQAATAMGYRPL 126
Query 123 AQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKS-DQIVA 181
+ V+LPL++PV++ GLRV V N++MVS+ +++GIGGLG FT G+Q I+
Sbjct 127 RRWFAVQLPLAMPVILTGLRVATVANVSMVSIAALVGIGGLGQLFTRGFQLGFYLPPIII 186
Query 182 GVVAMFLLAIVVDVVINLAGRLATPWERA 210
G+V +LA+V DV+I R TPW RA
Sbjct 187 GLVLSVMLAVVADVLIVAVQRGLTPWSRA 215
>gi|282853470|ref|ZP_06262807.1| ABC transporter, permease protein [Propionibacterium acnes J139]
gi|282582923|gb|EFB88303.1| ABC transporter, permease protein [Propionibacterium acnes J139]
gi|314922213|gb|EFS86044.1| ABC transporter, permease protein [Propionibacterium acnes HL001PA1]
6 more sequence titles
Length=215
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/199 (48%), Positives = 131/199 (66%), Gaps = 0/199 (0%)
Query 12 WALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPL 71
W LT H L + PVL+ L+ +VPLG RA RR+ AS+++ +PSL LFVVLPL
Sbjct 14 WQLTSHHALLGVTPVLLSLLLSVPLGWWAHRARTARRILVPGASILYALPSLPLFVVLPL 73
Query 72 IIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELP 131
I+GT+ILD NV+VAL Y ALLVR +A D+V V A AIG+S +V LP
Sbjct 74 ILGTKILDPINVVVALTLYGIALLVRTATDAFDSVGRSVRRDAVAIGHSDSQVFWRVALP 133
Query 132 LSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAI 191
L++P LVAG+RVV+ + +++VSVG+++G+ LG +FT GYQ + +I G++ +L I
Sbjct 134 LAVPALVAGMRVVSASTLSLVSVGALVGVPSLGYFFTDGYQRSFPTEIWVGIIGTLVLGI 193
Query 192 VVDVVINLAGRLATPWERA 210
+ D+VI GRL TPW+RA
Sbjct 194 IFDLVIVCVGRLLTPWQRA 212
>gi|313793025|gb|EFS41092.1| ABC transporter, permease protein [Propionibacterium acnes HL110PA1]
Length=215
Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/199 (48%), Positives = 131/199 (66%), Gaps = 0/199 (0%)
Query 12 WALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPL 71
W LT H L + PVL+ L+ +VPLG RA RR+ ASV++ +PSL LFV+LPL
Sbjct 14 WQLTSHHAVLGVTPVLLSLLLSVPLGWWAHRARTARRILVPGASVLYALPSLPLFVLLPL 73
Query 72 IIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELP 131
I+GT+ILD NV+VAL Y ALLVR +A D+V V A AIG+S +V LP
Sbjct 74 ILGTKILDPINVVVALTLYGIALLVRTATDAFDSVGRSVRRNAVAIGHSDSQVFWRVALP 133
Query 132 LSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAI 191
L++P LVAG+RVV+ + +++VSVG+++G+ LG +FT GYQ + +I G++ +LAI
Sbjct 134 LAVPALVAGMRVVSASTLSLVSVGALVGVPSLGYFFTDGYQRSFPTEIWVGIIGTLVLAI 193
Query 192 VVDVVINLAGRLATPWERA 210
+ D+VI GRL TPW RA
Sbjct 194 IFDLVIVCVGRLLTPWRRA 212
>gi|289424233|ref|ZP_06426016.1| ABC transporter, permease protein [Propionibacterium acnes SK187]
gi|289426641|ref|ZP_06428370.1| ABC transporter, permease protein [Propionibacterium acnes J165]
gi|289154930|gb|EFD03612.1| ABC transporter, permease protein [Propionibacterium acnes SK187]
39 more sequence titles
gi|289160136|gb|EFD08311.1| ABC transporter, permease protein [Propionibacterium acnes J165]
gi|313765499|gb|EFS36863.1| ABC transporter, permease protein [Propionibacterium acnes HL013PA1]
gi|313802526|gb|EFS43748.1| ABC transporter, permease protein [Propionibacterium acnes HL110PA2]
gi|313806541|gb|EFS45048.1| ABC transporter, permease protein [Propionibacterium acnes HL087PA2]
gi|313815099|gb|EFS52813.1| ABC transporter, permease protein [Propionibacterium acnes HL059PA1]
gi|313817408|gb|EFS55122.1| ABC transporter, permease protein [Propionibacterium acnes HL046PA2]
gi|313821849|gb|EFS59563.1| ABC transporter, permease protein [Propionibacterium acnes HL036PA1]
gi|313824257|gb|EFS61971.1| ABC transporter, permease protein [Propionibacterium acnes HL036PA2]
gi|313826621|gb|EFS64335.1| ABC transporter, permease protein [Propionibacterium acnes HL063PA1]
gi|314915859|gb|EFS79690.1| ABC transporter, permease protein [Propionibacterium acnes HL005PA4]
gi|314917135|gb|EFS80966.1| ABC transporter, permease protein [Propionibacterium acnes HL050PA1]
gi|314921410|gb|EFS85241.1| ABC transporter, permease protein [Propionibacterium acnes HL050PA3]
gi|314926663|gb|EFS90494.1| ABC transporter, permease protein [Propionibacterium acnes HL036PA3]
gi|314931267|gb|EFS95098.1| ABC transporter, permease protein [Propionibacterium acnes HL067PA1]
gi|314954909|gb|EFS99315.1| ABC transporter, permease protein [Propionibacterium acnes HL027PA1]
gi|314958842|gb|EFT02944.1| ABC transporter, permease protein [Propionibacterium acnes HL002PA1]
gi|314961133|gb|EFT05234.1| ABC transporter, permease protein [Propionibacterium acnes HL002PA2]
gi|314964441|gb|EFT08541.1| ABC transporter, permease protein [Propionibacterium acnes HL082PA1]
gi|314969539|gb|EFT13637.1| ABC transporter, permease protein [Propionibacterium acnes HL037PA1]
gi|314980386|gb|EFT24480.1| ABC transporter, permease protein [Propionibacterium acnes HL072PA2]
gi|314987225|gb|EFT31316.1| ABC transporter, permease protein [Propionibacterium acnes HL005PA2]
gi|314988884|gb|EFT32975.1| ABC transporter, permease protein [Propionibacterium acnes HL005PA3]
gi|315078546|gb|EFT50577.1| ABC transporter, permease protein [Propionibacterium acnes HL053PA2]
gi|315081990|gb|EFT53966.1| ABC transporter, permease protein [Propionibacterium acnes HL078PA1]
gi|315082513|gb|EFT54489.1| ABC transporter, permease protein [Propionibacterium acnes HL027PA2]
gi|315086225|gb|EFT58201.1| ABC transporter, permease protein [Propionibacterium acnes HL002PA3]
gi|315087808|gb|EFT59784.1| ABC transporter, permease protein [Propionibacterium acnes HL072PA1]
gi|315099890|gb|EFT71866.1| ABC transporter, permease protein [Propionibacterium acnes HL059PA2]
gi|315101800|gb|EFT73776.1| ABC transporter, permease protein [Propionibacterium acnes HL046PA1]
gi|315110243|gb|EFT82219.1| ABC transporter, permease protein [Propionibacterium acnes HL030PA2]
gi|327333461|gb|EGE75181.1| proline/glycine betaine ABC transporter, permease protein [Propionibacterium
acnes HL096PA3]
gi|327445516|gb|EGE92170.1| ABC transporter, permease protein [Propionibacterium acnes HL013PA2]
gi|327454677|gb|EGF01332.1| ABC transporter, permease protein [Propionibacterium acnes HL087PA3]
gi|327456751|gb|EGF03406.1| ABC transporter, permease protein [Propionibacterium acnes HL083PA2]
gi|327456978|gb|EGF03633.1| ABC transporter, permease protein [Propionibacterium acnes HL092PA1]
gi|328755733|gb|EGF69349.1| ABC transporter, permease protein [Propionibacterium acnes HL087PA1]
gi|328756513|gb|EGF70129.1| ABC transporter, permease protein [Propionibacterium acnes HL025PA2]
gi|328758759|gb|EGF72375.1| ABC transporter, permease protein [Propionibacterium acnes HL020PA1]
gi|332674803|gb|AEE71619.1| ABC transporter-associated permease [Propionibacterium acnes
266]
Length=215
Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/199 (48%), Positives = 131/199 (66%), Gaps = 0/199 (0%)
Query 12 WALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPL 71
W LT H L + PVL+ L+ +VPLG RA RR+ ASV++ +PSL LFV+LPL
Sbjct 14 WQLTSHHAVLGVTPVLLSLLLSVPLGWWAHRARTARRILVPGASVLYALPSLPLFVLLPL 73
Query 72 IIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELP 131
I+GT+ILD NV+VAL Y ALLVR +A D+V V A AIG+S +V LP
Sbjct 74 ILGTKILDPINVVVALTLYGIALLVRTATDAFDSVGRSVRRDAVAIGHSDSQVFWRVALP 133
Query 132 LSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAI 191
L++P LVAG+RVV+ + +++VSVG+++G+ LG +FT GYQ + +I G++ +LAI
Sbjct 134 LAVPALVAGMRVVSASTLSLVSVGALVGVPSLGYFFTDGYQRSFPTEIWVGIIGTLVLAI 193
Query 192 VVDVVINLAGRLATPWERA 210
+ D+VI GRL TPW RA
Sbjct 194 IFDLVIVCVGRLLTPWRRA 212
>gi|258651639|ref|YP_003200795.1| binding-protein-dependent transporters inner membrane component
[Nakamurella multipartita DSM 44233]
gi|258554864|gb|ACV77806.1| binding-protein-dependent transport systems inner membrane component
[Nakamurella multipartita DSM 44233]
Length=216
Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/160 (53%), Positives = 116/160 (73%), Gaps = 0/160 (0%)
Query 54 ASVIFTIPSLALFVVLPLIIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDA 113
A +++T+PS+ALFVVLP ++GTRILD NV+VAL YT ALLVR V +ALDAVP V +
Sbjct 56 AGLLYTVPSIALFVVLPAVLGTRILDPLNVVVALTLYTVALLVRVVADALDAVPPLVVAS 115
Query 114 ATAIGYSRIAQMLKVELPLSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQT 173
ATA+GY + +L V+LPL+IPV+ AGLRV AV+N+++VSV +++GI LG FT G+Q
Sbjct 116 ATAMGYQPLRSLLTVQLPLAIPVIGAGLRVAAVSNVSLVSVAALLGIPQLGQLFTVGFQL 175
Query 174 NKSDQIVAGVVAMFLLAIVVDVVINLAGRLATPWERAPRA 213
+ I AG+V +LA + D +I + R+ TPW RA +A
Sbjct 176 DFFTPIWAGIVLCLVLAGIFDAIIQILVRITTPWARAVKA 215
>gi|50841888|ref|YP_055115.1| ABC transporter-associated permease [Propionibacterium acnes
KPA171202]
gi|335052571|ref|ZP_08545451.1| ABC transporter, permease protein [Propionibacterium sp. 409-HC1]
gi|335054981|ref|ZP_08547776.1| ABC transporter, permease protein [Propionibacterium sp. 434-HC2]
8 more sequence titles
Length=215
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/199 (48%), Positives = 131/199 (66%), Gaps = 0/199 (0%)
Query 12 WALTVVHLRLSLLPVLIGLMSAVPLGLLVQRAPLLRRLTTATASVIFTIPSLALFVVLPL 71
W LT H L + PVL+ L+ +VPLG RA RR+ ASV++ +PSL LFV+LPL
Sbjct 14 WQLTSHHAVLGVTPVLLSLLLSVPLGWWAHRARTARRILVPGASVLYALPSLPLFVLLPL 73
Query 72 IIGTRILDEANVIVALAAYTTALLVRAVLEALDAVPAQVHDAATAIGYSRIAQMLKVELP 131
I+GT+ILD NV+VAL Y A+LVR +A D+V V A AIG+S +V LP
Sbjct 74 ILGTKILDPINVVVALTLYGIAVLVRTATDAFDSVGRSVRRDAVAIGHSDSQVFWRVALP 133
Query 132 LSIPVLVAGLRVVAVTNIAMVSVGSVIGIGGLGTWFTAGYQTNKSDQIVAGVVAMFLLAI 191
L++P LVAG+RVV+ + +++VSVG+++G+ LG +FT GYQ + +I G++ +LAI
Sbjct 134 LAVPALVAGMRVVSASTLSLVSVGALVGVPSLGYFFTDGYQRSFPTEIWVGIIGTLVLAI 193
Query 192 VVDVVINLAGRLATPWERA 210
+ D+VI GRL TPW RA
Sbjct 194 IFDLVIVCVGRLLTPWRRA 212
Lambda K H
0.327 0.138 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 297403917052
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40