BLAST Search Results


BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3766

Length=229
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|167970927|ref|ZP_02553204.1|  hypothetical protein MtubH3_2392...   468    2e-130
gi|15610902|ref|NP_218283.1|  hypothetical protein Rv3766 [Mycoba...   468    3e-130
gi|253800813|ref|YP_003033814.1|  hypothetical protein TBMG_03811...   468    4e-130
gi|148824971|ref|YP_001289725.1|  hypothetical protein TBFG_13798...   467    5e-130
gi|15843386|ref|NP_338423.1|  hypothetical protein MT3873 [Mycoba...   467    7e-130
gi|323717631|gb|EGB26833.1|  hypothetical protein TMMG_00258 [Myc...   466    1e-129
gi|289445365|ref|ZP_06435109.1|  conserved hypothetical protein [...   464    4e-129
gi|289747606|ref|ZP_06506984.1|  conserved hypothetical protein [...   462    2e-128
gi|339300172|gb|AEJ52282.1|  hypothetical protein CCDC5180_3445 [...   461    3e-128
gi|339296573|gb|AEJ48684.1|  hypothetical protein CCDC5079_3495 [...   418    3e-115
gi|240168532|ref|ZP_04747191.1|  hypothetical protein MkanA1_0441...   414    5e-114
gi|289572013|ref|ZP_06452240.1|  hypothetical protein TBJG_02901 ...   407    8e-112
gi|183983855|ref|YP_001852146.1|  hypothetical protein MMAR_3879 ...   229    3e-58 
gi|339784133|gb|AEK09842.1|  gp30 [Mycobacterium phage Pixie]          168    7e-40 
gi|342239677|gb|AEL19685.1|  gp30 [Mycobacterium phage Larva]          166    2e-39 
gi|109302787|ref|YP_654789.1|  gp34 [Mycobacterium phage 244] >gi...   155    6e-36 
gi|339783167|gb|AEK08884.1|  gp33 [Mycobacterium phage Henry] >gi...   155    6e-36 
gi|29565911|ref|NP_817482.1|  gp32 [Mycobacterium phage Cjw1] >gi...   154    7e-36 
gi|343171242|gb|AEL98050.1|  gp32 [Mycobacterium phage Eureka]         154    7e-36 
gi|194303086|ref|YP_002014501.1|  gp33 [Mycobacterium phage Kosty...   154    7e-36 
gi|255928352|gb|ACU41968.1|  gp34 [Mycobacterium phage Pumpkin] >...   154    8e-36 
gi|194303328|ref|YP_002014353.1|  gp32 [Mycobacterium phage Porky...   154    8e-36 
gi|111025922|ref|YP_708342.1|  hypothetical protein RHA1_ro09141 ...  95.1    7e-18 
gi|111025199|ref|YP_707619.1|  hypothetical protein RHA1_ro08417 ...  92.0    5e-17 
gi|111024914|ref|YP_707334.1|  hypothetical protein RHA1_ro08129 ...  92.0    5e-17 
gi|40787228|gb|AAR90145.1|  hypothetical protein PDK3.004 [Rhodoc...  92.0    5e-17 
gi|296394776|ref|YP_003659660.1|  hypothetical protein Srot_2385 ...  72.0    6e-11 
gi|227833796|ref|YP_002835503.1|  hypothetical protein cauri_1972...  67.8    1e-09 
gi|255324837|ref|ZP_05365949.1|  conserved hypothetical protein [...  65.9    5e-09 
gi|54023510|ref|YP_117752.1|  hypothetical protein nfa15430 [Noca...  63.2    3e-08 
gi|304360974|ref|YP_003857156.1|  gp25 [Mycobacterium phage LeBro...  62.4    5e-08 
gi|339781740|gb|AEK07569.1|  gp25 [Mycobacterium phage UPIE]          62.4    5e-08 
gi|337290769|ref|YP_004629790.1|  hypothetical protein CULC22_011...  60.5    2e-07 
gi|338826876|ref|YP_004678789.1|  hypothetical protein GoPhGTE2_g...  58.5    7e-07 
gi|338827039|ref|YP_004538971.1|  gp27 [Mycobacterium phage Faith...  55.8    5e-06 
gi|145297115|ref|YP_001139935.1|  hypothetical protein cgR_p0020 ...  49.3    5e-04 
gi|54022022|ref|YP_116264.1|  hypothetical protein nfa580 [Nocard...  44.7    0.011 
gi|54026944|ref|YP_121186.1|  hypothetical protein nfa49700 [Noca...  43.9    0.020 
gi|296169737|ref|ZP_06851353.1|  conserved hypothetical protein [...  42.4    0.051 
gi|111024905|ref|YP_707325.1|  hypothetical protein RHA1_ro08120 ...  42.0    0.064 
gi|111025190|ref|YP_707610.1|  hypothetical protein RHA1_ro08408 ...  41.6    0.082 
gi|111025918|ref|YP_708338.1|  hypothetical protein RHA1_ro09137 ...  41.6    0.083 
gi|339296413|gb|AEJ48524.1|  hypothetical protein CCDC5079_3335 [...  40.4    0.20  
gi|326385266|ref|ZP_08206929.1|  hypothetical protein SCNU_20072 ...  40.4    0.22  
gi|294993714|ref|ZP_06799405.1|  hypothetical protein Mtub2_04176...  39.7    0.38  
gi|15610730|ref|NP_218111.1|  hypothetical protein Rv3594 [Mycoba...  39.3    0.40  
gi|340628559|ref|YP_004747011.1|  hypothetical protein MCAN_36061...  39.3    0.40  
gi|306786502|ref|ZP_07424824.1|  hypothetical protein TMCG_01092 ...  39.3    0.41  
gi|111025915|ref|YP_708335.1|  metallopeptidase [Rhodococcus jost...  38.1    1.00  
gi|109521486|ref|YP_655914.1|  gp49 [Mycobacterium phage Wildcat]...  38.1    1.1   


>gi|167970927|ref|ZP_02553204.1| hypothetical protein MtubH3_23920 [Mycobacterium tuberculosis 
H37Ra]
 gi|308232562|ref|ZP_07416463.2| hypothetical protein TMAG_00256 [Mycobacterium tuberculosis SUMu001]
 gi|308369226|ref|ZP_07416995.2| hypothetical protein TMBG_02304 [Mycobacterium tuberculosis SUMu002]
 22 more sequence titles
 gi|308371447|ref|ZP_07425002.2| hypothetical protein TMCG_01270 [Mycobacterium tuberculosis SUMu003]
 gi|308372649|ref|ZP_07429369.2| hypothetical protein TMDG_01502 [Mycobacterium tuberculosis SUMu004]
 gi|308372733|ref|ZP_07429668.2| hypothetical protein TMEG_00261 [Mycobacterium tuberculosis SUMu005]
 gi|308373813|ref|ZP_07433733.2| hypothetical protein TMFG_01998 [Mycobacterium tuberculosis SUMu006]
 gi|308374978|ref|ZP_07442280.2| hypothetical protein TMGG_01309 [Mycobacterium tuberculosis SUMu007]
 gi|308376224|ref|ZP_07438074.2| hypothetical protein TMHG_02833 [Mycobacterium tuberculosis SUMu008]
 gi|308378463|ref|ZP_07482670.2| hypothetical protein TMIG_00117 [Mycobacterium tuberculosis SUMu009]
 gi|308379613|ref|ZP_07486904.2| hypothetical protein TMJG_01018 [Mycobacterium tuberculosis SUMu010]
 gi|308380802|ref|ZP_07491121.2| hypothetical protein TMKG_01009 [Mycobacterium tuberculosis SUMu011]
 gi|308406240|ref|ZP_07495677.2| hypothetical protein TMLG_00255 [Mycobacterium tuberculosis SUMu012]
 gi|308213648|gb|EFO73047.1| hypothetical protein TMAG_00256 [Mycobacterium tuberculosis SUMu001]
 gi|308328381|gb|EFP17232.1| hypothetical protein TMBG_02304 [Mycobacterium tuberculosis SUMu002]
 gi|308328786|gb|EFP17637.1| hypothetical protein TMCG_01270 [Mycobacterium tuberculosis SUMu003]
 gi|308332628|gb|EFP21479.1| hypothetical protein TMDG_01502 [Mycobacterium tuberculosis SUMu004]
 gi|308340119|gb|EFP28970.1| hypothetical protein TMEG_00261 [Mycobacterium tuberculosis SUMu005]
 gi|308344107|gb|EFP32958.1| hypothetical protein TMFG_01998 [Mycobacterium tuberculosis SUMu006]
 gi|308347909|gb|EFP36760.1| hypothetical protein TMGG_01309 [Mycobacterium tuberculosis SUMu007]
 gi|308351777|gb|EFP40628.1| hypothetical protein TMHG_02833 [Mycobacterium tuberculosis SUMu008]
 gi|308352560|gb|EFP41411.1| hypothetical protein TMIG_00117 [Mycobacterium tuberculosis SUMu009]
 gi|308356511|gb|EFP45362.1| hypothetical protein TMJG_01018 [Mycobacterium tuberculosis SUMu010]
 gi|308360459|gb|EFP49310.1| hypothetical protein TMKG_01009 [Mycobacterium tuberculosis SUMu011]
 gi|308364041|gb|EFP52892.1| hypothetical protein TMLG_00255 [Mycobacterium tuberculosis SUMu012]
Length=274

 Score =  468 bits (1205),  Expect = 2e-130, Method: Compositional matrix adjust.
 Identities = 229/229 (100%), Positives = 229/229 (100%), Gaps = 0/229 (0%)

Query  1    MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  60
            MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG
Sbjct  46   MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  105

Query  61   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  120
            SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH
Sbjct  106  SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  165

Query  121  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  180
            QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL
Sbjct  166  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  225

Query  181  TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229
            TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE
Sbjct  226  TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  274


>gi|15610902|ref|NP_218283.1| hypothetical protein Rv3766 [Mycobacterium tuberculosis H37Rv]
 gi|31794936|ref|NP_857429.1| hypothetical protein Mb3792 [Mycobacterium bovis AF2122/97]
 gi|121639680|ref|YP_979904.1| hypothetical protein BCG_3825 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 28 more sequence titles
 gi|148663632|ref|YP_001285155.1| hypothetical protein MRA_3804 [Mycobacterium tuberculosis H37Ra]
 gi|224992176|ref|YP_002646865.1| hypothetical protein JTY_3827 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|254552880|ref|ZP_05143327.1| hypothetical protein Mtube_20946 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289441202|ref|ZP_06430946.1| hypothetical protein TBLG_01945 [Mycobacterium tuberculosis T46]
 gi|289556031|ref|ZP_06445241.1| hypothetical protein TBXG_03781 [Mycobacterium tuberculosis KZN 
605]
 gi|289572416|ref|ZP_06452643.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289748285|ref|ZP_06507663.1| hypothetical protein TBDG_00173 [Mycobacterium tuberculosis T92]
 gi|289755897|ref|ZP_06515275.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289763948|ref|ZP_06523326.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|297636447|ref|ZP_06954227.1| hypothetical protein MtubK4_20075 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297733441|ref|ZP_06962559.1| hypothetical protein MtubKR_20215 [Mycobacterium tuberculosis 
KZN R506]
 gi|313660772|ref|ZP_07817652.1| hypothetical protein MtubKV_20210 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339633760|ref|YP_004725402.1| hypothetical protein MAF_37790 [Mycobacterium africanum GM041182]
 gi|2960190|emb|CAA18088.1| HYPOTHETICAL PROTEIN Rv3766 [Mycobacterium tuberculosis H37Rv]
 gi|31620534|emb|CAD95978.1| HYPOTHETICAL PROTEIN Mb3792 [Mycobacterium bovis AF2122/97]
 gi|121495328|emb|CAL73815.1| Hypothetical protein BCG_3825 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|148507784|gb|ABQ75593.1| hypothetical protein MRA_3804 [Mycobacterium tuberculosis H37Ra]
 gi|224775291|dbj|BAH28097.1| hypothetical protein JTY_3827 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|289414121|gb|EFD11361.1| hypothetical protein TBLG_01945 [Mycobacterium tuberculosis T46]
 gi|289440663|gb|EFD23156.1| hypothetical protein TBXG_03781 [Mycobacterium tuberculosis KZN 
605]
 gi|289536847|gb|EFD41425.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289688872|gb|EFD56301.1| hypothetical protein TBDG_00173 [Mycobacterium tuberculosis T92]
 gi|289696484|gb|EFD63913.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289711454|gb|EFD75470.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|328460540|gb|AEB05963.1| hypothetical protein TBSG_03834 [Mycobacterium tuberculosis KZN 
4207]
 gi|339333116|emb|CCC28848.1| hypothetical protein MAF_37790 [Mycobacterium africanum GM041182]
 gi|341603701|emb|CCC66382.1| hypothetical protein BCGM_3789 [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344221604|gb|AEN02235.1| hypothetical protein MTCTRI2_3840 [Mycobacterium tuberculosis 
CTRI-2]
Length=229

 Score =  468 bits (1205),  Expect = 3e-130, Method: Compositional matrix adjust.
 Identities = 229/229 (100%), Positives = 229/229 (100%), Gaps = 0/229 (0%)

Query  1    MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  60
            MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG
Sbjct  1    MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  60

Query  61   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  120
            SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH
Sbjct  61   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  120

Query  121  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  180
            QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL
Sbjct  121  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  180

Query  181  TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229
            TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE
Sbjct  181  TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229


>gi|253800813|ref|YP_003033814.1| hypothetical protein TBMG_03811 [Mycobacterium tuberculosis KZN 
1435]
 gi|253322316|gb|ACT26919.1| hypothetical protein TBMG_03811 [Mycobacterium tuberculosis KZN 
1435]
Length=259

 Score =  468 bits (1203),  Expect = 4e-130, Method: Compositional matrix adjust.
 Identities = 229/229 (100%), Positives = 229/229 (100%), Gaps = 0/229 (0%)

Query  1    MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  60
            MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG
Sbjct  31   MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  90

Query  61   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  120
            SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH
Sbjct  91   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  150

Query  121  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  180
            QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL
Sbjct  151  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  210

Query  181  TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229
            TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE
Sbjct  211  TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  259


>gi|148824971|ref|YP_001289725.1| hypothetical protein TBFG_13798 [Mycobacterium tuberculosis F11]
 gi|254233258|ref|ZP_04926584.1| hypothetical protein TBCG_03691 [Mycobacterium tuberculosis C]
 gi|254366311|ref|ZP_04982355.1| hypothetical protein TBHG_03702 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|124603051|gb|EAY61326.1| hypothetical protein TBCG_03691 [Mycobacterium tuberculosis C]
 gi|134151823|gb|EBA43868.1| hypothetical protein TBHG_03702 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148723498|gb|ABR08123.1| hypothetical protein TBFG_13798 [Mycobacterium tuberculosis F11]
Length=251

 Score =  467 bits (1202),  Expect = 5e-130, Method: Compositional matrix adjust.
 Identities = 229/229 (100%), Positives = 229/229 (100%), Gaps = 0/229 (0%)

Query  1    MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  60
            MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG
Sbjct  23   MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  82

Query  61   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  120
            SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH
Sbjct  83   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  142

Query  121  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  180
            QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL
Sbjct  143  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  202

Query  181  TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229
            TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE
Sbjct  203  TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  251


>gi|15843386|ref|NP_338423.1| hypothetical protein MT3873 [Mycobacterium tuberculosis CDC1551]
 gi|13883752|gb|AAK48237.1| hypothetical protein MT3873 [Mycobacterium tuberculosis CDC1551]
Length=229

 Score =  467 bits (1201),  Expect = 7e-130, Method: Compositional matrix adjust.
 Identities = 228/229 (99%), Positives = 228/229 (99%), Gaps = 0/229 (0%)

Query  1    MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  60
            MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG
Sbjct  1    MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  60

Query  61   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  120
            SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH
Sbjct  61   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  120

Query  121  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  180
            QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL
Sbjct  121  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  180

Query  181  TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229
            TK REIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE
Sbjct  181  TKAREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229


>gi|323717631|gb|EGB26833.1| hypothetical protein TMMG_00258 [Mycobacterium tuberculosis CDC1551A]
Length=259

 Score =  466 bits (1199),  Expect = 1e-129, Method: Compositional matrix adjust.
 Identities = 228/229 (99%), Positives = 228/229 (99%), Gaps = 0/229 (0%)

Query  1    MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  60
            MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG
Sbjct  31   MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  90

Query  61   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  120
            SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH
Sbjct  91   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  150

Query  121  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  180
            QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL
Sbjct  151  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  210

Query  181  TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229
            TK REIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE
Sbjct  211  TKAREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  259


>gi|289445365|ref|ZP_06435109.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289418323|gb|EFD15524.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=229

 Score =  464 bits (1194),  Expect = 4e-129, Method: Compositional matrix adjust.
 Identities = 228/229 (99%), Positives = 228/229 (99%), Gaps = 0/229 (0%)

Query  1    MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  60
            MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG
Sbjct  1    MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  60

Query  61   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  120
            SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH
Sbjct  61   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  120

Query  121  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  180
            QYTDGSGYSPNLPQGAPPFGR DMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL
Sbjct  121  QYTDGSGYSPNLPQGAPPFGRYDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  180

Query  181  TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229
            TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE
Sbjct  181  TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229


>gi|289747606|ref|ZP_06506984.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289759928|ref|ZP_06519306.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294995322|ref|ZP_06801013.1| hypothetical protein Mtub2_12628 [Mycobacterium tuberculosis 
210]
 gi|298527239|ref|ZP_07014648.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|289688134|gb|EFD55622.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289715492|gb|EFD79504.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298497033|gb|EFI32327.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|326905604|gb|EGE52537.1| hypothetical protein TBPG_03561 [Mycobacterium tuberculosis W-148]
Length=228

 Score =  462 bits (1188),  Expect = 2e-128, Method: Compositional matrix adjust.
 Identities = 228/229 (99%), Positives = 228/229 (99%), Gaps = 1/229 (0%)

Query  1    MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  60
            MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG
Sbjct  1    MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  60

Query  61   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  120
            SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH
Sbjct  61   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  120

Query  121  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  180
            QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL
Sbjct  121  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  180

Query  181  TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229
             KVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE
Sbjct  181  -KVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  228


>gi|339300172|gb|AEJ52282.1| hypothetical protein CCDC5180_3445 [Mycobacterium tuberculosis 
CCDC5180]
Length=258

 Score =  461 bits (1187),  Expect = 3e-128, Method: Compositional matrix adjust.
 Identities = 228/229 (99%), Positives = 228/229 (99%), Gaps = 1/229 (0%)

Query  1    MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  60
            MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG
Sbjct  31   MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  90

Query  61   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  120
            SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH
Sbjct  91   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  150

Query  121  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  180
            QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL
Sbjct  151  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  210

Query  181  TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229
             KVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE
Sbjct  211  -KVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  258


>gi|339296573|gb|AEJ48684.1| hypothetical protein CCDC5079_3495 [Mycobacterium tuberculosis 
CCDC5079]
Length=244

 Score =  418 bits (1075),  Expect = 3e-115, Method: Compositional matrix adjust.
 Identities = 205/208 (99%), Positives = 206/208 (99%), Gaps = 1/208 (0%)

Query  1    MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  60
            MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG
Sbjct  31   MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  90

Query  61   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  120
            SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH
Sbjct  91   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  150

Query  121  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  180
            QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL
Sbjct  151  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  210

Query  181  TKVREIWDQLRGPNGAGWPQLGQNEQGQ  208
             KVREIWDQLRGPNGAGWPQLGQNEQ +
Sbjct  211  -KVREIWDQLRGPNGAGWPQLGQNEQAR  237


>gi|240168532|ref|ZP_04747191.1| hypothetical protein MkanA1_04417 [Mycobacterium kansasii ATCC 
12478]
Length=229

 Score =  414 bits (1064),  Expect = 5e-114, Method: Compositional matrix adjust.
 Identities = 200/228 (88%), Positives = 212/228 (93%), Gaps = 0/228 (0%)

Query  1    MRSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGDG  60
            MR A DSGR+TFGIVYTY RPNW ANANTVR+MIDAAGGLH RVALMLDVESGGNPPGDG
Sbjct  1    MRGALDSGRMTFGIVYTYVRPNWLANANTVRAMIDAAGGLHRRVALMLDVESGGNPPGDG  60

Query  61   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  120
            S+WIN+LYWNLADYAGSP RIIGYANAYDF+NMWRVRP GLRVI AGYGSNP+LPGQVAH
Sbjct  61   SAWINQLYWNLADYAGSPRRIIGYANAYDFWNMWRVRPPGLRVIAAGYGSNPHLPGQVAH  120

Query  121  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELL  180
            QYTDGSGYSPNLPQG PPFGRCDMNSA+GLTP+QFAAACG+T  GGPLMALTDEEQ ELL
Sbjct  121  QYTDGSGYSPNLPQGCPPFGRCDMNSADGLTPRQFAAACGITVNGGPLMALTDEEQAELL  180

Query  181  TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLA  228
            TKVREIWDQLRGPNGAGWPQLGQN QGQ+LTPVDAIA IK+D+  MLA
Sbjct  181  TKVREIWDQLRGPNGAGWPQLGQNSQGQNLTPVDAIAAIKDDMEGMLA  228


>gi|289572013|ref|ZP_06452240.1| hypothetical protein TBJG_02901 [Mycobacterium tuberculosis T17]
 gi|289545767|gb|EFD49415.1| hypothetical protein TBJG_02901 [Mycobacterium tuberculosis T17]
Length=200

 Score =  407 bits (1045),  Expect = 8e-112, Method: Compositional matrix adjust.
 Identities = 199/200 (99%), Positives = 200/200 (100%), Gaps = 0/200 (0%)

Query  30   VRSMIDAAGGLHPRVALMLDVESGGNPPGDGSSWINRLYWNLADYAGSPVRIIGYANAYD  89
            +RSMIDAAGGLHPRVALMLDVESGGNPPGDGSSWINRLYWNLADYAGSPVRIIGYANAYD
Sbjct  1    MRSMIDAAGGLHPRVALMLDVESGGNPPGDGSSWINRLYWNLADYAGSPVRIIGYANAYD  60

Query  90   FFNMWRVRPAGLRVIGAGYGSNPNLPGQVAHQYTDGSGYSPNLPQGAPPFGRCDMNSANG  149
            FFNMWRVRPAGLRVIGAGYGSNPNLPGQVAHQYTDGSGYSPNLPQGAPPFGRCDMNSANG
Sbjct  61   FFNMWRVRPAGLRVIGAGYGSNPNLPGQVAHQYTDGSGYSPNLPQGAPPFGRCDMNSANG  120

Query  150  LTPQQFAAACGVTTTGGPLMALTDEEQTELLTKVREIWDQLRGPNGAGWPQLGQNEQGQD  209
            LTPQQFAAACGVTTTGGPLMALTDEEQTELLTKVREIWDQLRGPNGAGWPQLGQNEQGQD
Sbjct  121  LTPQQFAAACGVTTTGGPLMALTDEEQTELLTKVREIWDQLRGPNGAGWPQLGQNEQGQD  180

Query  210  LTPVDAIAVIKNDVAAMLAE  229
            LTPVDAIAVIKNDVAAMLAE
Sbjct  181  LTPVDAIAVIKNDVAAMLAE  200


>gi|183983855|ref|YP_001852146.1| hypothetical protein MMAR_3879 [Mycobacterium marinum M]
 gi|183177181|gb|ACC42291.1| conserved hypothetical bacteriophage protein [Mycobacterium marinum 
M]
Length=407

 Score =  229 bits (583),  Expect = 3e-58, Method: Compositional matrix adjust.
 Identities = 110/163 (68%), Positives = 126/163 (78%), Gaps = 1/163 (0%)

Query  1    MRSAFDSGRLTFGIVYTYARPN-WWANANTVRSMIDAAGGLHPRVALMLDVESGGNPPGD  59
            MR+A +SG+LTFGIVYTY RP  W +NA TV+ MIDAAGGLHPR+ALMLD+ESGGNPPGD
Sbjct  182  MRAALNSGKLTFGIVYTYVRPQTWQSNAATVKQMIDAAGGLHPRIALMLDIESGGNPPGD  241

Query  60   GSSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVA  119
             S  IN +Y  LADY G P RIIGY N  D   MWR +P G+R+I AGYG  P  PG VA
Sbjct  242  QSGGINAIYSALADYTGDPARIIGYGNVSDLNGMWRTKPPGIRLIVAGYGRLPTYPGMVA  301

Query  120  HQYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVT  162
            HQYTDG GY   LP+G PPFG CDMN+ANGLTP +FAAACG++
Sbjct  302  HQYTDGQGYGGGLPEGCPPFGNCDMNAANGLTPAEFAAACGIS  344


>gi|339784133|gb|AEK09842.1| gp30 [Mycobacterium phage Pixie]
Length=561

 Score =  168 bits (425),  Expect = 7e-40, Method: Compositional matrix adjust.
 Identities = 94/186 (51%), Positives = 123/186 (67%), Gaps = 6/186 (3%)

Query  2    RSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVES-GGNPPGDG  60
            ++A D GRL F +VY   RPNW A  +T++S +   G  HPR+A+M+DVES GG   GD 
Sbjct  215  KAAADDGRLAFFLVYFVWRPNWQAAVDTLKSQV---GVPHPRMAVMIDVESWGGQITGDQ  271

Query  61   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  120
            S  IN  +  +A++ G   R+IGY N  D  N+W  +P GLR++ A YGSNP  PG++AH
Sbjct  272  SDGINAAHAQIAEWLGDARRVIGYGNTGDLNNLWPRKPDGLRLVLAAYGSNPGYPGKIAH  331

Query  121  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTT--GGPLMALTDEEQTE  178
            QYT+G G+   LP+GAPPFG CDMNSA+G T   FAAA G+ T    G L ALT +EQ E
Sbjct  332  QYTNGGGFGGGLPEGAPPFGNCDMNSADGYTATAFAAALGIETNQEDGLLSALTPDEQRE  391

Query  179  LLTKVR  184
            +LT +R
Sbjct  392  VLTLLR  397


>gi|342239677|gb|AEL19685.1| gp30 [Mycobacterium phage Larva]
Length=544

 Score =  166 bits (421),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 91/188 (49%), Positives = 120/188 (64%), Gaps = 8/188 (4%)

Query  2    RSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVES-GGNPPGDG  60
            + A D GRL F IVY   RPNW A  +T+++ +   G  HP++A+MLDVES  G   GD 
Sbjct  215  KRAVDDGRLAFFIVYFVWRPNWQAAVDTLKAQV---GDPHPKMAVMLDVESWNGQISGDQ  271

Query  61   SSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAH  120
            S+ IN  +  +A + G   R+IGY N  D   +W  +P G+R++ AGYG  P  PG +AH
Sbjct  272  SAGINAAFEQIAGWLGDRRRVIGYGNTGDLNALWPRKPEGVRLVVAGYGKLPTYPGMIAH  331

Query  121  QYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGV--TTTGGP--LMALTDEEQ  176
            QYTDG GY   LP+GAPPFGRCDMN+ANGLT   FA A G+  +TTG    + AL+ +EQ
Sbjct  332  QYTDGQGYGGGLPEGAPPFGRCDMNAANGLTASAFARALGIEPSTTGEDDFMSALSADEQ  391

Query  177  TELLTKVR  184
             E+L  +R
Sbjct  392  REMLAYLR  399


>gi|109302787|ref|YP_654789.1| gp34 [Mycobacterium phage 244]
 gi|88910078|gb|ABD58009.1| gp34 [Mycobacterium phage 244]
Length=500

 Score =  155 bits (391),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 82/188 (44%), Positives = 120/188 (64%), Gaps = 14/188 (7%)

Query  6    DSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVES-GGNPPGDGSSWI  64
            DSG+L F +VY   RPNW    + VR++ +  G  HP++A+MLD+ES GG   G+ S+ I
Sbjct  223  DSGKLKFFMVYFVWRPNW---QDAVRTLKEQIGTPHPKMAIMLDIESWGGQIRGNQSAGI  279

Query  65   NRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAHQYTD  124
            N  + ++A + G   R+ GY N  D  ++W  +P G+R++ A YGSNP+ PG++AHQYT+
Sbjct  280  NAAFEDIAAWLGDRRRVFGYGNVGDLNSIWPQKPEGIRLVVAAYGSNPSYPGKIAHQYTN  339

Query  125  GSGYSPN--LPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELLTK  182
            G GY     LP GA PFG+CDMNSA+GLT  QFAAA G++        +T EE  ++   
Sbjct  340  GEGYGARDGLPDGAAPFGKCDMNSADGLTATQFAAALGIS--------VTTEEDDDMAKV  391

Query  183  VREIWDQL  190
             ++ WD++
Sbjct  392  PQDQWDRV  399


>gi|339783167|gb|AEK08884.1| gp33 [Mycobacterium phage Henry]
 gi|339784389|gb|AEK10096.1| gp31 [Mycobacterium phage SirDuracell]
Length=500

 Score =  155 bits (391),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 82/188 (44%), Positives = 120/188 (64%), Gaps = 14/188 (7%)

Query  6    DSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVES-GGNPPGDGSSWI  64
            DSG+L F +VY   RPNW    + VR++ +  G  HP++A+MLD+ES GG   G+ S+ I
Sbjct  223  DSGKLKFFMVYFVWRPNW---QDAVRTLKEQIGTPHPKMAIMLDIESWGGQIRGNQSAGI  279

Query  65   NRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAHQYTD  124
            N  + ++A + G   R+ GY N  D  ++W  +P G+R++ A YGSNP+ PG++AHQYT+
Sbjct  280  NAAFEDIAAWLGDRRRVFGYGNVGDLNSIWPQKPEGIRLVVAAYGSNPSYPGKIAHQYTN  339

Query  125  GSGYSPN--LPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELLTK  182
            G GY     LP GA PFG+CDMNSA+GLT  QFAAA G++        +T EE  ++   
Sbjct  340  GEGYGARDGLPDGAAPFGKCDMNSADGLTATQFAAALGIS--------VTTEEDDDMAKV  391

Query  183  VREIWDQL  190
             ++ WD++
Sbjct  392  PQDQWDRV  399


>gi|29565911|ref|NP_817482.1| gp32 [Mycobacterium phage Cjw1]
 gi|29424636|gb|AAN01647.1| gp32 [Mycobacterium phage Cjw1]
 gi|339752538|gb|AEJ92570.1| gp33 [Mycobacterium phage Rakim]
 gi|342315321|gb|AEL21651.1| gp34 [Mycobacterium phage Lilac]
 gi|342315461|gb|AEL21790.1| gp33 [Mycobacterium phage Elph10]
Length=500

 Score =  154 bits (390),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 82/188 (44%), Positives = 120/188 (64%), Gaps = 14/188 (7%)

Query  6    DSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVES-GGNPPGDGSSWI  64
            DSG+L F +VY   RPNW    + VR++ +  G  HP++A+MLD+ES GG   G+ S+ I
Sbjct  223  DSGKLKFFMVYFVWRPNW---QDAVRTLKEQIGTPHPKMAIMLDIESWGGQIRGNQSAGI  279

Query  65   NRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAHQYTD  124
            N  + ++A + G   R+ GY N  D  ++W  +P G+R++ A YGSNP+ PG++AHQYT+
Sbjct  280  NAAFEDIAAWLGDRRRVFGYGNVGDLNSIWPQKPEGIRLVVAAYGSNPSYPGKIAHQYTN  339

Query  125  GSGYSPN--LPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELLTK  182
            G GY     LP GA PFG+CDMNSA+GLT  QFAAA G++        +T EE  ++   
Sbjct  340  GEGYGARDGLPDGAAPFGKCDMNSADGLTATQFAAALGIS--------VTTEEDDDMAKV  391

Query  183  VREIWDQL  190
             ++ WD++
Sbjct  392  PQDQWDRV  399


>gi|343171242|gb|AEL98050.1| gp32 [Mycobacterium phage Eureka]
Length=500

 Score =  154 bits (390),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 82/188 (44%), Positives = 120/188 (64%), Gaps = 14/188 (7%)

Query  6    DSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVES-GGNPPGDGSSWI  64
            DSG+L F +VY   RPNW    + VR++ +  G  HP++A+MLD+ES GG   G+ S+ I
Sbjct  223  DSGKLKFFMVYFVWRPNW---QDAVRTLKEQIGTPHPKMAIMLDIESWGGQIRGNQSAGI  279

Query  65   NRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAHQYTD  124
            N  + ++A + G   R+ GY N  D  ++W  +P G+R++ A YGSNP+ PG++AHQYT+
Sbjct  280  NAAFEDIAAWLGDRRRVFGYGNVGDLNSIWPQKPEGIRLVVAAYGSNPSYPGKIAHQYTN  339

Query  125  GSGYSPN--LPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELLTK  182
            G GY     LP GA PFG+CDMNSA+GLT  QFAAA G++        +T EE  ++   
Sbjct  340  GEGYGARDGLPDGAAPFGKCDMNSADGLTATQFAAALGIS--------VTTEEDDDMAKV  391

Query  183  VREIWDQL  190
             ++ WD++
Sbjct  392  PQDQWDRV  399


>gi|194303086|ref|YP_002014501.1| gp33 [Mycobacterium phage Kostya]
 gi|194153134|gb|ACF34200.1| gp33 [Mycobacterium phage Kostya]
 gi|339752396|gb|AEJ92429.1| gp32 [Mycobacterium phage Toto]
Length=477

 Score =  154 bits (390),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 82/188 (44%), Positives = 120/188 (64%), Gaps = 14/188 (7%)

Query  6    DSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVES-GGNPPGDGSSWI  64
            DSG+L F +VY   RPNW    + VR++ +  G  HP++A+MLD+ES GG   G+ S+ I
Sbjct  200  DSGKLKFFMVYFVWRPNW---QDAVRTLKEQIGTPHPKMAIMLDIESWGGQIRGNQSAGI  256

Query  65   NRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAHQYTD  124
            N  + ++A + G   R+ GY N  D  ++W  +P G+R++ A YGSNP+ PG++AHQYT+
Sbjct  257  NAAFEDIAAWLGDRRRVFGYGNVGDLNSIWPQKPEGIRLVVAAYGSNPSYPGKIAHQYTN  316

Query  125  GSGYSPN--LPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELLTK  182
            G GY     LP GA PFG+CDMNSA+GLT  QFAAA G++        +T EE  ++   
Sbjct  317  GEGYGARDGLPDGAAPFGKCDMNSADGLTATQFAAALGIS--------VTTEEDDDMAKV  368

Query  183  VREIWDQL  190
             ++ WD++
Sbjct  369  PQDQWDRV  376


>gi|255928352|gb|ACU41968.1| gp34 [Mycobacterium phage Pumpkin]
 gi|339782609|gb|AEK08331.1| gp32 [Mycobacterium phage Bask21]
Length=500

 Score =  154 bits (390),  Expect = 8e-36, Method: Compositional matrix adjust.
 Identities = 82/188 (44%), Positives = 119/188 (64%), Gaps = 14/188 (7%)

Query  6    DSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVES-GGNPPGDGSSWI  64
            DSG+L F +VY   RPNW    + VR++ +  G  HP++A+MLD+ES GG   G+ S+ I
Sbjct  223  DSGKLKFFMVYFVWRPNW---QDAVRTLKEQIGTPHPKMAIMLDIESWGGQIRGNQSAGI  279

Query  65   NRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAHQYTD  124
            N  + ++A + G   R+ GY N  D   +W  +P G+R++ A YGSNP+ PG++AHQYT+
Sbjct  280  NAAFEDIAAWLGDRRRVFGYGNVGDLNTIWPQKPEGIRLVVAAYGSNPSYPGKIAHQYTN  339

Query  125  GSGYSPN--LPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELLTK  182
            G GY     LP GA PFG+CDMNSA+GLT  QFAAA G++        +T EE  ++   
Sbjct  340  GEGYGARDGLPDGAAPFGKCDMNSADGLTATQFAAALGIS--------VTTEEDDDMAKV  391

Query  183  VREIWDQL  190
             ++ WD++
Sbjct  392  PQDQWDRV  399


>gi|194303328|ref|YP_002014353.1| gp32 [Mycobacterium phage Porky]
 gi|194150813|gb|ACF33849.1| gp32 [Mycobacterium phage Porky]
Length=500

 Score =  154 bits (390),  Expect = 8e-36, Method: Compositional matrix adjust.
 Identities = 82/188 (44%), Positives = 119/188 (64%), Gaps = 14/188 (7%)

Query  6    DSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVES-GGNPPGDGSSWI  64
            DSG+L F +VY   RPNW    + VR++ +  G  HP++A+MLD+ES GG   G+ S+ I
Sbjct  223  DSGKLKFFMVYFVWRPNW---QDAVRTLKEQIGTPHPKMAIMLDIESWGGQIRGNQSAGI  279

Query  65   NRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLPGQVAHQYTD  124
            N  + ++A + G   R+ GY N  D   +W  +P G+R++ A YGSNP+ PG++AHQYT+
Sbjct  280  NAAFEDIAAWLGDRRRVFGYGNVGDLNTIWPQKPEGIRLVVAAYGSNPSYPGKIAHQYTN  339

Query  125  GSGYSPN--LPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELLTK  182
            G GY     LP GA PFG+CDMNSA+GLT  QFAAA G++        +T EE  ++   
Sbjct  340  GEGYGARDGLPDGAAPFGKCDMNSADGLTATQFAAALGIS--------VTTEEDDDMAKV  391

Query  183  VREIWDQL  190
             ++ WD++
Sbjct  392  PQDQWDRV  399


>gi|111025922|ref|YP_708342.1| hypothetical protein RHA1_ro09141 [Rhodococcus jostii RHA1]
 gi|110824901|gb|ABH00184.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=688

 Score = 95.1 bits (235),  Expect = 7e-18, Method: Compositional matrix adjust.
 Identities = 65/164 (40%), Positives = 86/164 (53%), Gaps = 17/164 (10%)

Query  4    AFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVE-SGGNPPGDGSS  62
            A D GRL F IVY + RP   AN + +  M+   GG HPR+ +M DVE + G   GD S+
Sbjct  502  ACDDGRLRFFIVYWFFRPGQ-ANIDLLMQMVTEQGGPHPRMVVMADVEDAAGTITGDQSA  560

Query  63   WINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLP-----GQ  117
             +N       ++ G   R+IGY N     ++WR RP GLR++   YG  P  P     G 
Sbjct  561  EVNDEIRRAREWLGE-RRVIGYWNPVSNADLWRTRPPGLRLVTPSYGREPGSPKIKPDGY  619

Query  118  VAHQYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGV  161
             AHQYTD      N P   PPFGRCD+N  + L+  +  A  G+
Sbjct  620  FAHQYTD------NGP--CPPFGRCDLNYTH-LSTDELDAMLGL  654


>gi|111025199|ref|YP_707619.1| hypothetical protein RHA1_ro08417 [Rhodococcus jostii RHA1]
 gi|110824178|gb|ABG99461.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=505

 Score = 92.0 bits (227),  Expect = 5e-17, Method: Compositional matrix adjust.
 Identities = 64/164 (40%), Positives = 85/164 (52%), Gaps = 17/164 (10%)

Query  4    AFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVE-SGGNPPGDGSS  62
            A   GRL F IVY + RP   AN + +  M+   GG HPR+ +M DVE + G   GD S+
Sbjct  323  ACQDGRLRFFIVYWFFRPGQ-ANIDLLMQMVTEQGGPHPRMVVMADVEDAAGAITGDQSA  381

Query  63   WINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLP-----GQ  117
             +N       ++ G   R+IGY N     ++WR RP GLR++   YG  P  P     G 
Sbjct  382  EVNDEIRRAREWLGE-RRVIGYWNPVSNADLWRTRPPGLRLVTPSYGREPGSPKIKPDGY  440

Query  118  VAHQYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGV  161
             AHQYTD      N P   PPFGRCD+N  + L+  +  A  G+
Sbjct  441  FAHQYTD------NGP--CPPFGRCDLNYTH-LSTDELDAMLGL  475


>gi|111024914|ref|YP_707334.1| hypothetical protein RHA1_ro08129 [Rhodococcus jostii RHA1]
 gi|110823893|gb|ABG99176.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=509

 Score = 92.0 bits (227),  Expect = 5e-17, Method: Compositional matrix adjust.
 Identities = 64/164 (40%), Positives = 85/164 (52%), Gaps = 17/164 (10%)

Query  4    AFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVE-SGGNPPGDGSS  62
            A   GRL F IVY + RP   AN + +  M+   GG HPR+ +M DVE + G   GD S+
Sbjct  323  ACQDGRLRFFIVYWFFRPGQ-ANIDLLMQMVTEQGGPHPRMVVMADVEDAAGAITGDQSA  381

Query  63   WINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLP-----GQ  117
             +N       ++ G   R+IGY N     ++WR RP GLR++   YG  P  P     G 
Sbjct  382  EVNDEIRRAREWLGE-RRVIGYWNPVSNADLWRTRPPGLRLVTPSYGREPGSPKIKPDGY  440

Query  118  VAHQYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGV  161
             AHQYTD      N P   PPFGRCD+N  + L+  +  A  G+
Sbjct  441  FAHQYTD------NGP--CPPFGRCDLNYTH-LSTDELDAMLGL  475


>gi|40787228|gb|AAR90145.1| hypothetical protein PDK3.004 [Rhodococcus sp. DK17]
Length=507

 Score = 92.0 bits (227),  Expect = 5e-17, Method: Compositional matrix adjust.
 Identities = 64/164 (40%), Positives = 85/164 (52%), Gaps = 17/164 (10%)

Query  4    AFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGLHPRVALMLDVE-SGGNPPGDGSS  62
            A   GRL F IVY + RP   AN + +  M+   GG HPR+ +M DVE + G   GD S+
Sbjct  323  ACQDGRLRFFIVYWFFRPGQ-ANIDLLMQMVTEQGGPHPRMVVMADVEDAAGAITGDQSA  381

Query  63   WINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLP-----GQ  117
             +N       ++ G   R+IGY N     ++WR RP GLR++   YG  P  P     G 
Sbjct  382  EVNDEIRRAREWLGE-RRVIGYWNPVSNADLWRTRPPGLRLVTPSYGREPGSPKIKPDGY  440

Query  118  VAHQYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGV  161
             AHQYTD      N P   PPFGRCD+N  + L+  +  A  G+
Sbjct  441  FAHQYTD------NGP--CPPFGRCDLNYTH-LSTDELDAMLGL  475


>gi|296394776|ref|YP_003659660.1| hypothetical protein Srot_2385 [Segniliparus rotundus DSM 44985]
 gi|296181923|gb|ADG98829.1| hypothetical protein Srot_2385 [Segniliparus rotundus DSM 44985]
Length=197

 Score = 72.0 bits (175),  Expect = 6e-11, Method: Compositional matrix adjust.
 Identities = 56/179 (32%), Positives = 77/179 (44%), Gaps = 9/179 (5%)

Query  43   RVALMLDVE-SGGNPPGDGSSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGL  101
            R+  M+DVE  GG   GD S  +N     L  + G P R+IGY N      +W  RP GL
Sbjct  6    RLVTMVDVEGDGGRVRGDQSLEVNDEVARLRQWHGDPRRVIGYWNPTADPGLWPSRPEGL  65

Query  102  RVIGAGYGSNPNLPGQVAHQYTDGSGYSPNLPQG-APPFGRCDMNSANGLTPQQFAAACG  160
            R++   Y   P    +V   Y   +    +   G   PFG CD+N +    P+       
Sbjct  66   RLVIPRYNQRPGDLSEVPEPYRSEAIAHQHTSSGQCAPFGACDLNQSLVPLPELLDTLGI  125

Query  161  VTTTGGPLMALTDEEQTELLTKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVI  219
             TT   P+ A+TD E       +    DQ+   +G  WPQ G        T +DA+A I
Sbjct  126  PTTKEAPVPAMTDNELNRRFDNIDAKLDQILAQHGP-WPQTGNR------TLLDAVAAI  177


>gi|227833796|ref|YP_002835503.1| hypothetical protein cauri_1972 [Corynebacterium aurimucosum 
ATCC 700975]
 gi|262184734|ref|ZP_06044155.1| hypothetical protein CaurA7_12124 [Corynebacterium aurimucosum 
ATCC 700975]
 gi|227454812|gb|ACP33565.1| hypothetical protein cauri_1972 [Corynebacterium aurimucosum 
ATCC 700975]
Length=272

 Score = 67.8 bits (164),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 38/92 (42%), Positives = 53/92 (58%), Gaps = 18/92 (19%)

Query  151  TPQQFAAACGVTTTGGPLMALTDEEQTELLTK-------------VREIWDQLRGPNGAG  197
            TP+Q A       TGG  + +   EQ    T+             ++EIW QLRGP+G G
Sbjct  177  TPKQPA-----KNTGGSSVTMNAVEQVNAHTRAFISGFFTPQFDAIQEIWRQLRGPSGKG  231

Query  198  WPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229
            WPQLGQ+ QG++LTPVDA+A I+  +A + A+
Sbjct  232  WPQLGQDSQGRNLTPVDALAAIRCQLAQIQAD  263


>gi|255324837|ref|ZP_05365949.1| conserved hypothetical protein [Corynebacterium tuberculostearicum 
SK141]
 gi|255298103|gb|EET77408.1| conserved hypothetical protein [Corynebacterium tuberculostearicum 
SK141]
Length=74

 Score = 65.9 bits (159),  Expect = 5e-09, Method: Compositional matrix adjust.
 Identities = 28/44 (64%), Positives = 37/44 (85%), Gaps = 0/44 (0%)

Query  183  VREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAM  226
            ++EIW QLRGP G GWPQLGQN++GQ+LT VDA+A I+ D+A +
Sbjct  24   IQEIWRQLRGPGGKGWPQLGQNDEGQNLTLVDAVAAIRQDLARI  67


>gi|54023510|ref|YP_117752.1| hypothetical protein nfa15430 [Nocardia farcinica IFM 10152]
 gi|54015018|dbj|BAD56388.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=310

 Score = 63.2 bits (152),  Expect = 3e-08, Method: Compositional matrix adjust.
 Identities = 59/199 (30%), Positives = 89/199 (45%), Gaps = 23/199 (11%)

Query  2    RSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGL-HPRVALMLDVESG-----GN  55
            R    +G++   I Y +  P   AN +  +S+++ AG    PR+  M+DVE         
Sbjct  47   RELIKAGQIKAVIAYYFFWPGQ-ANCDLHKSILEQAGLWGDPRLVTMVDVEGAPLNGAKR  105

Query  56   PPGDGSSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYGSNPNLP  115
              GD S  +N     L  + G P R+IGY N      +W  R  G+R++   YG  P  P
Sbjct  106  IRGDQSPEVNDEVDRLRKWYGDPRRVIGYWNPIADPELWPSRLDGMRLVVPSYGRPPGQP  165

Query  116  GQ-----VAHQYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMA  170
             Q      AHQYTD    +P  P+G       D+N ++   P +  A+ GV   G P+  
Sbjct  166  AQKPRGYFAHQYTDRGQCAP-WPEG------VDLNFSDLELP-ELLASWGVDQGGRPVGD  217

Query  171  LTDEEQTELLT---KVREI  186
            +  E   +L     K+R+I
Sbjct  218  IVTEAAAQLHPWPGKIRQI  236


>gi|304360974|ref|YP_003857156.1| gp25 [Mycobacterium phage LeBron]
 gi|302858243|gb|ADL70992.1| gp25 [Mycobacterium phage LeBron]
 gi|339781238|gb|AEK07072.1| gp25 [Mycobacterium phage JoeDirt]
Length=390

 Score = 62.4 bits (150),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 26/38 (69%), Positives = 33/38 (87%), Gaps = 0/38 (0%)

Query  183  VREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIK  220
            +REIW+QLRGP G GWPQLG+N +G++LT VDAIA +K
Sbjct  350  IREIWEQLRGPQGKGWPQLGKNAKGENLTLVDAIAELK  387


>gi|339781740|gb|AEK07569.1| gp25 [Mycobacterium phage UPIE]
Length=390

 Score = 62.4 bits (150),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 26/38 (69%), Positives = 33/38 (87%), Gaps = 0/38 (0%)

Query  183  VREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIK  220
            +REIW+QLRGP G GWPQLG+N +G++LT VDAIA +K
Sbjct  350  IREIWEQLRGPQGKGWPQLGKNAKGENLTLVDAIAELK  387


>gi|337290769|ref|YP_004629790.1| hypothetical protein CULC22_01161 [Corynebacterium ulcerans BR-AD22]
 gi|334699075|gb|AEG83871.1| hypothetical protein CULC22_01161 [Corynebacterium ulcerans BR-AD22]
Length=431

 Score = 60.5 bits (145),  Expect = 2e-07, Method: Compositional matrix adjust.
 Identities = 27/53 (51%), Positives = 37/53 (70%), Gaps = 0/53 (0%)

Query  174  EEQTELLTKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAM  226
            E +  +   + EIW QL G  GAGW QLGQN  GQ+LTPVDA+A ++N++A +
Sbjct  368  EGKGRMEKMIEEIWKQLLGETGAGWEQLGQNALGQNLTPVDALAAMRNELAEI  420


>gi|338826876|ref|YP_004678789.1| hypothetical protein GoPhGTE2_gp19 [Gordonia phage GTE2]
 gi|323362504|gb|ADX42605.1| hypothetical protein [Gordonia phage GTE2]
Length=316

 Score = 58.5 bits (140),  Expect = 7e-07, Method: Compositional matrix adjust.
 Identities = 55/185 (30%), Positives = 84/185 (46%), Gaps = 23/185 (12%)

Query  2    RSAFDSGRLTFGIVYTYARPNWWANANTVRSMIDAAGGL-HPRVALMLDVE-SGGNPPGD  59
            +   DSG+L     Y + RP   AN +  + M++ AG   HP +A M+DVE +GG   GD
Sbjct  47   KRMLDSGKLKGVFPYYFFRPGQ-ANCDLHKQMLEEAGLWGHPLLATMVDVEDAGGQIRGD  105

Query  60   GSSWINRLYWNLADYAGSPVRIIGYANAYDFFNMWRVRPAGLRVIGAGYG------SNPN  113
             S+ +N     L  + G   R+ GY N      +W  RP G + +   Y       + PN
Sbjct  106  QSAEVNDEVARLRRWYGDDRRVFGYLNGVANGGLWVTRPPGFKFVTPSYSGRPGVWATPN  165

Query  114  LP-----GQVAHQYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPL  168
             P         HQ+TD +   P       P G  D+N ++ L+ ++  A  G+   GG +
Sbjct  166  PPAWLQNAAFGHQFTDSAVTKPW------PLG-TDLNYSS-LSVEEIQALLGL-KKGGTV  216

Query  169  MALTD  173
             A+ D
Sbjct  217  GAVED  221


>gi|338827039|ref|YP_004538971.1| gp27 [Mycobacterium phage Faith1]
 gi|333495616|gb|AEF57209.1| gp27 [Mycobacterium phage Faith1]
Length=316

 Score = 55.8 bits (133),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 28/66 (43%), Positives = 43/66 (66%), Gaps = 1/66 (1%)

Query  160  GVTTTGGPLMALTDEEQTELLTKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVI  219
            G  T  G  +A   E+ T+    + +IW+QLRGP+G GW QLG+N +G++L+ VDA+A +
Sbjct  251  GFKTESGVKVANLPEDWTDRQV-LNDIWEQLRGPDGKGWEQLGKNAKGENLSLVDAVAEV  309

Query  220  KNDVAA  225
            K  + A
Sbjct  310  KKRLEA  315


>gi|145297115|ref|YP_001139935.1| hypothetical protein cgR_p0020 [Corynebacterium glutamicum R]
 gi|140847062|dbj|BAF56033.1| hypothetical protein [Corynebacterium glutamicum R]
Length=216

 Score = 49.3 bits (116),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 25/52 (49%), Positives = 35/52 (68%), Gaps = 4/52 (7%)

Query  181  TKVREIWDQLRGPNGAG----WPQLGQNEQGQDLTPVDAIAVIKNDVAAMLA  228
            + V++I  QL G    G    WPQLGQN +GQ+LT  DA A I++D++A+LA
Sbjct  159  SDVKDIRQQLTGGRDRGEYPGWPQLGQNAKGQNLTTTDATAAIRHDLSAILA  210


>gi|54022022|ref|YP_116264.1| hypothetical protein nfa580 [Nocardia farcinica IFM 10152]
 gi|54013530|dbj|BAD54900.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=270

 Score = 44.7 bits (104),  Expect = 0.011, Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 31/48 (65%), Gaps = 4/48 (8%)

Query  182  KVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229
            KV E+W+Q+    G GW QLG N +G+ LT VDA+A  K   AA LA+
Sbjct  211  KVNEVWEQV----GRGWKQLGTNAKGEPLTLVDAVAEHKAHTAAELAD  254


>gi|54026944|ref|YP_121186.1| hypothetical protein nfa49700 [Nocardia farcinica IFM 10152]
 gi|54018452|dbj|BAD59822.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=130

 Score = 43.9 bits (102),  Expect = 0.020, Method: Compositional matrix adjust.
 Identities = 21/47 (45%), Positives = 30/47 (64%), Gaps = 0/47 (0%)

Query  183  VREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229
            +R++  QLRGP+ AGWPQLG + +G+  T VD +AV    V  +  E
Sbjct  2    LRDVLTQLRGPSLAGWPQLGTDAEGRARTLVDGLAVALRRVDELTTE  48


>gi|296169737|ref|ZP_06851353.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295895596|gb|EFG75294.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=363

 Score = 42.4 bits (98),  Expect = 0.051, Method: Compositional matrix adjust.
 Identities = 35/80 (44%), Positives = 42/80 (53%), Gaps = 6/80 (7%)

Query  153  QQFAAACGVTTT----GGPLMALTDEEQTELLTKVREIWDQ--LRGPNGAGWPQLGQNEQ  206
            QQ AA    TTT    GGPL ALT EEQ ELL  VR + +Q  +  P+      LGQ+ Q
Sbjct  268  QQLAAGLVPTTTATDQGGPLDALTPEEQHELLDGVRWLREQADVSRPDWDADADLGQDSQ  327

Query  207  GQDLTPVDAIAVIKNDVAAM  226
            G+      AIA I   V A+
Sbjct  328  GRPNNERTAIAKILRTVTAL  347


>gi|111024905|ref|YP_707325.1| hypothetical protein RHA1_ro08120 [Rhodococcus jostii RHA1]
 gi|110823884|gb|ABG99167.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=599

 Score = 42.0 bits (97),  Expect = 0.064, Method: Compositional matrix adjust.
 Identities = 35/113 (31%), Positives = 47/113 (42%), Gaps = 12/113 (10%)

Query  111  NPNLPGQVAHQYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMA  170
            +P   G     Y    GY+ +   GA  F   D    +G  P  +  +     +  P   
Sbjct  318  SPEYAGGTVFHYIAIMGYADD--NGARAFWVAD----SGFVPYGYWCSFEQMASLIPPKG  371

Query  171  LTDEEQTELLTKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDV  223
             T      L+ +V EIW QL G NG GWPQLG        T VDA+A +  D+
Sbjct  372  YTSAAGGHLIVRVGEIWAQLLGINGKGWPQLGGR------TLVDAVATLGQDM  418


 Score = 36.6 bits (83),  Expect = 2.7, Method: Compositional matrix adjust.
 Identities = 20/49 (41%), Positives = 27/49 (56%), Gaps = 6/49 (12%)

Query  175  EQTELLTKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDV  223
            E +    +V +IW QL G NG GWPQLG        T VDA+A +  ++
Sbjct  492  EPSTTANRVLDIWTQLLGINGKGWPQLGGR------TLVDAVATLGQEM  534


 Score = 35.8 bits (81),  Expect = 4.9, Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 23/38 (61%), Gaps = 6/38 (15%)

Query  182  KVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVI  219
            +V +IW QL G +G GWPQL +       TPVD IA I
Sbjct  557  RVLDIWIQLLGFDGKGWPQLNRR------TPVDGIATI  588


>gi|111025190|ref|YP_707610.1| hypothetical protein RHA1_ro08408 [Rhodococcus jostii RHA1]
 gi|110824169|gb|ABG99452.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=599

 Score = 41.6 bits (96),  Expect = 0.082, Method: Compositional matrix adjust.
 Identities = 35/113 (31%), Positives = 47/113 (42%), Gaps = 12/113 (10%)

Query  111  NPNLPGQVAHQYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMA  170
            +P   G     Y    GY+ +   GA  F   D    +G  P  +  +     +  P   
Sbjct  318  SPQYAGGTVFHYIAIMGYADD--NGARAFWVAD----SGFVPYGYWCSFEQMASLIPPKG  371

Query  171  LTDEEQTELLTKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDV  223
             T      L+ +V EIW QL G NG GWPQLG        T VDA+A +  D+
Sbjct  372  YTTATGGHLIVRVGEIWAQLVGINGKGWPQLGGR------TLVDAVATLGQDM  418


 Score = 36.6 bits (83),  Expect = 3.0, Method: Compositional matrix adjust.
 Identities = 20/49 (41%), Positives = 27/49 (56%), Gaps = 6/49 (12%)

Query  175  EQTELLTKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDV  223
            E +    +V +IW QL G NG GWPQLG        T VDA+A +  ++
Sbjct  492  ETSTTANRVLDIWIQLLGINGKGWPQLGGR------TLVDAVATLGQEM  534


 Score = 36.2 bits (82),  Expect = 3.5, Method: Compositional matrix adjust.
 Identities = 19/39 (49%), Positives = 24/39 (62%), Gaps = 6/39 (15%)

Query  181  TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVI  219
            ++V +IW QL G +G GWPQL +       TPVD IA I
Sbjct  556  SRVLDIWIQLLGFDGKGWPQLNRR------TPVDGIATI  588


>gi|111025918|ref|YP_708338.1| hypothetical protein RHA1_ro09137 [Rhodococcus jostii RHA1]
 gi|110824897|gb|ABH00180.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=600

 Score = 41.6 bits (96),  Expect = 0.083, Method: Compositional matrix adjust.
 Identities = 35/113 (31%), Positives = 47/113 (42%), Gaps = 12/113 (10%)

Query  111  NPNLPGQVAHQYTDGSGYSPNLPQGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMA  170
            +P   G     Y    GY+ +   GA  F   D    +G  P  +  +     +  P   
Sbjct  319  SPQYAGGTVFHYIAIMGYADD--NGARAFWVAD----SGFVPYGYWCSFEQMASLIPPKG  372

Query  171  LTDEEQTELLTKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDV  223
             T      L+ +V EIW QL G NG GWPQLG        T VDA+A +  D+
Sbjct  373  YTTATGGHLIVRVGEIWAQLVGINGKGWPQLGGR------TLVDAVATLGQDM  419


 Score = 36.6 bits (83),  Expect = 3.1, Method: Compositional matrix adjust.
 Identities = 20/49 (41%), Positives = 27/49 (56%), Gaps = 6/49 (12%)

Query  175  EQTELLTKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDV  223
            E +    +V +IW QL G NG GWPQLG        T VDA+A +  ++
Sbjct  493  ETSTTANRVLDIWIQLLGINGKGWPQLGGR------TLVDAVATLGQEM  535


 Score = 36.2 bits (82),  Expect = 3.5, Method: Compositional matrix adjust.
 Identities = 19/39 (49%), Positives = 24/39 (62%), Gaps = 6/39 (15%)

Query  181  TKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVI  219
            ++V +IW QL G +G GWPQL +       TPVD IA I
Sbjct  557  SRVLDIWIQLLGFDGKGWPQLNRR------TPVDGIATI  589


>gi|339296413|gb|AEJ48524.1| hypothetical protein CCDC5079_3335 [Mycobacterium tuberculosis 
CCDC5079]
Length=275

 Score = 40.4 bits (93),  Expect = 0.20, Method: Compositional matrix adjust.
 Identities = 23/47 (49%), Positives = 28/47 (60%), Gaps = 6/47 (12%)

Query  183  VREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229
            + E+WDQLRG  G GWP LG      D T VD IA + N V A+ A+
Sbjct  221  LEEVWDQLRGIEGRGWPVLG------DKTIVDYIAELGNKVDALAAK  261


>gi|326385266|ref|ZP_08206929.1| hypothetical protein SCNU_20072 [Gordonia neofelifaecis NRRL 
B-59395]
 gi|326196009|gb|EGD53220.1| hypothetical protein SCNU_20072 [Gordonia neofelifaecis NRRL 
B-59395]
Length=234

 Score = 40.4 bits (93),  Expect = 0.22, Method: Compositional matrix adjust.
 Identities = 29/77 (38%), Positives = 39/77 (51%), Gaps = 14/77 (18%)

Query  149  GLTPQQFAAACGVTTTGGPL-----MALTDEEQTELLTKVREIWDQLRGPNGAGWPQLGQ  203
            G    QF A      TG        MA TDE++     K+  I+ QLR      WPQLG 
Sbjct  163  GFPRAQFVALVNKHLTGTSQQEDDDMAFTDEDRR----KLDYIYGQLRP-----WPQLGT  213

Query  204  NEQGQDLTPVDAIAVIK  220
            N++G+ LT +DA+A +K
Sbjct  214  NDKGEPLTLIDAVAELK  230


>gi|294993714|ref|ZP_06799405.1| hypothetical protein Mtub2_04176 [Mycobacterium tuberculosis 
210]
Length=275

 Score = 39.7 bits (91),  Expect = 0.38, Method: Compositional matrix adjust.
 Identities = 22/47 (47%), Positives = 28/47 (60%), Gaps = 6/47 (12%)

Query  183  VREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229
            + E+WDQLRG  G GWP LG      D T VD +A + N V A+ A+
Sbjct  221  LEEVWDQLRGIEGRGWPVLG------DKTIVDYLAELGNKVDALAAK  261


>gi|15610730|ref|NP_218111.1| hypothetical protein Rv3594 [Mycobacterium tuberculosis H37Rv]
 gi|15843207|ref|NP_338244.1| hypothetical protein MT3700 [Mycobacterium tuberculosis CDC1551]
 gi|31794771|ref|NP_857264.1| hypothetical protein Mb3625 [Mycobacterium bovis AF2122/97]
 63 more sequence titles
 gi|121639514|ref|YP_979738.1| hypothetical protein BCG_3659 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|148663458|ref|YP_001284981.1| hypothetical protein MRA_3633 [Mycobacterium tuberculosis H37Ra]
 gi|148824800|ref|YP_001289554.1| hypothetical protein TBFG_13627 [Mycobacterium tuberculosis F11]
 gi|224992011|ref|YP_002646700.1| hypothetical protein JTY_3660 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253800635|ref|YP_003033636.1| hypothetical protein TBMG_03633 [Mycobacterium tuberculosis KZN 
1435]
 gi|254552704|ref|ZP_05143151.1| hypothetical protein Mtube_20030 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289441024|ref|ZP_06430768.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289445188|ref|ZP_06434932.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289555857|ref|ZP_06445067.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289572248|ref|ZP_06452475.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289747431|ref|ZP_06506809.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289752309|ref|ZP_06511687.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289759751|ref|ZP_06519129.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289763773|ref|ZP_06523151.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|297636270|ref|ZP_06954050.1| hypothetical protein MtubK4_19190 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297733263|ref|ZP_06962381.1| hypothetical protein MtubKR_19325 [Mycobacterium tuberculosis 
KZN R506]
 gi|306777950|ref|ZP_07416287.1| hypothetical protein TMAG_00084 [Mycobacterium tuberculosis SUMu001]
 gi|306778479|ref|ZP_07416816.1| hypothetical protein TMBG_02130 [Mycobacterium tuberculosis SUMu002]
 gi|306790867|ref|ZP_07429189.1| hypothetical protein TMDG_01325 [Mycobacterium tuberculosis SUMu004]
 gi|306791190|ref|ZP_07429492.1| hypothetical protein TMEG_00084 [Mycobacterium tuberculosis SUMu005]
 gi|306795975|ref|ZP_07434277.1| hypothetical protein TMFG_01530 [Mycobacterium tuberculosis SUMu006]
 gi|306801222|ref|ZP_07437890.1| hypothetical protein TMHG_02654 [Mycobacterium tuberculosis SUMu008]
 gi|306805435|ref|ZP_07442103.1| hypothetical protein TMGG_01131 [Mycobacterium tuberculosis SUMu007]
 gi|306969727|ref|ZP_07482388.1| hypothetical protein TMIG_03218 [Mycobacterium tuberculosis SUMu009]
 gi|306974067|ref|ZP_07486728.1| hypothetical protein TMJG_00841 [Mycobacterium tuberculosis SUMu010]
 gi|307081775|ref|ZP_07490945.1| hypothetical protein TMKG_00832 [Mycobacterium tuberculosis SUMu011]
 gi|307086391|ref|ZP_07495504.1| hypothetical protein TMLG_00084 [Mycobacterium tuberculosis SUMu012]
 gi|313660594|ref|ZP_07817474.1| hypothetical protein MtubKV_19320 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339633593|ref|YP_004725235.1| hypothetical protein MAF_36070 [Mycobacterium africanum GM041182]
 gi|2113982|emb|CAB08934.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|13883561|gb|AAK48058.1| hypothetical protein MT3700 [Mycobacterium tuberculosis CDC1551]
 gi|31620368|emb|CAD95811.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121495162|emb|CAL73648.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|148507610|gb|ABQ75419.1| hypothetical protein MRA_3633 [Mycobacterium tuberculosis H37Ra]
 gi|148723327|gb|ABR07952.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224775126|dbj|BAH27932.1| hypothetical protein JTY_3660 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253322138|gb|ACT26741.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289413943|gb|EFD11183.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289418146|gb|EFD15347.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289440489|gb|EFD22982.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289536679|gb|EFD41257.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289687959|gb|EFD55447.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289692896|gb|EFD60325.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289711279|gb|EFD75295.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289715315|gb|EFD79327.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|308213741|gb|EFO73140.1| hypothetical protein TMAG_00084 [Mycobacterium tuberculosis SUMu001]
 gi|308328495|gb|EFP17346.1| hypothetical protein TMBG_02130 [Mycobacterium tuberculosis SUMu002]
 gi|308332748|gb|EFP21599.1| hypothetical protein TMDG_01325 [Mycobacterium tuberculosis SUMu004]
 gi|308340241|gb|EFP29092.1| hypothetical protein TMEG_00084 [Mycobacterium tuberculosis SUMu005]
 gi|308343562|gb|EFP32413.1| hypothetical protein TMFG_01530 [Mycobacterium tuberculosis SUMu006]
 gi|308348030|gb|EFP36881.1| hypothetical protein TMGG_01131 [Mycobacterium tuberculosis SUMu007]
 gi|308351971|gb|EFP40822.1| hypothetical protein TMHG_02654 [Mycobacterium tuberculosis SUMu008]
 gi|308352757|gb|EFP41608.1| hypothetical protein TMIG_03218 [Mycobacterium tuberculosis SUMu009]
 gi|308356606|gb|EFP45457.1| hypothetical protein TMJG_00841 [Mycobacterium tuberculosis SUMu010]
 gi|308360563|gb|EFP49414.1| hypothetical protein TMKG_00832 [Mycobacterium tuberculosis SUMu011]
 gi|308364178|gb|EFP53029.1| hypothetical protein TMLG_00084 [Mycobacterium tuberculosis SUMu012]
 gi|323717724|gb|EGB26923.1| hypothetical protein TMMG_00084 [Mycobacterium tuberculosis CDC1551A]
 gi|326905433|gb|EGE52366.1| hypothetical protein TBPG_03385 [Mycobacterium tuberculosis W-148]
 gi|328460366|gb|AEB05789.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339300014|gb|AEJ52124.1| hypothetical protein CCDC5180_3287 [Mycobacterium tuberculosis 
CCDC5180]
 gi|339332949|emb|CCC28676.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341603535|emb|CCC66216.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344221427|gb|AEN02058.1| hypothetical protein MTCTRI2_3659 [Mycobacterium tuberculosis 
CTRI-2]
Length=275

 Score = 39.3 bits (90),  Expect = 0.40, Method: Compositional matrix adjust.
 Identities = 22/47 (47%), Positives = 28/47 (60%), Gaps = 6/47 (12%)

Query  183  VREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229
            + E+WDQLRG  G GWP LG      D T VD +A + N V A+ A+
Sbjct  221  LEEVWDQLRGIEGRGWPVLG------DKTIVDYLAELGNKVDALAAK  261


>gi|340628559|ref|YP_004747011.1| hypothetical protein MCAN_36061 [Mycobacterium canettii CIPT 
140010059]
 gi|340006749|emb|CCC45937.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=275

 Score = 39.3 bits (90),  Expect = 0.40, Method: Compositional matrix adjust.
 Identities = 22/47 (47%), Positives = 28/47 (60%), Gaps = 6/47 (12%)

Query  183  VREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229
            + E+WDQLRG  G GWP LG      D T VD +A + N V A+ A+
Sbjct  221  LEEVWDQLRGIEGRGWPVLG------DKTIVDYLAELGNKVDALAAK  261


>gi|306786502|ref|ZP_07424824.1| hypothetical protein TMCG_01092 [Mycobacterium tuberculosis SUMu003]
 gi|308328909|gb|EFP17760.1| hypothetical protein TMCG_01092 [Mycobacterium tuberculosis SUMu003]
Length=271

 Score = 39.3 bits (90),  Expect = 0.41, Method: Compositional matrix adjust.
 Identities = 22/47 (47%), Positives = 28/47 (60%), Gaps = 6/47 (12%)

Query  183  VREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDVAAMLAE  229
            + E+WDQLRG  G GWP LG      D T VD +A + N V A+ A+
Sbjct  221  LEEVWDQLRGIEGRGWPVLG------DKTIVDYLAELGNKVDALAAK  261


>gi|111025915|ref|YP_708335.1| metallopeptidase [Rhodococcus jostii RHA1]
 gi|110824894|gb|ABH00177.1| possible metallopeptidase [Rhodococcus jostii RHA1]
Length=602

 Score = 38.1 bits (87),  Expect = 1.00, Method: Compositional matrix adjust.
 Identities = 18/44 (41%), Positives = 27/44 (62%), Gaps = 6/44 (13%)

Query  180  LTKVREIWDQLRGPNGAGWPQLGQNEQGQDLTPVDAIAVIKNDV  223
            + + R+++DQ+RGP+G GW QLG          VDAIA I + +
Sbjct  560  VDRARDVFDQIRGPDGTGWNQLGNRSL------VDAIAAIGHQL  597


>gi|109521486|ref|YP_655914.1| gp49 [Mycobacterium phage Wildcat]
 gi|91980938|gb|ABE67654.1| gp49 [Mycobacterium phage Wildcat]
Length=502

 Score = 38.1 bits (87),  Expect = 1.1, Method: Compositional matrix adjust.
 Identities = 25/62 (41%), Positives = 30/62 (49%), Gaps = 0/62 (0%)

Query  134  QGAPPFGRCDMNSANGLTPQQFAAACGVTTTGGPLMALTDEEQTELLTKVREIWDQLRGP  193
            QG    G  DMN        +  +   V   GG LMAL+D EQ ELL KVR++W     P
Sbjct  354  QGKWDPGAIDMNIHRRDVQARIDSFNPVGGDGGWLMALSDAEQRELLDKVRQLWGASFNP  413

Query  194  NG  195
             G
Sbjct  414  VG  415



Lambda     K      H
   0.317    0.136    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 297403917052


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40