BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3768 Length=119 Score E Sequences producing significant alignments: (Bits) Value gi|15610904|ref|NP_218285.1| hypothetical protein Rv3768 [Mycoba... 243 5e-63 gi|289445367|ref|ZP_06435111.1| conserved hypothetical protein [... 240 4e-62 gi|340628738|ref|YP_004747190.1| hypothetical protein MCAN_37881... 234 3e-60 gi|183985292|ref|YP_001853583.1| hypothetical protein MMAR_5324 ... 179 1e-43 gi|240168534|ref|ZP_04747193.1| hypothetical protein MkanA1_0442... 176 1e-42 gi|342860022|ref|ZP_08716674.1| hypothetical protein MCOL_14120 ... 174 5e-42 gi|118619536|ref|YP_907868.1| hypothetical protein MUL_4403 [Myc... 171 4e-41 gi|254822470|ref|ZP_05227471.1| hypothetical protein MintA_21226... 168 2e-40 gi|217977762|ref|YP_002361909.1| hypothetical protein Msil_1598 ... 138 3e-31 gi|345011920|ref|YP_004814274.1| hypothetical protein Strvi_4348... 137 6e-31 gi|297161632|gb|ADI11344.1| hypothetical protein SBI_08226 [Stre... 128 3e-28 gi|333992683|ref|YP_004525297.1| hypothetical protein JDM601_404... 103 1e-20 gi|295135860|ref|YP_003586536.1| hypothetical protein ZPR_4036 [... 85.1 3e-15 gi|223937787|ref|ZP_03629688.1| conserved hypothetical protein [... 73.2 1e-11 gi|339728170|emb|CCC39296.1| conserved hypothetical protein [Hal... 72.8 1e-11 gi|110667270|ref|YP_657081.1| hypothetical protein HQ1303A [Halo... 71.2 4e-11 gi|163793493|ref|ZP_02187468.1| hypothetical protein BAL199_0325... 66.6 1e-09 gi|24078521|gb|AAN45860.1|AF489107_2 putative protein [Acinetoba... 62.8 2e-08 gi|311746275|ref|ZP_07720060.1| hypothetical protein ALPR1_07670... 58.2 4e-07 gi|153004410|ref|YP_001378735.1| hypothetical protein Anae109_15... 56.2 1e-06 gi|300711023|ref|YP_003736837.1| hypothetical protein HacjB3_083... 55.8 2e-06 gi|336288063|gb|AEI30338.1| conserved hypothetical protein [uncu... 54.7 4e-06 gi|296158722|ref|ZP_06841551.1| conserved hypothetical protein [... 50.1 1e-04 gi|120612606|ref|YP_972284.1| hypothetical protein Aave_3967 [Ac... 47.4 8e-04 gi|302533319|ref|ZP_07285661.1| predicted protein [Streptomyces ... 47.0 0.001 gi|325121642|gb|ADY81165.1| hypothetical protein BDGL_000579 [Ac... 46.2 0.001 gi|260549463|ref|ZP_05823682.1| predicted protein [Acinetobacter... 46.2 0.001 gi|238764810|ref|ZP_04625752.1| hypothetical protein ykris0001_2... 45.8 0.002 gi|298714375|emb|CBJ27432.1| conserved unknown protein [Ectocarp... 45.1 0.004 gi|91782943|ref|YP_558149.1| hypothetical protein Bxe_A2877 [Bur... 44.7 0.005 gi|330890148|gb|EGH22809.1| hypothetical protein PSYMO_15506 [Ps... 44.7 0.005 gi|332160520|ref|YP_004297097.1| hypothetical protein YE105_C089... 43.1 0.013 gi|123443562|ref|YP_001007535.1| hypothetical protein YE3363 [Ye... 42.4 0.021 gi|332535428|ref|ZP_08411215.1| putative transcriptional regulat... 42.0 0.030 gi|319795074|ref|YP_004156714.1| hypothetical protein Varpa_4435... 42.0 0.031 gi|339052195|ref|ZP_08647956.1| Putative transcriptional regulat... 41.2 0.049 gi|227112640|ref|ZP_03826296.1| hypothetical protein PcarbP_0673... 40.8 0.065 gi|227329646|ref|ZP_03833670.1| hypothetical protein PcarcW_2078... 40.8 0.066 gi|206580436|ref|YP_002237230.1| Yybh protein [Klebsiella pneumo... 40.8 0.067 gi|253687054|ref|YP_003016244.1| hypothetical protein PC1_0653 [... 40.8 0.072 gi|153010825|ref|YP_001372039.1| hypothetical protein Oant_3504 ... 40.4 0.081 gi|152979962|ref|YP_001353174.1| hypothetical protein mma_1484 [... 40.4 0.088 gi|339763051|gb|AEJ99271.1| hypothetical protein KPN2242_16905 [... 40.0 0.11 gi|284042884|ref|YP_003393224.1| hypothetical protein Cwoe_1421 ... 40.0 0.11 gi|319790933|ref|YP_004152573.1| hypothetical protein Varpa_0240... 40.0 0.11 gi|262042047|ref|ZP_06015224.1| conserved hypothetical protein [... 40.0 0.11 gi|294146781|ref|YP_003559447.1| hypothetical protein SJA_C2-035... 40.0 0.12 gi|239816819|ref|YP_002945729.1| hypothetical protein Vapar_3849... 40.0 0.12 gi|238895893|ref|YP_002920629.1| hypothetical protein KP1_4016 [... 40.0 0.12 gi|152971299|ref|YP_001336408.1| hypothetical protein KPN_02768 ... 39.7 0.14 >gi|15610904|ref|NP_218285.1| hypothetical protein Rv3768 [Mycobacterium tuberculosis H37Rv] gi|15843388|ref|NP_338425.1| hypothetical protein MT3875 [Mycobacterium tuberculosis CDC1551] gi|31794938|ref|NP_857431.1| hypothetical protein Mb3794 [Mycobacterium bovis AF2122/97] 76 more sequence titles Length=119 Score = 243 bits (621), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 119/119 (100%), Positives = 119/119 (100%), Gaps = 0/119 (0%) Query 1 MGSTPPRTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLD 60 MGSTPPRTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLD Sbjct 1 MGSTPPRTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLD 60 Query 61 DIPNALWDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPKT 119 DIPNALWDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPKT Sbjct 61 DIPNALWDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPKT 119 >gi|289445367|ref|ZP_06435111.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289418325|gb|EFD15526.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] Length=119 Score = 240 bits (613), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 118/119 (99%), Positives = 118/119 (99%), Gaps = 0/119 (0%) Query 1 MGSTPPRTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLD 60 MGSTPPRTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIA GKEGIRQLFVKLLD Sbjct 1 MGSTPPRTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIAPGKEGIRQLFVKLLD 60 Query 61 DIPNALWDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPKT 119 DIPNALWDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPKT Sbjct 61 DIPNALWDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPKT 119 >gi|340628738|ref|YP_004747190.1| hypothetical protein MCAN_37881 [Mycobacterium canettii CIPT 140010059] gi|340006928|emb|CCC46119.1| hypothetical protein MCAN_37881 [Mycobacterium canettii CIPT 140010059] Length=119 Score = 234 bits (597), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 112/119 (95%), Positives = 115/119 (97%), Gaps = 0/119 (0%) Query 1 MGSTPPRTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLD 60 MGSTPPRTPQEVFAHHGQALAAGDL+EIVADY DDSFVITPAGIARGKEGIRQLFVKLLD Sbjct 1 MGSTPPRTPQEVFAHHGQALAAGDLEEIVADYTDDSFVITPAGIARGKEGIRQLFVKLLD 60 Query 61 DIPNALWDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPKT 119 DIPNALWDLKTQIFEGD+L LEWTANSAVSR+DDGVDTFVFRDG IWA TVRYTPHPKT Sbjct 61 DIPNALWDLKTQIFEGDVLLLEWTANSAVSRIDDGVDTFVFRDGMIWAQTVRYTPHPKT 119 >gi|183985292|ref|YP_001853583.1| hypothetical protein MMAR_5324 [Mycobacterium marinum M] gi|183178618|gb|ACC43728.1| conserved hypothetical protein [Mycobacterium marinum M] Length=120 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 85/117 (73%), Positives = 99/117 (85%), Gaps = 0/117 (0%) Query 2 GSTPPRTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDD 61 GST RTPQEVFAHHG+ALAAGDLDEI+ADY DDS ++T AG+ARGK+ IRQ+FVKLLDD Sbjct 3 GSTMTRTPQEVFAHHGRALAAGDLDEIIADYDDDSVLLTAAGVARGKDAIRQVFVKLLDD 62 Query 62 IPNALWDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPK 118 +P A WDLK+Q+F+GD+LFLEW A+SA RVDDGVDTF+F G I A TVRYTP K Sbjct 63 LPGATWDLKSQVFDGDLLFLEWAADSAHHRVDDGVDTFIFDGGMIRAQTVRYTPQAK 119 >gi|240168534|ref|ZP_04747193.1| hypothetical protein MkanA1_04427 [Mycobacterium kansasii ATCC 12478] Length=115 Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 83/113 (74%), Positives = 98/113 (87%), Gaps = 0/113 (0%) Query 7 RTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNAL 66 RTPQEVFAHHG+ALA GDLDEIVADYADDS V+T +G+ARGK+ IRQ+FV+LLDD+P+A Sbjct 3 RTPQEVFAHHGRALATGDLDEIVADYADDSVVLTSSGVARGKDAIRQVFVRLLDDLPDAA 62 Query 67 WDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPKT 119 W+LKTQIFEGD+LFLEWTA++ RVDDGVDTFVF DG I A TVRY+ K+ Sbjct 63 WNLKTQIFEGDVLFLEWTADAGHHRVDDGVDTFVFADGMIRAQTVRYSLRAKS 115 >gi|342860022|ref|ZP_08716674.1| hypothetical protein MCOL_14120 [Mycobacterium colombiense CECT 3035] gi|342132400|gb|EGT85629.1| hypothetical protein MCOL_14120 [Mycobacterium colombiense CECT 3035] Length=118 Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 80/113 (71%), Positives = 97/113 (86%), Gaps = 0/113 (0%) Query 6 PRTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNA 65 PRTPQEVFAHHG ALAA DLDEI+ DYA DS V++PAGIARG + IR +F LL D+P+A Sbjct 5 PRTPQEVFAHHGAALAACDLDEILVDYAQDSVVLSPAGIARGTDAIRSVFATLLADLPDA 64 Query 66 LWDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPK 118 WDL+TQ+F+ ++LFL+W+A+SAV+RVDDGVDTFVFRDG I A T+RYTPHPK Sbjct 65 KWDLQTQLFDQEVLFLQWSADSAVNRVDDGVDTFVFRDGMIRAQTIRYTPHPK 117 >gi|118619536|ref|YP_907868.1| hypothetical protein MUL_4403 [Mycobacterium ulcerans Agy99] gi|118571646|gb|ABL06397.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=115 Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 81/112 (73%), Positives = 95/112 (85%), Gaps = 0/112 (0%) Query 7 RTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNAL 66 RTPQEVFAHHG+ALAAGDLDEI+ADY DDS ++T AG+ARGK+ IRQ+FVKLLDD+P A Sbjct 3 RTPQEVFAHHGRALAAGDLDEIIADYDDDSVLLTAAGVARGKDAIRQVFVKLLDDLPGAT 62 Query 67 WDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPK 118 WDLK+Q+F+GD+LFLEW A+SA RVDD VDTF+F G I A TVRYTP K Sbjct 63 WDLKSQVFDGDLLFLEWAADSAHHRVDDDVDTFIFDGGMIRAETVRYTPQAK 114 >gi|254822470|ref|ZP_05227471.1| hypothetical protein MintA_21226 [Mycobacterium intracellulare ATCC 13950] Length=119 Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 89/118 (76%), Positives = 103/118 (88%), Gaps = 0/118 (0%) Query 1 MGSTPPRTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLD 60 M TP RTPQEVFAHHG ALAAGDLDEI+ DYA+DS +ITPAG+ARG++ IR++F +LL Sbjct 1 MTPTPSRTPQEVFAHHGAALAAGDLDEILTDYAEDSVLITPAGVARGRQAIRRVFAQLLA 60 Query 61 DIPNALWDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPK 118 DIP+A WDLKTQ+F+GD+LFLEW A+SA SRVDDGVDTFVFRDG I A TVRYTPHPK Sbjct 61 DIPDANWDLKTQLFDGDVLFLEWAADSAASRVDDGVDTFVFRDGVIAAQTVRYTPHPK 118 >gi|217977762|ref|YP_002361909.1| hypothetical protein Msil_1598 [Methylocella silvestris BL2] gi|217503138|gb|ACK50547.1| conserved hypothetical protein [Methylocella silvestris BL2] Length=114 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 65/108 (61%), Positives = 79/108 (74%), Gaps = 0/108 (0%) Query 7 RTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNAL 66 RTPQE+F HH + L A DLD IV DYA+D+ ++T AG+ RGK G+R+ FV LL D+P A Sbjct 3 RTPQEIFQHHAETLVAADLDGIVYDYAEDAVILTAAGVKRGKAGVREAFVALLADLPQAD 62 Query 67 WDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYT 114 W L T +FEGD LFLEWTA S + DDGVDTF+FRDG I +VRYT Sbjct 63 WALPTVLFEGDALFLEWTAKSKENYADDGVDTFIFRDGFIRLQSVRYT 110 >gi|345011920|ref|YP_004814274.1| hypothetical protein Strvi_4348 [Streptomyces violaceusniger Tu 4113] gi|344038269|gb|AEM83994.1| hypothetical protein Strvi_4348 [Streptomyces violaceusniger Tu 4113] Length=119 Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 65/114 (58%), Positives = 86/114 (76%), Gaps = 1/114 (0%) Query 1 MGSTPPRTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLD 60 M + RTP+++F HG+AL +GDLD I A+YA+D+ +TP+G+ RG+EG++Q LL Sbjct 1 MVAAMTRTPEQIFHDHGRALGSGDLDRISANYAEDAVFVTPSGVLRGREGVKQGIGTLLG 60 Query 61 DIPNALWDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYT 114 D+PNA WDLK Q F D+LFLEW+A + +RV+DGVDTFVFRDG I A TVRYT Sbjct 61 DLPNAAWDLKPQ-FADDVLFLEWSATTGHARVEDGVDTFVFRDGLIQAQTVRYT 113 >gi|297161632|gb|ADI11344.1| hypothetical protein SBI_08226 [Streptomyces bingchenggensis BCW-1] Length=115 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 62/114 (55%), Positives = 80/114 (71%), Gaps = 1/114 (0%) Query 6 PRTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNA 65 PRTPQ VFA HG L G+LD I +Y +D+ +ITP G+ RG++G++ +LL D+P+A Sbjct 2 PRTPQAVFADHGNRLGTGNLDLISQNYTEDAVLITPEGVLRGRQGVKDGIGRLLADLPDA 61 Query 66 LWDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPKT 119 W L Q F G++LFL+WTA SA + DGVDTFVFRDG I A TVRYT P+T Sbjct 62 DWQLTPQ-FAGNVLFLQWTATSATHQATDGVDTFVFRDGLISAQTVRYTLTPRT 114 >gi|333992683|ref|YP_004525297.1| hypothetical protein JDM601_4043 [Mycobacterium sp. JDM601] gi|333488651|gb|AEF38043.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=114 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 53/112 (48%), Positives = 75/112 (67%), Gaps = 1/112 (0%) Query 7 RTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNAL 66 RTPQE+F HH AL A D+D+++ DY DDS +IT AG+A G +GIR F +L D + A+ Sbjct 3 RTPQEIFDHHLHALIARDVDDLLVDYTDDSVLITAAGVATGLDGIRAAFSQLSDALAAAV 62 Query 67 WDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPK 118 +D+K++ + +IL LEWT +S +V DGVDTFVF + +I T+ PK Sbjct 63 FDIKSKTYHDEILLLEWTLDSPGFQV-DGVDTFVFGEDSIRVQTISQLVRPK 113 >gi|295135860|ref|YP_003586536.1| hypothetical protein ZPR_4036 [Zunongwangia profunda SM-A87] gi|294983875|gb|ADF54340.1| conserved hypothetical protein [Zunongwangia profunda SM-A87] Length=115 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 42/113 (38%), Positives = 68/113 (61%), Gaps = 1/113 (0%) Query 7 RTPQEVFAHHGQALAAGDLDE-IVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNA 65 RT +EV H + G ++E + +++ + ++T GI +G EG+R+L L+ D P A Sbjct 2 RTTEEVLKDHLELSKKGSIEEDLHRNFSKNLILLTTHGIDKGHEGLRELNKMLIKDFPEA 61 Query 66 LWDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPK 118 ++ +FE +I FLEWTA S S++DDG D+++ R+G I A T+ YT K Sbjct 62 EFNYINFLFEDEIAFLEWTAYSDSSQIDDGADSYIVREGLIIAQTIHYTIRKK 114 >gi|223937787|ref|ZP_03629688.1| conserved hypothetical protein [bacterium Ellin514] gi|223893580|gb|EEF60040.1| conserved hypothetical protein [bacterium Ellin514] Length=116 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/113 (34%), Positives = 62/113 (55%), Gaps = 2/113 (1%) Query 8 TPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDI--PNA 65 T +++ HH Q+ GDL +++DYA + + TP G +G + I+ F L+ + P A Sbjct 3 TTKDILNHHLQSFDKGDLQGVLSDYAPGAILFTPDGPLKGADAIKPFFQALIAEFAKPGA 62 Query 66 LWDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPK 118 +++K Q EG+ ++ WTA +A + + DTFV RDG I A + PK Sbjct 63 TFNMKQQFVEGEYAYILWTAGTADNVYELATDTFVMRDGKIVAQSFTGKITPK 115 >gi|339728170|emb|CCC39296.1| conserved hypothetical protein [Haloquadratum walsbyi C23] Length=114 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/112 (35%), Positives = 62/112 (56%), Gaps = 1/112 (0%) Query 8 TPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNAL- 66 T ++V HH + AA D++ ++DYADD+ VIT G+ G IR+LF L D+ A+ Sbjct 3 TTEDVLEHHLEVFAARDVEATMSDYADDATVITHDGMYHGTAEIRELFETLYDEFETAVE 62 Query 67 WDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPK 118 ++L+ Q+ + D ++ W A + + + DTFV DG I T+ PK Sbjct 63 FNLQRQVVDDDCAYIVWNAETDENVYEYATDTFVINDGNIVTQTLAAKIDPK 114 >gi|110667270|ref|YP_657081.1| hypothetical protein HQ1303A [Haloquadratum walsbyi DSM 16790] gi|109625017|emb|CAJ51432.1| conserved hypothetical protein [Haloquadratum walsbyi DSM 16790] Length=114 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 39/112 (35%), Positives = 61/112 (55%), Gaps = 1/112 (0%) Query 8 TPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNAL- 66 T ++V HH + AA D++ ++DYADD+ VIT G G IR+LF L D+ A+ Sbjct 3 TTEDVLEHHLEVFAARDVEATMSDYADDATVITHDGTYHGTVEIRELFETLYDEFETAVE 62 Query 67 WDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPK 118 ++L+ Q+ + D ++ W A + + + DTFV DG I T+ PK Sbjct 63 FNLQRQVVDDDCAYIVWNAETDENVYEYATDTFVINDGNIVTQTLAAKIDPK 114 >gi|163793493|ref|ZP_02187468.1| hypothetical protein BAL199_03259 [alpha proteobacterium BAL199] gi|159181295|gb|EDP65810.1| hypothetical protein BAL199_03259 [alpha proteobacterium BAL199] Length=117 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/115 (32%), Positives = 56/115 (49%), Gaps = 2/115 (1%) Query 6 PRTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNA 65 ++ +EV HH LA+ +++ ++ DY D S + +P G+ G+E I+ L+ + A Sbjct 2 SKSVEEVLGHHMSCLASSNVEGLLEDYTDQSILFSPDGVFEGREQIKTFLNGLVTMMLPA 61 Query 66 LWDLKT--QIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPK 118 + Q G+ +FL W A S + G DT V RDG I HT PK Sbjct 62 GTSFTSVRQDKRGETVFLMWQAESRTMKFHLGTDTLVIRDGKIVTHTFAAAVQPK 116 >gi|24078521|gb|AAN45860.1|AF489107_2 putative protein [Acinetobacter johnsonii] Length=108 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/104 (37%), Positives = 56/104 (54%), Gaps = 9/104 (8%) Query 11 EVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNALWDLK 70 EVF HH A A G +DE++ DY + S + T +G +RG E IR F LD +P+ W+ Sbjct 6 EVFDHHLGAFALG-VDELLKDYDESSVIFTNSGHSRGLEEIRTFFSNFLDSLPDDFWN-D 63 Query 71 TQIFEGDIL----FLEWTANSAVSRVDDGVDTFVFRDGTIWAHT 110 Q+ E +++ +L W+A V+ DT + RDG I T Sbjct 64 FQVLEKEVMAEVAYLVWSAKPYVAL---ATDTMLIRDGKIVTQT 104 >gi|311746275|ref|ZP_07720060.1| hypothetical protein ALPR1_07670 [Algoriphagus sp. PR1] gi|126576508|gb|EAZ80786.1| hypothetical protein ALPR1_07670 [Algoriphagus sp. PR1] Length=155 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/114 (32%), Positives = 53/114 (47%), Gaps = 2/114 (1%) Query 7 RTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNAL 66 T Q+V HH +A DL E++ADY ++S +ITP RG IR+ FV +P Sbjct 42 ETTQQVVDHHFKAFVENDLGEVMADYTEESILITPDRTYRGLAEIRENFVNAYAALPKDS 101 Query 67 WD--LKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPK 118 + L + D+ ++ W A + D D+F+ DG I T PK Sbjct 102 TNVTLIKNLSVKDVGYIIWEAEAPSLSFKDCSDSFIVHDGKIIRQTFMGVITPK 155 >gi|153004410|ref|YP_001378735.1| hypothetical protein Anae109_1546 [Anaeromyxobacter sp. Fw109-5] gi|152027983|gb|ABS25751.1| conserved hypothetical protein [Anaeromyxobacter sp. Fw109-5] Length=120 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/108 (33%), Positives = 53/108 (50%), Gaps = 7/108 (6%) Query 6 PRTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNA 65 PR+ + V +H +A G +D ++ DY D S +IT G IR+ F L ++P Sbjct 10 PRSTEAVLRNHLRAATVG-VDAVMQDYTDRSVLITHDATYCGLPEIRRFFTALFSELPAG 68 Query 66 LWD---LKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHT 110 +D + Q G++ ++ W VSR DTFV R+GTI T Sbjct 69 FFDAMKINRQEIIGEVAYILWERRPIVSR---ATDTFVVRNGTILFQT 113 >gi|300711023|ref|YP_003736837.1| hypothetical protein HacjB3_08310 [Halalkalicoccus jeotgali B3] gi|299124706|gb|ADJ15045.1| hypothetical protein HacjB3_08310 [Halalkalicoccus jeotgali B3] Length=116 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/114 (32%), Positives = 51/114 (45%), Gaps = 2/114 (1%) Query 7 RTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDI--PN 64 T + V HH + A DL ++ DY D S V+T G RG+E I LF L + P Sbjct 2 NTTESVLDHHLETFAEQDLTGVMEDYTDGSVVVTNMGTFRGREEIEGLFEDLFAEFADPE 61 Query 65 ALWDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPK 118 A + Q+ EG+ ++ W A + + + DTF D I T PK Sbjct 62 ATITMDEQLTEGEFGYIIWHAETPENVYEFATDTFYIPDEIIEFQTFAGKVSPK 115 >gi|336288063|gb|AEI30338.1| conserved hypothetical protein [uncultured microorganism] Length=140 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/112 (33%), Positives = 55/112 (50%), Gaps = 7/112 (6%) Query 3 STPPRTPQEVFAHHGQA-LAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDD 61 ST + + V H +A L +D I++DY +D+ +TP + RGK IR FV L + Sbjct 2 STDAKQTELVIQQHLRAFLEDQGVDAILSDYHEDAVFLTPEAVYRGKRAIRAFFVGFLAN 61 Query 62 IPNALWD---LKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHT 110 +P D L+ + D+ ++ W +VS G DTF+ R G I T Sbjct 62 LPAGARDDFELRRIAIDDDLGYIVWDVKGSVSL---GTDTFIVRHGRIAQQT 110 >gi|296158722|ref|ZP_06841551.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] gi|295890927|gb|EFG70716.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] Length=118 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/109 (34%), Positives = 50/109 (46%), Gaps = 7/109 (6%) Query 10 QEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNALW-- 67 +++ HH A A G + EI+ DY DDS ++TP RG+E I F LD A W Sbjct 13 RQILDHHLGAFAHG-VAEILKDYDDDSALVTPDKTFRGREEITGFFKAFLDGADPAFWPA 71 Query 68 -DLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTP 115 + + D+ +L W A V+ DT V +DG I T P Sbjct 72 FRITSMSTVRDVAYLAWEAKPWVTL---ATDTLVVKDGKIAVQTFTAFP 117 >gi|120612606|ref|YP_972284.1| hypothetical protein Aave_3967 [Acidovorax citrulli AAC00-1] gi|120591070|gb|ABM34510.1| conserved hypothetical protein [Acidovorax citrulli AAC00-1] Length=117 Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 32/107 (30%), Positives = 47/107 (44%), Gaps = 7/107 (6%) Query 7 RTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNAL 66 R Q V HH A G ++E++ DY + S ++TP +G++ I F LD A Sbjct 9 RATQSVLDHHLNAFPQG-IEELLKDYDESSALVTPDKTFKGRKEIEGFFQAFLDGADPAF 67 Query 67 W---DLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHT 110 W + + G++ +L W A V DT RDG I T Sbjct 68 WPAFRITSMSTVGEVAYLVWEAKPFVPM---ATDTLYVRDGKIAVQT 111 >gi|302533319|ref|ZP_07285661.1| predicted protein [Streptomyces sp. C] gi|302442214|gb|EFL14030.1| predicted protein [Streptomyces sp. C] Length=113 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/99 (32%), Positives = 47/99 (48%), Gaps = 2/99 (2%) Query 12 VFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNALWDLKT 71 VF ALAA D++ ++ +Y DD+ ++ G + G E +R+ F L P L +L+ Sbjct 12 VFVRQMDALAALDIEAVMKNYTDDAVLLRFEGASVGIEAVRETFTGYLTLKPT-LVELQE 70 Query 72 QIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHT 110 I D +F N ++ T V RDG IW T Sbjct 71 YIETEDTIFYRAIMNLN-GEPENAFGTLVVRDGRIWRQT 108 >gi|325121642|gb|ADY81165.1| hypothetical protein BDGL_000579 [Acinetobacter calcoaceticus PHEA-2] Length=123 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/122 (28%), Positives = 56/122 (46%), Gaps = 17/122 (13%) Query 1 MGSTPPRTPQE-------VFAHHGQALAAGDLDEIVADYADDSFVITPAG-IARGKEGIR 52 M P+T + V H A GD+D + DYA D+ +I G I RG I Sbjct 2 MSVNNPKTENQQTVETLDVLERHLTAFRLGDVDLTLQDYAADAIIINGTGEIIRGTSQIH 61 Query 53 QLFVKLLDD-IPNALWDLKT--QIFEGDILFLEW-TANSAVSRVDDGVDTFVFRDGTIWA 108 + F+ + D P+ D++ + G++ ++ W T N+ ++ DT + R+G I A Sbjct 62 ETFISVFRDYFPDGTRDIEIDEKTICGEVAYIRWRTTNTKLA-----TDTIIVRNGKIVA 116 Query 109 HT 110 T Sbjct 117 QT 118 >gi|260549463|ref|ZP_05823682.1| predicted protein [Acinetobacter sp. RUH2624] gi|260407572|gb|EEX01046.1| predicted protein [Acinetobacter sp. RUH2624] Length=123 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/121 (29%), Positives = 53/121 (44%), Gaps = 15/121 (12%) Query 1 MGSTPPRTPQE-------VFAHHGQALAAGDLDEIVADYADDSFVITPAG-IARGKEGIR 52 M P+T + V H A GD+D + DYA D+ +I G I RG I Sbjct 2 MSLNNPKTENQQSIETLNVLERHLTAFRLGDVDLTLQDYAADAIIINGTGEIVRGTSQIH 61 Query 53 QLFVKLLDD-IPNALWDLKT--QIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAH 109 + FV + D P D++ + G++ ++ W A +A DT + R+G I A Sbjct 62 ETFVSVYRDYFPEGTRDIEIDEKTICGEVAYIRWRAPNA----KLATDTIIVRNGKIVAQ 117 Query 110 T 110 T Sbjct 118 T 118 >gi|238764810|ref|ZP_04625752.1| hypothetical protein ykris0001_29220 [Yersinia kristensenii ATCC 33638] gi|238697008|gb|EEP89783.1| hypothetical protein ykris0001_29220 [Yersinia kristensenii ATCC 33638] Length=139 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/79 (37%), Positives = 43/79 (55%), Gaps = 6/79 (7%) Query 1 MGSTPPRTPQEVFAHHGQALAAGDLDEIVADYADDS-FVITPAGIARGKEGIRQLFVKLL 59 M S P R +V +A++ + DE++ YA+D+ VI P IARGKE IR+ F+ + Sbjct 6 MSSHPIR---QVIEACDKAISERNFDELMKYYAEDAALVIKPGMIARGKENIRKAFIAIS 62 Query 60 DDIPNAL--WDLKTQIFEG 76 D N L + Q+ EG Sbjct 63 DHFKNQLVVEQGEMQVIEG 81 >gi|298714375|emb|CBJ27432.1| conserved unknown protein [Ectocarpus siliculosus] Length=124 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 36/110 (33%), Positives = 51/110 (47%), Gaps = 13/110 (11%) Query 6 PRTPQEVFAHHGQALAAGDLDEIVADYADDSFVIT------PAGIARGKEGIRQLFVKLL 59 P T Q+ + +H A AA D+D I+ DY +DS V T + +G EG R LF L Sbjct 5 PSTVQDAWDNHFAAFAAHDMDRILLDYDEDSVVTTYDQTADRISVFKGVEGARTLFEGLF 64 Query 60 DDIPNALWDLKTQIF----EGDILFLEWTANSAVSRVDDGVDTFVFRDGT 105 + + + DL + E +++FL W S D DTF D T Sbjct 65 EALSDQS-DLAAPVIDVSEESNMVFLVW--RCPASGFLDATDTFTHNDKT 111 >gi|91782943|ref|YP_558149.1| hypothetical protein Bxe_A2877 [Burkholderia xenovorans LB400] gi|91686897|gb|ABE30097.1| hypothetical protein Bxe_A2877 [Burkholderia xenovorans LB400] Length=118 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/109 (31%), Positives = 48/109 (45%), Gaps = 7/109 (6%) Query 10 QEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNALW-- 67 +++ HH A A G + EI+ DY D+S ++TP RG+E I F +D A W Sbjct 13 RQILDHHLGAFAHG-VAEILKDYDDNSALVTPDKTFRGREEITDFFKAFVDGADPAFWPA 71 Query 68 -DLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTIWAHTVRYTP 115 + D+ ++ W A + DT V RDG I T P Sbjct 72 FRITGMSTVRDVAYIAWEAKPWIIL---ATDTLVVRDGKIAVQTFTAFP 117 >gi|330890148|gb|EGH22809.1| hypothetical protein PSYMO_15506 [Pseudomonas syringae pv. mori str. 301020] Length=136 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/103 (33%), Positives = 49/103 (48%), Gaps = 3/103 (2%) Query 6 PRTPQEVFAHHGQALAAGDLDEIVADYADD-SFVITPAGIARGKEGIRQLFVKLLDDIPN 64 RT +E +A+ A D DE++ YADD S V+ P GKE IR+ FV + D N Sbjct 5 TRTLKETIEAADRAITAEDFDELMKFYADDASLVVKPGLTVSGKESIRRAFVAIADHFNN 64 Query 65 ALWDLK--TQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGT 105 ++ + Q+ +G + L + DGV T + R T Sbjct 65 SIVVTQGEIQVIQGGDVALVIMETLLQATDKDGVKTEISRRAT 107 >gi|332160520|ref|YP_004297097.1| hypothetical protein YE105_C0898 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607011|emb|CBY28509.1| hypothetical protein Y11_40211 [Yersinia enterocolitica subsp. palearctica Y11] gi|325664750|gb|ADZ41394.1| hypothetical protein YE105_C0898 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863665|emb|CBX73771.1| uncharacterized protein yybH [Yersinia enterocolitica W22703] Length=131 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 28/79 (36%), Positives = 42/79 (54%), Gaps = 6/79 (7%) Query 1 MGSTPPRTPQEVFAHHGQALAAGDLDEIVADYA-DDSFVITPAGIARGKEGIRQLFVKLL 59 M + P R +V A QA++ + DE++ YA D + VI P I RGK+ IR+ F+ + Sbjct 1 MSAHPIR---QVIAVCDQAISERNFDELMKHYAPDAALVIKPGMIVRGKDNIRKAFIAIS 57 Query 60 DDIPNALW--DLKTQIFEG 76 D N L + Q+ EG Sbjct 58 DHFKNQLVVEQGEMQVIEG 76 >gi|123443562|ref|YP_001007535.1| hypothetical protein YE3363 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090523|emb|CAL13392.1| conserved hypothetical protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length=131 Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust. Identities = 25/70 (36%), Positives = 39/70 (56%), Gaps = 3/70 (4%) Query 10 QEVFAHHGQALAAGDLDEIVADYA-DDSFVITPAGIARGKEGIRQLFVKLLDDIPNALW- 67 ++V A QA++ + DE++ YA D + VI P I RGK+ IR+ F+ + D N L Sbjct 7 RQVIAACDQAISERNFDELMKYYAPDAALVIKPGMIVRGKDNIRKAFIAISDHFKNQLVV 66 Query 68 -DLKTQIFEG 76 + Q+ EG Sbjct 67 EQGEMQVIEG 76 >gi|332535428|ref|ZP_08411215.1| putative transcriptional regulator [Pseudoalteromonas haloplanktis ANT/505] gi|332035152|gb|EGI71664.1| putative transcriptional regulator [Pseudoalteromonas haloplanktis ANT/505] Length=142 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 27/110 (25%), Positives = 47/110 (43%), Gaps = 7/110 (6%) Query 7 RTPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNAL 66 + P + F Q L + +LD + Y D+ I P G +R+ F L ++ + Sbjct 4 QLPVDKFVEIYQQLDSTNLDLLSDIYCDNIQFIDPMHEINGIVELRRYFANLYSNVKHCQ 63 Query 67 WDLKTQIFEGDILFLEWTANSAVSRVD-------DGVDTFVFRDGTIWAH 109 +D+ G+ F+ WT + A ++ DG +F+DG I H Sbjct 64 FDISDSFNSGNNAFIYWTMHYAHPKLSSGKTISVDGHSKLIFKDGKIIKH 113 >gi|319795074|ref|YP_004156714.1| hypothetical protein Varpa_4435 [Variovorax paradoxus EPS] gi|315597537|gb|ADU38603.1| protein of unknown function DUF1486 [Variovorax paradoxus EPS] Length=135 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 32/105 (31%), Positives = 44/105 (42%), Gaps = 10/105 (9%) Query 24 DLDEIVADYADDSFVITPAGI----AR--GKEGIRQLFVKLLDDIPNALWDLKTQIFEGD 77 D+D +++ D T AG AR G E +R+ F +P+A W GD Sbjct 26 DIDALMSFMTPDCIFQTAAGPDACGARHVGTEAVRKAFAGAWQAVPDAQWVNGQHFVHGD 85 Query 78 ILFLEWTANSAV---SRVD-DGVDTFVFRDGTIWAHTVRYTPHPK 118 +WT SR++ DG+D F FRDG I V P Sbjct 86 FGTSQWTFTGTAADGSRIETDGIDVFTFRDGKIHLKNVFRKARPN 130 >gi|339052195|ref|ZP_08647956.1| Putative transcriptional regulator [gamma proteobacterium IMCC2047] gi|330721597|gb|EGG99620.1| Putative transcriptional regulator [gamma proteobacterium IMCC2047] Length=131 Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust. Identities = 22/83 (27%), Positives = 34/83 (41%), Gaps = 0/83 (0%) Query 18 QALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNALWDLKTQIFEGD 77 + L LD + Y D + PA +G + F KL D++ + + + +GD Sbjct 3 ENLGKNSLDGLTTLYTKDVYFEDPAHAIQGISALTDYFEKLFDNVESCQFRFHNNLCQGD 62 Query 78 ILFLEWTANSAVSRVDDGVDTFV 100 LFL WT + G FV Sbjct 63 KLFLCWTMTLQHKSLKGGQKIFV 85 >gi|227112640|ref|ZP_03826296.1| hypothetical protein PcarbP_06737 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length=132 Score = 40.8 bits (94), Expect = 0.065, Method: Compositional matrix adjust. Identities = 24/74 (33%), Positives = 40/74 (55%), Gaps = 3/74 (4%) Query 6 PRTPQEVFAHHGQALAAGDLDEIVADYADDS-FVITPAGIARGKEGIRQLFVKLLDDIPN 64 P +E+ +A++ + D +++ YA+D+ VI P +ARGK+ IR+ FV + D N Sbjct 5 PHPIREIIEACDKAISERNFDALMSYYAEDAALVIKPGMVARGKDDIRKAFVAIADYFKN 64 Query 65 ALW--DLKTQIFEG 76 L Q+ EG Sbjct 65 QLVVEQGNMQVIEG 78 >gi|227329646|ref|ZP_03833670.1| hypothetical protein PcarcW_20783 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length=130 Score = 40.8 bits (94), Expect = 0.066, Method: Compositional matrix adjust. Identities = 24/74 (33%), Positives = 40/74 (55%), Gaps = 3/74 (4%) Query 6 PRTPQEVFAHHGQALAAGDLDEIVADYADDS-FVITPAGIARGKEGIRQLFVKLLDDIPN 64 P +E+ +A++ + D +++ YA+D+ VI P +ARGK+ IR+ FV + D N Sbjct 3 PHPIREIIEACDKAISERNFDALMSYYAEDAALVIKPGMVARGKDDIRKAFVAIADYFKN 62 Query 65 ALW--DLKTQIFEG 76 L Q+ EG Sbjct 63 QLIVEQGNMQVIEG 76 >gi|206580436|ref|YP_002237230.1| Yybh protein [Klebsiella pneumoniae 342] gi|290508372|ref|ZP_06547743.1| yybH [Klebsiella sp. 1_1_55] gi|206569494|gb|ACI11270.1| Yybh protein [Klebsiella pneumoniae 342] gi|289777766|gb|EFD85763.1| yybH [Klebsiella sp. 1_1_55] Length=131 Score = 40.8 bits (94), Expect = 0.067, Method: Compositional matrix adjust. Identities = 33/109 (31%), Positives = 56/109 (52%), Gaps = 20/109 (18%) Query 18 QALAAGDLDEIVADYADD-SFVITPAGIARGKEGIRQLFVKLLDDIPNALWDLKTQIFEG 76 +A++ D D ++A YA+D + V+ P + RGKE IR+ F+ + D + L + +G Sbjct 17 RAISQEDYDTLMAYYAEDAALVVKPGMVVRGKENIRKAFIAIADYFQHRLV-----VTQG 71 Query 77 DILFLEWTANSAV---SRVD----DGVD------TFVF-RDGTIWAHTV 111 + +E N+ V +R+D DG+ T+VF + G W TV Sbjct 72 KMEVIEGGGNALVIMETRLDIPTADGISQVTRRATYVFQKQGERWLCTV 120 >gi|253687054|ref|YP_003016244.1| hypothetical protein PC1_0653 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753632|gb|ACT11708.1| conserved hypothetical protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length=130 Score = 40.8 bits (94), Expect = 0.072, Method: Compositional matrix adjust. Identities = 24/74 (33%), Positives = 39/74 (53%), Gaps = 3/74 (4%) Query 6 PRTPQEVFAHHGQALAAGDLDEIVADYADDS-FVITPAGIARGKEGIRQLFVKLLDDIPN 64 P +E+ +A++ D D ++ YA+D+ VI P +ARGK+ IR+ F+ + D N Sbjct 3 PHPIREIIEACDKAISERDFDALMRYYAEDAALVIKPGMVARGKDDIRKAFIAIADYFRN 62 Query 65 ALW--DLKTQIFEG 76 L Q+ EG Sbjct 63 QLLVEQGNMQVIEG 76 >gi|153010825|ref|YP_001372039.1| hypothetical protein Oant_3504 [Ochrobactrum anthropi ATCC 49188] gi|151562713|gb|ABS16210.1| protein of unknown function DUF1486 [Ochrobactrum anthropi ATCC 49188] Length=129 Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust. Identities = 33/95 (35%), Positives = 43/95 (46%), Gaps = 14/95 (14%) Query 24 DLDEIVADYADDSFVITPAGIA------RGKEGIRQLFVKLLDDIPNALWDLKTQIFEGD 77 D+D I+A +ADD T G GK+ I + F + +P+ WD GD Sbjct 22 DIDAIMAFFADDCVFYTIGGEEVYGTRLEGKDAIAKAFSGVWAAMPDVKWDGHRHFVSGD 81 Query 78 ILFLEWT-----ANSAVSRVD-DGVDTFVFRDGTI 106 EWT AN A RV+ +G D F RDG I Sbjct 82 RAVSEWTFRGTDANGA--RVEAEGCDLFTQRDGKI 114 >gi|152979962|ref|YP_001353174.1| hypothetical protein mma_1484 [Janthinobacterium sp. Marseille] gi|151280039|gb|ABR88449.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length=288 Score = 40.4 bits (93), Expect = 0.088, Method: Compositional matrix adjust. Identities = 26/84 (31%), Positives = 39/84 (47%), Gaps = 10/84 (11%) Query 8 TPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLD----DIP 63 P+ + HG + + D D + A+ A+D VI P + RG+ G +LLD IP Sbjct 30 NPKTLVCVHGLSRVSDDFDMLAAELANDYRVICPDVVGRGRSG------RLLDPQYYQIP 83 Query 64 NALWDLKTQIFEGDILFLEWTANS 87 + D+ T I D+ L W S Sbjct 84 QYVSDMVTLIARLDVTELHWLGTS 107 >gi|339763051|gb|AEJ99271.1| hypothetical protein KPN2242_16905 [Klebsiella pneumoniae KCTC 2242] Length=131 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 32/109 (30%), Positives = 56/109 (52%), Gaps = 20/109 (18%) Query 18 QALAAGDLDEIVADYADD-SFVITPAGIARGKEGIRQLFVKLLDDIPNALWDLKTQIFEG 76 +A++ D D +++ YA+D + V+ P + RGKE IR+ F+ + D + L + +G Sbjct 17 RAISQEDYDTLMSYYAEDAALVVKPGMVVRGKENIRKAFIAIADYFQHRLV-----VTQG 71 Query 77 DILFLEWTANSAV---SRVD----DGVD------TFVF-RDGTIWAHTV 111 + +E N+ V +R+D DG+ T+VF + G W TV Sbjct 72 KMEVIEGGGNALVIMETRLDIPTADGISQVTRRATYVFQKQGERWLCTV 120 >gi|284042884|ref|YP_003393224.1| hypothetical protein Cwoe_1421 [Conexibacter woesei DSM 14684] gi|283947105|gb|ADB49849.1| conserved hypothetical protein [Conexibacter woesei DSM 14684] Length=125 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 23/101 (23%), Positives = 52/101 (52%), Gaps = 3/101 (2%) Query 8 TPQEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIAR--GKEGIRQLFVKLLDDIPNA 65 + E+F + A + DLD I++ +++D G G+E +R F+ L P+ Sbjct 2 SLSELFERYDDAWSRHDLDTIMSMHSEDGVFQLHMGKEEVSGREQVRAAFIAELQKYPDL 61 Query 66 LWDLKTQIFEGDILFLEWTANSAVSRVDDGVDTFVFRDGTI 106 ++ ++ + GD++ E+ ++ +R+ + +D FV +G + Sbjct 62 RFERRSVRYAGDMIIFEYVMHTGGARM-NALDVFVVTEGLV 101 >gi|319790933|ref|YP_004152573.1| hypothetical protein Varpa_0240 [Variovorax paradoxus EPS] gi|315593396|gb|ADU34462.1| protein of unknown function DUF1486 [Variovorax paradoxus EPS] Length=156 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/111 (28%), Positives = 47/111 (43%), Gaps = 2/111 (1%) Query 10 QEVFAHHGQALAAGDLDEIVADYADDSFVITPAGIARGKEGIRQLFVKLLDDIPNALWDL 69 Q V A + + L D D + Y + +V A G EG R+ L + PN+ ++ Sbjct 39 QTVLAFYEKGLNQKDADAAL-QYVGNRYVQHNPTAADGPEGFRKFIAFLREKFPNSRSEI 97 Query 70 KTQIFEGDILFLEWTA-NSAVSRVDDGVDTFVFRDGTIWAHTVRYTPHPKT 119 K +GD + L A +R + VD F +G I H P P+T Sbjct 98 KRSFVDGDYVILHVNAVREPGTRGNAIVDIFKLENGKIVEHWDVVQPVPET 148 >gi|262042047|ref|ZP_06015224.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040587|gb|EEW41681.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length=131 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 34/122 (28%), Positives = 59/122 (49%), Gaps = 20/122 (16%) Query 5 PPRTPQEVFAHHGQALAAGDLDEIVADYADD-SFVITPAGIARGKEGIRQLFVKLLDDIP 63 P + V +A++ D D +++ YA+D + V+ P + RGKE IR+ F+ + D Sbjct 4 PDLALKAVIEACDRAISQEDYDTLMSYYAEDAALVVKPGMVVRGKENIRKAFIAIADYFQ 63 Query 64 NALWDLKTQIFEGDILFLEWTANSAV---SRVD----DGVD------TFVF-RDGTIWAH 109 + L + +G + +E N+ V +R+D DG+ T+VF + G W Sbjct 64 HRLV-----VTQGKMEVIEGGGNALVIMETRLDIPTADGISQVTRRATYVFQKQGERWLC 118 Query 110 TV 111 TV Sbjct 119 TV 120 >gi|294146781|ref|YP_003559447.1| hypothetical protein SJA_C2-03520 [Sphingobium japonicum UT26S] gi|292677198|dbj|BAI98715.1| hypothetical protein SJA_C2-03520 [Sphingobium japonicum UT26S] Length=145 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 32/111 (29%), Positives = 48/111 (44%), Gaps = 15/111 (13%) Query 11 EVFAHHGQALAAGDLDEIVADYADDSFVITPA------------GIARGKEGIRQLFVKL 58 EV A H +++ G L I+ DY+ D+ V+TP GI G+ R++F L Sbjct 27 EVVARHVESMKLGKLQPIMDDYSADTVVVTPQGLVADQAPARGPGIYSGQAQARRVFATL 86 Query 59 LD-DIPNALWDLKTQIFEG--DILFLEWTANSAVSRVDDGVDTFVFRDGTI 106 D D + ++T I D + L W + G D F+ RD I Sbjct 87 TDKDHHPGIKAMETTIEPAGPDSVILHWVQFKGQPQQVSGKDAFIVRDDKI 137 >gi|239816819|ref|YP_002945729.1| hypothetical protein Vapar_3849 [Variovorax paradoxus S110] gi|239803396|gb|ACS20463.1| protein of unknown function DUF1486 [Variovorax paradoxus S110] Length=140 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 32/118 (28%), Positives = 44/118 (38%), Gaps = 10/118 (8%) Query 11 EVFAHHGQALAAGDLDEIVADYADDSFVITPAG------IARGKEGIRQLFVKLLDDIPN 64 E A A D+D ++ +D T AG G E +R+ F +P+ Sbjct 18 ETLAAFSDAWNRHDIDALMGFMTEDCIFQTAAGPDACGTRHVGTEAVRKAFAAAWQAVPD 77 Query 65 ALWDLKTQIFEGDILFLEWTANSAV---SRVD-DGVDTFVFRDGTIWAHTVRYTPHPK 118 A W GD +WT SR++ DG+D F FR G I V P Sbjct 78 AQWINGRHFVHGDFGTSQWTFTGTASDGSRIEADGIDVFTFRGGKIHLKNVFRKARPN 135 >gi|238895893|ref|YP_002920629.1| hypothetical protein KP1_4016 [Klebsiella pneumoniae NTUH-K2044] gi|238548211|dbj|BAH64562.1| hypothetical protein KP1_4016 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length=131 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 32/109 (30%), Positives = 56/109 (52%), Gaps = 20/109 (18%) Query 18 QALAAGDLDEIVADYADD-SFVITPAGIARGKEGIRQLFVKLLDDIPNALWDLKTQIFEG 76 +A++ D D +++ YA+D + V+ P + RGKE IR+ F+ + D + L + +G Sbjct 17 RAISQEDYDTLMSYYAEDAALVVKPGMVVRGKENIRKAFIAIADYFQHRLV-----VTQG 71 Query 77 DILFLEWTANSAV---SRVD----DGVD------TFVF-RDGTIWAHTV 111 + +E N+ V +R+D DG+ T+VF + G W TV Sbjct 72 KMEVIEGGGNALVIMETRLDIPTADGISQVTRRATYVFQKQGERWLCTV 120 >gi|152971299|ref|YP_001336408.1| hypothetical protein KPN_02768 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150956148|gb|ABR78178.1| hypothetical protein KPN_02768 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length=131 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 32/109 (30%), Positives = 56/109 (52%), Gaps = 20/109 (18%) Query 18 QALAAGDLDEIVADYADD-SFVITPAGIARGKEGIRQLFVKLLDDIPNALWDLKTQIFEG 76 +A++ D D +++ YA+D + V+ P + RGKE IR+ F+ + D + L + +G Sbjct 17 RAISQEDYDTLMSYYAEDAALVVKPGMVVRGKENIRKAFIAIADYFQHRLV-----VTQG 71 Query 77 DILFLEWTANSAV---SRVD----DGVD------TFVF-RDGTIWAHTV 111 + +E N+ V +R+D DG+ T+VF + G W TV Sbjct 72 KMEVIEGGGNALVIMETRLDIPTADGISQVTRRATYVFQKQGERWLCTV 120 Lambda K H 0.321 0.139 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 129033565320 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40