BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3779 Length=666 Score E Sequences producing significant alignments: (Bits) Value gi|15610915|ref|NP_218296.1| transmembrane protein alanine and l... 1315 0.0 gi|254233273|ref|ZP_04926599.1| hypothetical protein TBCG_03706 ... 1314 0.0 gi|15843402|ref|NP_338439.1| hypothetical protein MT3888 [Mycoba... 1313 0.0 gi|340628749|ref|YP_004747201.1| hypothetical protein MCAN_37991... 1312 0.0 gi|308376228|ref|ZP_07438088.2| conserved alanine and leucine ri... 1311 0.0 gi|240168550|ref|ZP_04747209.1| transmembrane protein [Mycobacte... 1073 0.0 gi|289572028|ref|ZP_06452255.1| conserved alanine and leucine ri... 1070 0.0 gi|183985302|ref|YP_001853593.1| transmembrane protein [Mycobact... 1051 0.0 gi|118616000|ref|YP_904332.1| transmembrane protein [Mycobacteri... 1043 0.0 gi|296166906|ref|ZP_06849323.1| transmembrane protein alanine an... 943 0.0 gi|41406341|ref|NP_959177.1| hypothetical protein MAP0243c [Myco... 931 0.0 gi|336461594|gb|EGO40460.1| hypothetical protein MAPs_29350 [Myc... 931 0.0 gi|342860036|ref|ZP_08716688.1| hypothetical protein MCOL_14195 ... 921 0.0 gi|254773298|ref|ZP_05214814.1| hypothetical protein MaviaA2_012... 894 0.0 gi|15826949|ref|NP_301212.1| hypothetical protein ML0116 [Mycoba... 871 0.0 gi|254822482|ref|ZP_05227483.1| hypothetical protein MintA_21286... 870 0.0 gi|333992719|ref|YP_004525333.1| transmembrane protein [Mycobact... 766 0.0 gi|169627310|ref|YP_001700959.1| hypothetical protein MAB_0205c ... 565 9e-159 gi|289755912|ref|ZP_06515290.1| LOW QUALITY PROTEIN: transmembra... 389 7e-106 gi|262200604|ref|YP_003271812.1| hypothetical protein Gbro_0591 ... 257 6e-66 gi|343924263|ref|ZP_08763823.1| hypothetical protein GOALK_005_0... 214 3e-53 gi|296393692|ref|YP_003658576.1| hypothetical protein Srot_1275 ... 197 4e-48 gi|317506830|ref|ZP_07964603.1| hypothetical protein HMPREF9336_... 196 1e-47 gi|319949388|ref|ZP_08023455.1| hypothetical protein ES5_08136 [... 192 1e-46 gi|25027131|ref|NP_737185.1| hypothetical protein CE0575 [Coryne... 163 1e-37 gi|227541768|ref|ZP_03971817.1| conserved hypothetical protein [... 161 4e-37 gi|227487068|ref|ZP_03917384.1| conserved hypothetical protein [... 152 3e-34 gi|300779793|ref|ZP_07089649.1| conserved hypothetical protein [... 144 7e-32 gi|145294738|ref|YP_001137559.1| hypothetical protein cgR_0686 [... 143 1e-31 gi|305679879|ref|ZP_07402689.1| putative membrane protein [Coryn... 143 1e-31 gi|344045899|gb|EGV41568.1| hypothetical protein CgS9114_02128 [... 142 2e-31 gi|225020489|ref|ZP_03709681.1| hypothetical protein CORMATOL_00... 142 3e-31 gi|334564205|ref|ZP_08517196.1| hypothetical protein CbovD2_0648... 139 1e-30 gi|19551802|ref|NP_599804.1| hypothetical protein NCgl0543 [Cory... 138 3e-30 gi|62389457|ref|YP_224859.1| hypothetical protein cg0658 [Coryne... 137 5e-30 gi|227549871|ref|ZP_03979920.1| conserved hypothetical protein [... 136 1e-29 gi|336326393|ref|YP_004606359.1| hypothetical protein CRES_1842 ... 134 4e-29 gi|213964889|ref|ZP_03393088.1| hypothetical membrane protein [C... 121 4e-25 gi|302530928|ref|ZP_07283270.1| predicted protein [Streptomyces ... 105 4e-20 gi|269794224|ref|YP_003313679.1| hypothetical protein Sked_08940... 94.7 5e-17 gi|116671235|ref|YP_832168.1| hypothetical protein Arth_2689 [Ar... 87.8 5e-15 gi|300782157|ref|YP_003762448.1| hypothetical protein AMED_0223 ... 80.9 6e-13 gi|269794220|ref|YP_003313675.1| hypothetical protein Sked_08900... 79.3 2e-12 gi|311112512|ref|YP_003983734.1| hypothetical protein HMPREF0733... 77.4 9e-12 gi|283457133|ref|YP_003361698.1| putative ATP-dependent serine p... 73.6 1e-10 gi|300742609|ref|ZP_07072630.1| conserved hypothetical protein [... 71.2 5e-10 gi|184200547|ref|YP_001854754.1| hypothetical protein KRH_09010 ... 68.6 4e-09 gi|300790707|ref|YP_003770998.1| hypothetical protein AMED_8905 ... 67.8 6e-09 gi|302531570|ref|ZP_07283912.1| predicted protein [Streptomyces ... 67.0 1e-08 gi|255326441|ref|ZP_05367523.1| conserved hypothetical protein [... 64.7 5e-08 >gi|15610915|ref|NP_218296.1| transmembrane protein alanine and leucine rich [Mycobacterium tuberculosis H37Rv] gi|31794952|ref|NP_857445.1| transmembrane protein alanine and leucine rich [Mycobacterium bovis AF2122/97] gi|121639696|ref|YP_979920.1| putative transmembrane protein alanine and leucine rich [Mycobacterium bovis BCG str. Pasteur 1173P2] 68 more sequence titles Length=666 Score = 1315 bits (3402), Expect = 0.0, Method: Compositional matrix adjust. Identities = 665/666 (99%), Positives = 666/666 (100%), Gaps = 0/666 (0%) Query 1 VGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG 60 +GLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG Sbjct 1 MGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG 60 Query 61 WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG 120 WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG Sbjct 61 WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG 120 Query 121 IPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC 180 IPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC Sbjct 121 IPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC 180 Query 181 QLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGT 240 QLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGT Sbjct 181 QLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGT 240 Query 241 AAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSL 300 AAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSL Sbjct 241 AAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSL 300 Query 301 HITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDII 360 HITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDII Sbjct 301 HITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDII 360 Query 361 AGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLL 420 AGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLL Sbjct 361 AGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLL 420 Query 421 LIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAA 480 LIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAA Sbjct 421 LIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAA 480 Query 481 AKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAM 540 AKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAM Sbjct 481 AKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAM 540 Query 541 AYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNG 600 AYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNG Sbjct 541 AYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNG 600 Query 601 ESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGT 660 ESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGT Sbjct 601 ESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGT 660 Query 661 AAATHS 666 AAATHS Sbjct 661 AAATHS 666 >gi|254233273|ref|ZP_04926599.1| hypothetical protein TBCG_03706 [Mycobacterium tuberculosis C] gi|124603066|gb|EAY61341.1| hypothetical protein TBCG_03706 [Mycobacterium tuberculosis C] Length=666 Score = 1314 bits (3400), Expect = 0.0, Method: Compositional matrix adjust. Identities = 664/666 (99%), Positives = 665/666 (99%), Gaps = 0/666 (0%) Query 1 VGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG 60 +GLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG Sbjct 1 MGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG 60 Query 61 WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG 120 WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG Sbjct 61 WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG 120 Query 121 IPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC 180 IPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC Sbjct 121 IPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC 180 Query 181 QLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGT 240 QLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGT Sbjct 181 QLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGT 240 Query 241 AAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSL 300 AAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSL Sbjct 241 AAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSL 300 Query 301 HITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDII 360 HITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDII Sbjct 301 HITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDII 360 Query 361 AGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLL 420 AGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLL Sbjct 361 AGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLL 420 Query 421 LIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAA 480 LIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAA Sbjct 421 LIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAA 480 Query 481 AKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAM 540 AKRLTDRFRPQPVSVWASATATLLIGATLVS WHYFPRHRFLFGDKYDSVMIDQKDLDAM Sbjct 481 AKRLTDRFRPQPVSVWASATATLLIGATLVSTWHYFPRHRFLFGDKYDSVMIDQKDLDAM 540 Query 541 AYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNG 600 AYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNG Sbjct 541 AYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNG 600 Query 601 ESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGT 660 ESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGT Sbjct 601 ESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGT 660 Query 661 AAATHS 666 AAATHS Sbjct 661 AAATHS 666 >gi|15843402|ref|NP_338439.1| hypothetical protein MT3888 [Mycobacterium tuberculosis CDC1551] gi|13883768|gb|AAK48253.1| hypothetical protein MT3888 [Mycobacterium tuberculosis CDC1551] Length=666 Score = 1313 bits (3397), Expect = 0.0, Method: Compositional matrix adjust. Identities = 664/666 (99%), Positives = 665/666 (99%), Gaps = 0/666 (0%) Query 1 VGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG 60 +GLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG Sbjct 1 MGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG 60 Query 61 WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG 120 WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG Sbjct 61 WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG 120 Query 121 IPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC 180 IPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC Sbjct 121 IPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC 180 Query 181 QLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGT 240 QLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGT Sbjct 181 QLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGT 240 Query 241 AAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSL 300 AAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSL Sbjct 241 AAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSL 300 Query 301 HITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDII 360 HITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDII Sbjct 301 HITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDII 360 Query 361 AGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLL 420 AGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLL Sbjct 361 AGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLL 420 Query 421 LIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAA 480 LIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAA Sbjct 421 LIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAA 480 Query 481 AKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAM 540 AKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAM Sbjct 481 AKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAM 540 Query 541 AYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNG 600 AYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFW YGRNG Sbjct 541 AYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWXYGRNG 600 Query 601 ESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGT 660 ESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGT Sbjct 601 ESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGT 660 Query 661 AAATHS 666 AAATHS Sbjct 661 AAATHS 666 >gi|340628749|ref|YP_004747201.1| hypothetical protein MCAN_37991 [Mycobacterium canettii CIPT 140010059] gi|340006939|emb|CCC46130.1| putative conserved transmembrane protein alanine and leucine rich [Mycobacterium canettii CIPT 140010059] Length=666 Score = 1312 bits (3395), Expect = 0.0, Method: Compositional matrix adjust. Identities = 663/666 (99%), Positives = 665/666 (99%), Gaps = 0/666 (0%) Query 1 VGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG 60 +GLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG Sbjct 1 MGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG 60 Query 61 WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG 120 WTALAALAVTCAVATGLQLLLARFRDLDAEALA+SRWPAVTVAAGVLLGALLIGWAAYRG Sbjct 61 WTALAALAVTCAVATGLQLLLARFRDLDAEALAISRWPAVTVAAGVLLGALLIGWAAYRG 120 Query 121 IPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC 180 IPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC Sbjct 121 IPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC 180 Query 181 QLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGT 240 QLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGT Sbjct 181 QLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGT 240 Query 241 AAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSL 300 AAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSL Sbjct 241 AAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSL 300 Query 301 HITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDII 360 HITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDII Sbjct 301 HITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDII 360 Query 361 AGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLL 420 AGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLL Sbjct 361 AGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLL 420 Query 421 LIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAA 480 LIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAA Sbjct 421 LIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAA 480 Query 481 AKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAM 540 AKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAM Sbjct 481 AKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAM 540 Query 541 AYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNG 600 AYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNG Sbjct 541 AYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNG 600 Query 601 ESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGT 660 ESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGT Sbjct 601 ESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGT 660 Query 661 AAATHS 666 AATHS Sbjct 661 GAATHS 666 >gi|308376228|ref|ZP_07438088.2| conserved alanine and leucine rich membrane protein [Mycobacterium tuberculosis SUMu008] gi|308351790|gb|EFP40641.1| conserved alanine and leucine rich membrane protein [Mycobacterium tuberculosis SUMu008] Length=664 Score = 1311 bits (3394), Expect = 0.0, Method: Compositional matrix adjust. Identities = 663/664 (99%), Positives = 664/664 (100%), Gaps = 0/664 (0%) Query 3 LWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWT 62 +WFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWT Sbjct 1 MWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWT 60 Query 63 ALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRGIP 122 ALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRGIP Sbjct 61 ALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRGIP 120 Query 123 HWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQL 182 HWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQL Sbjct 121 HWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQL 180 Query 183 TGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAA 242 TGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAA Sbjct 181 TGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAA 240 Query 243 ALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHI 302 ALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHI Sbjct 241 ALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHI 300 Query 303 TGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDIIAG 362 TGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDIIAG Sbjct 301 TGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDIIAG 360 Query 363 HAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLLLI 422 HAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLLLI Sbjct 361 HAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLLLI 420 Query 423 VMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAK 482 VMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAK Sbjct 421 VMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAK 480 Query 483 RLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAMAY 542 RLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAMAY Sbjct 481 RLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAMAY 540 Query 543 LASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGES 602 LASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGES Sbjct 541 LASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGES 600 Query 603 DPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGTAA 662 DPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGTAA Sbjct 601 DPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGTAA 660 Query 663 ATHS 666 ATHS Sbjct 661 ATHS 664 >gi|240168550|ref|ZP_04747209.1| transmembrane protein [Mycobacterium kansasii ATCC 12478] Length=656 Score = 1073 bits (2774), Expect = 0.0, Method: Compositional matrix adjust. Identities = 555/666 (84%), Positives = 594/666 (90%), Gaps = 10/666 (1%) Query 1 VGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG 60 + LWFGTLIAL+LLIAPGA+VARIAQL WP AIAVGP LTYGV+A+AI+PYGALGIPWNG Sbjct 1 MSLWFGTLIALVLLIAPGAIVARIAQLNWPTAIAVGPPLTYGVIAVAILPYGALGIPWNG 60 Query 61 WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG 120 WTAL ALAV AVA GLQLL RFRD DAEA AV R PA+TVAAGVLLG L IGWAAYRG Sbjct 61 WTALVALAVVAAVAIGLQLLSGRFRDRDAEARAVGRGPALTVAAGVLLGVLFIGWAAYRG 120 Query 121 IPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC 180 IPHWQSIPSTWDAVWHANTVRFILDTGQAS THMGELRNVETHA LYYPSVFH L AVFC Sbjct 121 IPHWQSIPSTWDAVWHANTVRFILDTGQASPTHMGELRNVETHALLYYPSVFHALAAVFC 180 Query 181 QLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGT 240 QLTGAA TTGYTL+SLAA++WLFPVSAAVLTWRAVR+H + EWR AGAA T Sbjct 181 QLTGAAATTGYTLNSLAAAIWLFPVSAAVLTWRAVRTH----------TTEWRTAGAAAT 230 Query 241 AAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSL 300 AAALSASFTAVPYVEFDTAAMPNLAAYG+AVPTM LITSTLRHRDRIPVAVLA VGV S+ Sbjct 231 AAALSASFTAVPYVEFDTAAMPNLAAYGVAVPTMALITSTLRHRDRIPVAVLAFVGVLSV 290 Query 301 HITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDII 360 HI+GG+VV LLVSAWWLF+AL HPVR RLADLLTLAGVA ++GL+MLPQFLSV+QQEDII Sbjct 291 HISGGLVVVLLVSAWWLFDALWHPVRGRLADLLTLAGVAVISGLIMLPQFLSVQQQEDII 350 Query 361 AGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLL 420 AGH+F TYLSKKRGLFDAVFQHSRHLNDFPVQY LI+LAA+GG +LLVKKIWWPLAVWLL Sbjct 351 AGHSFLTYLSKKRGLFDAVFQHSRHLNDFPVQYGLILLAAVGGFMLLVKKIWWPLAVWLL 410 Query 421 LIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAA 480 L+VMNV+AGTPLGGPIG VAG LGEFFY+DPRRIAAATTLLLMLMAGVALF VML VA Sbjct 411 LVVMNVNAGTPLGGPIGAVAGGLGEFFYNDPRRIAAATTLLLMLMAGVALFTIVMLAVAG 470 Query 481 AKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAM 540 AKRLT RF+ P W S TA LL G L SAWHYFPRHRFLFGDKYDSVMIDQ+DLDAM Sbjct 471 AKRLTQRFKTLPQPFWTSVTAALLAGICLASAWHYFPRHRFLFGDKYDSVMIDQRDLDAM 530 Query 541 AYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNG 600 AYLA+LPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYP+QQGPGYHRFIFWAY RNG Sbjct 531 AYLATLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPVQQGPGYHRFIFWAYARNG 590 Query 601 ESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGT 660 ++DPRVLE+I+ L IRYILTS+PTVRGFAVPDGLVSLE S SW KIYDNG ARIYEWRG Sbjct 591 DTDPRVLESIKALNIRYILTSSPTVRGFAVPDGLVSLEKSPSWKKIYDNGGARIYEWRGQ 650 Query 661 AAATHS 666 ++ THS Sbjct 651 SSTTHS 656 >gi|289572028|ref|ZP_06452255.1| conserved alanine and leucine rich membrane protein [Mycobacterium tuberculosis T17] gi|289545782|gb|EFD49430.1| conserved alanine and leucine rich membrane protein [Mycobacterium tuberculosis T17] Length=552 Score = 1070 bits (2768), Expect = 0.0, Method: Compositional matrix adjust. Identities = 536/539 (99%), Positives = 536/539 (99%), Gaps = 0/539 (0%) Query 128 PSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTGAAP 187 P DAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTGAAP Sbjct 14 PQHLDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTGAAP 73 Query 188 TTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAALSAS 247 TTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAALSAS Sbjct 74 TTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAALSAS 133 Query 248 FTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITGGIV 307 FTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITGGIV Sbjct 134 FTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITGGIV 193 Query 308 VALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDIIAGHAFPT 367 VALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDIIAGHAFPT Sbjct 194 VALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDIIAGHAFPT 253 Query 368 YLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLLLIVMNVD 427 YLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLLLIVMNVD Sbjct 254 YLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLLLIVMNVD 313 Query 428 AGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAKRLTDR 487 AGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAKRLTDR Sbjct 314 AGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAKRLTDR 373 Query 488 FRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAMAYLASLP 547 FRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAMAYLASLP Sbjct 374 FRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAMAYLASLP 433 Query 548 GARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGESDPRVL 607 GARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGESDPRVL Sbjct 434 GARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGESDPRVL 493 Query 608 EAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGTAAATHS 666 EAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGTAAATHS Sbjct 494 EAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGTAAATHS 552 >gi|183985302|ref|YP_001853593.1| transmembrane protein [Mycobacterium marinum M] gi|183178628|gb|ACC43738.1| conserved transmembrane protein [Mycobacterium marinum M] Length=657 Score = 1051 bits (2719), Expect = 0.0, Method: Compositional matrix adjust. Identities = 541/664 (82%), Positives = 583/664 (88%), Gaps = 10/664 (1%) Query 3 LWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWT 62 LWFGTLIALILLIAPG ++ARIAQL WP+AIAVGP LTYGV+ALAI+PYGALGIPWNGWT Sbjct 3 LWFGTLIALILLIAPGTLIARIAQLSWPIAIAVGPPLTYGVIALAIVPYGALGIPWNGWT 62 Query 63 ALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRGIP 122 AL ALAV A TG QLLL RFRD +AEA VSR PA+TVAAGV LG L I WAAYRGIP Sbjct 63 ALLALAVVAAAVTGFQLLLGRFRDKEAEARGVSRGPALTVAAGVALGTLFIAWAAYRGIP 122 Query 123 HWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQL 182 HWQSIPSTWDAVWHANTVRFILDTGQAS THMGELRNVETHA LYYPSVFHGL AVFCQL Sbjct 123 HWQSIPSTWDAVWHANTVRFILDTGQASPTHMGELRNVETHALLYYPSVFHGLTAVFCQL 182 Query 183 TGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAA 242 TGAAPTTGYTL+SLAA++WLFPVSAA LTWRA+R H EWR AG+A TAA Sbjct 183 TGAAPTTGYTLNSLAAAIWLFPVSAATLTWRAMRGH----------LTEWRTAGSAATAA 232 Query 243 ALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHI 302 ALSASFTA+PYVEF TAAMPNLA+YG+AVP MVLITST RHRDRIP+AVLALVGV S+HI Sbjct 233 ALSASFTALPYVEFGTAAMPNLASYGVAVPAMVLITSTPRHRDRIPIAVLALVGVLSVHI 292 Query 303 TGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDIIAG 362 GG+VV LLV+AWWLFEAL HPVR RLADL TLAGVAA++GL+MLPQF+SV QQEDIIAG Sbjct 293 AGGMVVVLLVAAWWLFEALWHPVRGRLADLATLAGVAAISGLIMLPQFISVEQQEDIIAG 352 Query 363 HAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLLLI 422 H+F TYLSKKRG+FDAVFQHSRHLNDFPVQYALI LAAIGG ILL+KKIWWPLAVW+LL+ Sbjct 353 HSFLTYLSKKRGVFDAVFQHSRHLNDFPVQYALIALAAIGGFILLIKKIWWPLAVWVLLV 412 Query 423 VMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAK 482 VMNV+AGTPLGGPI +AGALGEFFY+DPRRIAAATTLLLMLMAGVALF V L+V AA+ Sbjct 413 VMNVNAGTPLGGPIDAMAGALGEFFYNDPRRIAAATTLLLMLMAGVALFWIVTLVVTAAQ 472 Query 483 RLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAMAY 542 LTDRFRP P W S T LL+G LVS WHYFPRHRFLFGDKYDSVMIDQKDLDAMAY Sbjct 473 GLTDRFRPLPQPFWVSVTVALLLGVCLVSTWHYFPRHRFLFGDKYDSVMIDQKDLDAMAY 532 Query 543 LASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGES 602 LA+LPGARDT+IGNANTDGTAWMYAVAGLHPLWTHYDYP+QQGPGYHRFI WAY G+S Sbjct 533 LATLPGARDTMIGNANTDGTAWMYAVAGLHPLWTHYDYPVQQGPGYHRFIVWAYAGRGDS 592 Query 603 DPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGTAA 662 DPRV+E+I+VL IRYILTS+PTVRGFAVPDGLVSLE S SW KIYDNG ARIYEW G A Sbjct 593 DPRVVESIKVLNIRYILTSSPTVRGFAVPDGLVSLENSPSWKKIYDNGGARIYEWSGKTA 652 Query 663 ATHS 666 THS Sbjct 653 QTHS 656 >gi|118616000|ref|YP_904332.1| transmembrane protein [Mycobacterium ulcerans Agy99] gi|118568110|gb|ABL02861.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99] Length=657 Score = 1043 bits (2697), Expect = 0.0, Method: Compositional matrix adjust. Identities = 539/664 (82%), Positives = 583/664 (88%), Gaps = 10/664 (1%) Query 3 LWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWT 62 LWFGTLIALILLIAPG ++ARIAQL WP+AIAVGP LTYGV+ALAI+PYGALGIPWNGWT Sbjct 3 LWFGTLIALILLIAPGTLIARIAQLSWPIAIAVGPPLTYGVIALAIVPYGALGIPWNGWT 62 Query 63 ALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRGIP 122 AL ALAV A TG QLLL RFRD +AEA VSR PA+TVAAGV LG L I WAAYRGIP Sbjct 63 ALVALAVVTAAVTGFQLLLGRFRDKEAEARGVSRGPALTVAAGVALGTLFIAWAAYRGIP 122 Query 123 HWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQL 182 HWQSIPS+WDAVWHANTVRFILDTGQAS THMGELRNVETHA LYYPSVFHGL VFCQL Sbjct 123 HWQSIPSSWDAVWHANTVRFILDTGQASPTHMGELRNVETHALLYYPSVFHGLTTVFCQL 182 Query 183 TGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAA 242 TGAAPTTGYTL+SLAA++WLFPVSAA LTWRA+R H EWR AG+A TAA Sbjct 183 TGAAPTTGYTLNSLAAAIWLFPVSAATLTWRAMRGH----------LTEWRTAGSAATAA 232 Query 243 ALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHI 302 ALSASFTA+PYVEF TAAMPNLA+YG+AVP MVLITST RHRDRIP+AVLALVGV S+HI Sbjct 233 ALSASFTALPYVEFGTAAMPNLASYGVAVPAMVLITSTPRHRDRIPIAVLALVGVLSVHI 292 Query 303 TGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDIIAG 362 GG+VV LLV+AWWLF AL HPVR RLADL TLAGVAA++GL+MLPQF+SV QQEDIIAG Sbjct 293 AGGMVVVLLVAAWWLFGALWHPVRGRLADLATLAGVAAISGLIMLPQFISVEQQEDIIAG 352 Query 363 HAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLLLI 422 H+F TYLSKKRG+FDAVFQHSRHLNDFPVQYALI LAAIGG ILL+KKIWWPLAVWLLL+ Sbjct 353 HSFLTYLSKKRGVFDAVFQHSRHLNDFPVQYALIALAAIGGFILLIKKIWWPLAVWLLLV 412 Query 423 VMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAK 482 VMNV+AGTPLGGPI +AG+LGEFFY+DPRRIAAATTLLLMLMAGVALF V L+VAAA+ Sbjct 413 VMNVNAGTPLGGPIDAMAGSLGEFFYNDPRRIAAATTLLLMLMAGVALFWIVTLVVAAAR 472 Query 483 RLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAMAY 542 LTDRFRP P W S T LL+G LVS WHYFPRHRFLFGDKYDSVMIDQKDLDAMAY Sbjct 473 GLTDRFRPLPQPFWVSVTVALLLGVCLVSTWHYFPRHRFLFGDKYDSVMIDQKDLDAMAY 532 Query 543 LASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGES 602 LA+LPGARDT+IG+ANTDGTAWMYAVAGLHPLWTHYDYP+QQGPGYHRFIFWAY G+S Sbjct 533 LATLPGARDTMIGDANTDGTAWMYAVAGLHPLWTHYDYPVQQGPGYHRFIFWAYAGRGDS 592 Query 603 DPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGTAA 662 DPRV+E+I+VL IRYILTS+PTVRGFAVPDGLVSLE S SW KIYDNG ARIYEW G A Sbjct 593 DPRVVESIKVLNIRYILTSSPTVRGFAVPDGLVSLENSPSWKKIYDNGGARIYEWSGKTA 652 Query 663 ATHS 666 THS Sbjct 653 QTHS 656 >gi|296166906|ref|ZP_06849323.1| transmembrane protein alanine and leucine rich [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897783|gb|EFG77372.1| transmembrane protein alanine and leucine rich [Mycobacterium parascrofulaceum ATCC BAA-614] Length=657 Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust. Identities = 494/667 (75%), Positives = 549/667 (83%), Gaps = 11/667 (1%) Query 1 VGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG 60 +GLWFGTLIAL LLIAPGA++ARI+QL WP+A+AVGPALTYG +ALAIIP+GA+GIPWNG Sbjct 1 MGLWFGTLIALFLLIAPGAIIARISQLSWPIAVAVGPALTYGAIALAIIPFGAVGIPWNG 60 Query 61 WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG 120 WTALA LA C V T LQL L R+RD AEA + WPA TVA GVL+G+LLI WAAYRG Sbjct 61 WTALATLATVCLVMTVLQLALGRYRDTGAEARGIGGWPAATVAVGVLVGSLLIMWAAYRG 120 Query 121 IP-HWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVF 179 + HWQ+IPSTWDAVWHAN VRFILDTGQASSTHMGELRNVETH LYYPSVFH VAVF Sbjct 121 LAAHWQTIPSTWDAVWHANEVRFILDTGQASSTHMGELRNVETHQTLYYPSVFHAWVAVF 180 Query 180 CQLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAG 239 CQLTGAAPTTGYTL S+AASVWLFP SAA+LTWR +R H W EWR AGAA Sbjct 181 CQLTGAAPTTGYTLCSVAASVWLFPTSAAMLTWRLLRPH----WC------EWRTAGAAA 230 Query 240 TAAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFS 299 TAAALSASFTA+PYVEF AAMPNLAAYG+AVPT VLI S LRHRDRIPVAVLA VGV S Sbjct 231 TAAALSASFTALPYVEFGVAAMPNLAAYGVAVPTFVLIASALRHRDRIPVAVLAFVGVMS 290 Query 300 LHITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDI 359 +H+TGG +V L WWL + + PVR RLAD TLAGVA GL++LPQF+SVRQQEDI Sbjct 291 VHLTGGFIVVLFAVGWWLLDVVWRPVRGRLADAATLAGVAIATGLILLPQFISVRQQEDI 350 Query 360 IAGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWL 419 IAGH+F T LS KRGL+DA+FQHSRHLNDFP QY L+ LA +GG+I KKIWWPLAVWL Sbjct 351 IAGHSFLTRLSMKRGLYDAIFQHSRHLNDFPYQYGLMALAILGGVIFAYKKIWWPLAVWL 410 Query 420 LLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVA 479 LL+ + VDAGTPLGG G +AGA GEFFY DPRRI+AA TLLL MAGVALF VM +VA Sbjct 411 LLVAVEVDAGTPLGGRFGALAGAFGEFFYKDPRRISAAITLLLEPMAGVALFVIVMAVVA 470 Query 480 AAKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDA 539 AKR+ RFRPQP VWA+ATA LL+ T+ +A HYF RH LFGDKYDSVMIDQ+DL A Sbjct 471 GAKRVAGRFRPQPAPVWAAATAVLLVATTVFAARHYFYRHLVLFGDKYDSVMIDQRDLMA 530 Query 540 MAYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRN 599 MAYLA+LPGARDT+IGNANTDGTAWMYAVA LHPLWTHYDYP Q GPG +RF+FWAY R Sbjct 531 MAYLATLPGARDTVIGNANTDGTAWMYAVADLHPLWTHYDYPQQMGPGPNRFVFWAYARK 590 Query 600 GESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRG 659 G+SDPRV+EAI+ L IRYI TSTPTVRGFAVPDGLVSL+ S+SWA IYDNG ARIYEWRG Sbjct 591 GDSDPRVVEAIKALNIRYIYTSTPTVRGFAVPDGLVSLDKSKSWALIYDNGGARIYEWRG 650 Query 660 TAAATHS 666 + AA HS Sbjct 651 SGAAPHS 657 >gi|41406341|ref|NP_959177.1| hypothetical protein MAP0243c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394689|gb|AAS02560.1| hypothetical protein MAP_0243c [Mycobacterium avium subsp. paratuberculosis K-10] Length=657 Score = 931 bits (2407), Expect = 0.0, Method: Compositional matrix adjust. Identities = 510/666 (77%), Positives = 561/666 (85%), Gaps = 11/666 (1%) Query 1 VGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG 60 +GLWFGTLIAL LLIAPGA++ARI+QL WP+A+AVGPALTYG+VALAIIP+GA+GIPWNG Sbjct 1 MGLWFGTLIALFLLIAPGAIIARISQLTWPIAVAVGPALTYGMVALAIIPFGAIGIPWNG 60 Query 61 WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG 120 WTALAAL V C + TGLQLLLARFRD DAEA AVSRWPA VAAGVLLGA LI WAAYRG Sbjct 61 WTALAALVVVCLLMTGLQLLLARFRDRDAEARAVSRWPAAAVAAGVLLGAFLIMWAAYRG 120 Query 121 IP-HWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVF 179 + HWQ+IPSTWDAVWHAN VRFILDTGQASSTHMGELRNVETH LYYPSVFH L+AVF Sbjct 121 LAAHWQTIPSTWDAVWHANEVRFILDTGQASSTHMGELRNVETHQMLYYPSVFHALIAVF 180 Query 180 CQLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAG 239 CQLTGAAPTTGYTLSS+AASVWLFP SAA+LTWR +R G EWR AGAA Sbjct 181 CQLTGAAPTTGYTLSSVAASVWLFPTSAALLTWRLLRPSWG----------EWRTAGAAA 230 Query 240 TAAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFS 299 TA ALSASFTAVPYVEF AAMPNLAAYG+A+PT VLITSTLRHRDRIP AVLALVGV S Sbjct 231 TAGALSASFTAVPYVEFGVAAMPNLAAYGVAIPTFVLITSTLRHRDRIPAAVLALVGVMS 290 Query 300 LHITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDI 359 +HITGG++V L + AWWL +AL HPVR RLAD+ L V A++GL++LPQF+SV+QQEDI Sbjct 291 VHITGGVIVLLFLIAWWLLDALWHPVRGRLADVAALVCVTAISGLILLPQFISVQQQEDI 350 Query 360 IAGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWL 419 IAGH+F TYLSKKRGLFDAVFQHSRHLNDFPVQY LI LAAIG ++LLVKKIWWPLAVWL Sbjct 351 IAGHSFLTYLSKKRGLFDAVFQHSRHLNDFPVQYGLIALAAIGAIVLLVKKIWWPLAVWL 410 Query 420 LLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVA 479 LL+V+NVDAG PLGGPIG +AGA GEFFY DPRRI+AA TLLL MAG+ALF V VA Sbjct 411 LLVVVNVDAGNPLGGPIGALAGAFGEFFYKDPRRISAAITLLLEPMAGLALFLVVTACVA 470 Query 480 AAKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDA 539 AKR R+RP P VW SATA LL+ T++SA HY RH LFGDKYDSVMIDQ+DL A Sbjct 471 GAKRAGGRWRPLPAPVWVSATAVLLVATTMLSARHYLYRHLVLFGDKYDSVMIDQRDLMA 530 Query 540 MAYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRN 599 MAYLA LPGA +TLIGN NTDGTAWMYAVA LHPLWTHYDYP Q GPG +RFIFWAY R Sbjct 531 MAYLAKLPGAHETLIGNGNTDGTAWMYAVADLHPLWTHYDYPQQMGPGPNRFIFWAYARR 590 Query 600 GESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRG 659 G+SDPRV+ AI+ L IRYILTSTPTVRGFAVP+GLVSL+ S+SWA IYDNG ARIYEWR Sbjct 591 GDSDPRVVAAIKALNIRYILTSTPTVRGFAVPEGLVSLDKSKSWALIYDNGGARIYEWRA 650 Query 660 TAAATH 665 A H Sbjct 651 EATTPH 656 >gi|336461594|gb|EGO40460.1| hypothetical protein MAPs_29350 [Mycobacterium avium subsp. paratuberculosis S397] Length=657 Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust. Identities = 509/666 (77%), Positives = 561/666 (85%), Gaps = 11/666 (1%) Query 1 VGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG 60 +G WFGTLIAL LLIAPGA++ARI+QL WP+A+AVGPALTYG+VALAIIP+GA+GIPWNG Sbjct 1 MGFWFGTLIALFLLIAPGAIIARISQLTWPIAVAVGPALTYGMVALAIIPFGAIGIPWNG 60 Query 61 WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG 120 WTALAAL V C + TGLQLLLARFRD DAEA AVSRWPA VAAGVLLGA LI WAAYRG Sbjct 61 WTALAALVVVCLLMTGLQLLLARFRDRDAEARAVSRWPAAAVAAGVLLGAFLIMWAAYRG 120 Query 121 IP-HWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVF 179 + HWQ+IPSTWDAVWHAN VRFILDTGQASSTHMGELRNVETH LYYPSVFH L+AVF Sbjct 121 LAAHWQTIPSTWDAVWHANEVRFILDTGQASSTHMGELRNVETHQMLYYPSVFHALIAVF 180 Query 180 CQLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAG 239 CQLTGAAPTTGYTLSS+AASVWLFP SAA+LTWR +R G EWR AGAA Sbjct 181 CQLTGAAPTTGYTLSSVAASVWLFPTSAALLTWRLLRPSWG----------EWRTAGAAA 230 Query 240 TAAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFS 299 TA ALSASFTAVPYVEF AAMPNLAAYG+A+PT VLITSTLRHRDRIP AVLALVGV S Sbjct 231 TAGALSASFTAVPYVEFGVAAMPNLAAYGVAIPTFVLITSTLRHRDRIPAAVLALVGVMS 290 Query 300 LHITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDI 359 +HITGG++V L + AWWL +AL HPVR RLAD+ L V A++GL++LPQF+SV+QQEDI Sbjct 291 VHITGGVIVLLFLIAWWLLDALWHPVRGRLADVAALVCVTAISGLILLPQFISVQQQEDI 350 Query 360 IAGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWL 419 IAGH+F TYLSKKRGLFDAVFQHSRHLNDFPVQY LI LAAIG ++LLVKKIWWPLAVWL Sbjct 351 IAGHSFLTYLSKKRGLFDAVFQHSRHLNDFPVQYGLIALAAIGAIVLLVKKIWWPLAVWL 410 Query 420 LLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVA 479 LL+V+NVDAG PLGGPIG +AGA GEFFY DPRRI+AA TLLL MAG+ALF V VA Sbjct 411 LLVVVNVDAGNPLGGPIGALAGAFGEFFYKDPRRISAAITLLLEPMAGLALFLVVTACVA 470 Query 480 AAKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDA 539 AKR+ R+RP P VW SATA LL+ T++SA HY RH LFGDKYDSVMIDQ+DL A Sbjct 471 GAKRVGGRWRPLPAPVWVSATAVLLVATTMLSARHYLYRHLVLFGDKYDSVMIDQRDLMA 530 Query 540 MAYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRN 599 MAYLA LPGA +TLIGN NTDGTAWMYAVA LHPLWTHYDYP Q GPG +RFIFWAY R Sbjct 531 MAYLAKLPGAHETLIGNGNTDGTAWMYAVADLHPLWTHYDYPQQMGPGPNRFIFWAYARR 590 Query 600 GESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRG 659 G+SDPRV+ AI+ L IRYILTSTPTVRGFAVP+GLVSL+ S+SWA IYDNG ARIYEWR Sbjct 591 GDSDPRVVAAIKALNIRYILTSTPTVRGFAVPEGLVSLDKSKSWALIYDNGGARIYEWRA 650 Query 660 TAAATH 665 A H Sbjct 651 EATTPH 656 >gi|342860036|ref|ZP_08716688.1| hypothetical protein MCOL_14195 [Mycobacterium colombiense CECT 3035] gi|342132414|gb|EGT85643.1| hypothetical protein MCOL_14195 [Mycobacterium colombiense CECT 3035] Length=647 Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust. Identities = 486/657 (74%), Positives = 542/657 (83%), Gaps = 11/657 (1%) Query 11 LILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWTALAALAVT 70 + LLIAPGA++ARI+QL WPVA+AVGPALTYGVVALAIIP+GA+GIPWNGWTALA LAV Sbjct 1 MFLLIAPGAIIARISQLSWPVAVAVGPALTYGVVALAIIPFGAIGIPWNGWTALATLAVV 60 Query 71 CAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRGIP-HWQSIPS 129 C + GLQLLLAR+RD DAEA +VSRWPA+TV AGVLLGALLI WAAYRG+ HWQ+IPS Sbjct 61 CVLMIGLQLLLARYRDRDAEARSVSRWPAITVGAGVLLGALLIMWAAYRGLAAHWQTIPS 120 Query 130 TWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTGAAPTT 189 TWDAVWHAN VRFILDTGQASSTHMGELRNVETH LYYPSVFH L AVFCQLTGAAPTT Sbjct 121 TWDAVWHANEVRFILDTGQASSTHMGELRNVETHKTLYYPSVFHALTAVFCQLTGAAPTT 180 Query 190 GYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAALSASFT 249 GYTLSS+AASVWLFP SAA+LTW +R + EWR AGAA TA ALSASFT Sbjct 181 GYTLSSVAASVWLFPASAAMLTWHLLRPR----------TTEWRCAGAAATAGALSASFT 230 Query 250 AVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITGGIVVA 309 A+PYVEF AAMPNL AYG+AVP VLI STLRHRDRIP AVLA VGV S+HITGG++V Sbjct 231 ALPYVEFGVAAMPNLTAYGVAVPAFVLIASTLRHRDRIPTAVLAWVGVMSVHITGGVIVL 290 Query 310 LLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDIIAGHAFPTYL 369 L + AWWL + + HPVR RLAD L L VAA++GL++LPQF+SV+ QEDIIAGH+F T+L Sbjct 291 LFLVAWWLIDVVWHPVRGRLADFLALFCVAALSGLILLPQFISVQGQEDIIAGHSFLTHL 350 Query 370 SKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLLLIVMNVDAG 429 SKKRGLFDAVFQHSRHLNDFP QY L+ LA +GGL+ KKIWWPLA+WLLL+V+ VDAG Sbjct 351 SKKRGLFDAVFQHSRHLNDFPYQYGLMALAILGGLLFAYKKIWWPLALWLLLVVVEVDAG 410 Query 430 TPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAKRLTDRFR 489 TPLGGP+G VAG GEFFY DPRRI+ A TLLL MAGVALFA V+ LVA AKR+T RF Sbjct 411 TPLGGPVGAVAGMFGEFFYKDPRRISGAITLLLEPMAGVALFAIVVGLVAGAKRVTGRFT 470 Query 490 PQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAMAYLASLPGA 549 P P W SATA LL+ T+++A HYF RH L GDKYDSVMIDQ+DL AMAYLASLPGA Sbjct 471 PLPARFWVSATAVLLVATTVLTARHYFYRHLVLLGDKYDSVMIDQRDLMAMAYLASLPGA 530 Query 550 RDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGESDPRVLEA 609 TLIGNANTDGTAWMYAVA LHPLWTHYDYP Q GPG +R+IFW R G+SDPRV+EA Sbjct 531 HQTLIGNANTDGTAWMYAVADLHPLWTHYDYPQQMGPGPNRYIFWTSARKGDSDPRVVEA 590 Query 610 IQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGTAAATHS 666 I+ L IRYI TSTPTVRGFAVP+GLVSL+ S+SWA IYDNG ARIYEWRG HS Sbjct 591 IKALNIRYIYTSTPTVRGFAVPEGLVSLDKSKSWALIYDNGGARIYEWRGNGTTPHS 647 >gi|254773298|ref|ZP_05214814.1| hypothetical protein MaviaA2_01251 [Mycobacterium avium subsp. avium ATCC 25291] Length=631 Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust. Identities = 484/640 (76%), Positives = 534/640 (84%), Gaps = 11/640 (1%) Query 27 LRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWTALAALAVTCAVATGLQLLLARFRD 86 + WP+A+AVGPALTYG+VALAIIP+GA+GIPWNGWTALAAL V C + TGLQLLLARFRD Sbjct 1 MTWPIAVAVGPALTYGMVALAIIPFGAIGIPWNGWTALAALVVVCLLMTGLQLLLARFRD 60 Query 87 LDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRGIP-HWQSIPSTWDAVWHANTVRFILD 145 DAEA AVSRWPA VAAGVLLGA LI WAAYRG+ HWQ+IPSTWDAVWHAN VRFILD Sbjct 61 RDAEARAVSRWPAAAVAAGVLLGAFLIMWAAYRGLAAHWQTIPSTWDAVWHANEVRFILD 120 Query 146 TGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTGAAPTTGYTLSSLAASVWLFPV 205 TGQASSTHMGELRNVETH LYYPSVFH L+AVFCQLTGAAPTTGYTLSS+AASVWL P Sbjct 121 TGQASSTHMGELRNVETHQMLYYPSVFHALIAVFCQLTGAAPTTGYTLSSVAASVWLVPT 180 Query 206 SAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAALSASFTAVPYVEFDTAAMPNLA 265 SAA+LTWR +R G EWR AGAA TA LSASFTAVPYVEF AAMPNLA Sbjct 181 SAALLTWRLLRPSWG----------EWRTAGAAATAGVLSASFTAVPYVEFGVAAMPNLA 230 Query 266 AYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITGGIVVALLVSAWWLFEALRHPV 325 AYG+A+PT VLITST+RHRDRIP AVLALVGV S+HITGG++V L + AWWL +AL HPV Sbjct 231 AYGVAIPTFVLITSTMRHRDRIPAAVLALVGVMSVHITGGVIVLLFLIAWWLLDALWHPV 290 Query 326 RSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDIIAGHAFPTYLSKKRGLFDAVFQHSRH 385 R RLAD+ L V A++GL++LPQF+SV+QQEDIIAGH+F TYLSKKRGLFDAVFQHSRH Sbjct 291 RGRLADVAALVCVTAISGLILLPQFISVQQQEDIIAGHSFLTYLSKKRGLFDAVFQHSRH 350 Query 386 LNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLLLIVMNVDAGTPLGGPIGGVAGALGE 445 LNDFPVQY LI LAAIG ++LLVKKIWWPLAVWLLL+V+NVDAG PLGGPIG +AGA GE Sbjct 351 LNDFPVQYGLIALAAIGAIVLLVKKIWWPLAVWLLLVVVNVDAGNPLGGPIGALAGAFGE 410 Query 446 FFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAKRLTDRFRPQPVSVWASATATLLI 505 FFY DPRRI+AA TLLL MAG+ALF V VA AKR+ R+RP P VW SATA LL+ Sbjct 411 FFYKDPRRISAAITLLLEPMAGLALFLVVTACVAGAKRIGRRWRPLPAPVWVSATAVLLV 470 Query 506 GATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANTDGTAWM 565 T++SA HY RH LFGDKYDSVMIDQ+DL AMAYLA LPGA +TLIGN NTDGTAWM Sbjct 471 ATTMLSARHYLYRHLVLFGDKYDSVMIDQRDLMAMAYLAKLPGAHETLIGNGNTDGTAWM 530 Query 566 YAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGESDPRVLEAIQVLRIRYILTSTPTV 625 YAVA LHPLWTHYDYP Q GPG +RFIFWAY R G+SDPRV+ AI+ L IRYILTSTPTV Sbjct 531 YAVADLHPLWTHYDYPQQMGPGPNRFIFWAYARRGDSDPRVVAAIKALNIRYILTSTPTV 590 Query 626 RGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGTAAATH 665 RGFAVP+GLVSL+ S+SWA IYDNG ARIYEWR H Sbjct 591 RGFAVPEGLVSLDKSKSWALIYDNGGARIYEWRAEGTTPH 630 >gi|15826949|ref|NP_301212.1| hypothetical protein ML0116 [Mycobacterium leprae TN] gi|221229427|ref|YP_002502843.1| hypothetical protein MLBr_00116 [Mycobacterium leprae Br4923] gi|13092496|emb|CAC29624.1| putative membrane protein [Mycobacterium leprae] gi|219932534|emb|CAR70209.1| putative membrane protein [Mycobacterium leprae Br4923] Length=654 Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/666 (67%), Positives = 522/666 (79%), Gaps = 12/666 (1%) Query 1 VGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG 60 +GL GTLIAL LLI P +VAR A L WP+AIAV PALTYGV+AL IIP+GA+GIPWN Sbjct 1 MGLCCGTLIALFLLIVPETIVARFAALTWPIAIAVSPALTYGVIALVIIPFGAVGIPWNS 60 Query 61 WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG 120 WTALAAL + +LLL R+RD AE +S WPAVTVA GVLLGALLIGWAAYRG Sbjct 61 WTALAALVAVSMLMIAFRLLLVRYRDTAAETRGISGWPAVTVAVGVLLGALLIGWAAYRG 120 Query 121 IPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC 180 + HWQSIPSTWDAVWHANTVRFILDTGQAS THMGELRNVETH+ LYYPSV H L V+C Sbjct 121 LLHWQSIPSTWDAVWHANTVRFILDTGQASPTHMGELRNVETHSVLYYPSVLHALAGVYC 180 Query 181 QLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGT 240 QLTGAAPTTGYT+SSLA +VWLFPVSAA LTW +R + + RAAGA+ T Sbjct 181 QLTGAAPTTGYTVSSLAVAVWLFPVSAATLTWHLLRP----------VTTQKRAAGASAT 230 Query 241 AAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSL 300 AAALSA+FT+VPYVEF AAMPNLAAYG+AVPTMVLITSTLRHRDRIPVA+LALVG FS+ Sbjct 231 AAALSAAFTSVPYVEFGVAAMPNLAAYGVAVPTMVLITSTLRHRDRIPVAILALVGTFSV 290 Query 301 HITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDII 360 H+TGGIVV+L + WWL AL HPVRSR AD TLA V L++ PQF++V Q DII Sbjct 291 HLTGGIVVSLFLLGWWLMNALLHPVRSRAADARTLAAVVMPTALILAPQFIAVLNQADII 350 Query 361 AGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLL 420 AGH+FP++ S K+G+ DA+ H+RHLNDFP+QY L+VLAAIG ILL +KIWWP WL+ Sbjct 351 AGHSFPSFKSVKQGVIDALLLHTRHLNDFPIQYGLVVLAAIGMAILLYQKIWWPSIAWLV 410 Query 421 LIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAA 480 L V V + P GPIG + +FFY+DPRR++A T+LL MAG+ALFA V+LLV Sbjct 411 LTVATVYSAAPFRGPIGSAIESFSQFFYNDPRRLSAVVTMLLTPMAGIALFAGVLLLVVG 470 Query 481 AKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAM 540 A+R+T RF P VW +AT LL+ AT+++AWHY RH LFGDKYDSVM++QKDLDAM Sbjct 471 ARRVTARFTALPRPVWTTATVVLLVAATVLTAWHYLFRHLVLFGDKYDSVMVNQKDLDAM 530 Query 541 AYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNG 600 +YLA+LPGA +T+IGN+NTDG++WMYAVA LHPLWTHYD+P Q GPGY R+ FWAY R G Sbjct 531 SYLATLPGAHNTIIGNSNTDGSSWMYAVADLHPLWTHYDFPQQTGPGYFRYAFWAYARTG 590 Query 601 ESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGT 660 +P V+EA++V IRYILT++PTV+GFA+PDGLVSLE S+SW KIYDNG ARI+EW G Sbjct 591 --NPWVVEAVRVFNIRYILTTSPTVQGFAIPDGLVSLEESKSWTKIYDNGAARIFEWSGN 648 Query 661 AAATHS 666 A AT + Sbjct 649 ATATRA 654 >gi|254822482|ref|ZP_05227483.1| hypothetical protein MintA_21286 [Mycobacterium intracellulare ATCC 13950] Length=623 Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust. Identities = 480/632 (76%), Positives = 530/632 (84%), Gaps = 11/632 (1%) Query 35 VGPALTYGVVALAIIPYGALGIPWNGWTALAALAVTCAVATGLQLLLARFRDLDAEALAV 94 +GPALTYGVVALAIIP+GA+GIPWNGWTALAAL V C V G QLLL R+RD DAE V Sbjct 1 MGPALTYGVVALAIIPFGAIGIPWNGWTALAALVVMCLVMIGFQLLLGRYRDRDAETRRV 60 Query 95 SRWPAVTVAAGVLLGALLIGWAAYRGIP-HWQSIPSTWDAVWHANTVRFILDTGQASSTH 153 RWPA+TVAAGV LGALLI WAAYRG+ HWQ+IPSTWDAVWHAN VRFILDTGQASSTH Sbjct 61 GRWPAITVAAGVALGALLIMWAAYRGLDGHWQTIPSTWDAVWHANEVRFILDTGQASSTH 120 Query 154 MGELRNVETHAPLYYPSVFHGLVAVFCQLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWR 213 MGELRNVETH LYYPSVFH L AVFCQLTGAAPTTGYTLSS+AASVWLFP AA+LTWR Sbjct 121 MGELRNVETHHTLYYPSVFHALTAVFCQLTGAAPTTGYTLSSVAASVWLFPTGAAMLTWR 180 Query 214 AVRSHPGALWSASCASAEWRAAGAAGTAAALSASFTAVPYVEFDTAAMPNLAAYGIAVPT 273 A+R G EWR+AGAA TAA L+ASFTAVPYVEF AAMPNLAAYG AVP Sbjct 181 ALRPSWG----------EWRSAGAAATAATLAASFTAVPYVEFAVAAMPNLAAYGAAVPA 230 Query 274 MVLITSTLRHRDRIPVAVLALVGVFSLHITGGIVVALLVSAWWLFEALRHPVRSRLADLL 333 VLITSTLRHRDRIP AVLALVGV S+HITGG++V LL+ AWWL +AL PVR RLAD+ Sbjct 231 FVLITSTLRHRDRIPAAVLALVGVMSVHITGGVIVLLLLLAWWLLDALWRPVRGRLADVA 290 Query 334 TLAGVAAMAGLVMLPQFLSVRQQEDIIAGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQY 393 LA VA ++GL++LPQF+SV++QEDIIAGH+F TYLSKKRGLFDAVFQHSRHLNDFPVQY Sbjct 291 ALACVAVVSGLILLPQFISVQEQEDIIAGHSFLTYLSKKRGLFDAVFQHSRHLNDFPVQY 350 Query 394 ALIVLAAIGGLILLVKKIWWPLAVWLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRR 453 LI LAAIGG+ILLVK+IWWPLA+WLLLIV+NVDAG P+GGP+G VAG GEFFY DPRR Sbjct 351 GLIALAAIGGVILLVKRIWWPLALWLLLIVVNVDAGNPIGGPVGAVAGMFGEFFYKDPRR 410 Query 454 IAAATTLLLMLMAGVALFATVMLLVAAAKRLTDRFRPQPVSVWASATATLLIGATLVSAW 513 IAAATTLLL MAG+ALFA VM +VA A+RL+DRF+P P VW S TA LL+ T++SA Sbjct 411 IAAATTLLLEPMAGIALFAIVMGVVAGARRLSDRFKPLPAPVWVSVTAVLLVATTVLSAR 470 Query 514 HYFPRHRFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANTDGTAWMYAVAGLHP 573 HY RH +LFGDKYDSVMIDQ+DL AMAYLA LPGAR+TLIGNANTDGTAWMYAVA LHP Sbjct 471 HYLYRHLWLFGDKYDSVMIDQRDLMAMAYLAKLPGARETLIGNANTDGTAWMYAVADLHP 530 Query 574 LWTHYDYPLQQGPGYHRFIFWAYGRNGESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDG 633 LWTHYDYP Q GPG +R+IFW R G+SDPRVLEAI+ L IRYI TS PTVRGFAVPDG Sbjct 531 LWTHYDYPQQMGPGPNRYIFWTSARRGDSDPRVLEAIKALNIRYIYTSAPTVRGFAVPDG 590 Query 634 LVSLETSRSWAKIYDNGEARIYEWRGTAAATH 665 LVSL+ S+SWA IYDNG ARIYEWR + H Sbjct 591 LVSLDKSKSWALIYDNGGARIYEWRPSGTTPH 622 >gi|333992719|ref|YP_004525333.1| transmembrane protein [Mycobacterium sp. JDM601] gi|333488687|gb|AEF38079.1| transmembrane protein [Mycobacterium sp. JDM601] Length=648 Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/657 (63%), Positives = 486/657 (74%), Gaps = 22/657 (3%) Query 10 ALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWTALAALAV 69 AL+LL+APGA++A ++L WP+A+ VGPALTYGVV LAI+P+GALGIPWN TALAAL V Sbjct 4 ALLLLVAPGALIAAGSRLTWPLAVTVGPALTYGVVGLAIVPFGALGIPWNAGTALAALVV 63 Query 70 TCAV----ATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRGIPHWQ 125 A+ A G++ LL R + A + P +TVAAGVLLG LLIGWAA RG+P WQ Sbjct 64 VGALVAGLARGVRGLLDRRPGIHVAAPGTAVGPMLTVAAGVLLGMLLIGWAAVRGLPDWQ 123 Query 126 SIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTGA 185 SIPSTWDAVWHANTVRFILDTGQAS THMGELRNVETHAPLYYPS FH L AV CQLTGA Sbjct 124 SIPSTWDAVWHANTVRFILDTGQASPTHMGELRNVETHAPLYYPSAFHALTAVLCQLTGA 183 Query 186 APTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAALS 245 APTTGYTL+ LAASVWLFP+SAA+LTW ++ + R A +A TA ALS Sbjct 184 APTTGYTLAGLAASVWLFPISAALLTWNLLQR----------VLSTRRLALSAATAGALS 233 Query 246 ASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITGG 305 ASFTA+PYVEF TAAMPNL AYG+ VP L+T HRDRI VAVLALVGVFS+H+TGG Sbjct 234 ASFTALPYVEFGTAAMPNLVAYGLVVPAFALVTGVRTHRDRIGVAVLALVGVFSVHLTGG 293 Query 306 IVVALLVSAWWL--FE-ALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDIIAG 362 +V LL++AWWL F+ AL +P+R + D L LA V GL++LPQ LSVR+Q DIIAG Sbjct 294 VVTVLLLAAWWLGPFDGALWNPLRGKRRDTLALAAVLVPTGLLLLPQLLSVREQADIIAG 353 Query 363 HAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLLLI 422 H+F T+ +K GL DA+ H+RHLNDFPVQY L+ L A+G +LL KK+WWPLA+W +L+ Sbjct 354 HSFLTHEGRKSGLRDALLLHTRHLNDFPVQYTLVGLTAVGAGLLLYKKVWWPLALWAVLV 413 Query 423 VMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAK 482 V V + PLGGP G V G + FY DPRRI AA TLLL+ MAG L V L Sbjct 414 VGVVQSSAPLGGPAGAVIGRFTDLFYSDPRRIMAAMTLLLIPMAGAGLAWLVAFLAEQTP 473 Query 483 RLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAMAY 542 + P+ + ++ AT+ AWHY PRH FLFGDKYDSVM+D +DL A A+ Sbjct 474 K-----PPKWPRFGGFGVCSAVVVATVGLAWHYLPRHAFLFGDKYDSVMVDSRDLAAFAH 528 Query 543 LASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGES 602 LA LPGA D+LIGNAN DG+AWMYAVAGLHPLWTHYDYP QQGPG HRF+FWAY + ++ Sbjct 529 LAELPGAHDSLIGNANVDGSAWMYAVAGLHPLWTHYDYPQQQGPGPHRFVFWAYADDADT 588 Query 603 DPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRG 659 DPRV A++ L IRY+L S+PTVRGF++PDGLVSLE SRSWAKIYDNG A IYEW+G Sbjct 589 DPRVAAAVRALNIRYVLISSPTVRGFSLPDGLVSLEKSRSWAKIYDNGGASIYEWQG 645 >gi|169627310|ref|YP_001700959.1| hypothetical protein MAB_0205c [Mycobacterium abscessus ATCC 19977] gi|169239277|emb|CAM60305.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=662 Score = 565 bits (1456), Expect = 9e-159, Method: Compositional matrix adjust. Identities = 334/663 (51%), Positives = 432/663 (66%), Gaps = 23/663 (3%) Query 5 FGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWTAL 64 FG AL+LL PG ++ R L A PALTYG+V L I+ +G++GIPWN +A Sbjct 5 FGVAAALLLLFIPGWLIGRALGLPTHSAAVTAPALTYGLVGLCIVAFGSIGIPWNSLSAG 64 Query 65 AALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRGIPHW 124 AL +A L L R + + + +R V V GV LG LI +A RG+ HW Sbjct 65 FALVGAVIIARLLWRWLRPKRQAE-QTPSQNRAALVAVTFGVALGMALIFYAFLRGLTHW 123 Query 125 QSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTG 184 QSIPSTWD++WH NT+R+ILDTGQASST MG+LRNVETHA LYYPS FHGL AV CQLTG Sbjct 124 QSIPSTWDSMWHGNTIRYILDTGQASSTRMGDLRNVETHATLYYPSAFHGLAAVLCQLTG 183 Query 185 AAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAAL 244 AAPTT YTL ++A S+ LFP+ +A L W+ +R + A A+ AAAL Sbjct 184 AAPTTSYTLYAVAGSL-LFPLGSAALAWQMLRGRTTRTFQAGAAAT----------AAAL 232 Query 245 SASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITG 304 SASF+A+PYVEF +A+PNL ++ + P ++ ITS + R RIP A+LA GV S+H +G Sbjct 233 SASFSALPYVEFHVSAIPNLMSFALVGPALLAITSVVADRSRIPAAILAFTGVASVHTSG 292 Query 305 GIVVALLVSAWWLFEAL-RHP-----VRSRLADLLTLAGVAAMAGLVML-PQFLSVRQQE 357 IVV + V+AWW+ L R+P + RL T VA + LV+L PQ ++ Q Sbjct 293 AIVVVVFVAAWWVLAPLSRYPGTKSKDKHRLGSGFTPLAVAGVGSLVLLYPQLRTLMQLS 352 Query 358 DIIAGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAV 417 +IIAGH F T KKR L DA+ QH+RHL D+PVQ AL+ LA IG ++L+VK+++WP+AV Sbjct 353 EIIAGHQFTTPWGKKRALLDALTQHTRHLADYPVQSALLGLALIGAVVLIVKRVYWPVAV 412 Query 418 WLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLL 477 WLLL++ V + P GG +G + FY DPRR++A LLL AG+ LFA Sbjct 413 WLLLVIAIVHSSKPFGGFVGHAVALFSDAFYSDPRRLSAIVCLLLAPAAGIGLFALAAAA 472 Query 478 VAAAKRLTDRFRPQPVSVWASATATLLIGATL-VSAWHYFPRHRFLFGDKYDSVMIDQKD 536 +A +R + + S W A +++ A SA HYF H++L G KYD VM+ K Sbjct 473 LATLRRAR---KTRADSRWTLVAAAIVLAAICGFSARHYFLPHKYLVGAKYDQVMVGPKK 529 Query 537 LDAMAYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAY 596 LDA AYLA+LPGA+ T IG+ N DG+ WMYAVAGLHPLWTHYD+P QQGPGYHR+IFWAY Sbjct 530 LDAFAYLATLPGAKTTTIGDGNVDGSGWMYAVAGLHPLWTHYDFPQQQGPGYHRYIFWAY 589 Query 597 GRNGESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYE 656 + ++D RV EA+ L IRY++TSTP V+GF VPDGL SL+ SRSW K+YDNG A+IYE Sbjct 590 ADDADTDRRVTEAVHALNIRYVMTSTPVVQGFKVPDGLRSLDISRSWRKLYDNGAAQIYE 649 Query 657 WRG 659 W G Sbjct 650 WVG 652 >gi|289755912|ref|ZP_06515290.1| LOW QUALITY PROTEIN: transmembrane protein alanine and leucine rich [Mycobacterium tuberculosis EAS054] gi|289696499|gb|EFD63928.1| LOW QUALITY PROTEIN: transmembrane protein alanine and leucine rich [Mycobacterium tuberculosis EAS054] Length=667 Score = 389 bits (1000), Expect = 7e-106, Method: Compositional matrix adjust. Identities = 195/197 (99%), Positives = 196/197 (99%), Gaps = 0/197 (0%) Query 1 VGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG 60 +GLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG Sbjct 1 MGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG 60 Query 61 WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG 120 WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG Sbjct 61 WTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRG 120 Query 121 IPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC 180 IPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC Sbjct 121 IPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC 180 Query 181 QLTGAAPTTGYTLSSLA 197 QLTGAAPTTGYTLSSL Sbjct 181 QLTGAAPTTGYTLSSLG 197 >gi|262200604|ref|YP_003271812.1| hypothetical protein Gbro_0591 [Gordonia bronchialis DSM 43247] gi|262083951|gb|ACY19919.1| hypothetical protein Gbro_0591 [Gordonia bronchialis DSM 43247] Length=683 Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 204/650 (32%), Positives = 322/650 (50%), Gaps = 46/650 (7%) Query 1 VGLWFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG 60 +G W + AL+L++ PGA+V R L WPVA+A GP +T+G+V + + Y +G WN Sbjct 3 LGAWVVVVTALVLIV-PGALVGRRMALPWPVALAAGPPITFGLVGILTVVYAKVGFEWNA 61 Query 61 WTALAALAV--------TCAVATGLQLLLARFRDL-DAEALAVSRWPAVTVAAGVLLGAL 111 +AL L + + A+ T + LA D+ D E A ++ + V AGV +G + Sbjct 62 ISALVGLVLAMLGAWVYSAALGTRIGRRLAPAPDVVDDEKPACAK-AMLRVTAGVAVGGI 120 Query 112 LIGWAAYR-----GIPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPL 166 +I R +I WD++WHA+++R+I +TG S MGEL N +TH Sbjct 121 IIAVTCIRPLVTTAFAGLNNISQVWDSLWHASSLRWIHETGIGSGLRMGELMNYDTHGFN 180 Query 167 YYPSVFHGLVAVFCQLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSAS 226 YYP+ +H L A+ +TGA P Y S A P+ A L A W A Sbjct 181 YYPNTWHALGALLFPITGANPVELYNTYSPAVLAITVPLGVASL----------AYWFAR 230 Query 227 CASAEWRAAGAAGTAAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDR 286 +A AGT AA+SA F ++PYVE + ++PN +A +L +R R R Sbjct 231 HRFDVDTSAVIAGTGAAISALFPSLPYVEVELTSVPNAVGVSLAPVAAILTIGVIRDRRR 290 Query 287 IPVAVLALVGVFSLHITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVM 346 I A LA+ GV + H +G I++A+++ WWL EAL HP RL DL TLA + +++ Sbjct 291 IGPAALAIAGVTATHPSGLILIAVILGLWWLCEALWHPAAGRLRDLATLAVTGVLTLVLI 350 Query 347 LPQF---LSVRQQEDIIAGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGG 403 P ++V D+ +S RGL A F + L D+ +ALI++ A+G Sbjct 351 APVVYGTINVADTNDLPFFDFRVETVSVARGLAQAAFNGTVPLGDYYPAWALIIVTALGL 410 Query 404 LILLVKKIWWPLAVWLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLM 463 ++ + W LA W++ +++ ++ LG + G++G +FY+ P R+ L Sbjct 411 IVFAWMRCWTGLAAWVVFVLVTANSVVSLGA-LSYPLGSIGGYFYNSPHRLTFVVALFSA 469 Query 464 LMAGVALFAT---VMLLVA---AAKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFP 517 AGVA+ + V LV+ +A +D R P V + A LL+G W Y P Sbjct 470 AAAGVAVGSAGIWVARLVSGRLSASESSDSQRFSPAVVSTAVLAVLLVGIAGAGVWKY-P 528 Query 518 RHRFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTH 577 +H L + + DL A +LA P A +++I N GT W+Y V GL P++ Sbjct 529 QHAQLASKERGGKFVGPDDLAAYHWLAGRPDAWNSVILNNLDQGTGWIYPVTGLTPMFPF 588 Query 578 Y---DYPLQQGPGYHRFIFWAYGRNGESDPRVLEAIQVLRIRYILTSTPT 624 Y D+ +Q R +FW G +DP + + ++ +++ Y++ S P+ Sbjct 589 YRANDFSQRQ-----RDLFWGVVDIG-ADPHIDQIVRDMKVHYVIDSPPS 632 >gi|343924263|ref|ZP_08763823.1| hypothetical protein GOALK_005_00140 [Gordonia alkanivorans NBRC 16433] gi|343765832|dbj|GAA10749.1| hypothetical protein GOALK_005_00140 [Gordonia alkanivorans NBRC 16433] Length=710 Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 210/690 (31%), Positives = 327/690 (48%), Gaps = 62/690 (8%) Query 8 LIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWTALAAL 67 +++ ++LI PGA V R L WPVA A GPA+T+ +V++ + Y A+G WN +AL L Sbjct 9 IVSALVLILPGAFVGRRMNLPWPVAFAAGPAITFALVSILTVLYSAVGFEWNAVSALVGL 68 Query 68 AVTCA--------VATGLQLLLARFRDLDAEA----LAVSRWPAVTVAAGVLLGALLIGW 115 + A + TG+ LA E A+ R A G+++ I Sbjct 69 VLALAGAWLYSRLLGTGIGRRLAPVPTDTGEPRVGRTAILRAAAGLGLGGLIIAITCIRP 128 Query 116 AAYRGIPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGL 175 A +I WD++WHA+++R+I +TG S+ MGEL N +T YYP+ +H L Sbjct 129 VAKTAFAGLNNISQVWDSLWHASSLRWIDETGIGSAMRMGELMNYDTQGFNYYPNTWHAL 188 Query 176 VAVFCQLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAA 235 A+ LTGA P Y S A P+ A L A W A +A Sbjct 189 GALLFPLTGANPVELYNTYSPAVLAVTVPLGVASL----------AYWFARHRYDVDNSA 238 Query 236 GAAGTAAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALV 295 AGTAAA++A F ++PYVE ++PN +A VL+ S +R R R+ A LA+ Sbjct 239 LIAGTAAAVAALFPSLPYVEVQLTSVPNAVGVSLAPVAAVLVLSVVRDRSRVAPAALAVA 298 Query 296 GVFSLHITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQ 355 GV + H +G I+V ++V WWL E L P SRLADL TLA A + +++ P + + Sbjct 299 GVTATHPSGLILVGVIVGLWWLCEGLWRPATSRLADLATLAVTAVLTMILIFPVVIGTIR 358 Query 356 QEDIIAGHAFPTYLSKK------RGLFDAVFQHS--RHLNDFPVQYALIVLAAIGGLILL 407 D + P + ++ RGL F + LN FP+ + LI++ +G +L Sbjct 359 VADT---NELPFFDFREEGIGVLRGLAQGAFNGTIPLELNHFPI-WPLIIVTVLGLGVLA 414 Query 408 VKKIWWPLAVWLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAG 467 + W LAVWL+ ++ ++ L G + GA+G +FY+ P R+ + AG Sbjct 415 WLRCWAGLAVWLVFALVTTNSVVSL-GLLSYPLGAIGGYFYNSPHRLTFVVAIFSAAAAG 473 Query 468 VALFATVMLLVAAAKRLTDRF-RPQPVSVWASATATLLIGATLV--------SAWHYFPR 518 VA+ V+ L+ R RF + SV +A A L+ +T V +A +P Sbjct 474 VAIGVAVIALIGVIGR---RFAQSDETSVKGTARAGWLVASTYVVLLALIAGAAVVRYPP 530 Query 519 HRFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHY 578 + + + + DL A A+LAS P A+D L+ N GT W+Y V G+ P++ Y Sbjct 531 NAQIASKERGGKYVGPDDLAAYAWLASQPDAQDVLVLNNLDQGTGWLYPVTGVTPMFPFY 590 Query 579 DYPLQQGPGYHRFIFWAYGRNGESDPRVLEAIQVLRIRYILTSTPTV----RGFAVP--- 631 + R +FW + G +DP + ++ + + Y++ S + RG P Sbjct 591 R--ANEFSERQRDLFWGVAKIG-ADPATDQIVRDMNVHYVIDSPTSYWEFQRGRPDPANG 647 Query 632 -DGLVSLETSRSWA----KIYDNGEARIYE 656 G LE + A +++ GEA +Y Sbjct 648 HQGDPFLELRENGAPGLTEVFRQGEAVVYR 677 >gi|296393692|ref|YP_003658576.1| hypothetical protein Srot_1275 [Segniliparus rotundus DSM 44985] gi|296180839|gb|ADG97745.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length=707 Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 220/704 (32%), Positives = 320/704 (46%), Gaps = 83/704 (11%) Query 17 PGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWTALAALAVTCAVATG 76 PGA +A+ + P A+AVGPA+T GVV + + G W+ A A V A+A Sbjct 18 PGAGLAKAVGMPGPAALAVGPAVTLGVVGITTLWLGFTPFRWSLGVAFAVFFVLWALAA- 76 Query 77 LQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGA-----LLIGWAAYRGIPHWQSIPSTW 131 +R + VS A T+ AGVL+GA + W + +I W Sbjct 77 ---YRSRVWPPISSQRPVSAGSAATMGAGVLIGAGIFSVTCLRWVQLHASRRFDNISQVW 133 Query 132 DAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLT-GAAPTTG 190 DA+WH N +RFI +TG AS GEL N + HA +YP+ +H LVA+ LT G TG Sbjct 134 DALWHVNLIRFIAETGIASPIRTGELINSDNHAAHFYPNAWHALVALAEPLTSGLGLQTG 193 Query 191 ----YTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAALSA 246 Y ++S+ +FP+SAA L W R G W+A A+ AAA SA Sbjct 194 YPQLYNIASVITPAIVFPISAAALAWVLARKKLGERWTACGAA----------AAAAASA 243 Query 247 SFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRD--RIPVAVLALVGVFSLHITG 304 F ++ Y E ++P+ A +A L S++R + R+ +AVLA GV + H + Sbjct 244 LFPSL-YEEEAFGSVPSAMAIALAPVVAALAMSSVRDQSPGRLMIAVLAFAGVTAAHPSA 302 Query 305 GIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDIIAGHA 364 +VVA+L+ WW + P SRL D LA + +++ P L ++ A Sbjct 303 AVVVAVLLVFWWATRLVWFPAASRLRDFAILAAIPVGTAILLAPMALGLKSASS--ETEA 360 Query 365 FPTY-----LSKKRGLFDAVFQHSRHLND-FPVQY------ALIVLAAIGGLILLVKKIW 412 FP Y L+ + SR +++ P ++ L+++AA+G + L+ + W Sbjct 361 FPFYWYDLGLTHAQAALRTAGLLSRTVDEGVPFEHRARLVLPLLLVAAVGLVATLLLRQW 420 Query 413 WPLAVWLLLIVMNVDAGTPLG----------GPI-----GGVAGALGEF----------- 446 W VW L +V+ + P G GP+ G + A F Sbjct 421 WAPLVWALFVVVATNDLVPFGHGACNPYPQCGPLPLRPDGRPSAAWPSFTLPWFLDKASG 480 Query 447 -FYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAKRLTDR-FRPQP-VSVWASATA-T 502 FYHDP R+A TLL GV V AA L DR RP P V WA+ A Sbjct 481 SFYHDPHRLAEVLTLLSAGFFGVG--------VGAALFLADRLLRPAPLVRPWAAPAAFA 532 Query 503 LLIGATLVSAWHYFPRHRFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANTDGT 562 LL+ A LV+A L + D ++ +DL A +LA+ PGA+DT+I N GT Sbjct 533 LLVLAILVAADRVRGERGALASNSRDDRLVGLEDLTAYHWLAAQPGAKDTVILNQLEQGT 592 Query 563 AWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGESDPRVLEAIQVLRIRYILTST 622 WMYA GL P++ HY P ++W + + D RV +A++ LR+RYI S Sbjct 593 GWMYAETGLKPMFAHYRSP--NFSNDQACVYW-FAASAGRDWRVADALRRLRVRYIFESP 649 Query 623 PTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYEWRGTAAATHS 666 P V D L + +Y +G IYE + A + Sbjct 650 PNYWPDHV-DPFTHLIGAPGVLPVYHDGPVTIYELKELATSREQ 692 >gi|317506830|ref|ZP_07964603.1| hypothetical protein HMPREF9336_00973 [Segniliparus rugosus ATCC BAA-974] gi|316254866|gb|EFV14163.1| hypothetical protein HMPREF9336_00973 [Segniliparus rugosus ATCC BAA-974] Length=666 Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 209/680 (31%), Positives = 300/680 (45%), Gaps = 91/680 (13%) Query 39 LTYGVVALAIIPYGALGIPWNGWTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWP 98 +T GVV A + G I WN A A + A A R A +SR Sbjct 1 MTLGVVGFATLWLGFTPIRWNLVAASAVFLLLWAAAA----YRGRVWPPVEPAEPMSRRS 56 Query 99 AVTVAAGVLLGA-----LLIGWAAYRGIPHWQSIPSTWDAVWHANTVRFILDTGQASSTH 153 A T+ +GV +GA + W R + +I WDA+WHAN +RFI +TG AS Sbjct 57 AATIGSGVAIGAGIFSYTCLRWMQLRTSRGFDNISQVWDALWHANLIRFIAETGVASPIR 116 Query 154 MGELRNVETHAPLYYPSVFHGLVAV------FCQLTGAAPTTGYTLSSLAASVWLFPVSA 207 GEL N + H +YP +H LVA+ + P Y ++S+ + P+SA Sbjct 117 TGELINSDNHDGHFYPDAWHALVALGEPAAALLGVRSGYPQL-YNIASVITPAVVLPISA 175 Query 208 AVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAALSASFTAVPYVEFDTAAMPNLAAY 267 A LTW+ R G W+A AS AAA SA F ++ Y E ++P+ A Sbjct 176 AALTWQLARGKLGERWAAYGAS----------AAAAGSALFPSL-YEEEAFGSVPSAVAI 224 Query 268 GIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITGGIVVALLVSAWWLFEALRHPVRS 327 +A VL S +R R R+PVAVLAL GV + H + +VVA L+ WW + L PV + Sbjct 225 ALAPVVAVLAMSCVRDRSRLPVAVLALAGVTAAHPSATVVVAALLMLWWATQLLWSPVAT 284 Query 328 RLADLLTLAGVAAMAGLVMLPQFLSVRQQEDIIAGHAFPTY-----------------LS 370 RL D TLA + A AG ++ P L +R + AFP Y L Sbjct 285 RLKDFATLAAIPAGAGALLAPMALGLRSASN--ETDAFPFYWYDLTLTHAQAALRTAGLV 342 Query 371 KKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLLLIVMNVDAGT 430 + A F+H H + L+ +AA G L L + WW +W L +V+ + Sbjct 343 SRTADESAPFEHRAH-----LMLPLLAVAAAGLLAALWLRQWWAPVLWALFVVVATNDLV 397 Query 431 PLG----------GPI-----GGVAGALGEF------------FYHDPRRIAAATTLLLM 463 P G GP+ G + F FYHDP R+A TLL+ Sbjct 398 PFGPGVCHPYPQCGPLPLHPDGRPSSDWPSFTVPWFLDKASGSFYHDPHRLAEVLTLLVT 457 Query 464 LMAGVALFATVMLLVAAAKRLTDRFRPQPVS-VWASATATLLIGATLVSAWHYFPRHR-F 521 G + A + A+RL RP + WA+ +A L+ A ++ H+ R Sbjct 458 GFFGFGVAAA----LCCAERL---LRPAAFARRWAAPSAFGLVMALILGYGHHMRLERGA 510 Query 522 LFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYP 581 L + ++ +D+ A +LA+ P T++ N GT WMYA AGL P++ HY P Sbjct 511 LASSSRNDWLVGPEDVKAYHWLAARPDVNGTVVLNQLEQGTGWMYAEAGLKPMFAHYRSP 570 Query 582 LQQGPGYHRFIFWAYGRNGESDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSR 641 ++W + + D RV +A++ LR+RY L S P PD V L + Sbjct 571 SFSAD--QACVYW-FAASAGRDWRVADALRRLRVRYALQSPPNYWP-DHPDPFVHLIDAP 626 Query 642 SWAKIYDNGEARIYEWRGTA 661 +Y +G IYE+R A Sbjct 627 GVLPVYHDGPVTIYEFRDLA 646 >gi|319949388|ref|ZP_08023455.1| hypothetical protein ES5_08136 [Dietzia cinnamea P4] gi|319436945|gb|EFV91998.1| hypothetical protein ES5_08136 [Dietzia cinnamea P4] Length=590 Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 177/538 (33%), Positives = 255/538 (48%), Gaps = 17/538 (3%) Query 126 SIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTGA 185 +I WDA WHAN +RFI D G AS G LR E A LYYPS +H + A+ L G Sbjct 30 NIFQGWDAHWHANYIRFIHDVGLASPDQAGALRYPENGATLYYPSTWHAIAALVMGLRGI 89 Query 186 APTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAALS 245 Y L + + +FP+ A L W + A +A AA + Sbjct 90 GAVETYNLVQIGSVALVFPLGVAALAWLITHRR----------FSRPVVATSAAVAALAT 139 Query 246 ASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITGG 305 F +P+VE AA P+ A G+A ++ + L R IP A L LVG+ +H + Sbjct 140 PLFPGLPFVEVMVAATPSAVANGMAGLGAAVVVAALADRRLIPAAALGLVGIGGVHPSAM 199 Query 306 IVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDIIAGHAF 365 + + V WWLF+ L PVR R+ D LAG+ L +LPQ L+V ++ D I+ F Sbjct 200 VTAGVFVLFWWLFDGLWRPVRGRVRDFAVLAGIGLAGVLTLLPQVLTVSEEADDISAFEF 259 Query 366 PTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKIWWPLAVWLLLIVMN 425 + AV RH+ D+ V++ L+ LAA+G L++L +++ WPL +W L+V+ Sbjct 260 EIGADRAATWGKAVALQVRHVEDWGVRWVLLSLAALGLLVMLRRRVVWPLLLWGGLLVVC 319 Query 426 VDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAKRLT 485 V+A + G GGV +G +Y+DPRRI +++ GV + ATV L RL Sbjct 320 VNAMSVFGNWTGGVLRGIGSIYYNDPRRIGVVLAVVVAAAVGVGVGATVQGLAGWLGRLM 379 Query 486 DRF-RPQPVSVWASATATLLIGATLVSAW--HYFPRHRFLFGDKYD-SVMIDQKDLDAMA 541 D P+ V + A L V +W P + G M+DQ DL A Sbjct 380 DPVTDPEGRGVELARVAVALAALVGVGSWVVQASPEYASAAGTSQRWGRMVDQHDLRAFQ 439 Query 542 YLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGE 601 +L+ P A LI +G+ WMYA GL HY P P ++F R GE Sbjct 440 WLSEQPRAYSGLIYTNPDEGSGWMYATHGLPSTARHYLQPGSTAP-LTTYLFSRMDRAGE 498 Query 602 SDPRVLEAIQVLRIRYILTSTPTVRGFAVPDG-LVSLETSRSWAKIYDNGEARIYEWR 658 DPRV +A+ L + Y+ S P GF P+ L+ L T+ +Y + + RI+ R Sbjct 499 -DPRVDQALADLGVTYVYVSPPNYWGFQRPNEHLLDLATTPGLVTVYADSQVRIHAVR 555 >gi|25027131|ref|NP_737185.1| hypothetical protein CE0575 [Corynebacterium efficiens YS-314] gi|259506737|ref|ZP_05749637.1| membrane protein [Corynebacterium efficiens YS-314] gi|23492411|dbj|BAC17385.1| hypothetical protein [Corynebacterium efficiens YS-314] gi|259165678|gb|EEW50232.1| membrane protein [Corynebacterium efficiens YS-314] Length=793 Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 144/509 (29%), Positives = 216/509 (43%), Gaps = 55/509 (10%) Query 131 WDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTGAAPTTG 190 WD WHA+TVRFI +TG ASST MGELRN+ET L+YPS +H + L P Sbjct 166 WDVHWHASTVRFIAETGIASSTRMGELRNIETQQELFYPSAWHAGAFLVADLAELTPNEA 225 Query 191 YTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAALSASFTA 250 L+ + S L P++ A++ WR + + +A+ AG AG A S Sbjct 226 TNLTGIVLSGLLLPLAVALIAWRLINNR--------GLTAQ-IGAGFAGLAVIGSPVLF- 275 Query 251 VPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITGGIVVAL 310 +V A P +AA G + + L S RI A++A +G+F LH + +V L Sbjct 276 --WVGNYVGAWPYVAAIGASGVVLALFMSLPYAPVRILAALVAFIGMFQLHPSAVTIVVL 333 Query 311 LVSAWWLFEALRHPVRS----------RLADLLTLAGVAAMAGLVMLPQFLSVRQQEDII 360 + WWL L P R+ RL D+ LA L++LPQ LS +Q + + Sbjct 334 ALVLWWLTHLLWKPSRASDTFARGALVRLRDVGILAITGIAGALLVLPQVLSGAEQTEDV 393 Query 361 AGHAFPTYLSKKRGLFDAVFQHSRHLNDFP--VQYALIVLAAIGGLILLVKKI--WWPLA 416 ++ +++ A+ +RH++ F L+V AAIGG++ LV +I W PL Sbjct 394 LSYSAEVDVTRTESWIRALTMDTRHVDSFGDIDLTPLLVFAAIGGVVALVWRINLWAPL- 452 Query 417 VWLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVML 476 + + + + V++ P G P G G +G Y R+ L AG+ L A + L Sbjct 453 FYFISLALTVNSLKPFGEPWGDWLGIIGGLHYSTGHRLIMPVALFTFAAAGIGLAAVIRL 512 Query 477 LVAAAKRLTDR-----------FRPQPVSVWASATATLLIGATLVSAWHYFPRHRFLFGD 525 + + R P+ WA LV F Sbjct 513 ICLGPVKQFARVSAAASVVLALVVAVPLQSWAR---------DLVEE-----GSEFSILA 558 Query 526 KYDSVMIDQKDLDAMAYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQG 585 +D M++ D A +L PG R+ + DG WMYA GL + HY +P Sbjct 559 PHDDRMVNDADRAAWDWLIEQPGGRELRVMGDPADGHGWMYAYNGLQSVSRHYAWPAAGE 618 Query 586 PGYHRFIFW---AYGRNGESDPRVLEAIQ 611 +FW G + DP + + Sbjct 619 GTATALLFWWPQLLGAGNDGDPDQINDVD 647 >gi|227541768|ref|ZP_03971817.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227182474|gb|EEI63446.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] Length=763 Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 157/560 (29%), Positives = 247/560 (45%), Gaps = 52/560 (9%) Query 91 ALAVSRWPAVTVAAGVLLGALLIGWAAYRGIPH-W---QSIPSTWDAVWHANTVRFILDT 146 +++ RW + AAGV+ GA I ++ I W +++ WDA WHA+ VRFI +T Sbjct 97 SISDQRW--LLPAAGVIAGAYFIMSRSFAVIERSWGGLENVYQGWDAHWHASVVRFIGET 154 Query 147 GQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTGAAPTTGYTLSSLAASVWLFPVS 206 G AS T MG L+N ET PLYYP+ +H + Q +P ++S+ + LFP+S Sbjct 155 GIASPTEMGILQNAETGHPLYYPTAWHATAYLIGQFADLSPIAALNVTSVVLAGALFPIS 214 Query 207 AAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAALSASFTAVPYVEFDTAAMPNLAA 266 AA L WR V + + AAG AA L + ++ + A P L+A Sbjct 215 AAALAWRVV------------GTRGVTSQLAAGFAAVLVGVVPVLFWIGYYVGAWPYLSA 262 Query 267 ---YGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITGGIVVALLVSAWWLFEALRH 323 GI V + + + + R LA G+ H V + + WWL + + Sbjct 263 VAMIGIVVSAFMSVPAVPK---RAFATALAFAGLVQTHPAPATHVVIFLLLWWLTKLVWK 319 Query 324 PVRS----------RLADLLTLAGVAAMAGLVMLPQFLSVRQQEDIIAGHAFPTYLSKKR 373 P + RL DL LA L++LPQ ++ Q + + LS + Sbjct 320 PSHTPRSWQQGVGFRLRDLGLLALTGVAGALILLPQIIAGSSQTEDVVNFDDAESLSMAK 379 Query 374 GLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLV---KKIWWPLAVWLLLIVMNVDAGT 430 A +RH N+ ++ + G+++++ +W PLA +L +V+ V++ Sbjct 380 AWETAFNLATRHTNEIGFDSLPLLWVGLAGMVIVLVWRGNLWGPLA-YLFSLVVTVNSMH 438 Query 431 PLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAKRLTDRFRP 490 P G G +G Y+ R+ LLL+ A A+ V L+ R R Sbjct 439 PFTGAWGDAFTFIGGLHYNGTHRLIMPVALLLVAYASAAIAVVVRLVCLGPVR-----RL 493 Query 491 QPVSVWASATATLLIGATLVSAWHYFPRHRFLF--GDKYDSVMIDQKDLDAMAYLASLPG 548 +SV S L++GA L A + + + D M+++ DL A +LA+ PG Sbjct 494 SMLSVVLSTIVGLIVGAALWVAVDNRTEGKLDWPIANSRDQRMVNKYDLKAWRWLANQPG 553 Query 549 ARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWA---YGRNGESDP- 604 A + I + DG+ WMYA GL +THY++P +++ G DP Sbjct 554 AYEHRIFSDPADGSGWMYAYNGLPAFYTHYNWPYALSDSDTTMLYFHPNLLGVGNFGDPM 613 Query 605 ---RVLEAIQVLRIRYILTS 621 V EA + L I YI+TS Sbjct 614 LRNTVDEAAKNLDINYIITS 633 >gi|227487068|ref|ZP_03917384.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227093142|gb|EEI28454.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] Length=798 Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 155/557 (28%), Positives = 244/557 (44%), Gaps = 46/557 (8%) Query 91 ALAVSRWPAVTVAAGVLLGALLIGWAAYRGIPH-W---QSIPSTWDAVWHANTVRFILDT 146 +++ RW + AAGV+ GA I ++ I W +++ WDA WHA+ VRFI +T Sbjct 132 SISDQRW--LLPAAGVIAGAYFIMSRSFAVIERSWGGLENVYQGWDAHWHASVVRFIGET 189 Query 147 GQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTGAAPTTGYTLSSLAASVWLFPVS 206 G AS T MG L+N ET PLYYP+ +H + Q +P ++S+ + LFP+S Sbjct 190 GIASPTEMGILQNAETGHPLYYPTAWHSTAYLIGQFADLSPIAALNVTSVVLAGALFPIS 249 Query 207 AAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAALSASFTAVPYVEFDTAAMPNLAA 266 AA L WR V + + AAG AA L + ++ + A P L+A Sbjct 250 AAALAWRVV------------GTRGVTSQLAAGFAAVLVGVVPVLFWIGYYVGAWPYLSA 297 Query 267 YGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITGGIVVALLVSAWWLFEAL----- 321 + + S R LA G+ H V + + WWL + + Sbjct 298 VAMIGIVISAFMSVPAVPKRAFATALAFAGLVQTHPAPATHVVIFLLLWWLTKLVWKPSH 357 Query 322 -----RHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDIIAGHAFPTYLSKKRGLF 376 R V RL DL LA L++LPQ ++ Q + + LS + Sbjct 358 TPRSWRQGVGFRLRDLGLLALTGVAGALILLPQIIAGSSQTEDVVNFDDAESLSMAKAWE 417 Query 377 DAVFQHSRHLNDFPVQYALIVLAAIGGLILLV---KKIWWPLAVWLLLIVMNVDAGTPLG 433 A +RH ++ ++ + G+++++ +W PLA +L +V+ V++ P Sbjct 418 TAFNLATRHTDEIGFDSLPLLWVGLAGMVIVLVWRGNLWGPLA-YLFSLVVTVNSMHPFT 476 Query 434 GPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAKRLTDRFRPQPV 493 G G +G Y+ R+ LLL+ AG A+ V ++ R R + Sbjct 477 GAWGDAFTFIGGLHYNGTHRLIMPVALLLVAYAGAAIAVVVRVVCLGPVR-----RLSML 531 Query 494 SVWASATATLLIGATLVSAWHYFPRHRFLF--GDKYDSVMIDQKDLDAMAYLASLPGARD 551 SV S L++GA L A + + + D M+++ DL A +LA+ PGA + Sbjct 532 SVVLSTIVGLIVGAALWVAVDNRTEGKLDWPIANSRDQRMVNKYDLKAWRWLANQPGAYE 591 Query 552 TLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWA---YGRNGESDP---- 604 I + DG+ WMYA GL +THY++P +++ G DP Sbjct 592 HRIFSDPADGSGWMYAYNGLPAFYTHYNWPYALSDSDTTMLYFHPNLLGVGNFGDPMLRN 651 Query 605 RVLEAIQVLRIRYILTS 621 V EA + L I YI+TS Sbjct 652 TVDEAAKNLDINYIITS 668 >gi|300779793|ref|ZP_07089649.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] gi|300533903|gb|EFK54962.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] Length=745 Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 179/660 (28%), Positives = 287/660 (44%), Gaps = 62/660 (9%) Query 9 IALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWTALAALA 68 +A+ + PG +V+ +A + P A A T+G++ GALGI + + + L Sbjct 9 LAIAVFTLPGLIVSWVAGAKLPAAAAASLPATFGLIGFGSWLLGALGIRFGWPSFIFFLV 68 Query 69 VTCAVATGLQLLLARFRDLD-AEALAVSRWPA------------VTVAAGVLLGA-LLIG 114 + A+A + + AR D AE + WP V AGV GA +LI Sbjct 69 LVLALAGVWRFMFARKAKRDGAETWVRALWPGDWRRRSILDPLWVLPGAGVTAGAWMLIA 128 Query 115 --WAAYRGIPH-WQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSV 171 +PH ++I WD WHAN VRFI++ G AS T MGEL++ ETH L+YPS Sbjct 129 KMLELQDNVPHKMENIVQGWDTQWHANAVRFIMEEGVASPTRMGELQSPETHVDLFYPSG 188 Query 172 FHGLVAVFCQLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAE 231 FH A+F G P L+S+ A+ AA L W R G + Sbjct 189 FHAATALFAHAGGWEPVPAMNLASIVATSLAVAGGAAGLAWAIARGQ-GMV--------- 238 Query 232 WRAAGAAGTAAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAV 291 A AAG A + +V ++ P + + G++ + L R+R + Sbjct 239 --AQIAAGLAPIAIYASPSVVWISDYVGMRPYIVSIGLSGIVVALFMQVPRYRALSFATL 296 Query 292 LALVGVFSLHITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFL 351 A +GV +H VV L V +W + P RSR++D+L LA A L LPQ L Sbjct 297 FAFLGVLQVHPAAVTVVVLAVLLYWATYLVWRPDRSRVSDVLWLAIPALGGTLSFLPQLL 356 Query 352 SVRQQEDIIAGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQY---ALIVLAAIGGLILLV 408 + R Q + + ++ A + +RH +F + L LA G + +L+ Sbjct 357 AGRTQAEEVQAWDNREAVTSTEAWHRAFYMQARHTEEFFPTFDPTMLFWLAGFGAIAMLL 416 Query 409 --KKIWWPLAVWLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAA--ATTLLLML 464 ++W P+ + L++ +A P+ + LG Y+ R+A A TL Sbjct 417 WRGQVWAPI-FYGLMVSTTANAMRPVDNLFEPLLAFLGSAHYNSAHRVATIVALTLFAGA 475 Query 465 MAGVALFATVMLLVAAAKRLTDRFRPQPVSVWASATATLLIGATLVSAW---------HY 515 G A+ V+ L A R RP+ W +A A+ ++ + W Sbjct 476 AVGAAVIIRVLCLAPVAVR-----RPKRPWQWGTAIASAVLAG--FTGWGTGVWAATAAA 528 Query 516 FPRHRFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLW 575 + D MID+ L+A +LAS P A++ L+ +T+G +W+Y++ G+ + Sbjct 529 EGAKESYEASRVDDRMIDEDQLEAFEWLASRPEAQEGLVMGESTEGYSWIYSIEGVPTVS 588 Query 576 THYDYPLQQGPGYHRFIFWAY------GRNGESDP-RVLEAIQV-LRIRYILTSTPTVRG 627 HY +P G G + I + G+ G+ D V++A L +R+I+++ T G Sbjct 589 RHYLWP-SGGLGTNSSILSDHAALLGAGQRGKPDEGNVVDAAAAHLDVRFIISTGNTFWG 647 >gi|145294738|ref|YP_001137559.1| hypothetical protein cgR_0686 [Corynebacterium glutamicum R] gi|140844658|dbj|BAF53657.1| hypothetical protein [Corynebacterium glutamicum R] Length=799 Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 142/546 (27%), Positives = 223/546 (41%), Gaps = 72/546 (13%) Query 126 SIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTGA 185 I WD WHA+TVRFI +TG ASST MG+LRN+ET L+YPS +H V + Sbjct 183 DIVQGWDVHWHASTVRFIDETGIASSTMMGQLRNIETQQDLFYPSAWHAGAWVLSDVGNL 242 Query 186 APTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAALS 245 L+ + S L P++ A++ WR + + A AG A ++ Sbjct 243 TIVEATNLTGIVLSGLLLPLAVALIAWRMINNR------------GLTAQIGAGFAGLIT 290 Query 246 ASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITGG 305 + + +V A P +AA G + + L ST RI A LA +G+F LH Sbjct 291 IASPVLFWVGNYVGAWPYVAAIGASGVVLALFMSTPSMPVRIFAAALAFMGMFQLHPAPS 350 Query 306 IVVALLVSAWWLFEALRHPVRS----------RLADLLTLAGVAAMAGLVMLPQFLSVRQ 355 +V +++ WWL + + P R RL D+ LA + L MLPQ +S + Sbjct 351 TIVIMVLLLWWLLKLVVVPSRKVKGWKAGIGIRLKDVGILAITGIIGVLFMLPQVISGSE 410 Query 356 QEDIIAGHAFPTYLSKKRGLFDAVFQHSRHLNDF------PVQYALIVLAAIGGLILLV- 408 Q + + ++ +++ ++F +RH++ F PV +V AAIGG++ LV Sbjct 411 QTEDVLSYSAEEQVTRSESWLVSIFMETRHVDFFGNIDIVPV----LVFAAIGGVVALVW 466 Query 409 -KKIWWPLAVWLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLL------ 461 +W P+ + + + ++ P P G +G Y R+ + Sbjct 467 RGNLWAPV-FYFASVALTANSLKPFEEPWGDWLNIVGGLHYSTGHRLIMPVAMFTFAAAG 525 Query 462 --------LMLMAGVALFATVMLLVAAAKRLTDRFRPQPVSVWASATATLLIGATLVSAW 513 L+ + + FATV + P+ WA T+++ Sbjct 526 IGAAAVIRLICLGPIKKFATVS---GVVSVVMALVVAVPLQTWAKDFVEEGSETTILA-- 580 Query 514 HYFPRHRFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANTDGTAWMYAVAGLHP 573 P + D M+ DL A +L PG D I DG WMYA GLH Sbjct 581 ---PHN--------DERMVSNNDLAAWDWLIQQPGGADMNIMGDPADGNGWMYAYNGLHS 629 Query 574 LWTHYDYPLQQGPGYHRFIFW-------AYGRNGESDPRVLEAIQVLRIRYILTSTPTVR 626 + HY +P +FW N + V +A + L + Y + S T Sbjct 630 VARHYAWPAAGEGSATAMLFWWPQLLGVGTDENPDQVNDVDQAARDLNVGYFMISPWTFW 689 Query 627 GFAVPD 632 F +P+ Sbjct 690 DFQIPN 695 >gi|305679879|ref|ZP_07402689.1| putative membrane protein [Corynebacterium matruchotii ATCC 14266] gi|305660499|gb|EFM49996.1| putative membrane protein [Corynebacterium matruchotii ATCC 14266] Length=931 Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 172/645 (27%), Positives = 247/645 (39%), Gaps = 111/645 (17%) Query 99 AVTVAAGVLLGALLIGWAAYRGIPH-WQSIPSTWDAVWHANTVRFILDTGQASSTHMGEL 157 V V AG LL Y+G+ + + SI WD WHA+ VRFIL+ G A ST MGE Sbjct 176 GVIVGAGTYTSRLL---EIYQGLKYDFSSIVQGWDVHWHASEVRFILERGIADSTRMGEA 232 Query 158 RNVETHAPLYYPSVFHGLVAVFCQLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRS 217 N++ H L+YPS +H A+ + G P ++ P+S ++ WR V Sbjct 233 HNIDGHQELFYPSGWHAATALLARYEGFTPIQAINWMTIVLPSVTIPLSVGLIAWRLV-- 290 Query 218 HPGALWSASCASAEWRAAGAAGTAAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLI 277 + A AAG +AA+ + + ++ P L A + VLI Sbjct 291 ----------GNRGLTAQIAAGFSAAIVIATPVLYWIPVYVGMWPYLGAISMTGIVAVLI 340 Query 278 TSTLRHRDRIPVAVLALVGVFSLHITGGIVVALLVSAWWLF------------------- 318 TS R+ V+ +GV H VV LV WWLF Sbjct 341 TSIPAVPVRMFAGVMGFMGVAIAHPAPITVVVFLVGFWWLFGQLWHPVRQWWTPADSIPA 400 Query 319 --------------------------EALRHPVRS-----------------------RL 329 E +HP R RL Sbjct 401 EDSTTPDTTTAKPDQDSESESTQPKLEEQKHPARKPRQVGARIWSDWRTNKWAAGTMARL 460 Query 330 ADLLTLAGVAAMAGLVMLPQFLS-VRQQEDIIAGHAFPTYLSKKRGLFDAVFQHSRHLND 388 D LA +A L++ PQ S Q ED+ + AF LS+K +RH+ + Sbjct 461 RDFGLLAATGGIAVLLLWPQLKSGFGQSEDVQSVTAFED-LSRKETFIKTFLMRTRHVGE 519 Query 389 FPVQ--YALIVLAAIGGLILLVKKIWWPLAVWLLLIVM-----NVDAGTPLGGPIGGVAG 441 F + L+ A IG ++ LV W VW +L ++ ++A T P GG+ Sbjct 520 FGLTDWTYLLWFAVIGMVVALV----WRRNVWGILFLIFSALITMNALTMFPEPWGGLLN 575 Query 442 ALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAKRLTDRFRPQPVSVWASATA 501 +G Y R+ + L GV + A V+ V A +R SV S A Sbjct 576 IIGGLHYGTAHRLVIPVAMFLFAYCGVGV-AVVIRFVFAGFVRNKIWRV--ASVCLSTIA 632 Query 502 TLLIGATLVSAWHYFPRH--RFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANT 559 + I + +V Y R R+ Y+S M+ + D DA +LA P A D +I + Sbjct 633 AVWITSLIVPWASYSVREGSRWAIESMYESRMVTKDDRDAFNWLAKQPHAYDGIIFGNSA 692 Query 560 DGTAWMYAVAGLHPLWTHYD-YPLQQGPGYHRFIFWAY----GRNGESDPRVLEAI--QV 612 DG WMYA L L HYD + G H AY G +G+ D R I + Sbjct 693 DGYGWMYAYNKLPSLARHYDGVSAKPGAPSHVLRDSAYLIGAGNHGDPDQRNKADIAAEN 752 Query 613 LRIRYILTSTPTVRGFAVP--DGLVSLETSRSWAKIYDNGEARIY 655 L + +I+ S P F + V L+ + +Y RIY Sbjct 753 LGVNFIVLSPPNFWWFQQSNLEMSVKLDKAPGLTLVYQKNSIRIY 797 >gi|344045899|gb|EGV41568.1| hypothetical protein CgS9114_02128 [Corynebacterium glutamicum S9114] Length=799 Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 142/546 (27%), Positives = 223/546 (41%), Gaps = 72/546 (13%) Query 126 SIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTGA 185 I WD WHA+TVRFI +TG ASST MG+LRN+ET L+YPS +H V + Sbjct 183 DIVQGWDVHWHASTVRFIDETGIASSTMMGQLRNIETQQDLFYPSAWHAGAWVLSDVGNL 242 Query 186 APTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAALS 245 L+ + S L P++ A++ WR + + A AG A ++ Sbjct 243 TIVEATNLTGIVLSGLLLPLAVALIAWRMINNR------------GLTAQIGAGFAGLIT 290 Query 246 ASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITGG 305 + + +V A P +AA G + + L ST RI A LA +G+F LH Sbjct 291 IASPVLFWVGNYVGAWPYVAAIGASGVVLALFMSTPSVPVRIFAAALAFMGMFQLHPAPS 350 Query 306 IVVALLVSAWWLFEALRHPVRS----------RLADLLTLAGVAAMAGLVMLPQFLSVRQ 355 +V +++ WWL + + P R RL D+ LA + L MLPQ +S + Sbjct 351 TIVIMVLLLWWLLKLVVVPSRKVKGWKAGIGIRLKDVGILAITGIIGVLFMLPQVISGSE 410 Query 356 QEDIIAGHAFPTYLSKKRGLFDAVFQHSRHLNDF------PVQYALIVLAAIGGLILLV- 408 Q + + ++ +++ ++F +RH++ F PV +V AAIGG++ LV Sbjct 411 QTEDVLSYSAEEQVTRSESWLVSIFMETRHVDFFGNIDIVPV----LVFAAIGGVVALVW 466 Query 409 -KKIWWPLAVWLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLL------ 461 +W P+ + + + ++ P P G +G Y R+ + Sbjct 467 RGNLWAPV-FYFASVALTANSLKPFEEPWGDWLNIVGGLHYSTGHRLIMPVAMFTFAAAG 525 Query 462 --------LMLMAGVALFATVMLLVAAAKRLTDRFRPQPVSVWASATATLLIGATLVSAW 513 L+ + + FATV + P+ WA T+++ Sbjct 526 IGAAAVIRLICLGPIKKFATVS---GVVSVVMALVVAVPLQTWAKDFVEEGSETTILA-- 580 Query 514 HYFPRHRFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANTDGTAWMYAVAGLHP 573 P + D M+ DL A +L PG D I DG WMYA GLH Sbjct 581 ---PHN--------DERMVSNNDLAAWDWLIQQPGGADMNIMGDPADGNGWMYAYNGLHS 629 Query 574 LWTHYDYPLQQGPGYHRFIFW-------AYGRNGESDPRVLEAIQVLRIRYILTSTPTVR 626 + HY +P +FW N + V +A + L + Y + S T Sbjct 630 VARHYAWPAAGEGSATAMLFWWPQLLGVGTDENPDQVNDVDQAARDLNVGYFMISPWTFW 689 Query 627 GFAVPD 632 F +P+ Sbjct 690 DFQIPN 695 >gi|225020489|ref|ZP_03709681.1| hypothetical protein CORMATOL_00496 [Corynebacterium matruchotii ATCC 33806] gi|224946878|gb|EEG28087.1| hypothetical protein CORMATOL_00496 [Corynebacterium matruchotii ATCC 33806] Length=924 Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 171/645 (27%), Positives = 247/645 (39%), Gaps = 111/645 (17%) Query 99 AVTVAAGVLLGALLIGWAAYRGIPH-WQSIPSTWDAVWHANTVRFILDTGQASSTHMGEL 157 V V AG LL Y+G+ + + SI WD WHA+ VRFIL+ G A ST MGE Sbjct 169 GVIVGAGTYTSRLL---EIYQGLKYDFSSIVQGWDVHWHASEVRFILERGIADSTRMGEA 225 Query 158 RNVETHAPLYYPSVFHGLVAVFCQLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRS 217 N++ H L+YPS +H A+ + G P ++ P+S ++ WR V Sbjct 226 HNIDGHQELFYPSGWHAATALLARYEGFTPIQAINWMTIVLPSVTIPLSVGLIAWRLV-- 283 Query 218 HPGALWSASCASAEWRAAGAAGTAAALSASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLI 277 + A AAG +AA+ + + ++ P L A + VLI Sbjct 284 ----------GNRGLTAQIAAGFSAAIVIATPVLYWIPVYVGMWPYLGAISMTGIVAVLI 333 Query 278 TSTLRHRDRIPVAVLALVGVFSLHITGGIVVALLVSAWWLF------------------- 318 TS R+ V+ +GV H VV LV WWLF Sbjct 334 TSIPTVPVRMFAGVMGFMGVAIAHPAPITVVVFLVGFWWLFGQLWHPVCQWWTPADSIPA 393 Query 319 --------------------------EALRHPVRS-----------------------RL 329 E +HP R RL Sbjct 394 EDSTTPDTTTAKPDQDSESESAQPKPEEQKHPARKPRQVGARIWSDWRTNKWAAGTMARL 453 Query 330 ADLLTLAGVAAMAGLVMLPQFLS-VRQQEDIIAGHAFPTYLSKKRGLFDAVFQHSRHLND 388 D LA +A L++ PQ S Q ED+ + AF LS++ +RH+ + Sbjct 454 RDFGLLAATGGIAVLLLWPQLKSGFGQSEDVQSVTAFED-LSRRETFIKTFLMRTRHVGE 512 Query 389 FPVQ--YALIVLAAIGGLILLVKKIWWPLAVWLLLIVM-----NVDAGTPLGGPIGGVAG 441 F + L+ A IG ++ LV W VW +L ++ ++A T P GG+ Sbjct 513 FGLTDWTYLLWFAVIGMVVALV----WRRNVWGMLFLIFSALITMNALTMFPEPWGGLLN 568 Query 442 ALGEFFYHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAKRLTDRFRPQPVSVWASATA 501 +G Y R+ + L GV + A V+ V A +R SV S A Sbjct 569 IIGGLHYGTAHRLVIPVAMFLFAYCGVGV-AVVIRFVFAGFVRNKIWRV--ASVCLSTIA 625 Query 502 TLLIGATLVSAWHYFPRH--RFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANT 559 + I + +V Y R R+ Y+S M+ + D DA +LA P A D +I + Sbjct 626 AVWITSLIVPWASYSVREGSRWAIESMYESRMVTKDDRDAFNWLAKQPHAYDGIIFGNSA 685 Query 560 DGTAWMYAVAGLHPLWTHYD-YPLQQGPGYHRFIFWAY----GRNGESDPRVLEAI--QV 612 DG WMYA L L HYD + G H AY G +G+ D R I + Sbjct 686 DGYGWMYAYNKLPSLARHYDGVSAKPGAPSHVLRDSAYLIGAGNHGDPDQRNKADIAAEN 745 Query 613 LRIRYILTSTPTVRGFAVP--DGLVSLETSRSWAKIYDNGEARIY 655 L + +I+ S P F + V L+ + +Y RIY Sbjct 746 LGVNFIVLSPPNFWWFQQSNLEMSVKLDKAPGLTLVYQKNSIRIY 790 >gi|334564205|ref|ZP_08517196.1| hypothetical protein CbovD2_06481 [Corynebacterium bovis DSM 20582] Length=909 Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 157/577 (28%), Positives = 252/577 (44%), Gaps = 65/577 (11%) Query 125 QSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTG 184 ++I WD WHA+ +R+I+DTG A S MG L+NVET LYYP+ +H + AV+ +TG Sbjct 258 ENIYQGWDVHWHASVIRYIMDTGLAGSDTMGPLQNVETGKALYYPTGWHAMGAVYQAVTG 317 Query 185 AAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAAL 244 +P ++ + P +AA L W AV + + AA + Sbjct 318 LSPVATVNITGIVLPSLCIPATAAFLGWLAVGKRGTGAATTAG------------LAAVI 365 Query 245 SASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITG 304 V ++ + A P LA G+ + L I A LA G +H + Sbjct 366 VTGLLPVYFISYYVGAWPYLAGMGMVGIVVALFAVVPARPVAILPAALAFAGAGVMHPSV 425 Query 305 GIVVALLVSAWWLFEALRHP------------------VRSRLADLLTLAGVAAMAGLVM 346 VV +LV AWWL L P V R+ D++ LA A +A +++ Sbjct 426 ATVVVMLVGAWWLLWRLWAPALRPGESVWGVTGRWSRAVVVRIRDVVYLAAAALIAAVIL 485 Query 347 LPQFLS-VRQQEDIIAGHAFPTYLSKKR-GLFDAVFQ-HSRHLNDFPVQYALIVLAAIGG 403 +PQ+L+ + Q E++ AF R G + V + SRH DF V + ++ AA+G Sbjct 486 VPQWLAGLGQAEEV---DAFSDVQPVDRLGSWKLVLELQSRHAIDFGVPWVVLWAAAVGM 542 Query 404 LILLV--KKIWWPLAVWLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLL 461 ++LLV + +W P+A +LL V+ V + G +G ++ A+G Y+ R+ LL Sbjct 543 IVLLVWRRALWVPVA-YLLFAVVAVHSVKNFDGVVGDLSRAVGSMHYNTTHRLIVPVALL 601 Query 462 LMLMAGVALFATVMLLVAAAKRLTDRFRPQPVSVWASATATLL---IGATLVSAWHYFPR 518 + A A+ + + R R + V+ S TA +L +GA +V A R Sbjct 602 TAVAAAAAVAGVIRAITGGLLTRVFRRRHRGVAAAGSVTAVVLALAVGAGVVGAQE---R 658 Query 519 H----RFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANTDGTAWMYAVAGLHPL 574 H + G + +I ++ A +L + P A D LI +GT WMY + L L Sbjct 659 HDDGWDWSLGASREPRVITDSEMGAFRWLTTAPKAYDGLIAGNPAEGTGWMYPLYDLPSL 718 Query 575 WTHYDYPLQQGPGYHRFIFWAYGRNGESDP-------------RVLE-AIQVLRIRYILT 620 H+ +P +FW G P V + A + L + Y ++ Sbjct 719 HRHFLWPTVPEDSATNMVFWHPDLFGSGLPPEHPGGAPRPGYANVADFAARDLGVNYYIS 778 Query 621 STPTVRGFA--VPDGLVSLETSRSWAKIYDNGEARIY 655 S P+ GF +P+ + L T+ +Y +G +Y Sbjct 779 SPPSFFGFQKDIPEQVEGLMTAPGTTPVYKDGRTVVY 815 >gi|19551802|ref|NP_599804.1| hypothetical protein NCgl0543 [Corynebacterium glutamicum ATCC 13032] gi|21323333|dbj|BAB97961.1| Hypothetical membrane protein [Corynebacterium glutamicum ATCC 13032] Length=799 Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 140/543 (26%), Positives = 223/543 (42%), Gaps = 66/543 (12%) Query 126 SIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTGA 185 I WD WHA+TVRFI +TG ASST MG+LRN+ET L+YPS +H V + Sbjct 183 DIVQGWDVHWHASTVRFIDETGIASSTMMGQLRNIETQQDLFYPSAWHAGAWVLSDVGNL 242 Query 186 APTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAALS 245 L+ + S L P++ A++ WR + + A AG A ++ Sbjct 243 TIVEATNLTGIVLSGLLLPLAVALIAWRMINNR------------GLTAQIGAGFAGLIT 290 Query 246 ASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITGG 305 + + +V A P +AA G + + L ST RI A LA +G+F LH Sbjct 291 IASPVLFWVGNYVGAWPYVAAIGASGVVLALFMSTPSVPVRIFAAALAFMGMFQLHPAPS 350 Query 306 IVVALLVSAWWLFEALRHPVRS----------RLADLLTLAGVAAMAGLVMLPQFLSVRQ 355 +V +++ WWL + + P + RL D+ LA + L MLPQ +S + Sbjct 351 TIVIMVLLLWWLLKLVVVPSQKVKGWKAGIGIRLKDVGILAITGIIGVLFMLPQVISGSE 410 Query 356 QEDIIAGHAFPTYLSKKRGLFDAVFQHSRHLNDF------PVQYALIVLAAIGGLILLV- 408 Q + + ++ +++ ++F +RH++ F PV +V AAIGG++ LV Sbjct 411 QTEDVLSYSAEEQVTRSESWLVSIFMETRHVDFFGNIDIVPV----LVFAAIGGVVALVW 466 Query 409 -KKIWWPLAVWLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAG 467 +W P+ + + + ++ P P G +G Y R+ + AG Sbjct 467 RGNLWAPV-FYFASVALTANSLKPFEEPWGDWLNIVGGLHYSTGHRLIMPVAMFTFAAAG 525 Query 468 VALFATVMLLVAAAKR-----------LTDRFRPQPVSVWASATATLLIGATLVSAWHYF 516 + A + L+ + + P+ WA T+++ Sbjct 526 IGAAAVIRLICLGPIKKFTTVSGVVSVVMALVVAVPLQTWAKDFVEEGSETTILA----- 580 Query 517 PRHRFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWT 576 P + D M+ DL A +L PG D I DG WMYA GLH + Sbjct 581 PHN--------DERMVSNNDLAAWDWLIQQPGGADMNIMGDPADGNGWMYAYNGLHSVAR 632 Query 577 HYDYPLQQGPGYHRFIFW-------AYGRNGESDPRVLEAIQVLRIRYILTSTPTVRGFA 629 HY +P +FW N + V +A + L + Y + S T F Sbjct 633 HYAWPAAGEGSATAMLFWWPQLLGVGTDENPDQVNDVDQAARDLNVGYFMISPWTFWDFQ 692 Query 630 VPD 632 +P+ Sbjct 693 IPN 695 >gi|62389457|ref|YP_224859.1| hypothetical protein cg0658 [Corynebacterium glutamicum ATCC 13032] gi|41324791|emb|CAF19273.1| putative membrane protein [Corynebacterium glutamicum ATCC 13032] Length=746 Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 140/543 (26%), Positives = 223/543 (42%), Gaps = 66/543 (12%) Query 126 SIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTGA 185 I WD WHA+TVRFI +TG ASST MG+LRN+ET L+YPS +H V + Sbjct 130 DIVQGWDVHWHASTVRFIDETGIASSTMMGQLRNIETQQDLFYPSAWHAGAWVLSDVGNL 189 Query 186 APTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAAALS 245 L+ + S L P++ A++ WR + + A AG A ++ Sbjct 190 TIVEATNLTGIVLSGLLLPLAVALIAWRMINNR------------GLTAQIGAGFAGLIT 237 Query 246 ASFTAVPYVEFDTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFSLHITGG 305 + + +V A P +AA G + + L ST RI A LA +G+F LH Sbjct 238 IASPVLFWVGNYVGAWPYVAAIGASGVVLALFMSTPSVPVRIFAAALAFMGMFQLHPAPS 297 Query 306 IVVALLVSAWWLFEALRHPVRS----------RLADLLTLAGVAAMAGLVMLPQFLSVRQ 355 +V +++ WWL + + P + RL D+ LA + L MLPQ +S + Sbjct 298 TIVIMVLLLWWLLKLVVVPSQKVKGWKAGIGIRLKDVGILAITGIIGVLFMLPQVISGSE 357 Query 356 QEDIIAGHAFPTYLSKKRGLFDAVFQHSRHLNDF------PVQYALIVLAAIGGLILLV- 408 Q + + ++ +++ ++F +RH++ F PV +V AAIGG++ LV Sbjct 358 QTEDVLSYSAEEQVTRSESWLVSIFMETRHVDFFGNIDIVPV----LVFAAIGGVVALVW 413 Query 409 -KKIWWPLAVWLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAG 467 +W P+ + + + ++ P P G +G Y R+ + AG Sbjct 414 RGNLWAPV-FYFASVALTANSLKPFEEPWGDWLNIVGGLHYSTGHRLIMPVAMFTFAAAG 472 Query 468 VALFATVMLLVAAAKR-----------LTDRFRPQPVSVWASATATLLIGATLVSAWHYF 516 + A + L+ + + P+ WA T+++ Sbjct 473 IGAAAVIRLICLGPIKKFTTVSGVVSVVMALVVAVPLQTWAKDFVEEGSETTILA----- 527 Query 517 PRHRFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWT 576 P + D M+ DL A +L PG D I DG WMYA GLH + Sbjct 528 PHN--------DERMVSNNDLAAWDWLIQQPGGADMNIMGDPADGNGWMYAYNGLHSVAR 579 Query 577 HYDYPLQQGPGYHRFIFW-------AYGRNGESDPRVLEAIQVLRIRYILTSTPTVRGFA 629 HY +P +FW N + V +A + L + Y + S T F Sbjct 580 HYAWPAAGEGSATAMLFWWPQLLGVGTDENPDQVNDVDQAARDLNVGYFMISPWTFWDFQ 639 Query 630 VPD 632 +P+ Sbjct 640 IPN 642 >gi|227549871|ref|ZP_03979920.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] gi|227078126|gb|EEI16089.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] Length=717 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 176/656 (27%), Positives = 283/656 (44%), Gaps = 64/656 (9%) Query 7 TLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWTALAA 66 +++A++L PG +++ +A ++ P A A +T+GV+ ++ +G P+N T + Sbjct 7 SVVAVMLFTLPGFVISWVAGVKAPAAAASALPVTFGVMGMSAWMWGETTAPFNTLTFTIS 66 Query 67 LAVT--CAV----ATGLQLLLA---RFRDLDAE----ALAVSRW--PAVTVAAGV-LLGA 110 L T CAV AT +L A R R ++A W PAV V G ++ Sbjct 67 LMFTLGCAVLWRWATDRRLRTATTWRERAFPEGWRRGSVADPAWVLPAVGVVGGAWMIVG 126 Query 111 LLIGWAAYRGIPH-WQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYP 169 + W +PH ++I WD WHAN VRFIL+ G AS T MGEL+N+ET A L YP Sbjct 127 DRVNWLLR--VPHGTENIVQGWDVQWHANVVRFILEEGIASPTRMGELQNIETQAQLLYP 184 Query 170 SVFHGLVAVFCQLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCAS 229 + +H +A+F Q+ G P + + P++ A L +S Sbjct 185 TGYHSGIALFAQVAGLEPIPALNVVAAILPGLALPLTMACLVLAVTQS------------ 232 Query 230 AEWRAAGAAGTAAALSASFTAVPYVEF--DTAAM-PNLAAYGIAVPTMVLITSTLRHRDR 286 R A AA + + P + + D M P L A + + ST Sbjct 233 ---RGLTAQIAAALAALACYVAPTLMWIPDYVGMWPYLFAVTLTGIVIWQFCSTPSRPAM 289 Query 287 IPVAVLALVGVFSLHITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVM 346 A+L +GV +H + +VAL V+ +WL L PV +RL DLL +AG A + L+ Sbjct 290 ALPAMLGFLGVLVVHPSAVTIVALAVALFWLTRLLFVPVTTRLKDLLWIAGPAVVGALLF 349 Query 347 LPQFLSVRQQEDIIAGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLIL 406 LPQ L Q + +A + +RH F + VL + + Sbjct 350 LPQLLQGSSQAEEVAEWGVTEGDLTPTPWKTILMMRTRHSVQFFPDFDATVLLWLAVVGA 409 Query 407 LVKKIW----WPLAVWLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLL 462 +V W WP+ + + + V P +G A+ Y+ R+ ++L Sbjct 410 VVVVAWRRQVWPVLFFTISAMAAVHVLEPFDSVVGTALSAITNLHYNTAHRLVMPVSMLT 469 Query 463 MLMAGVALFATVMLLV---AAAKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRH 519 ++ A + + A + LL AA++ + R+R WAS +A+L++ + + R Sbjct 470 IVGAAIGVAAAIRLLTLAPLAARKGSPRWR------WASISASLVVAVIAGAGTVAWARD 523 Query 520 RFLFGDK-------YDSVMIDQKDLDAMAYLASLPGARDTLIGNANTDGTAWMYAVAGLH 572 G K D+ M+ D A +LA+ P A + L DG +W+YA G+ Sbjct 524 TSELGAKGAYTETRMDTRMVSDNDRIAFDWLATQPAAWEGLTYGEPDDGHSWLYAYNGVP 583 Query 573 PLWTHYDYPLQQGPGYHRFIFW---AYGRNGESDPR----VLEAIQVLRIRYILTS 621 L HY +P I + A G DP V EA + L +++I++S Sbjct 584 TLSRHYLWPTGGSGSMMDRIHYHTDALGEGLRGDPDAENPVDEAARELGVKFIISS 639 >gi|336326393|ref|YP_004606359.1| hypothetical protein CRES_1842 [Corynebacterium resistens DSM 45100] gi|336102375|gb|AEI10195.1| putative membrane protein [Corynebacterium resistens DSM 45100] Length=942 Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 145/496 (30%), Positives = 209/496 (43%), Gaps = 67/496 (13%) Query 125 QSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTG 184 SI WD WHA+ +RFI +TG ASS MGEL+N+ET PL+YP+ FH A Sbjct 150 DSIFQGWDVHWHASVLRFIHETGVASSIRMGELQNIETQKPLFYPTGFHTFGAALQDYAD 209 Query 185 AAPTTGYTLSSLAASVWLFPVSAAVLTWRAV--RSHPGALWSASCASAEWRAAGAAGTAA 242 P ++S+ +SAA L W V R GAL AAG A Sbjct 210 LTPVEALNVTSVVLPAVSLALSAAFLAWVMVGRRGLTGAL--------------AAGLAP 255 Query 243 ALSASFTAVPYVEFDTAAMPN---LAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFS 299 V YVE+ T A PN L+ GIA ++ + + IP A L GV + Sbjct 256 VAVVGVIPVFYVEYYTGAWPNASALSMVGIAAAALMKVPERPKM---IPAAALGFAGVGA 312 Query 300 LHITGGIVVALLVSAWWLFEALRHPVRS-------------RLADLLTLAGVAAMAGLVM 346 +H + VVA++V+ WWL L P R D+L + A G +M Sbjct 313 VHPSAIPVVAVIVALWWLLWKLFVPTGREQGKRGFFRGVWLRCKDVLLIGVTAIAGGALM 372 Query 347 LPQFLSVRQQEDIIAGHAFPTYLSKKRGLFD------AVFQHSRHLNDF-PVQYALIVLA 399 LPQ++ + +G A KR + D VF+ N + P Q+ + A Sbjct 373 LPQWM-------VGSGQASEVSAFNKRQVPDYGDAWQRVFELQSRANHYAPTQWWVTWGA 425 Query 400 AIGGLILLV-KKIWWPLAVWLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAAT 458 G ++LL+ ++ W A LL + + GP G VAG L Y+ R+ Sbjct 426 IAGAVVLLLWRRNIWAAAATGLLAAVGAYSLKNFDGPAGAVAGFLSGLNYNSAHRLFHPL 485 Query 459 TLLLMLMAGVALFATVMLLVAA-------AKRLTDRFRPQPVSVWASATATLLIGATLVS 511 L+ +A VA A V ++ KR + R + + W S L AT + Sbjct 486 ALVATALAAVAAAAVVRFVLGGFLDIPFLRKRRDAKGRRKGIQ-WVSVIPATLATATCIG 544 Query 512 ------AWHYFP---RHRFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANTDGT 562 W P ++R+ D M+ +K+ A +L PGA D +I N + +GT Sbjct 545 IAFGLVPWTQAPMEGKYRWAVTASRDGRMVGEKEKGAFEWLKRQPGAYDGIIANNSHEGT 604 Query 563 AWMYAVAGLHPLWTHY 578 WMY + L L H+ Sbjct 605 GWMYPLHNLPSLHRHF 620 >gi|213964889|ref|ZP_03393088.1| hypothetical membrane protein [Corynebacterium amycolatum SK46] gi|213952425|gb|EEB63808.1| hypothetical membrane protein [Corynebacterium amycolatum SK46] Length=895 Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 182/656 (28%), Positives = 294/656 (45%), Gaps = 72/656 (10%) Query 9 IALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWTALAAL- 67 +A+ +L+ PG ++ ++ LR +A+A L GV + ALG+ + W +A + Sbjct 7 VAVFILLVPGTVLGWVSGLRPTLALASAGPLMLGVTGFSAWLSHALGLDYT-WLFVAGMW 65 Query 68 AVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRGIPHWQSI 127 A CA+ ++ + R D V V A ++ G ++G + R + + Sbjct 66 AWFCAIGYLVRRFIPRATPEDGFDSGV-------VTAMIVAGVTVVG--SMRAMLMLNDV 116 Query 128 P-------STWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFC 180 P WD +WH N +RFI + AS T G+L N ET A ++YP+ +H AV Sbjct 117 PGGPGAIREAWDMLWHTNFLRFIDEHAIASPTAAGDLMNQETGAEMFYPTGWH---AVAG 173 Query 181 QLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGT 240 L G+ L S + + T R+ G W A AG Sbjct 174 LLPGSV-----FLDSNVFAFLAPALLLPAATAVLARTAVGPKW-----------ATYAGP 217 Query 241 AAALSASFTAVPYVEF-DTAAMPNLAAYGIAVPTMVLITSTLRHRDRIPVAVLALVGVFS 299 AAA++ +V T++MP Y +AV + + + +P A LALVG F Sbjct 218 AAAVATLMLPEIWVALWRTSSMP----YLLAVAALPIAAALTMRGYFVP-ATLALVGTFI 272 Query 300 LHITGGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQFLSVRQQEDI 359 H G I L V W + + P S LA L + A+A ++ LP LS Q + Sbjct 273 THPAGAIAAVLFVGLWLITQ----PSVSGLARTLI---IGALALVMTLPAALSASGQGES 325 Query 360 IAGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLVKKI----W--W 413 +AG +S+ L+ + SR+ ++ + ++VL IG ++ LV ++ W W Sbjct 326 VAGFTGQIEISRSESLWRTLIGFSRYADEPIFSHTVLVLVLIGLVVALVSRLPDSPWAPW 385 Query 414 PLAVWLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMAGVALFAT 473 P V+ LL V++ A + P G +G FFY P R+ A +L ++ G A+ A Sbjct 386 PALVFGLLFVVSDSAQSRWAEPFGTYLKFIGTFFYDMPYRMQAVMGILRAVLVGYAVAAA 445 Query 474 VMLLVAAAKRLTDRFRPQPVSVWASATATLLIGATLV--SAWHYFPRHRFLFGDKYDSVM 531 V+ +VA A+ + + R QPV W A A L+ A + + W P R + S Sbjct 446 VVAIVAVAQWIVAK-RNQPVKSWNPALAMGLVAALAIVPATWVSGPAQRDAIRQGFGSTF 504 Query 532 IDQKDLDAMAYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRF 591 + D++A+ +L++ P A + I N DG+AWMYA+AGL L+ H+ + + ++ Sbjct 505 VTAADMEAIDWLSAQPHAFEGHILNDRRDGSAWMYAIAGLPTLFRHFSFSDKTAEASNKL 564 Query 592 IFWAYGRNGE---SDPRVLEAIQVLRIRYILTSTPTVRGFAVPDGLVSLETSRSWA 644 N + S P + L + YI++S P V DG +L + RSWA Sbjct 565 -----PTNVDLLGSHPEFDAMAKKLGVHYIISSPPGVNT----DGTEAL-SMRSWA 610 >gi|302530928|ref|ZP_07283270.1| predicted protein [Streptomyces sp. AA4] gi|302439823|gb|EFL11639.1| predicted protein [Streptomyces sp. AA4] Length=653 Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 184/687 (27%), Positives = 296/687 (44%), Gaps = 80/687 (11%) Query 8 LIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG-----WT 62 L+ L+ PG + +LR A P LT+GV+AL + G LGI W WT Sbjct 9 LLVLLAFWVPGLVFGAAIRLRGWTLAAAAPLLTFGVIALGVPVLGGLGIRWTLLNVALWT 68 Query 63 ALAALAVTCAVATGLQLLLARFRDLDAEALAVSRWP---AVTVAAGVLLGALLIGWAAYR 119 L + V +A ++ L AR R D + + P + +AAGV++ + R Sbjct 69 -LVLVVVGFGLAFAVRWLRAR-RHPDWTGEDLEKLPLRDHLVMAAGVVVALGVGAVTFLR 126 Query 120 GIPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVF 179 G ++ WDA +H N VR+I + G A + +G + N+ +YP +H L+A+ Sbjct 127 GTNGIYTVQQGWDAPFHGNLVRWIAEHGDARPSTVGTIANLPNQTNYFYPDTYHALLALV 186 Query 180 CQLTGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAG 239 G L++LA V+ P A L C A GAA Sbjct 187 FGKGGLTMMPTLNLAALAV-VFTVPFGIAAL----------------CRVWGMPALGAA- 228 Query 240 TAAALSASFTAVPYVEFDTAAM-PNLAAYGIAVPTMVLITSTLRHRDRI--PVAV-LALV 295 AAA+S F+A PY + P +A + VP M+ + L + I PVA+ + + Sbjct 229 AAAAVSTWFSAFPYDSLWRGPLWPYVAGVAL-VPAMLALGRYLLKPNGIAGPVAIGVGVA 287 Query 296 GVFSLHITGGIVVA-----LLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGL-VMLPQ 349 G+ LH + VV +LV+ FE + R L L+ G+A G+ ++LP Sbjct 288 GLCGLHTSVVFVVVVYFLFILVAVLCRFEKIEW--RRSLPSLIATGGLAIALGVPLVLP- 344 Query 350 FLSVRQQEDIIAGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLILLV- 408 S+ + + + P + G F S ++DFP + I + A GLILLV Sbjct 345 --SLYNAGGVTSAYWAPE--TTLAGGFGQTITFS-PMSDFPQWW--IGVPAFVGLILLVR 397 Query 409 -KKIWWPLAVWLL---LIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLML 464 +++ W +A ++L L ++ V +PL L FY+D RIAA L+ Sbjct 398 HRRMLWLVAAYVLFGGLFMLTVSINSPL-------MQTLTSLFYNDHWRIAA-----LLP 445 Query 465 MAGVALFATVMLLVAA--AKRLTDRFRPQPVSVWASATATLLIGATLVSAWHYFPRHRFL 522 +AG F AA ++ R + P ++ A L + +S Y R+ Sbjct 446 LAGAVAFGEFAHTAAAWFVRKAQPRVKLAPATLGVVAVVLLGLVCGGLSKGGYVGRNAVR 505 Query 523 FGDKY-DSVMIDQKDLDAMAYLA--SLPGARDTLIGNANTDGTAWMYAVAGLHPL-WTHY 578 Y D + + + A A+L ++PG R + N +DG+AWMYA+AG+ P+ WT Y Sbjct 506 LATNYHDGPTVSKAEEAAFAWLGQHTVPGER---VMNNRSDGSAWMYALAGVQPVEWTFY 562 Query 579 DYPLQQGPGYHRFIFWAYGRNGESDPRVLEAIQVLRIRYILTSTPTVRGFAVPD-GLVSL 637 GY A+ + + P+V + LR+RY++ A+ G+ + Sbjct 563 GADANTKAGYLS----AWVNDIDKYPQVRADLTDLRVRYLIQGKGKATETAIESVGVTRV 618 Query 638 ETSRSWAKIYDNGEARIYEWRGTAAAT 664 + ++ N A IYE G + + Sbjct 619 RPGPQFRVVFHNEGATIYEIAGQSGVS 645 >gi|269794224|ref|YP_003313679.1| hypothetical protein Sked_08940 [Sanguibacter keddieii DSM 10542] gi|269096409|gb|ACZ20845.1| hypothetical protein Sked_08940 [Sanguibacter keddieii DSM 10542] Length=657 Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 171/687 (25%), Positives = 281/687 (41%), Gaps = 83/687 (12%) Query 10 ALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWTAL----- 64 +L+L + PGA V A+LR V +A P +TYG+V + GI W+ W L Sbjct 11 SLLLAVVPGAAVLVAARLRGWVLVA-SPLVTYGIVTIGGALCTWTGISWSIWGLLLSTVL 69 Query 65 ---AALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVT--------------VAAGVL 107 ALA++ V LQ ++ D + V VAA Sbjct 70 WVAVALALSAFVPQVLQPVVTDDSDSTEGSPVTGEHAEVASPLTHRLTWKVHGLVAACAA 129 Query 108 LGALLIGWAAYRGIPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLY 167 G L + RG+ S+ WD V+H VR+I DTG S + + +L N ET + Sbjct 130 FGGLFGAYVLRRGMGSLNSVVQDWDGVFHGAVVRWIADTGDLSQSSIAQLNNRETVDTFF 189 Query 168 YPSVFHGLVAVFCQLTGAAPTTGYTLSSLAASVWL-FPVSAAVLTWRAVRSHPGALWSAS 226 YPS +HGL A+ L + SL + L F ++ VL RA R+ Sbjct 190 YPSSWHGLAALGWDLGVDSVPRLLNAGSLMMPILLAFGIAGLVL--RATRNP-------- 239 Query 227 CASAEWRAAGAAGTAAALSASFTAVPYVEFDTAAMPNLAAYGIA---VPTMVLI-TSTLR 282 AGA+ + ++ FDT L + + VP +VL+ L Sbjct 240 ------VMAGASAILVTMPSALV------FDTLWRGPLIPFAVGLAMVPALVLLFDKALT 287 Query 283 HRDR--IPVAVLALVGVFSLHITGGIVVALLVSAWWLFEALRHPVRSRL--ADLLTLAGV 338 HR LA GV +H + G+ A + W+ + R R +L DLL++ + Sbjct 288 HRSTGLFLATGLAAGGVVGVHPS-GVYTAFIFLVPWILQ--RWITRRQLIVGDLLSIVAI 344 Query 339 AAMAGLVMLPQFLSVRQQEDIIAGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVL 398 +A LV P L+ A +P + + + +A+ + H P Q+A+++L Sbjct 345 GFVAALVAAPSLLTAISAS-TGARQDWPAVETAGQAVGEALLLN--HARSGP-QWAIVLL 400 Query 399 AAIGGLIL-LVKKIWW---PLAVWLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRI 454 A +G L V+ +WW + L L V+ TPL A L +++D R Sbjct 401 AVVGVLTFRRVRGLWWFWVAGIISLGLFVLAAAYDTPL-------AEDLTAPWWNDRWRF 453 Query 455 AAATTLLLMLMAGVALFATVMLLVAAAKRLTDRFRPQPVSVWASATATLLIGA-TLVSAW 513 AA ++ + VA V +V R P + + +L+G+ +++S Sbjct 454 AA----MVGMFVAVAAGVGVAAIVERVPRWVAGLTPVGIKTATAGVVVVLVGSFSMLSHA 509 Query 514 HYFPRH--RFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANTDGTAWMYAVAGL 571 Y ++ R + + SV I Q DL+ + A + ++ N TDG+ WM A+ GL Sbjct 510 GYAEQNSSRMYWNFQSGSV-IGQDDLELWSKAADIV-PEGQMVLNDPTDGSTWMLAMEGL 567 Query 572 HPLWTHYDY--PLQQGPGYHRFIFWAYGRNGESDPRVLEAIQVLRIRYILTSTPTVRGFA 629 P + P Q G + + + +D V + + I Y++ + G + Sbjct 568 RPFFGGITLAIPNQAGLTATQEAILFHLSDIATDQEVRDIVDEYGIEYVIVGDGWIHGMS 627 Query 630 VPDGLVSLETSRSWAKIYDNGEARIYE 656 G + LE + S+ + GEA+++ Sbjct 628 RAAGFLDLEDNPSFELVEQVGEAQLFR 654 >gi|116671235|ref|YP_832168.1| hypothetical protein Arth_2689 [Arthrobacter sp. FB24] gi|116611344|gb|ABK04068.1| hypothetical protein Arth_2689 [Arthrobacter sp. FB24] Length=665 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 73/212 (35%), Positives = 106/212 (50%), Gaps = 18/212 (8%) Query 4 WFGT----LIALILLIAPGAMV-ARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPW 58 WF T L L+LL APG +V A + RW +AV P LT +VA+ I LGI W Sbjct 3 WFATVPVVLACLVLLFAPGTLVLAGLGLQRWSY-LAVAPVLTVSIVAVTAIVAPYLGISW 61 Query 59 NGWTALAALAVTCAVATGLQLLLARFRDLDAEALAVSRW-------PAVTVAAGVLLGAL 111 + A + V G++ L R R A +RW V AAG L G+ Sbjct 62 SVLPVAVATVLVAGVLFGVRKL--RARRAGASESPRARWALRRPGKSDVISAAGFLAGSA 119 Query 112 LIGWAAYRGIPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSV 171 I +R ++I T+D V+H N +R+ILDTG ASS + + + ++ P +YP+ Sbjct 120 AIALQLHRAFGRPENISQTFDNVFHLNAIRYILDTGNASSLTLSGMTSGDS-PPYFYPAA 178 Query 172 FHGLVAVFCQLTGAAPTTGYTLSSL--AASVW 201 +HGL ++ QLTG + + +L AA+VW Sbjct 179 WHGLASLLVQLTGTPISVAVNVVNLSVAAAVW 210 >gi|300782157|ref|YP_003762448.1| hypothetical protein AMED_0223 [Amycolatopsis mediterranei U32] gi|299791671|gb|ADJ42046.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340523516|gb|AEK38721.1| hypothetical protein RAM_01130 [Amycolatopsis mediterranei S699] Length=669 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 151/563 (27%), Positives = 238/563 (43%), Gaps = 75/563 (13%) Query 131 WDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTGAA-PTT 189 WD V+HAN +R+I +TG S T MG + + +YP+ +H + A+ +L+G + P T Sbjct 142 WDTVFHANGIRYIAETGDGSLTGMGTINWYPAGS--FYPNAYHLVGALVYELSGTSVPVT 199 Query 190 GYTLSSLAASVWLFPVSAAV--LTWRAVRSHPGALWSASCASAEWRAAGAAGTAAALSAS 247 ++ A ++ ++A V L RAV + AL AG A T A S S Sbjct 200 LNAITMPIAGLFALAMAALVRQLGGRAVFAGSAAL-----------VAGGATTGAYESVS 248 Query 248 FTAVPYVEFDTAAMPNLAAYGIAV-PTMVLITSTLRHRDRIPV-AVLAL--VGVFSLH-- 301 +P+ A GI + P V+ R + AVLAL G+ + H Sbjct 249 SGLLPF------------ALGIVLTPLAVIALQRFVVRPGVDTGAVLALSATGLLAAHSS 296 Query 302 -ITGGIVVA--LLVSAWWLFEALRHPV-----------RSRLADLLTLAGVAAMAGLVML 347 + G I+ A L+V W + ALR R D+L + V AGL+ Sbjct 297 ALFGAILFAFPLVVQRW--YRALRGRRVDGVPEGRAAWRVAGGDVLWVLPVMVAAGLLAA 354 Query 348 PQFLSVRQQEDIIAGHAFPTYL-SKKRGLFDAVFQHSRHLNDFPV-QYALIVLAAIGGLI 405 P L ++P Y ++ A+ + PV Q L V AIG L Sbjct 355 PMILGAIG----FTSGSYPYYAWGSHMPVWKALAMLATFKQVLPVPQIWLTVFLAIGVLT 410 Query 406 LLVKKIWWPLAVWLLLIVMNVDAGTPLGGPIGGV--AGALGEFFYHDPRRIAAATTLLLM 463 L + WL+L + + A + GG +L +++D R+ A ++ + Sbjct 411 LGALR----RMRWLVLSALGLSALFVVVACFGGEHWVISLSRPWWNDRFRLMALASIPMC 466 Query 464 LMAGVALF-ATVMLLVAAAKRLTDRFRPQPVSVWASATATLLIGA--TLVSAWHYFPRHR 520 L+A + A L A+ R R RP ATA LL+ A L ++ + Sbjct 467 LLAAHGMSEAQRWLAKLASGRAWVRARPWLTGRVGLATAVLLVVAMGVLTGGFYRAANAK 526 Query 521 FLFGDKYDSVM------IDQKDLDAMAYLASLPGARDTLIGNANTDGTAWMYAVAGLHPL 574 + Y+ + + Q ++DAM +L +L + + N DGTAWMYA+ G+HP+ Sbjct 527 TVSLLYYNGLPGEVVPPVSQDEIDAMDHLGTLGIPAEQKVLNDRLDGTAWMYALTGVHPV 586 Query 575 WTHYDYPLQQGPGYHRFIFWAYGRNGESDPRVLEAIQVLRIRYILTSTPTV-RGFAVPDG 633 HYD + + +A + +SDP V A++ L I Y+L + T+ R + G Sbjct 587 AGHYDAGVAPPDALYLARHFA---DYDSDPEVRAAVRRLDIHYVLVGSGTIRRDTPIARG 643 Query 634 LVSLETSRSWAKIYDNGEARIYE 656 L L+ +Y N A IY Sbjct 644 LQHLDGHDFLEVVYRNPGAVIYR 666 >gi|269794220|ref|YP_003313675.1| hypothetical protein Sked_08900 [Sanguibacter keddieii DSM 10542] gi|269096405|gb|ACZ20841.1| hypothetical protein Sked_08900 [Sanguibacter keddieii DSM 10542] Length=707 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/172 (37%), Positives = 84/172 (49%), Gaps = 5/172 (2%) Query 4 WFGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWTA 63 W L +++L PGA+V LR +A PAL+ G +A + GIPW + Sbjct 7 WEEVLRGILVLAVPGALVGYAVGLRRWWLVATAPALSVGTLATWGVLLSFAGIPWTVLSV 66 Query 64 LAALAVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLLGALLIGWAAYRGIPH 123 AA +T V G Q L R D AL WPA AGV + L A G+ H Sbjct 67 GAATLLTAGVLLGAQTALRRVWRPDRAALGW--WPATV--AGVAVAGFLGVVAMRDGMAH 122 Query 124 WQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGL 175 + P TWDA++H N V+ +LDT ASS H+G+L P YP+ +HGL Sbjct 123 PDAPPQTWDAIFHLNAVQRVLDTQDASSLHLGQL-TAPLRDPAIYPAAWHGL 173 >gi|311112512|ref|YP_003983734.1| hypothetical protein HMPREF0733_10842 [Rothia dentocariosa ATCC 17931] gi|310944006|gb|ADP40300.1| conserved hypothetical protein [Rothia dentocariosa ATCC 17931] Length=663 Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 149/692 (22%), Positives = 284/692 (42%), Gaps = 76/692 (10%) Query 4 WFG----TLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWN 59 WF TL A+ + PG V ++ + P L+ V++LA I G +GI W Sbjct 3 WFSLIPATLFAVACVFVPGYAVGWALKVPQRFRVGFAPLLSIAVISLAAIVTGKVGIHWG 62 Query 60 GWTALAALAVTCAVATGLQLLLARFRDLDA--EALAVSR-WPAVTVAAGVLLGALLIGWA 116 L + V + G LL + ++ VS WP AG ++G L+ Sbjct 63 VIPLLVFMVVLVGILWGAYYLLGKRLEVPQPFSLKGVSLGWP----LAGAIVGGALLSHT 118 Query 117 AYRGIPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLV 176 + ++ + D +H N +++I D G ASS +G L + H+P++YP+ +H LV Sbjct 119 TRDMVYGPEAFSQSLDNSFHLNAIQWIEDHGDASSLTLGALADTH-HSPVFYPAGWHDLV 177 Query 177 AVFCQLTGAAPTTGYTLSSLAAS--VWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRA 234 + G + T ++ L +W F A L+ V S AL Sbjct 178 YLVYSTCGVSIPTATIVTILVTVGFIWSFSFIALALSIPKV-SQLQAL------------ 224 Query 235 AGAAGTAAALSASFTAVPYVEFDTAAM-PNLAAYGIAVPTMVLITSTLRHRDR------- 286 A++ F A P + + PNL Y + + LI T+R + Sbjct 225 -----AIPAVTCGFFAYPGLLLRWGVLYPNLIGYAVMPAAIALIILTVRAVVKGRYQKLW 279 Query 287 --IPVAVLALVGVFSLHITGGIVVALLVSAWWLF---EALRHPVRSRLADLLTLAGVAAM 341 IP +L L+G H + VA+ V + L + +R +SR + +AA+ Sbjct 280 TLIPTLLLGLIGCALAHPNALVSVAVFVVPFLLAMIGKVVRTYRKSRQTAIAGGIILAAL 339 Query 342 AGLVMLPQFLSVRQQEDIIAGHAFPTYLSKKRGLFDAVF---QHSRHLND-FPVQYALIV 397 A V + + +R E A + + + +S+ ++ +F +++ L D F Y + Sbjct 340 ATCVAV--WYMIRPGE--FASNTWTSVMSEGEAVYQFLFFGLENANQLGDKFEPSYIMAF 395 Query 398 LAAIG-GLILLVKKIWWPLAVWLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAA 456 L G G ++ ++ W + W+L+ + V + + GP + + +Y D R+A Sbjct 396 LTLWGAGYLIYKRRNLWIITSWILVGYLWVISASVERGPFRML---MVSPWYTDHFRLAT 452 Query 457 ATTLLLMLMAGVALFATVM----LLVAAAKRLTDRFRPQPVSVWASATATLLIGATLVSA 512 L ++++G+ L A V ++A R+ D Q + V ++ +L+ A S Sbjct 453 LVVLPGVILSGIGLGAIVQSVLKFVLARLPRVNDTRYTQVLLV--ASAVIVLVAAGFTSR 510 Query 513 WHYFPRHRFLFGDKY----DSVMIDQKDLDAMAYLASLPGARDTLIGNANTDGTAWMYAV 568 +Y SV++ +++ + ++ D +I N DG+ ++Y++ Sbjct 511 TQAVHDATLAVSKEYRIEPSSVIVSSDEMNVIEHIPDYVPQGD-IIANNPWDGSPYIYSL 569 Query 569 AGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGESDPRVLEAIQVLRIR-YILTSTPTVRG 627 + H+D+ + +R I+ + ++ ++DP V + + + Y+ P G Sbjct 570 VHRNLTGYHFDFKTDEK---YRPIY-KHLKDAKTDPEVCKVVNENNVHWYVHFKNPLNFG 625 Query 628 ---FAVPDGLVSLETSRSWAKIYDNGEARIYE 656 + DG+ + +Y +GE +Y Sbjct 626 PDAQNLYDGMSDAVENGVLTPVYTSGEMGLYR 657 >gi|283457133|ref|YP_003361698.1| putative ATP-dependent serine protease [Rothia mucilaginosa DY-18] gi|283133113|dbj|BAI63878.1| predicted ATP-dependent serine protease [Rothia mucilaginosa DY-18] Length=673 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 162/695 (24%), Positives = 283/695 (41%), Gaps = 91/695 (13%) Query 8 LIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWTALAAL 67 L A++L PG + ++ + + + P L++ +VA++ I G +GI WN + + Sbjct 17 LFAVVLAFGPGYAMGWALRVPARLRVFLSPLLSFALVAVSAIVLGKIGIAWNLTSFVVVA 76 Query 68 AVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTV-----AAGVLLGALLIGWAAYRGIP 122 V A A GL L+ R AL + WP V G +LG L+ + Sbjct 77 VVLVATAAGLMWLVGR----RWPALTSAEWPGNDVPVAWPVVGAVLGGFLVLHMTEDMVY 132 Query 123 HWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQL 182 ++ + D +H N +R+I + G ASS +G + + P +YP+ +H V++ Sbjct 133 GPEAFSQSLDNSFHMNAIRWIQEHGDASSLTLGAVSAADQQ-PAFYPAGWHDFVSLIYST 191 Query 183 TGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAA 242 TG + T ++ L A+ L+P S L S + + R A Sbjct 192 TGTSIATATIVTVLLAASILWPCSLVAL---------------SLSIPKLRRLQALAI-P 235 Query 243 ALSASFTAVPYVEFDTAAM-PNLAAYGIAVPTMVLITSTL-------RHRDRIPVAVLAL 294 AL+ F A P + + PNL Y + VP+ V + L + + + + AL Sbjct 236 ALTCGFAAFPGLLLRWGVLFPNLLGYAL-VPSFVALMVCLVQVMVRGEYAALLSLCLAAL 294 Query 295 VGVFSLHIT--GGIVVALLVSAWWLFEALRHPVRSR-LADLLTLAGVAAMAGLVMLPQ-- 349 VGV L + +V A++ + + + VRSR L G +A+ GLV+L Sbjct 295 VGVAGLALVHPNAVVSAVVFALPLVLAGVAWVVRSRELTSRQKWVG-SALLGLVILGCVG 353 Query 350 ---FLSVRQQEDIIAGHAFPTYLSKKRGLFDAVF---QHSRHLND-FPVQYALIVLAAIG 402 FL + A + + L++ L+ +F +++ L D F Y LA G Sbjct 354 AWWFL----RPGASASNTWEPMLTEGEALYQFLFLGLENANQLRDRFNPSYLAGFLALWG 409 Query 403 -GLILLVKKIWWPLAVWLLL-IVMNVDAGTPLGGPIGGVAGALGEF-------FYHDPRR 453 G +L + W +A W+L+ + V A P GEF +Y D R Sbjct 410 AGYLLYKHRNLWLIASWVLIGYLWIVSASVP-----------RGEFRLLMVAPWYTDHFR 458 Query 454 IAAATTLLLMLMAGVALFATVMLLVAAAKRLTDRFRPQPVSVWASATAT--LLIGATLVS 511 +AA +++AG+ L V L+ R R V+ AT +L+ A L S Sbjct 459 LAALVVFPSVILAGIGLGGFVEGLLTWVVRRVPRAARLKVATAGIGVATVLVLVIAGLSS 518 Query 512 AWHYFPRHRFLFGDKY----DSVMIDQKDLDAMAYLASLPGARDTLIGNANTDGTAWMYA 567 +Y SV+++Q +++ + + + D ++ N DG+A++YA Sbjct 519 RVPSVQETTLAVSQEYRVTPTSVVLNQDEMNVINEIPKIVPKGDVIVNNP-WDGSAYIYA 577 Query 568 VAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGESDPRVLEAIQVLR------IRYILTS 621 +A H T Y + + P Y + ++ ++P V + + + L Sbjct 578 LADRH--LTGYHFEFETSPKYSAIMH--NLKDARTNPEVCREVNEYKAHWYVHLENQLNF 633 Query 622 TPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYE 656 P + DGLV+ + +Y +G +Y Sbjct 634 GPDAQKNY--DGLVAAIDTDVLTPVYSSGPMTLYR 666 >gi|300742609|ref|ZP_07072630.1| conserved hypothetical protein [Rothia dentocariosa M567] gi|300381794|gb|EFJ78356.1| conserved hypothetical protein [Rothia dentocariosa M567] Length=673 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 75/245 (31%), Positives = 120/245 (49%), Gaps = 27/245 (11%) Query 10 ALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWTALAALAV 69 ALI+LI PG +VA + R A+ + ++ G+ ++ I +G+ ++ LA AV Sbjct 5 ALIILI-PGLIVALAMRQRGVEALGLAAPISVGIFGVSAIFASKVGVRFSFLIPLA-FAV 62 Query 70 TCAVATGLQLLLARF--------------RDLDAEALAVSR---WPAVTVAAG--VLLGA 110 A GL L+ R R E A+ R + T+AAG VL+G Sbjct 63 ILA---GLGYLICRLLGSRGWLDFPAPQKRRDQQENTAIVRSGWFTPQTLAAGLSVLVGF 119 Query 111 LLIGWAAYRGIPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPS 170 +L+ + R I + I T+D +H N +R++ DTG ASS + + + AP +YP+ Sbjct 120 ILLYISIARAIGRPEYISQTYDVNFHLNAIRYMADTGDASSLTIANMTS-GGEAPTFYPA 178 Query 171 VFHGLVAVFCQLTG-AAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCAS 229 V+HG+ V Q+TG + P T +S L +V ++P+S L +R+ AL S S Sbjct 179 VWHGIATVIYQVTGISVPATANLMSVLVGAV-IWPLSVMYLVRSTMRASIPALLSVGVVS 237 Query 230 AEWRA 234 A + A Sbjct 238 ASFTA 242 Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust. Identities = 61/234 (27%), Positives = 96/234 (42%), Gaps = 26/234 (11%) Query 448 YHDPRRIAAATTLLLMLMAGVALFATVMLLVAAAKRLTDRFRP--QPVSVWASATATLL- 504 YHDP R+AA +L MA V + A L A L +R P + + + A A +L Sbjct 447 YHDPFRLAANVPILAAPMAVVGVHAAYQWLKAVIAVLGERIAPLKEHGGIISLALAVILL 506 Query 505 --IGATL-----VSAWHYFPRHRFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNA 557 +G L + + + R+L K D++++ + D + +L +T+I Sbjct 507 IPLGINLQTDPNIQGYIKGTQERYL--PKSDALLLSADERDVIEHLHDYVPTGETVIVQP 564 Query 558 NTDGTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGESDPRVLEAIQVLRIRY 617 T G+A YA+ G H PL R I+ + +P V A+Q + Y Sbjct 565 WT-GSAVTYALTGYKVTAAH---PLYTATPDAREIY-QHLNEAADNPAVCSAVQNSKAYY 619 Query 618 IL-----TSTPTVRG--FAVPDGLVSLETSRSWAKIYDNGEARIYEWRGTAAAT 664 L +RG + GL +L+ +Y GEA +Y R TA T Sbjct 620 YLDFKGREINEEIRGDHHSQYPGLENLQQKGVAEPVYSKGEATLY--RITACGT 671 >gi|184200547|ref|YP_001854754.1| hypothetical protein KRH_09010 [Kocuria rhizophila DC2201] gi|183580777|dbj|BAG29248.1| hypothetical membrane protein [Kocuria rhizophila DC2201] Length=677 Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 175/703 (25%), Positives = 279/703 (40%), Gaps = 95/703 (13%) Query 12 ILLIAPGAMVARIAQLR-WPVAIAVGPALTYGVVALAIIPYGALGIPWNGWTALAALAVT 70 IL++ PGA+++ LR + AV P G A A+I +G +G+PWN T A V Sbjct 15 ILMVLPGALLSVALGLRGLARSAAVIPLSVAGFSASAVI-FGLVGVPWNPLTVTLAFVVV 73 Query 71 CAVATGLQLLLARFRDLDAEALAVSRWPAVTVAAGVLL---GALLIGWAAYRGIPHWQS- 126 V L LL AR R L + + W V L AL IG R Q+ Sbjct 74 ALVLW-LALLPARRRLLAGPWVGTTPWRERITTTTVGLWCAAALGIGIVVQRLHLIMQTP 132 Query 127 --IPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTG 184 T+DA +H N VR+I +TGQASS +G L + P +YP+ +HG A Q+T Sbjct 133 DAYSQTYDANFHYNAVRYIQETGQASSLTLGGLGVGD---PTFYPAAWHGTAAFLTQVTH 189 Query 185 AAPT-TGYTLSSLAASV-WLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAA 242 A T T ++ + V W+ + T R + S P +A Sbjct 190 AQVTLTANAMTMMVCGVAWVL--GSLYFTTRLLGSRPAVTVAAGL--------------- 232 Query 243 ALSASFTAVPY-VEFDTAAMPNLAAYGIAVPTMVLITSTL--------RHRDRIPVAVLA 293 +++SF A PY + F PN + + L+T L R + V +LA Sbjct 233 -MASSFPAFPYLLSFYGILYPNAMSIAFLPVWLGLLTEALGLSREPRRGSRTALWVVILA 291 Query 294 LVGVFSLHITGGIVVAL------LVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVML 347 + G L +VV L L++ WW +P + L V +A L +L Sbjct 292 VTGAMGLAHPSTVVVGLALLWVMLLTVWWRALWHTNPWWRK-----ALGAVGLVAWLAVL 346 Query 348 PQ-FLSVRQQEDIIAGHAFPTYLSKKRGLFDAVFQHSRHLNDFPVQYALIVLAAIGGLIL 406 Q + + R + + + + ++ + L +A+ P +AL+++ +G L Sbjct 347 QQIWFAARASQ---SASTWKPHATEPQALGEALATVHPIAPHLP--WALVIVVLLGAGTL 401 Query 407 LVKKIWWPLAVWLLLIVMNVDAGTPLGGPIGGVAGALGEFFYHDPRRIAAATTLLLMLMA 466 L W + W L+ + V + G+ G +Y+D RI A ++ + MA Sbjct 402 LRHTSRWVVGPWAFLVWLYVLVSSSRD---AGLRYDWGGIWYNDVHRILALIPVVAVPMA 458 Query 467 GVALFATVMLLVAAAKRLTDR-----FRPQPVSVWASATATLL-------IGATLVSA-- 512 A + +V+ A+ R P+ V A+ T LL +G L A Sbjct 459 TAGAVAVLHWVVSRARHTVSRAAQSHRAPERVRATAARTTPLLRSRASAVVGGALAVALG 518 Query 513 WHY-----------FPRHRFLFGDKYDSVMIDQKDLDAMAYLASLPGARDTLIGNANTDG 561 W + R ++ G Y ++ ++ D + L + GN T G Sbjct 519 WQLLQTQAMTDIVNYGRGQYAGGGSYPYALVSPEERDLLEKLPEYVPQDAVVFGNPLT-G 577 Query 562 TAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGESDPRVLEAIQVLRIRYILT- 620 T+ YAV+G L H L PG I + +DP V A++ ++Y+L Sbjct 578 TSQAYAVSGTKVLIPHNG--LVSDPGVSVIIH--HLDELTTDPAVCPAVKEHNVQYVLDF 633 Query 621 STPTVRGFAVPD--GLVSLETSRSWAKIYDNG-EARIYEWRGT 660 + V FA D G L + + G +A++Y G Sbjct 634 GSRQVNPFAQFDAAGYDQLTPENGFQLVAQTGPDAKLYRITGC 676 >gi|300790707|ref|YP_003770998.1| hypothetical protein AMED_8905 [Amycolatopsis mediterranei U32] gi|299800221|gb|ADJ50596.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340532397|gb|AEK47602.1| hypothetical protein RAM_45685 [Amycolatopsis mediterranei S699] Length=656 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 64/193 (34%), Positives = 86/193 (45%), Gaps = 18/193 (9%) Query 5 FGTLIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNG---- 60 G L+ L PG + LR A P LT+GVVAL I G GI W Sbjct 1 MGFLLVLAAFWLPGTVFGAAIGLRGWTLGAAAPVLTFGVVALGIPLLGGTGIRWTALSVT 60 Query 61 -WT---ALAALAVTCAVATGLQLLLARFRDLDAEALAVSR----WPAVTVAAGVLLGALL 112 WT + A AVT AVA R R D EA + R W A +AA + + Sbjct 61 LWTLVVSAAGFAVTWAVAR-----FTRRRRPDDEAASPERPRWSWRAHALAALGVAAGMA 115 Query 113 IG-WAAYRGIPHWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSV 171 +G RGIP ++ WDA +HAN VR+I + G A + +G + N+ +YP Sbjct 116 VGALTVLRGIPSPGTVNQDWDAAFHANLVRWIAERGDARPSTIGTIANLPGETHYFYPDT 175 Query 172 FHGLVAVFCQLTG 184 +H L+A+ G Sbjct 176 YHALLALLFGKGG 188 >gi|302531570|ref|ZP_07283912.1| predicted protein [Streptomyces sp. AA4] gi|302440465|gb|EFL12281.1| predicted protein [Streptomyces sp. AA4] Length=673 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/127 (34%), Positives = 66/127 (52%), Gaps = 7/127 (5%) Query 532 IDQKDLDAMAYLASLPGARDTLIGNANTDGTAWMYAVAGLHPLWTHYD--YPLQQGPGYH 589 + ++ AM +L + D + N DGTAWMYA+ G+HP+ HYD P+ Y Sbjct 547 VSPDEIAAMDFLGRMHIPSDEKVLNDRLDGTAWMYALTGVHPVAGHYDGGGPVSPDATYL 606 Query 590 RFIFWAYGRNGESDPRVLEAIQVLRIRYILTSTPTV-RGFAVPDGLVSLETSRSWAKIYD 648 F R+ + D RV EA+Q L++R++L + ++ +G + GL L S +Y Sbjct 607 ALHF----RDYDVDVRVREAVQRLKVRHVLIGSGSIAKGAPIAPGLRDLMGSDFLRLVYR 662 Query 649 NGEARIY 655 N A+IY Sbjct 663 NPGAQIY 669 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 52/178 (30%), Positives = 88/178 (50%), Gaps = 14/178 (7%) Query 17 PGAMVARIAQLR-WPVAIAVGPALTYGVVALAIIPYGALGIPWNGWTALAALAVTCAVAT 75 PG ++ R A +R W +A + P L+Y V LA +G+P+N +TA A + VA Sbjct 27 PGGLIGRAAGVRGWALA-GLAPLLSYAVTGLAGPWLSTVGLPYNVFTASACTLLLAGVAW 85 Query 76 GL-QLLLAR-FRDLDAEALAV-----SRWPAVTVAAGVLLGALLIGWAAYRGIPHWQSIP 128 G+ +L L R + AE V ++W A ++ + +A G ++ Sbjct 86 GIRRLCLVRGWITPGAEEPPVAWSARAQWSVAACVAVATALSIAVVLSARGGT---TAVF 142 Query 129 STWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQLTGAA 186 WD V+HAN +R+I DTG S MG++ + +YP+ +H + A+ Q++G + Sbjct 143 QRWDTVFHANGIRYIADTGDGSLIGMGKINWYPDGS--FYPNGYHLVGALVYQISGTS 198 >gi|255326441|ref|ZP_05367523.1| conserved hypothetical protein [Rothia mucilaginosa ATCC 25296] gi|255296481|gb|EET75816.1| conserved hypothetical protein [Rothia mucilaginosa ATCC 25296] Length=667 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 160/702 (23%), Positives = 280/702 (40%), Gaps = 105/702 (14%) Query 8 LIALILLIAPGAMVARIAQLRWPVAIAVGPALTYGVVALAIIPYGALGIPWNGWTALAAL 67 L A++L PG + ++ + + P LT+ +VA++ I G GIPW+ + + Sbjct 11 LFAVVLAFGPGYAMGWALRIPARLRVFYAPLLTFALVAVSAIVLGKTGIPWSLISFVPVA 70 Query 68 AVTCAVATGLQLLLARFRDLDAEALAVSRWPAVTV-----AAGVLLGALLIGWAAYRGIP 122 AV A A GL L+ R ALA + WP V G +LG L+ + Sbjct 71 AVLVAAAAGLMWLVGR----RWPALASASWPGNDVPVAWPVVGAVLGGFLVLHMTEDMVY 126 Query 123 HWQSIPSTWDAVWHANTVRFILDTGQASSTHMGELRNVETHAPLYYPSVFHGLVAVFCQL 182 ++ + D +H N +R+I + G ASS +G + + P +YP+ +H V++ Sbjct 127 GPEAFSQSLDNSFHMNAIRWIQEHGDASSLTLGAVSAADQQ-PAFYPAGWHDFVSLIYST 185 Query 183 TGAAPTTGYTLSSLAASVWLFPVSAAVLTWRAVRSHPGALWSASCASAEWRAAGAAGTAA 242 G + T ++ L A+ L+P S + + P A Sbjct 186 MGTSIATATIVTVLLAAGILWPCSLVAFSLSIPKLRP----------------LQALAIP 229 Query 243 ALSASFTAVPYVEFDTAAM-PNLAAYGIAVPTMVLITSTL-------RHRDRIPVAVLAL 294 A+ F A P + + PNL Y + VP+ V + L + + + + AL Sbjct 230 AIIGGFAAFPGLLLRWGVLFPNLLGYAL-VPSFVALMVCLVQVMMRGEYAALLSLCLAAL 288 Query 295 VGVFSLHIT--GGIVVALLVSAWWLFEALRHPVRSRLADLLTLAGVAAMAGLVMLPQ--- 349 VGV L + +V A++ + + + VRSR +A+ GLV+L Sbjct 289 VGVAGLALVHPNAVVSAVVFALPLVLAGVAWVVRSRELASRQKWVRSALLGLVILGCVGA 348 Query 350 --FLSVRQQEDIIAGHAFPTYLSKKRGLFDAVF---QHSRHLND-FPVQYALIVLAAIG- 402 FL + A + + L++ L+ +F +++ L D F Y LA G Sbjct 349 WWFL----RPGASASNTWEPMLTEGEALYQFLFLGLENANQLRDTFNPSYLAGFLALWGA 404 Query 403 GLILLVKKIWWPLAVWLLL-IVMNVDAGTPLGGPIGGVAGALGEF-------FYHDPRRI 454 G +L + W +A W+L+ + V A P GEF +Y D R+ Sbjct 405 GYLLYKHRNLWLIASWVLIGYLWIVSASVP-----------RGEFRLLMVAPWYTDHFRL 453 Query 455 AAATTLLLMLMAGVALFATVM-LLVAAAKRLTDRFRPQPVSVWASATATLLIGAT----- 508 AA +++AG+ L V LL A+R P+P + AT+ +G Sbjct 454 AALVVFPSVILAGIGLGGFVEGLLTWVARR-----APRPARL---KVATVGMGVAMVLVL 505 Query 509 ----LVSAWHYFPRHRFLFGDKY----DSVMIDQKDLDAMAYLASLPGARDTLIGNANTD 560 L S +Y SV+++Q +++ + + + D ++ N D Sbjct 506 VVAGLSSRVPSVQETTLAVSQEYRVTPTSVVLNQDEMNVINEIPKIVPKGDVIVNNP-WD 564 Query 561 GTAWMYAVAGLHPLWTHYDYPLQQGPGYHRFIFWAYGRNGESDPRVLEAIQVLR------ 614 G+A++YA+A H T Y + + P Y + ++ ++P V + + Sbjct 565 GSAYIYALADRH--LTGYHFEFETSPKYSAIMH--NLKDARTNPEVCREVNKYKAHWYVH 620 Query 615 IRYILTSTPTVRGFAVPDGLVSLETSRSWAKIYDNGEARIYE 656 + L P + DGLV+ + +Y +G +Y Sbjct 621 LENQLNFGPDAQKNY--DGLVAAIDTDVLTPVYSSGPMTLYR 660 Lambda K H 0.325 0.137 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1547201094198 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40