BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv3781
Length=273
Score E
Sequences producing significant alignments: (Bits) Value
gi|15610917|ref|NP_218298.1| o-antigen/lipopolysaccharide transp... 554 5e-156
gi|340628751|ref|YP_004747203.1| putative O-antigen/lipopolysacc... 551 3e-155
gi|296166908|ref|ZP_06849325.1| O-antigen export system [Mycobac... 500 7e-140
gi|254822484|ref|ZP_05227485.1| hypothetical protein MintA_21296... 499 1e-139
gi|342860038|ref|ZP_08716690.1| hypothetical protein MCOL_14205 ... 498 4e-139
gi|15826947|ref|NP_301210.1| ABC transporter ATP-binding compone... 498 5e-139
gi|240168552|ref|ZP_04747211.1| O-antigen/lipopolysaccharide tra... 493 1e-137
gi|41406339|ref|NP_959175.1| hypothetical protein MAP0241c [Myco... 490 8e-137
gi|336461592|gb|EGO40458.1| ABC-type polysaccharide/polyol phosp... 488 3e-136
gi|183985304|ref|YP_001853595.1| O-antigen/lipopolysaccharide tr... 484 8e-135
gi|118615998|ref|YP_904330.1| O-antigen/lipopolysaccharide trans... 481 5e-134
gi|118469509|ref|YP_890579.1| O-antigen export system, ATP-bindi... 480 1e-133
gi|108801954|ref|YP_642151.1| ABC transporter-like protein [Myco... 477 9e-133
gi|126437935|ref|YP_001073626.1| ABC transporter-like protein [M... 477 1e-132
gi|333992721|ref|YP_004525335.1| O-antigen/lipopolysaccharide tr... 476 2e-132
gi|118463293|ref|YP_879531.1| O-antigen export system ATP-bindin... 473 1e-131
gi|120406560|ref|YP_956389.1| ABC transporter--like protein [Myc... 469 2e-130
gi|145221778|ref|YP_001132456.1| ABC transporter-like protein [M... 460 1e-127
gi|169627308|ref|YP_001700957.1| o-antigen/lipopolysaccharide tr... 453 1e-125
gi|111021097|ref|YP_704069.1| ABC O-antigen transporter ATP-bind... 442 2e-122
gi|226363387|ref|YP_002781169.1| ABC transporter ATP-binding pro... 441 4e-122
gi|226303748|ref|YP_002763706.1| ABC transporter ATP-binding pro... 441 5e-122
gi|54022182|ref|YP_116424.1| putative ABC transporter ATP-bindin... 439 3e-121
gi|312137750|ref|YP_004005086.1| ABC transporter ATPase [Rhodoco... 437 7e-121
gi|229492483|ref|ZP_04386286.1| ABC O-antigen transporter, ATP-b... 423 1e-116
gi|213965669|ref|ZP_03393862.1| teichoic acids export ATP-bindin... 414 6e-114
gi|319951242|ref|ZP_08025079.1| ABC-2 type transporter ATPase su... 414 6e-114
gi|343926178|ref|ZP_08765687.1| putative ABC transporter ATP-bin... 414 1e-113
gi|25026733|ref|NP_736787.1| putative O-antigen export system AT... 414 1e-113
gi|259508132|ref|ZP_05751032.1| O-antigen export system, ATP-bin... 413 2e-113
gi|326385011|ref|ZP_08206684.1| ABC transporter-like protein [Go... 413 2e-113
gi|145294324|ref|YP_001137145.1| hypothetical protein cgR_0279 [... 411 6e-113
gi|333917827|ref|YP_004491408.1| O-antigen export system [Amycol... 410 2e-112
gi|19551451|ref|NP_599453.1| ABC-type transporter, ATPase compon... 409 2e-112
gi|237786584|ref|YP_002907289.1| ABC transporter ATP-binding pro... 409 2e-112
gi|225020133|ref|ZP_03709325.1| hypothetical protein CORMATOL_00... 407 1e-111
gi|337289777|ref|YP_004628798.1| hypothetical protein CULC22_001... 406 2e-111
gi|172041626|ref|YP_001801340.1| putative ABC transport system, ... 405 3e-111
gi|38232799|ref|NP_938566.1| ABC transporter ATP-binding protein... 405 3e-111
gi|300857535|ref|YP_003782518.1| hypothetical protein cpfrc_0011... 405 3e-111
gi|336326657|ref|YP_004606623.1| ABC transporter ATP-binding pro... 405 5e-111
gi|300780056|ref|ZP_07089912.1| ABC superfamily ATP binding cass... 403 1e-110
gi|296141766|ref|YP_003649009.1| ABC transporter [Tsukamurella p... 402 2e-110
gi|227487365|ref|ZP_03917681.1| ABC superfamily ATP binding cass... 402 4e-110
gi|262200306|ref|YP_003271514.1| ABC transporter-like protein [G... 400 9e-110
gi|227506058|ref|ZP_03936107.1| ABC superfamily ATP binding cass... 400 2e-109
gi|227549573|ref|ZP_03979622.1| ABC superfamily ATP binding cass... 399 3e-109
gi|227831943|ref|YP_002833650.1| putative ABC transport system, ... 398 4e-109
gi|227502365|ref|ZP_03932414.1| ABC superfamily ATP binding cass... 394 1e-107
gi|255325758|ref|ZP_05366852.1| ABC O-antigen transporter, ATP-b... 394 1e-107
>gi|15610917|ref|NP_218298.1| o-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter RfbE [Mycobacterium tuberculosis H37Rv]
gi|15843404|ref|NP_338441.1| O-antigen export system, ATP-binding protein [Mycobacterium tuberculosis
CDC1551]
gi|31794954|ref|NP_857447.1| o-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter RfbE [Mycobacterium bovis AF2122/97]
78 more sequence titles
gi|121639698|ref|YP_979922.1| putative O-antigen/lipopolysaccharide transport ATP-binding protein
ABC transporter rfbE [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148663649|ref|YP_001285172.1| O-antigen/lipopolysaccharide ABC transporter ATP-binding protein
RfbE [Mycobacterium tuberculosis H37Ra]
gi|148824988|ref|YP_001289742.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis F11]
gi|167970944|ref|ZP_02553221.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis H37Ra]
gi|224992193|ref|YP_002646883.1| putative O-antigen/lipopolysaccharide transport ATP-binding protein
ABC transporter [Mycobacterium bovis BCG str. Tokyo 172]
gi|253800829|ref|YP_003033831.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis KZN 1435]
gi|254233275|ref|ZP_04926601.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis C]
gi|254366328|ref|ZP_04982372.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis str. Haarlem]
gi|254552896|ref|ZP_05143343.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|289441218|ref|ZP_06430962.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis T46]
gi|289445382|ref|ZP_06435126.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis CPHL_A]
gi|289556048|ref|ZP_06445258.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis KZN 605]
gi|289572030|ref|ZP_06452257.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis T17]
gi|289572433|ref|ZP_06452660.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis K85]
gi|289747623|ref|ZP_06507001.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis 02_1987]
gi|289748302|ref|ZP_06507680.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis T92]
gi|289755914|ref|ZP_06515292.1| O-antigen/lipopolysaccharide ABC transporter ATP-binding protein
RfbE [Mycobacterium tuberculosis EAS054]
gi|289759947|ref|ZP_06519325.1| O-antigen/lipopolysaccharide ABC transporter ATP-binding protein
RfbE [Mycobacterium tuberculosis T85]
gi|289763965|ref|ZP_06523343.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis GM 1503]
gi|294995305|ref|ZP_06800996.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis 210]
gi|297636463|ref|ZP_06954243.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis KZN 4207]
gi|297733457|ref|ZP_06962575.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis KZN R506]
gi|298527255|ref|ZP_07014664.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|306778143|ref|ZP_07416480.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu001]
gi|306778675|ref|ZP_07417012.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu002]
gi|306786697|ref|ZP_07425019.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu003]
gi|306791064|ref|ZP_07429386.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu004]
gi|306791383|ref|ZP_07429685.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu005]
gi|306795448|ref|ZP_07433750.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu006]
gi|306801423|ref|ZP_07438091.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu008]
gi|306805629|ref|ZP_07442297.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu007]
gi|306970025|ref|ZP_07482686.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu009]
gi|306974259|ref|ZP_07486920.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu010]
gi|307081967|ref|ZP_07491137.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu011]
gi|307086581|ref|ZP_07495694.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu012]
gi|313660788|ref|ZP_07817668.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis KZN V2475]
gi|339633777|ref|YP_004725419.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter RfbE [Mycobacterium africanum GM041182]
gi|1552864|emb|CAB02460.1| PROBABLE O-ANTIGEN/LIPOPOLYSACCHARIDE TRANSPORT ATP-BINDING PROTEIN
ABC TRANSPORTER RFBE [Mycobacterium tuberculosis H37Rv]
gi|13883770|gb|AAK48255.1| O-antigen export system, ATP-binding protein [Mycobacterium tuberculosis
CDC1551]
gi|31620552|emb|CAD95996.1| PROBABLE O-ANTIGEN/LIPOPOLYSACCHARIDE TRANSPORT ATP-BINDING PROTEIN
ABC TRANSPORTER RFBE [Mycobacterium bovis AF2122/97]
gi|121495346|emb|CAL73833.1| Probable O-antigen/lipopolysaccharide transport ATP-binding protein
ABC transporter rfbE [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|124603068|gb|EAY61343.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis C]
gi|134151840|gb|EBA43885.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis str. Haarlem]
gi|148507801|gb|ABQ75610.1| O-antigen/lipopolysaccharide ABC transporter ATP-binding protein
RfbE [Mycobacterium tuberculosis H37Ra]
gi|148723515|gb|ABR08140.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis F11]
gi|224775309|dbj|BAH28115.1| putative O-antigen/lipopolysaccharide transport ATP-binding protein
ABC transporter [Mycobacterium bovis BCG str. Tokyo 172]
gi|253322333|gb|ACT26936.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis KZN 1435]
gi|289414137|gb|EFD11377.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis T46]
gi|289418340|gb|EFD15541.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis CPHL_A]
gi|289440680|gb|EFD23173.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis KZN 605]
gi|289536864|gb|EFD41442.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis K85]
gi|289545784|gb|EFD49432.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis T17]
gi|289688151|gb|EFD55639.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis 02_1987]
gi|289688889|gb|EFD56318.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis T92]
gi|289696501|gb|EFD63930.1| O-antigen/lipopolysaccharide ABC transporter ATP-binding protein
RfbE [Mycobacterium tuberculosis EAS054]
gi|289711471|gb|EFD75487.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis GM 1503]
gi|289715511|gb|EFD79523.1| O-antigen/lipopolysaccharide ABC transporter ATP-binding protein
RfbE [Mycobacterium tuberculosis T85]
gi|298497049|gb|EFI32343.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
gi|308213664|gb|EFO73063.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu001]
gi|308328397|gb|EFP17248.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu002]
gi|308328801|gb|EFP17652.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu003]
gi|308332644|gb|EFP21495.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu004]
gi|308340136|gb|EFP28987.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu005]
gi|308344122|gb|EFP32973.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu006]
gi|308347924|gb|EFP36775.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu007]
gi|308351792|gb|EFP40643.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu008]
gi|308352575|gb|EFP41426.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu009]
gi|308356527|gb|EFP45378.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu010]
gi|308360475|gb|EFP49326.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu011]
gi|308363993|gb|EFP52844.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis SUMu012]
gi|323717648|gb|EGB26850.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis CDC1551A]
gi|326905621|gb|EGE52554.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis W-148]
gi|328460557|gb|AEB05980.1| O-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter rfbE [Mycobacterium tuberculosis KZN 4207]
gi|339296587|gb|AEJ48698.1| o-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter RfbE [Mycobacterium tuberculosis CCDC5079]
gi|339300186|gb|AEJ52296.1| o-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter RfbE [Mycobacterium tuberculosis CCDC5180]
gi|339333133|emb|CCC28865.1| putative O-antigen/lipopolysaccharide transport ATP-binding protein
ABC transporter RfbE [Mycobacterium africanum GM041182]
gi|341603719|emb|CCC66400.1| probable O-antigen/lipopolysaccharide transport ATP-binding protein
ABC transporter rfbE [Mycobacterium bovis BCG str. Moreau
RDJ]
gi|344221621|gb|AEN02252.1| o-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter RfbE [Mycobacterium tuberculosis CTRI-2]
Length=273
Score = 554 bits (1428), Expect = 5e-156, Method: Compositional matrix adjust.
Identities = 272/273 (99%), Positives = 273/273 (100%), Gaps = 0/273 (0%)
Query 1 VSDPHHPHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMEL 60
+SDPHHPHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMEL
Sbjct 1 MSDPHHPHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMEL 60
Query 61 NLGDRVGLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENI 120
NLGDRVGLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENI
Sbjct 61 NLGDRVGLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENI 120
Query 121 IIRGLFLGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILL 180
IIRGLFLGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILL
Sbjct 121 IIRGLFLGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILL 180
Query 181 LDEGIGAVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGG 240
LDEGIGAVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGG
Sbjct 181 LDEGIGAVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGG 240
Query 241 IEEVVRAYEGEDAARHVREVLAETQADRQNVQG 273
IEEVVRAYEGEDAARHVREVLAETQADRQNVQG
Sbjct 241 IEEVVRAYEGEDAARHVREVLAETQADRQNVQG 273
>gi|340628751|ref|YP_004747203.1| putative O-antigen/lipopolysaccharide transport ATP-binding protein
ABC transporter RFBE [Mycobacterium canettii CIPT 140010059]
gi|340006941|emb|CCC46132.1| putative O-antigen/lipopolysaccharide transport ATP-binding protein
ABC transporter RFBE [Mycobacterium canettii CIPT 140010059]
Length=273
Score = 551 bits (1421), Expect = 3e-155, Method: Compositional matrix adjust.
Identities = 271/273 (99%), Positives = 272/273 (99%), Gaps = 0/273 (0%)
Query 1 VSDPHHPHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMEL 60
+SDPHHPHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIG NNSNVVVIEALRDITMEL
Sbjct 1 MSDPHHPHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGCNNSNVVVIEALRDITMEL 60
Query 61 NLGDRVGLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENI 120
NLGDRVGLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENI
Sbjct 61 NLGDRVGLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENI 120
Query 121 IIRGLFLGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILL 180
IIRGLFLGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILL
Sbjct 121 IIRGLFLGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILL 180
Query 181 LDEGIGAVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGG 240
LDEGIGAVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGG
Sbjct 181 LDEGIGAVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGG 240
Query 241 IEEVVRAYEGEDAARHVREVLAETQADRQNVQG 273
IEEVVRAYEGEDAARHVREVLAETQADRQNVQG
Sbjct 241 IEEVVRAYEGEDAARHVREVLAETQADRQNVQG 273
>gi|296166908|ref|ZP_06849325.1| O-antigen export system [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897785|gb|EFG77374.1| O-antigen export system [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length=279
Score = 500 bits (1288), Expect = 7e-140, Method: Compositional matrix adjust.
Identities = 240/260 (93%), Positives = 256/260 (99%), Gaps = 0/260 (0%)
Query 7 PHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRV 66
PHI+THNAWVEFPIFDAKSRSLKKA LGKAGGTIGRN+SNVVV+EALRDITM L LGDRV
Sbjct 4 PHIETHNAWVEFPIFDAKSRSLKKAFLGKAGGTIGRNSSNVVVVEALRDITMSLELGDRV 63
Query 67 GLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF 126
GLVGHNGAGKSTLLRLLSGIYEPTRGWA+VTGRVAP+FDLG+GMDPEISGYENIIIRGLF
Sbjct 64 GLVGHNGAGKSTLLRLLSGIYEPTRGWAQVTGRVAPIFDLGVGMDPEISGYENIIIRGLF 123
Query 127 LGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 186
LGQTRKQM AKVDEIAEFTELG+YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEG+G
Sbjct 124 LGQTRKQMMAKVDEIAEFTELGDYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGLG 183
Query 187 AVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVR 246
AVDADF++KAQSRLQ+LVERSGILVFASHSNEFLARLCKTA+WIDHGVIR+AGGIE+VVR
Sbjct 184 AVDADFMKKAQSRLQSLVERSGILVFASHSNEFLARLCKTAMWIDHGVIRMAGGIEDVVR 243
Query 247 AYEGEDAARHVREVLAETQA 266
AYEGEDAARHVREVLAET++
Sbjct 244 AYEGEDAARHVREVLAETRS 263
>gi|254822484|ref|ZP_05227485.1| hypothetical protein MintA_21296 [Mycobacterium intracellulare
ATCC 13950]
Length=265
Score = 499 bits (1286), Expect = 1e-139, Method: Compositional matrix adjust.
Identities = 240/258 (94%), Positives = 253/258 (99%), Gaps = 0/258 (0%)
Query 7 PHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRV 66
PHI+THNAWVEFPIFDAKSRSLKKA LGKAGGTIGRNNSNVVV+EALRDITM L LGDRV
Sbjct 4 PHIKTHNAWVEFPIFDAKSRSLKKAFLGKAGGTIGRNNSNVVVVEALRDITMSLELGDRV 63
Query 67 GLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF 126
GLVGHNGAGKSTLLRLLSGIYEPTRGWA+VTGRVAP+FDLG+GMDPEISGYENIIIRGLF
Sbjct 64 GLVGHNGAGKSTLLRLLSGIYEPTRGWAQVTGRVAPIFDLGVGMDPEISGYENIIIRGLF 123
Query 127 LGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 186
LGQTRKQMQ+KVDEIAEFTELG+YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEG+G
Sbjct 124 LGQTRKQMQSKVDEIAEFTELGDYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGLG 183
Query 187 AVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVR 246
AVDADF++KAQSRLQ LVERSGILVFASHSNEFLARLCKTA+WIDHGVIR+ GGIE+VVR
Sbjct 184 AVDADFMKKAQSRLQGLVERSGILVFASHSNEFLARLCKTAMWIDHGVIRMTGGIEDVVR 243
Query 247 AYEGEDAARHVREVLAET 264
AYEGEDAARHVREVLAET
Sbjct 244 AYEGEDAARHVREVLAET 261
>gi|342860038|ref|ZP_08716690.1| hypothetical protein MCOL_14205 [Mycobacterium colombiense CECT
3035]
gi|342132416|gb|EGT85645.1| hypothetical protein MCOL_14205 [Mycobacterium colombiense CECT
3035]
Length=282
Score = 498 bits (1282), Expect = 4e-139, Method: Compositional matrix adjust.
Identities = 240/259 (93%), Positives = 253/259 (98%), Gaps = 0/259 (0%)
Query 7 PHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRV 66
PHI+THNAWVEFPIFDAKSRSLKKA LGKAGGTIGRN+SNVVV+EALRDITM L LGDRV
Sbjct 7 PHIETHNAWVEFPIFDAKSRSLKKAFLGKAGGTIGRNSSNVVVVEALRDITMSLELGDRV 66
Query 67 GLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF 126
GLVGHNGAGKSTLLRLLSGIYEPTRGWA VTGRVAPVFDLG+GMDPEISGYENIIIRGLF
Sbjct 67 GLVGHNGAGKSTLLRLLSGIYEPTRGWATVTGRVAPVFDLGVGMDPEISGYENIIIRGLF 126
Query 127 LGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 186
LGQTRKQMQ+KVDEIAEFTELG+YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEG+G
Sbjct 127 LGQTRKQMQSKVDEIAEFTELGDYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGLG 186
Query 187 AVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVR 246
AVDADFL+KAQSRLQ+LVERSGILVFASHSNEFLARLCKTA+WIDHGVIR++GGIE+VVR
Sbjct 187 AVDADFLKKAQSRLQSLVERSGILVFASHSNEFLARLCKTAMWIDHGVIRMSGGIEDVVR 246
Query 247 AYEGEDAARHVREVLAETQ 265
AYEGEDAARHVREVL E Q
Sbjct 247 AYEGEDAARHVREVLEEDQ 265
>gi|15826947|ref|NP_301210.1| ABC transporter ATP-binding component [Mycobacterium leprae TN]
gi|221229425|ref|YP_002502841.1| putative ABC transporter ATP-binding component [Mycobacterium
leprae Br4923]
gi|13092494|emb|CAC29622.1| putative ABC transporter ATP-binding component [Mycobacterium
leprae]
gi|219932532|emb|CAR70207.1| putative ABC transporter ATP-binding component [Mycobacterium
leprae Br4923]
Length=272
Score = 498 bits (1281), Expect = 5e-139, Method: Compositional matrix adjust.
Identities = 244/267 (92%), Positives = 257/267 (97%), Gaps = 1/267 (0%)
Query 7 PHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRV 66
PHI+T+NAWVEFPIFDAK+RSLKKAVLGKAGGTIGRNNSNVVVIEALRDITM L++GDRV
Sbjct 5 PHIETNNAWVEFPIFDAKARSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMSLSVGDRV 64
Query 67 GLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF 126
GLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF
Sbjct 65 GLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF 124
Query 127 LGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 186
LGQTRKQM KVDEIAEFTELG+YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG
Sbjct 125 LGQTRKQMLGKVDEIAEFTELGDYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 184
Query 187 AVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVR 246
+VD DFL+KAQSRLQ+LVERSGILVFASHSNEFLARLCKTA+WIDHGVI L+GGIE+VVR
Sbjct 185 SVDTDFLKKAQSRLQSLVERSGILVFASHSNEFLARLCKTAMWIDHGVIELSGGIEDVVR 244
Query 247 AYEGEDAARHVREVLAETQADRQNVQG 273
AYEGEDAARHVREV+AET A QN G
Sbjct 245 AYEGEDAARHVREVIAET-ASAQNASG 270
>gi|240168552|ref|ZP_04747211.1| O-antigen/lipopolysaccharide transport ATP- binding protein ABC
transporter RfbE [Mycobacterium kansasii ATCC 12478]
Length=280
Score = 493 bits (1269), Expect = 1e-137, Method: Compositional matrix adjust.
Identities = 240/258 (94%), Positives = 251/258 (98%), Gaps = 0/258 (0%)
Query 7 PHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRV 66
PHI+T +AWVEFPIFDAKSRSLKKA LGKAGG IGRN+SNVVVIEALRDITM L LGDRV
Sbjct 5 PHIETRDAWVEFPIFDAKSRSLKKAFLGKAGGAIGRNSSNVVVIEALRDITMSLELGDRV 64
Query 67 GLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF 126
GLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF
Sbjct 65 GLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF 124
Query 127 LGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 186
LGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG
Sbjct 125 LGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 184
Query 187 AVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVR 246
AVDA+FL+KAQSRLQ+LV+RSGILVFASHSNEFLARLCKTA+WIDHGVI+L GGIE+VVR
Sbjct 185 AVDAEFLKKAQSRLQSLVDRSGILVFASHSNEFLARLCKTAMWIDHGVIKLTGGIEDVVR 244
Query 247 AYEGEDAARHVREVLAET 264
AYEGEDAARHV +VLAET
Sbjct 245 AYEGEDAARHVHDVLAET 262
>gi|41406339|ref|NP_959175.1| hypothetical protein MAP0241c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41394687|gb|AAS02558.1| hypothetical protein MAP_0241c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=268
Score = 490 bits (1262), Expect = 8e-137, Method: Compositional matrix adjust.
Identities = 237/258 (92%), Positives = 250/258 (97%), Gaps = 0/258 (0%)
Query 7 PHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRV 66
PHI+T NAWVEFPIFDAKSRSLKKA LGKAGGTIGRN SNVVV+EALRDITM L LGDRV
Sbjct 7 PHIETRNAWVEFPIFDAKSRSLKKAFLGKAGGTIGRNTSNVVVVEALRDITMSLELGDRV 66
Query 67 GLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF 126
GLVGHNGAGKSTLLRLLSGIYEPTRGWA+VTGRVAP+FDLG+GMDPEISGYENIIIRGLF
Sbjct 67 GLVGHNGAGKSTLLRLLSGIYEPTRGWAQVTGRVAPIFDLGVGMDPEISGYENIIIRGLF 126
Query 127 LGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 186
LGQTRKQM AKVDEIAEFTELG+YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEG+G
Sbjct 127 LGQTRKQMLAKVDEIAEFTELGDYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGLG 186
Query 187 AVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVR 246
AVDADF++KAQSRLQ LVERSGILVFASHSNEFLARLCKTA+WIDHG IR++GGIE+VVR
Sbjct 187 AVDADFMKKAQSRLQGLVERSGILVFASHSNEFLARLCKTAMWIDHGQIRMSGGIEDVVR 246
Query 247 AYEGEDAARHVREVLAET 264
AYEGEDAARHVREVLAET
Sbjct 247 AYEGEDAARHVREVLAET 264
>gi|336461592|gb|EGO40458.1| ABC-type polysaccharide/polyol phosphate transport system, ATPase
component [Mycobacterium avium subsp. paratuberculosis
S397]
Length=268
Score = 488 bits (1257), Expect = 3e-136, Method: Compositional matrix adjust.
Identities = 236/258 (92%), Positives = 250/258 (97%), Gaps = 0/258 (0%)
Query 7 PHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRV 66
PHI+T NAWVEFPIFDAKSRSLKKA LGKAGGTIGRN SNVVV+EALRDITM L LGDRV
Sbjct 7 PHIETRNAWVEFPIFDAKSRSLKKAFLGKAGGTIGRNTSNVVVVEALRDITMSLELGDRV 66
Query 67 GLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF 126
GLVGHNGAGKSTLLRLLSGIYEPTRGWA+VTGRVAP+FDLG+GMDPEISGYENIIIRGLF
Sbjct 67 GLVGHNGAGKSTLLRLLSGIYEPTRGWAQVTGRVAPIFDLGVGMDPEISGYENIIIRGLF 126
Query 127 LGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 186
LGQTRKQM AKVDEIAEFTELG+YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEG+G
Sbjct 127 LGQTRKQMLAKVDEIAEFTELGDYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGLG 186
Query 187 AVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVR 246
AVDADF++KAQSRLQ LVERSGILVFASHSNEFLARLCKTA+WID+G IR++GGIE+VVR
Sbjct 187 AVDADFMKKAQSRLQGLVERSGILVFASHSNEFLARLCKTAMWIDYGQIRMSGGIEDVVR 246
Query 247 AYEGEDAARHVREVLAET 264
AYEGEDAARHVREVLAET
Sbjct 247 AYEGEDAARHVREVLAET 264
>gi|183985304|ref|YP_001853595.1| O-antigen/lipopolysaccharide transport ATP- binding protein ABC
transporter RfbE [Mycobacterium marinum M]
gi|183178630|gb|ACC43740.1| O-antigen/lipopolysaccharide transport ATP- binding protein ABC
transporter RfbE [Mycobacterium marinum M]
Length=280
Score = 484 bits (1245), Expect = 8e-135, Method: Compositional matrix adjust.
Identities = 238/261 (92%), Positives = 251/261 (97%), Gaps = 0/261 (0%)
Query 7 PHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRV 66
P I+T +AWVEFPIFDAKSRSLKKA LGKAGG+IGRN+SNVVVIEALRDITM L GDRV
Sbjct 5 PRIETRDAWVEFPIFDAKSRSLKKAFLGKAGGSIGRNSSNVVVIEALRDITMSLEHGDRV 64
Query 67 GLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF 126
GLVGHNGAGKSTLLRLLSGIYEPTRG AKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF
Sbjct 65 GLVGHNGAGKSTLLRLLSGIYEPTRGLAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF 124
Query 127 LGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 186
LGQTRKQM AKVDEIAEFTELG+YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG
Sbjct 125 LGQTRKQMLAKVDEIAEFTELGDYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 184
Query 187 AVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVR 246
AVDA+FL+KAQSRLQ+LVERSGILVFASHSNEFLARLCKTA+WIDHG I+L+GGIE+VVR
Sbjct 185 AVDAEFLKKAQSRLQSLVERSGILVFASHSNEFLARLCKTAMWIDHGEIKLSGGIEDVVR 244
Query 247 AYEGEDAARHVREVLAETQAD 267
AYEGEDAARHVR+VLAETQ D
Sbjct 245 AYEGEDAARHVRDVLAETQRD 265
>gi|118615998|ref|YP_904330.1| O-antigen/lipopolysaccharide transport ATP- binding protein ABC
transporter RfbE [Mycobacterium ulcerans Agy99]
gi|118568108|gb|ABL02859.1| O-antigen/lipopolysaccharide transport ATP- binding protein ABC
transporter RfbE [Mycobacterium ulcerans Agy99]
Length=280
Score = 481 bits (1238), Expect = 5e-134, Method: Compositional matrix adjust.
Identities = 237/261 (91%), Positives = 250/261 (96%), Gaps = 0/261 (0%)
Query 7 PHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRV 66
P I+T +AWVEFPIFDAKSRSLKKA LGKAGG+IGRN+SNVVVIEALRDITM L GDRV
Sbjct 5 PRIETRDAWVEFPIFDAKSRSLKKAFLGKAGGSIGRNSSNVVVIEALRDITMSLEHGDRV 64
Query 67 GLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF 126
GLVGHNGAGKSTLLRLLSGIYEPTRG AKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF
Sbjct 65 GLVGHNGAGKSTLLRLLSGIYEPTRGLAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF 124
Query 127 LGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 186
LGQTRKQM AKVDEIAEFTELG+YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG
Sbjct 125 LGQTRKQMLAKVDEIAEFTELGDYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 184
Query 187 AVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVR 246
AVDA FL+KAQSRLQ+LVERSGILVFASHSNEFLARLCKTA+WIDHG I+L+GGI++VVR
Sbjct 185 AVDAGFLKKAQSRLQSLVERSGILVFASHSNEFLARLCKTAMWIDHGEIKLSGGIKDVVR 244
Query 247 AYEGEDAARHVREVLAETQAD 267
AYEGEDAARHVR+VLAETQ D
Sbjct 245 AYEGEDAARHVRDVLAETQRD 265
>gi|118469509|ref|YP_890579.1| O-antigen export system, ATP-binding protein [Mycobacterium smegmatis
str. MC2 155]
gi|118170796|gb|ABK71692.1| O-antigen export system, ATP-binding protein [Mycobacterium smegmatis
str. MC2 155]
Length=269
Score = 480 bits (1235), Expect = 1e-133, Method: Compositional matrix adjust.
Identities = 234/261 (90%), Positives = 246/261 (95%), Gaps = 0/261 (0%)
Query 7 PHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRV 66
P I+T +AWVEFPIFDAK+RSLKKA LGKAGG IGRN SNVVVIEALRDITM L +GDRV
Sbjct 7 PRIETRDAWVEFPIFDAKTRSLKKAFLGKAGGAIGRNQSNVVVIEALRDITMSLEMGDRV 66
Query 67 GLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF 126
GLVGHNGAGKSTLLRLLSGIYEPTRG A V+GRVAPVFDLG+GMDPEISG+ENIIIRGLF
Sbjct 67 GLVGHNGAGKSTLLRLLSGIYEPTRGSATVSGRVAPVFDLGVGMDPEISGFENIIIRGLF 126
Query 127 LGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 186
LGQTRKQM AKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG
Sbjct 127 LGQTRKQMLAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 186
Query 187 AVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVR 246
AVDA+FL+KAQSRLQ+LVERSGILVFASHSNEFLARLCKTA+WIDHG IR+ GGIEEVVR
Sbjct 187 AVDAEFLKKAQSRLQDLVERSGILVFASHSNEFLARLCKTAMWIDHGTIRMTGGIEEVVR 246
Query 247 AYEGEDAARHVREVLAETQAD 267
AYEGEDAARHVREVL ET D
Sbjct 247 AYEGEDAARHVREVLEETARD 267
>gi|108801954|ref|YP_642151.1| ABC transporter-like protein [Mycobacterium sp. MCS]
gi|119871106|ref|YP_941058.1| ABC transporter-like protein [Mycobacterium sp. KMS]
gi|108772373|gb|ABG11095.1| ABC transporter related protein [Mycobacterium sp. MCS]
gi|119697195|gb|ABL94268.1| ABC transporter related protein [Mycobacterium sp. KMS]
Length=273
Score = 477 bits (1227), Expect = 9e-133, Method: Compositional matrix adjust.
Identities = 233/261 (90%), Positives = 247/261 (95%), Gaps = 0/261 (0%)
Query 7 PHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRV 66
P I+T +AWVEFPIFDAK+RSLKKA LGKAGG IGRN+SNVVVIEALRDITM L LGDRV
Sbjct 4 PRIETRDAWVEFPIFDAKTRSLKKAFLGKAGGAIGRNDSNVVVIEALRDITMSLELGDRV 63
Query 67 GLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF 126
GLVGHNGAGKSTLLRLLSGIYEPTRG A VTGRVAPVFDLG+GMDPEISGYENIIIRGLF
Sbjct 64 GLVGHNGAGKSTLLRLLSGIYEPTRGSATVTGRVAPVFDLGVGMDPEISGYENIIIRGLF 123
Query 127 LGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 186
LGQTRKQM AKVDEIAEFTELG+YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG
Sbjct 124 LGQTRKQMLAKVDEIAEFTELGDYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 183
Query 187 AVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVR 246
AVDADFL+KAQSRLQ+LVERSGILVFASHSNEFLARLCKTA+WIDHG +++ GGIE+VVR
Sbjct 184 AVDADFLKKAQSRLQSLVERSGILVFASHSNEFLARLCKTAMWIDHGTVKMTGGIEDVVR 243
Query 247 AYEGEDAARHVREVLAETQAD 267
AYEGEDAARHVREVL E + D
Sbjct 244 AYEGEDAARHVREVLDEHRGD 264
>gi|126437935|ref|YP_001073626.1| ABC transporter-like protein [Mycobacterium sp. JLS]
gi|126237735|gb|ABO01136.1| ABC transporter related protein [Mycobacterium sp. JLS]
Length=295
Score = 477 bits (1227), Expect = 1e-132, Method: Compositional matrix adjust.
Identities = 233/261 (90%), Positives = 246/261 (95%), Gaps = 0/261 (0%)
Query 7 PHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRV 66
P I+T +AWVEFPIFDAK+RSLKKA LGKAGG IGRN SNVVVIEALRDITM L LGDRV
Sbjct 4 PRIETRDAWVEFPIFDAKTRSLKKAFLGKAGGAIGRNGSNVVVIEALRDITMSLELGDRV 63
Query 67 GLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF 126
GLVGHNGAGKSTLLRLLSGIYEPTRG A VTGRVAPVFDLG+GMDPEISGYENIIIRGLF
Sbjct 64 GLVGHNGAGKSTLLRLLSGIYEPTRGSATVTGRVAPVFDLGVGMDPEISGYENIIIRGLF 123
Query 127 LGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 186
LGQTRKQM AKVDEIAEFTELG+YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG
Sbjct 124 LGQTRKQMLAKVDEIAEFTELGDYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 183
Query 187 AVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVR 246
AVDADFL+KAQSRLQ+LVERSGILVFASHSNEFLARLCKTA+WIDHG +++ GGIE+VVR
Sbjct 184 AVDADFLKKAQSRLQSLVERSGILVFASHSNEFLARLCKTAMWIDHGTVKMTGGIEDVVR 243
Query 247 AYEGEDAARHVREVLAETQAD 267
AYEGEDAARHVREVL E + D
Sbjct 244 AYEGEDAARHVREVLDEHRGD 264
>gi|333992721|ref|YP_004525335.1| O-antigen/lipopolysaccharide transport ATP- binding protein ABC
transporter RfbE [Mycobacterium sp. JDM601]
gi|333488689|gb|AEF38081.1| O-antigen/lipopolysaccharide transport ATP- binding protein ABC
transporter RfbE [Mycobacterium sp. JDM601]
Length=267
Score = 476 bits (1224), Expect = 2e-132, Method: Compositional matrix adjust.
Identities = 230/259 (89%), Positives = 246/259 (95%), Gaps = 0/259 (0%)
Query 7 PHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRV 66
P+I+T +AWVEFPIFDAKSRSLKKA LGKAGG IGRNNSNVVV+EALRDITM L+LGDRV
Sbjct 6 PYIETRDAWVEFPIFDAKSRSLKKAFLGKAGGAIGRNNSNVVVVEALRDITMSLSLGDRV 65
Query 67 GLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLF 126
GLVGHNGAGKSTLLRLLSGIYEPTRG A V GRVAPVFDLG+GMDPEISGYENIIIRGLF
Sbjct 66 GLVGHNGAGKSTLLRLLSGIYEPTRGSATVVGRVAPVFDLGVGMDPEISGYENIIIRGLF 125
Query 127 LGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 186
LGQTRKQM AKVDEIAEFTELG+YL+MPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG
Sbjct 126 LGQTRKQMAAKVDEIAEFTELGDYLAMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIG 185
Query 187 AVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVR 246
AVDA+FL+KAQ+RLQ LVERSGILVFASHSNEFLARLCKTA+WIDHG +++ GGIEEVV
Sbjct 186 AVDAEFLKKAQTRLQKLVERSGILVFASHSNEFLARLCKTAMWIDHGTVKMTGGIEEVVG 245
Query 247 AYEGEDAARHVREVLAETQ 265
AYEG DAARHVREVLAET+
Sbjct 246 AYEGPDAARHVREVLAETR 264
>gi|118463293|ref|YP_879531.1| O-antigen export system ATP-binding protein RfbB [Mycobacterium
avium 104]
gi|254773296|ref|ZP_05214812.1| O-antigen export system ATP-binding protein RfbB [Mycobacterium
avium subsp. avium ATCC 25291]
gi|118164580|gb|ABK65477.1| O-antigen export system ATP-binding protein RfbB [Mycobacterium
avium 104]
Length=253
Score = 473 bits (1217), Expect = 1e-131, Method: Compositional matrix adjust.
Identities = 230/249 (93%), Positives = 243/249 (98%), Gaps = 0/249 (0%)
Query 16 VEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGLVGHNGAG 75
+EFPIFDAKSRSLKKA LGKAGGTIGRNNSNVVV+EALRDITM L LGDRVGLVGHNGAG
Sbjct 1 MEFPIFDAKSRSLKKAFLGKAGGTIGRNNSNVVVVEALRDITMSLELGDRVGLVGHNGAG 60
Query 76 KSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLGQTRKQMQ 135
KSTLLRLLSGIYEPTRGWA+VTGRVAP+FDLG+GMDPEISGYENIIIRGLFLGQTRKQM
Sbjct 61 KSTLLRLLSGIYEPTRGWAQVTGRVAPIFDLGVGMDPEISGYENIIIRGLFLGQTRKQML 120
Query 136 AKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAVDADFLRK 195
AKVDEIAEFTELG+YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEG+GAVDADF++K
Sbjct 121 AKVDEIAEFTELGDYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGLGAVDADFMKK 180
Query 196 AQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAYEGEDAAR 255
AQSRLQ LVERSGILVFASHSNEFLARLCKTA+WIDHG IR++GGIE+VVRAYEGEDAAR
Sbjct 181 AQSRLQGLVERSGILVFASHSNEFLARLCKTAMWIDHGEIRMSGGIEDVVRAYEGEDAAR 240
Query 256 HVREVLAET 264
HVREVLAET
Sbjct 241 HVREVLAET 249
>gi|120406560|ref|YP_956389.1| ABC transporter--like protein [Mycobacterium vanbaalenii PYR-1]
gi|119959378|gb|ABM16383.1| ABC transporter-related protein [Mycobacterium vanbaalenii PYR-1]
Length=269
Score = 469 bits (1208), Expect = 2e-130, Method: Compositional matrix adjust.
Identities = 228/261 (88%), Positives = 243/261 (94%), Gaps = 0/261 (0%)
Query 4 PHHPHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLG 63
P P+I+T NAWVEFPIFDAK+RSLKKA LGKAGG IGRN SNVVVIEALRDITM L +G
Sbjct 3 PDEPYIETRNAWVEFPIFDAKTRSLKKAFLGKAGGAIGRNESNVVVIEALRDITMSLKMG 62
Query 64 DRVGLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIR 123
DRVGLVGHNGAGKSTLLRLLSGIYEPTRG A V GRVAPVFDLG+GMDPEISG+ENIIIR
Sbjct 63 DRVGLVGHNGAGKSTLLRLLSGIYEPTRGVATVRGRVAPVFDLGVGMDPEISGFENIIIR 122
Query 124 GLFLGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDE 183
GLFLGQTRKQM +KVDEIAEFTELG+YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDE
Sbjct 123 GLFLGQTRKQMMSKVDEIAEFTELGDYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDE 182
Query 184 GIGAVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEE 243
GIGAVDA+FL+KAQ+RL +LVERSGILVFASHSNEFLARLC TA+WIDHG I++ GGIEE
Sbjct 183 GIGAVDAEFLKKAQTRLADLVERSGILVFASHSNEFLARLCNTAMWIDHGTIKMEGGIEE 242
Query 244 VVRAYEGEDAARHVREVLAET 264
VVR YEGEDAARHVREVL ET
Sbjct 243 VVRGYEGEDAARHVREVLEET 263
>gi|145221778|ref|YP_001132456.1| ABC transporter-like protein [Mycobacterium gilvum PYR-GCK]
gi|315446484|ref|YP_004079363.1| ABC-type polysaccharide/polyol phosphate transport system, ATPase
component [Mycobacterium sp. Spyr1]
gi|145214264|gb|ABP43668.1| ABC transporter related protein [Mycobacterium gilvum PYR-GCK]
gi|315264787|gb|ADU01529.1| ABC-type polysaccharide/polyol phosphate transport system, ATPase
component [Mycobacterium sp. Spyr1]
Length=272
Score = 460 bits (1183), Expect = 1e-127, Method: Compositional matrix adjust.
Identities = 226/265 (86%), Positives = 245/265 (93%), Gaps = 2/265 (0%)
Query 6 HPHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDR 65
P I+T NAWVEFPIFDAK+RSLKKA LGKAGG IGRN+SNVVVIEALRDIT+ L +GDR
Sbjct 7 EPFIETRNAWVEFPIFDAKTRSLKKAFLGKAGGAIGRNDSNVVVIEALRDITLSLKMGDR 66
Query 66 VGLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGL 125
VGLVGHNGAGKSTLLRLLSGIYEPTRG A+V GRVAPVFDLG+GMDPEISG+ENIIIRGL
Sbjct 67 VGLVGHNGAGKSTLLRLLSGIYEPTRGVAEVRGRVAPVFDLGVGMDPEISGFENIIIRGL 126
Query 126 FLGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGI 185
FLGQTRKQM AKVDEIAEFTELG+YL+MPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGI
Sbjct 127 FLGQTRKQMLAKVDEIAEFTELGDYLNMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGI 186
Query 186 GAVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVV 245
GAVDA+FL+KAQ+RL +LV RSGILVFASHSNEFLARLC TA+WIDHG IR+ G IE+VV
Sbjct 187 GAVDAEFLKKAQTRLADLVARSGILVFASHSNEFLARLCDTAMWIDHGTIRMQGEIEDVV 246
Query 246 RAYEGEDAARHVREVLAETQADRQN 270
RAYEGEDAARHVREVL E + R+N
Sbjct 247 RAYEGEDAARHVREVLEENK--REN 269
>gi|169627308|ref|YP_001700957.1| o-antigen/lipopolysaccharide transport ATP-binding protein ABC
transporter RfbE [Mycobacterium abscessus ATCC 19977]
gi|169239275|emb|CAM60303.1| Probable o-antigen/lipopolysaccharide transport ATP-binding protein
ABC transporter RfbE [Mycobacterium abscessus]
Length=263
Score = 453 bits (1166), Expect = 1e-125, Method: Compositional matrix adjust.
Identities = 219/259 (85%), Positives = 239/259 (93%), Gaps = 0/259 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
IQTH AWVEFPIFDAKSRSLKKA LGKAGG IGRN SNVVVIEALRDIT+ L GDRVGL
Sbjct 4 IQTHQAWVEFPIFDAKSRSLKKAFLGKAGGAIGRNESNVVVIEALRDITLSLKEGDRVGL 63
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG + + GRVAPVFDLG+GMDPEISGYENIIIRG+FLG
Sbjct 64 VGHNGAGKSTLLRLLSGIYEPTRGSSYIKGRVAPVFDLGVGMDPEISGYENIIIRGMFLG 123
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QTRKQMQAKVDEIA+FTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV
Sbjct 124 QTRKQMQAKVDEIADFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 183
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA+F++KA+ RLQ LVERSG+LVFASHSNEFLARLC TA+WIDHG I+++GGIE+VVRAY
Sbjct 184 DAEFMKKARIRLQQLVERSGMLVFASHSNEFLARLCNTAMWIDHGTIKMSGGIEDVVRAY 243
Query 249 EGEDAARHVREVLAETQAD 267
EG++A HV ++LAE D
Sbjct 244 EGDEAGDHVAQILAEDAHD 262
>gi|111021097|ref|YP_704069.1| ABC O-antigen transporter ATP-binding protein [Rhodococcus jostii
RHA1]
gi|110820627|gb|ABG95911.1| ABC O-antigen transporter, ATP-binding component [Rhodococcus
jostii RHA1]
Length=298
Score = 442 bits (1137), Expect = 2e-122, Method: Compositional matrix adjust.
Identities = 216/267 (81%), Positives = 239/267 (90%), Gaps = 0/267 (0%)
Query 5 HHPHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGD 64
H I+T +A V+FPIFDAKSRSLKKA LGKAGG+IGRNNS+VVV+EALRDI + L GD
Sbjct 3 EHVSIETRDACVDFPIFDAKSRSLKKAFLGKAGGSIGRNNSDVVVVEALRDINLSLKEGD 62
Query 65 RVGLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRG 124
R+GLVGHNGAGKSTLLRLLSGIYEPTRG A + GRVAPVFDLG+GMDPEISGYENIIIRG
Sbjct 63 RIGLVGHNGAGKSTLLRLLSGIYEPTRGSASIRGRVAPVFDLGVGMDPEISGYENIIIRG 122
Query 125 LFLGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEG 184
LFLGQTRKQM AK+DEIAEFTELGEYLSMPLRTYSTGMRVR+AMGVVTSIDPEILLLDEG
Sbjct 123 LFLGQTRKQMLAKMDEIAEFTELGEYLSMPLRTYSTGMRVRVAMGVVTSIDPEILLLDEG 182
Query 185 IGAVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEV 244
IGAVDA+F++KA+ RLQ LVERSGILVFASHSNEFLA+LC TA+WIDHG IR GGIE+V
Sbjct 183 IGAVDAEFMKKARVRLQALVERSGILVFASHSNEFLAQLCDTAMWIDHGRIRQQGGIEDV 242
Query 245 VRAYEGEDAARHVREVLAETQADRQNV 271
VRAYEG+DAA HVR V+ E ++ V
Sbjct 243 VRAYEGDDAADHVRHVIYELDREKSGV 269
>gi|226363387|ref|YP_002781169.1| ABC transporter ATP-binding protein [Rhodococcus opacus B4]
gi|226241876|dbj|BAH52224.1| putative ABC transporter ATP-binding protein [Rhodococcus opacus
B4]
Length=298
Score = 441 bits (1135), Expect = 4e-122, Method: Compositional matrix adjust.
Identities = 215/268 (81%), Positives = 238/268 (89%), Gaps = 0/268 (0%)
Query 5 HHPHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGD 64
H I+T +A V+FPIFDAKSRSLKKA LGKAGG+IGRNNS+VVV+EALRDI + L GD
Sbjct 3 EHVSIETRDACVDFPIFDAKSRSLKKAFLGKAGGSIGRNNSDVVVVEALRDINLSLKEGD 62
Query 65 RVGLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRG 124
R+GLVGHNGAGKSTLLRLLSGIYEPTRG A + GRVAPVFDLG+GMDPEISGYENIIIRG
Sbjct 63 RIGLVGHNGAGKSTLLRLLSGIYEPTRGSASIRGRVAPVFDLGVGMDPEISGYENIIIRG 122
Query 125 LFLGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEG 184
LFLGQTRKQM AK+DEIAEFTELGEYLSMPLRTYSTGMRVR+AMGVVTSIDPEILLLDEG
Sbjct 123 LFLGQTRKQMLAKMDEIAEFTELGEYLSMPLRTYSTGMRVRVAMGVVTSIDPEILLLDEG 182
Query 185 IGAVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEV 244
IGAVDA+F++KA+ RLQ LVERSGILVFASHSNEFLA+LC A+WIDHG IR GGIEEV
Sbjct 183 IGAVDAEFMKKARVRLQALVERSGILVFASHSNEFLAQLCDRAMWIDHGQIRQQGGIEEV 242
Query 245 VRAYEGEDAARHVREVLAETQADRQNVQ 272
VRAYEG+DAA HVR V+ E ++ +
Sbjct 243 VRAYEGDDAADHVRHVIYEMDREKSGLS 270
>gi|226303748|ref|YP_002763706.1| ABC transporter ATP-binding protein [Rhodococcus erythropolis
PR4]
gi|226182863|dbj|BAH30967.1| putative ABC transporter ATP-binding protein [Rhodococcus erythropolis
PR4]
Length=268
Score = 441 bits (1135), Expect = 5e-122, Method: Compositional matrix adjust.
Identities = 214/265 (81%), Positives = 240/265 (91%), Gaps = 2/265 (0%)
Query 6 HPHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDR 65
H +I THNA V+FPIFDAKSRS+KKA LGKAGG IGRN+S+VVV+EAL+DITM L GDR
Sbjct 4 HVNISTHNACVDFPIFDAKSRSMKKAFLGKAGGAIGRNSSDVVVVEALKDITMTLKEGDR 63
Query 66 VGLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGL 125
VGLVGHNGAGKSTLLRLLSGIYEPTRG A + GRVAPVFDLG+GMDPEISGYENIIIRGL
Sbjct 64 VGLVGHNGAGKSTLLRLLSGIYEPTRGSATIRGRVAPVFDLGVGMDPEISGYENIIIRGL 123
Query 126 FLGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGI 185
FLGQTRKQM AK+DEIA+FTELG+YL MPLRTYSTGMRVR+AMGVVTSIDPEILLLDEGI
Sbjct 124 FLGQTRKQMLAKMDEIADFTELGDYLDMPLRTYSTGMRVRIAMGVVTSIDPEILLLDEGI 183
Query 186 GAVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVV 245
GAVDA+F++KA+ RLQ LVERSGILVFASHSNEFLA+LC +A+WIDHG IR+ G IE+VV
Sbjct 184 GAVDAEFMKKARVRLQKLVERSGILVFASHSNEFLAQLCNSAMWIDHGQIRMQGDIEDVV 243
Query 246 RAYEGEDAARHVREVLAETQADRQN 270
RAYEG+DAA HVR V+ E + R+N
Sbjct 244 RAYEGDDAAEHVRHVIKEME--REN 266
>gi|54022182|ref|YP_116424.1| putative ABC transporter ATP-binding protein [Nocardia farcinica
IFM 10152]
gi|54013690|dbj|BAD55060.1| putative ABC transporter ATP-binding protein [Nocardia farcinica
IFM 10152]
Length=283
Score = 439 bits (1128), Expect = 3e-121, Method: Compositional matrix adjust.
Identities = 214/260 (83%), Positives = 233/260 (90%), Gaps = 0/260 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I TH AWVEFPIFDAKSRSLKKA LGKAGG IGRN S+VVV+EALRDI + L GDR+GL
Sbjct 6 IDTHQAWVEFPIFDAKSRSLKKAFLGKAGGAIGRNQSDVVVVEALRDINLSLREGDRIGL 65
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEP+RG A++ GRVAPVFDLG+GMDPEISGYENIIIRGLFLG
Sbjct 66 VGHNGAGKSTLLRLLSGIYEPSRGSARIRGRVAPVFDLGVGMDPEISGYENIIIRGLFLG 125
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QTRKQM +K+DEIA+FTELGEYL MPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV
Sbjct 126 QTRKQMMSKIDEIADFTELGEYLHMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 185
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA+F++KA+ RLQ LV RSGILVFASHSNEFLA+LC +A+WIDHG IRL GGIEEVVRAY
Sbjct 186 DAEFMKKARLRLQELVARSGILVFASHSNEFLAQLCDSALWIDHGQIRLRGGIEEVVRAY 245
Query 249 EGEDAARHVREVLAETQADR 268
EG DA HV VL E A+R
Sbjct 246 EGPDAGNHVATVLREMAAER 265
>gi|312137750|ref|YP_004005086.1| ABC transporter ATPase [Rhodococcus equi 103S]
gi|325675098|ref|ZP_08154784.1| O-antigen export ABC superfamily ATP binding cassette transporter,
ABC protein [Rhodococcus equi ATCC 33707]
gi|311887089|emb|CBH46398.1| putative ABC-2 type transporter ATPase subunit [Rhodococcus equi
103S]
gi|325554059|gb|EGD23735.1| O-antigen export ABC superfamily ATP binding cassette transporter,
ABC protein [Rhodococcus equi ATCC 33707]
Length=272
Score = 437 bits (1125), Expect = 7e-121, Method: Compositional matrix adjust.
Identities = 211/257 (83%), Positives = 239/257 (93%), Gaps = 0/257 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I+T NA V+FPIFDAKSRSLKKA LGKAGG+IGRN+S+V+V+EAL+DIT+ L GDRVGL
Sbjct 7 IETRNACVDFPIFDAKSRSLKKAFLGKAGGSIGRNDSDVIVVEALKDITLSLKEGDRVGL 66
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A+V GRVAPVFDLG+GMDPEISGYENIIIRGLFLG
Sbjct 67 VGHNGAGKSTLLRLLSGIYEPTRGSARVRGRVAPVFDLGVGMDPEISGYENIIIRGLFLG 126
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QTRKQM AK+DEIA+FTELGEYLSMPLRTYSTGMRVR+AMGVVTSIDPEILLLDEGIGAV
Sbjct 127 QTRKQMLAKMDEIADFTELGEYLSMPLRTYSTGMRVRVAMGVVTSIDPEILLLDEGIGAV 186
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA+F++KA+ RLQ LVERSGILVFASHSNEFLA+LC +A+WIDHG +R G IE+VVRAY
Sbjct 187 DAEFMKKARIRLQKLVERSGILVFASHSNEFLAQLCDSAMWIDHGQVRQHGEIEDVVRAY 246
Query 249 EGEDAARHVREVLAETQ 265
EG+DAA HVR+V+A+ +
Sbjct 247 EGDDAADHVRQVIADMK 263
>gi|229492483|ref|ZP_04386286.1| ABC O-antigen transporter, ATP-binding component [Rhodococcus
erythropolis SK121]
gi|229320469|gb|EEN86287.1| ABC O-antigen transporter, ATP-binding component [Rhodococcus
erythropolis SK121]
Length=280
Score = 423 bits (1088), Expect = 1e-116, Method: Compositional matrix adjust.
Identities = 202/257 (79%), Positives = 233/257 (91%), Gaps = 0/257 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I+T A V+FPIFDAKSRSLKKA LG+AGG IGRN+S+VVV+EALRD+T+ L GDR+GL
Sbjct 7 IETRGACVDFPIFDAKSRSLKKAFLGRAGGAIGRNDSDVVVVEALRDVTLSLKEGDRIGL 66
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A + GRVAPVFDLG+GMDPEISGYENIIIRG+FLG
Sbjct 67 VGHNGAGKSTLLRLLSGIYEPTRGSAAIRGRVAPVFDLGVGMDPEISGYENIIIRGMFLG 126
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
TRKQM AK+DEIA+FTELG+YLSMPLRTYSTGMRVR+A+GVVTSIDPEILLLDEGIGAV
Sbjct 127 MTRKQMLAKMDEIADFTELGDYLSMPLRTYSTGMRVRVALGVVTSIDPEILLLDEGIGAV 186
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA+F++KA++RLQ+LV+RSGILVFASHSNEFLA+LC A+WIDHG +R +GGIEE+VRAY
Sbjct 187 DAEFMKKARTRLQDLVKRSGILVFASHSNEFLAQLCDRAMWIDHGTVRQSGGIEEIVRAY 246
Query 249 EGEDAARHVREVLAETQ 265
EG DA HV V+ E +
Sbjct 247 EGNDAGDHVAHVIREME 263
>gi|213965669|ref|ZP_03393862.1| teichoic acids export ATP-binding protein TagH [Corynebacterium
amycolatum SK46]
gi|213951620|gb|EEB63009.1| teichoic acids export ATP-binding protein TagH [Corynebacterium
amycolatum SK46]
Length=260
Score = 414 bits (1065), Expect = 6e-114, Method: Compositional matrix adjust.
Identities = 202/255 (80%), Positives = 229/255 (90%), Gaps = 0/255 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I T+NA V+FPIFDAKSRS+KKA LG AGG IGRN+SNVVVIEAL+DI + L GDRVGL
Sbjct 4 IDTYNACVDFPIFDAKSRSMKKAFLGAAGGAIGRNDSNVVVIEALKDINIHLREGDRVGL 63
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A V GRVAPVFDLG+GMDPEISG ENIIIRGLFLG
Sbjct 64 VGHNGAGKSTLLRLLSGIYEPTRGAADVRGRVAPVFDLGVGMDPEISGLENIIIRGLFLG 123
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QTRKQM++K+DEIAEFTELG+YL MPLRTYSTGMRVRLA+GVVTSI+PEILLLDEGIGAV
Sbjct 124 QTRKQMKSKLDEIAEFTELGDYLHMPLRTYSTGMRVRLALGVVTSIEPEILLLDEGIGAV 183
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA F+ KA+++L LV+RSG+LVFASHSNEFLA+LC TA+WIDHG +R AG ++EVV AY
Sbjct 184 DAAFMAKARTKLTELVDRSGLLVFASHSNEFLAQLCDTALWIDHGTVRQAGLVDEVVEAY 243
Query 249 EGEDAARHVREVLAE 263
EG++AA VR VLA+
Sbjct 244 EGKEAADQVRRVLAQ 258
>gi|319951242|ref|ZP_08025079.1| ABC-2 type transporter ATPase subunit [Dietzia cinnamea P4]
gi|319435098|gb|EFV90381.1| ABC-2 type transporter ATPase subunit [Dietzia cinnamea P4]
Length=272
Score = 414 bits (1064), Expect = 6e-114, Method: Compositional matrix adjust.
Identities = 202/262 (78%), Positives = 228/262 (88%), Gaps = 0/262 (0%)
Query 4 PHHPHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLG 63
P I +A V+FPIFDAKSRSLKKAVLG AGG IGRN SNVVV+EAL+DIT+ L G
Sbjct 8 PGGVSIDCVDACVDFPIFDAKSRSLKKAVLGSAGGAIGRNASNVVVVEALKDITLSLREG 67
Query 64 DRVGLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIR 123
DR+GLVGHNGAGKSTLLRLLSGIYEPTRG A++ GRVAPVFDLG+GMDPEISGYENIIIR
Sbjct 68 DRIGLVGHNGAGKSTLLRLLSGIYEPTRGAARIRGRVAPVFDLGVGMDPEISGYENIIIR 127
Query 124 GLFLGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDE 183
GLFLGQTRKQM+AKVDEIA+FTELG+YL MPLRTYSTGMRVRLAMGVVTSIDPEILLLDE
Sbjct 128 GLFLGQTRKQMKAKVDEIADFTELGDYLDMPLRTYSTGMRVRLAMGVVTSIDPEILLLDE 187
Query 184 GIGAVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEE 243
GIGAVDA+F++KA+ +L +LV RSGILVFASHSNEFLA+LC +A+WIDHG IR G IEE
Sbjct 188 GIGAVDAEFMKKARVKLADLVSRSGILVFASHSNEFLAQLCDSAMWIDHGRIRQRGSIEE 247
Query 244 VVRAYEGEDAARHVREVLAETQ 265
+V AYEG +A R + E + +
Sbjct 248 IVTAYEGPEAGRSIGEYIGRMR 269
>gi|343926178|ref|ZP_08765687.1| putative ABC transporter ATP-binding protein [Gordonia alkanivorans
NBRC 16433]
gi|343763807|dbj|GAA12613.1| putative ABC transporter ATP-binding protein [Gordonia alkanivorans
NBRC 16433]
Length=278
Score = 414 bits (1063), Expect = 1e-113, Method: Compositional matrix adjust.
Identities = 199/261 (77%), Positives = 230/261 (89%), Gaps = 0/261 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
+ T +A V+FPIFDAK+RSLKK+V+G AGG IG N SNVVV+EAL++I + L GDR+GL
Sbjct 14 VDTWDACVDFPIFDAKTRSLKKSVIGAAGGVIGSNASNVVVVEALKNINLHLKHGDRIGL 73
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG +V GRVAPVFDLG+GMDPEISGYENIIIRG+FLG
Sbjct 74 VGHNGAGKSTLLRLLSGIYEPTRGACRVHGRVAPVFDLGVGMDPEISGYENIIIRGMFLG 133
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
TRK+M K+D+IAEFTELG+YL MPLRTYSTGMRVR+A+GVVTSIDPEIL+LDEGIGAV
Sbjct 134 MTRKEMLKKIDDIAEFTELGDYLQMPLRTYSTGMRVRIALGVVTSIDPEILILDEGIGAV 193
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DADF++KA+ RLQ LVERSGILVFASHSNEFLA+LC A+WID G +R+ GGIEEVV AY
Sbjct 194 DADFMKKARGRLQALVERSGILVFASHSNEFLAQLCDRALWIDKGEVRMEGGIEEVVEAY 253
Query 249 EGEDAARHVREVLAETQADRQ 269
EG AA HVR+V+A+ QAD Q
Sbjct 254 EGPGAAAHVRKVIAQVQADSQ 274
>gi|25026733|ref|NP_736787.1| putative O-antigen export system ATP-binding protein [Corynebacterium
efficiens YS-314]
gi|23492012|dbj|BAC16987.1| putative O-antigen export system ATP-binding protein [Corynebacterium
efficiens YS-314]
Length=274
Score = 414 bits (1063), Expect = 1e-113, Method: Compositional matrix adjust.
Identities = 200/264 (76%), Positives = 232/264 (88%), Gaps = 0/264 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I T+NA V+FPIFDAKSRS+KKA LG AGG IGRN NVVV+EAL++I + L GDRVGL
Sbjct 6 IDTYNACVDFPIFDAKSRSMKKAFLGAAGGAIGRNQDNVVVVEALKNINLHLREGDRVGL 65
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A + GRVAPVFDLGIGMDPEISGYENI+IRGLFLG
Sbjct 66 VGHNGAGKSTLLRLLSGIYEPTRGAADIRGRVAPVFDLGIGMDPEISGYENIVIRGLFLG 125
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QTRKQM+AK++EIA+FTELGEYLSMPLRTYSTGMR+RLA+GVVTSI+PEILLLDEGIGAV
Sbjct 126 QTRKQMKAKMEEIADFTELGEYLSMPLRTYSTGMRIRLALGVVTSIEPEILLLDEGIGAV 185
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA F+ KA+ RLQ LVERSGILVFASHSN+FLA+LC TA+W+DHG IR AG + +VV +Y
Sbjct 186 DAAFMAKARDRLQALVERSGILVFASHSNDFLAQLCDTALWVDHGEIRQAGLVPDVVESY 245
Query 249 EGEDAARHVREVLAETQADRQNVQ 272
EG+ AA HVR +L + +++ V+
Sbjct 246 EGKGAADHVRRLLKRMEEEKRGVE 269
>gi|259508132|ref|ZP_05751032.1| O-antigen export system, ATP-binding protein [Corynebacterium
efficiens YS-314]
gi|259164221|gb|EEW48775.1| O-antigen export system, ATP-binding protein [Corynebacterium
efficiens YS-314]
Length=272
Score = 413 bits (1061), Expect = 2e-113, Method: Compositional matrix adjust.
Identities = 200/264 (76%), Positives = 232/264 (88%), Gaps = 0/264 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I T+NA V+FPIFDAKSRS+KKA LG AGG IGRN NVVV+EAL++I + L GDRVGL
Sbjct 4 IDTYNACVDFPIFDAKSRSMKKAFLGAAGGAIGRNQDNVVVVEALKNINLHLREGDRVGL 63
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A + GRVAPVFDLGIGMDPEISGYENI+IRGLFLG
Sbjct 64 VGHNGAGKSTLLRLLSGIYEPTRGAADIRGRVAPVFDLGIGMDPEISGYENIVIRGLFLG 123
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QTRKQM+AK++EIA+FTELGEYLSMPLRTYSTGMR+RLA+GVVTSI+PEILLLDEGIGAV
Sbjct 124 QTRKQMKAKMEEIADFTELGEYLSMPLRTYSTGMRIRLALGVVTSIEPEILLLDEGIGAV 183
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA F+ KA+ RLQ LVERSGILVFASHSN+FLA+LC TA+W+DHG IR AG + +VV +Y
Sbjct 184 DAAFMAKARDRLQALVERSGILVFASHSNDFLAQLCDTALWVDHGEIRQAGLVPDVVESY 243
Query 249 EGEDAARHVREVLAETQADRQNVQ 272
EG+ AA HVR +L + +++ V+
Sbjct 244 EGKGAADHVRRLLKRMEEEKRGVE 267
>gi|326385011|ref|ZP_08206684.1| ABC transporter-like protein [Gordonia neofelifaecis NRRL B-59395]
gi|326196302|gb|EGD53503.1| ABC transporter-like protein [Gordonia neofelifaecis NRRL B-59395]
Length=277
Score = 413 bits (1061), Expect = 2e-113, Method: Compositional matrix adjust.
Identities = 201/265 (76%), Positives = 229/265 (87%), Gaps = 0/265 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
+ T +A V+FPIFDAK+RSLKKAV+G AGG IG N+S VV+EALRDI + L GDRVGL
Sbjct 8 VDTWDACVDFPIFDAKTRSLKKAVIGAAGGVIGANSSKTVVVEALRDINLHLEHGDRVGL 67
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG +V GRVAPVFDLG+GMDPEISGYENIIIRG+FLG
Sbjct 68 VGHNGAGKSTLLRLLSGIYEPTRGSCRVKGRVAPVFDLGVGMDPEISGYENIIIRGMFLG 127
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
+RK+M K DEIAEF+ELG+YL MPLRTYSTGMRVRLA+GVVTSIDPEIL+LDEGIGAV
Sbjct 128 MSRKEMLKKTDEIAEFSELGDYLQMPLRTYSTGMRVRLALGVVTSIDPEILILDEGIGAV 187
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA+F++KA+ RLQ LVERSGILVFASHSNEFLA+LC A+WIDHG IR+ GGIE+VV AY
Sbjct 188 DAEFMKKARVRLQALVERSGILVFASHSNEFLAQLCDRALWIDHGQIRMDGGIEDVVGAY 247
Query 249 EGEDAARHVREVLAETQADRQNVQG 273
EG DAA+HVR+VL E +R G
Sbjct 248 EGPDAAQHVRKVLDELAEERDGTSG 272
>gi|145294324|ref|YP_001137145.1| hypothetical protein cgR_0279 [Corynebacterium glutamicum R]
gi|140844244|dbj|BAF53243.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044005|gb|EGV39687.1| hypothetical protein CgS9114_11886 [Corynebacterium glutamicum
S9114]
Length=263
Score = 411 bits (1056), Expect = 6e-113, Method: Compositional matrix adjust.
Identities = 199/260 (77%), Positives = 228/260 (88%), Gaps = 0/260 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I T+NA V+FPIFDAKSRS+KKA LG AGG IGRN NVVV+EALRDI + L GDRVGL
Sbjct 4 IDTYNACVDFPIFDAKSRSMKKAFLGAAGGAIGRNQDNVVVVEALRDINLHLREGDRVGL 63
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A + GRVAPVFDLG+GMDPEISGYENIIIRGLFLG
Sbjct 64 VGHNGAGKSTLLRLLSGIYEPTRGSADIRGRVAPVFDLGVGMDPEISGYENIIIRGLFLG 123
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QTRKQM+AK++EIA+FTELGEYLSMPLRTYSTGMR+RLA+GVVTSI+PEILLLDEGIGAV
Sbjct 124 QTRKQMKAKMEEIADFTELGEYLSMPLRTYSTGMRIRLALGVVTSIEPEILLLDEGIGAV 183
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA F+ KA+ RLQ LVERSGILVFASHSN+FLA+LC TA+W+DHG IR AG + ++V +Y
Sbjct 184 DAAFMAKARDRLQALVERSGILVFASHSNDFLAQLCNTALWVDHGQIRDAGLVPDIVESY 243
Query 249 EGEDAARHVREVLAETQADR 268
EG+ A HVR +L + ++
Sbjct 244 EGKGAGDHVRRLLTRMEEEK 263
>gi|333917827|ref|YP_004491408.1| O-antigen export system [Amycolicicoccus subflavus DQS3-9A1]
gi|333480048|gb|AEF38608.1| O-antigen export system [Amycolicicoccus subflavus DQS3-9A1]
Length=266
Score = 410 bits (1053), Expect = 2e-112, Method: Compositional matrix adjust.
Identities = 198/264 (75%), Positives = 230/264 (88%), Gaps = 0/264 (0%)
Query 4 PHHPHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLG 63
P I T +A V+FPIFDAK+RSLKKA LGKAGG+IGR NSNVVV+EALRD+TM L G
Sbjct 2 PDEVRIDTAHACVDFPIFDAKTRSLKKAFLGKAGGSIGRTNSNVVVVEALRDVTMSLREG 61
Query 64 DRVGLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIR 123
DRVGLVGHNGAGKSTLLRLL+GIYEPTRG A++ GRVAP+FDLG+GMDPEISGYENIIIR
Sbjct 62 DRVGLVGHNGAGKSTLLRLLAGIYEPTRGKARIQGRVAPIFDLGVGMDPEISGYENIIIR 121
Query 124 GLFLGQTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDE 183
GLFLG TRKQM ++D+IAEFTELG+YL MPLRTYSTGMRVR+AMGVVTSI+PEILLLDE
Sbjct 122 GLFLGMTRKQMMQRMDDIAEFTELGDYLDMPLRTYSTGMRVRVAMGVVTSIEPEILLLDE 181
Query 184 GIGAVDADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEE 243
GIGAVDADF+RKA+ RLQ LV RSGILVFASHS+EFLA+LC TA+WIDHG +R G I++
Sbjct 182 GIGAVDADFMRKARKRLQELVSRSGILVFASHSDEFLAQLCDTAMWIDHGTVRERGMIKD 241
Query 244 VVRAYEGEDAARHVREVLAETQAD 267
V+ Y+G +AA+ V +V A+ A+
Sbjct 242 VLTHYKGPEAAKIVDKVQADMAAE 265
>gi|19551451|ref|NP_599453.1| ABC-type transporter, ATPase component [Corynebacterium glutamicum
ATCC 13032]
gi|62389097|ref|YP_224499.1| polysaccharide/polyol phosphate ABC transporter ATPase [Corynebacterium
glutamicum ATCC 13032]
gi|21322964|dbj|BAB97593.1| ABC-type transporter, ATPase component [Corynebacterium glutamicum
ATCC 13032]
gi|41324430|emb|CAF18770.1| PUTATIVE ABC-TYPE POLYSACCHARIDE/POLYOL PHOSPHATE EXPORT SYTEM,
ATPASE [Corynebacterium glutamicum ATCC 13032]
Length=263
Score = 409 bits (1052), Expect = 2e-112, Method: Compositional matrix adjust.
Identities = 198/260 (77%), Positives = 228/260 (88%), Gaps = 0/260 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I T+NA V+FPIFDAKSRS+KKA LG AGG IGRN NVVV+EAL+++ + L GDRVGL
Sbjct 4 IDTYNACVDFPIFDAKSRSMKKAFLGAAGGAIGRNQDNVVVVEALKNVNLHLREGDRVGL 63
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A + GRVAPVFDLG+GMDPEISGYENIIIRGLFLG
Sbjct 64 VGHNGAGKSTLLRLLSGIYEPTRGSADIRGRVAPVFDLGVGMDPEISGYENIIIRGLFLG 123
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QTRKQM+AK++EIA+FTELGEYLSMPLRTYSTGMR+RLA+GVVTSI+PEILLLDEGIGAV
Sbjct 124 QTRKQMKAKMEEIADFTELGEYLSMPLRTYSTGMRIRLALGVVTSIEPEILLLDEGIGAV 183
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA F+ KA+ RLQ LVERSGILVFASHSN+FLA+LC TA+W+DHG IR AG + +VV AY
Sbjct 184 DAAFMAKARDRLQALVERSGILVFASHSNDFLAQLCNTALWVDHGQIREAGLVPDVVEAY 243
Query 249 EGEDAARHVREVLAETQADR 268
EG+ A HVR +L + ++
Sbjct 244 EGKGAGDHVRRLLTRMEEEK 263
>gi|237786584|ref|YP_002907289.1| ABC transporter ATP-binding protein [Corynebacterium kroppenstedtii
DSM 44385]
gi|237759496|gb|ACR18746.1| ABC-type transport system, ATP-binding protein [Corynebacterium
kroppenstedtii DSM 44385]
Length=288
Score = 409 bits (1051), Expect = 2e-112, Method: Compositional matrix adjust.
Identities = 196/253 (78%), Positives = 226/253 (90%), Gaps = 0/253 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I T+NA V+FPIFDAKSRSLKKA LG AGG IGRN NVVV+EAL+++ + L GDRVGL
Sbjct 4 IDTYNACVDFPIFDAKSRSLKKAFLGAAGGAIGRNADNVVVVEALKNVNLHLQDGDRVGL 63
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A+V GRVAPVFDLG+GMDPEISGYENIIIRGLFLG
Sbjct 64 VGHNGAGKSTLLRLLSGIYEPTRGSAEVRGRVAPVFDLGVGMDPEISGYENIIIRGLFLG 123
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QTRK+MQAK+DEIAEFTELG+YL MPLRTYSTGMRVRLA+GVVTSI+PEILLLDEGIGAV
Sbjct 124 QTRKKMQAKMDEIAEFTELGDYLDMPLRTYSTGMRVRLALGVVTSIEPEILLLDEGIGAV 183
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA F+ KA+ RL+++VERSGILVFASHS+EFLA+LC +A+W+DHG IR AG ++++V Y
Sbjct 184 DAAFMAKARDRLRDMVERSGILVFASHSDEFLAQLCTSALWVDHGEIRQAGQVDDIVEQY 243
Query 249 EGEDAARHVREVL 261
EG +AA VR V+
Sbjct 244 EGPEAAEQVRHVM 256
>gi|225020133|ref|ZP_03709325.1| hypothetical protein CORMATOL_00129 [Corynebacterium matruchotii
ATCC 33806]
gi|305679925|ref|ZP_07402735.1| O-antigen export system ATP-binding protein RfbB family protein
[Corynebacterium matruchotii ATCC 14266]
gi|224947098|gb|EEG28307.1| hypothetical protein CORMATOL_00129 [Corynebacterium matruchotii
ATCC 33806]
gi|305660545|gb|EFM50042.1| O-antigen export system ATP-binding protein RfbB family protein
[Corynebacterium matruchotii ATCC 14266]
Length=272
Score = 407 bits (1045), Expect = 1e-111, Method: Compositional matrix adjust.
Identities = 197/265 (75%), Positives = 229/265 (87%), Gaps = 1/265 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I T+NA V+FPIFDAKSRS+KKA LG AGG IGRN N VV+EALR++ + L GDRVGL
Sbjct 4 IDTYNACVDFPIFDAKSRSMKKAFLGAAGGAIGRNKDNTVVVEALRNVNLHLREGDRVGL 63
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A + GRVAPVFDLG+GMDPEISGYENIIIRGLFLG
Sbjct 64 VGHNGAGKSTLLRLLSGIYEPTRGSAHIHGRVAPVFDLGVGMDPEISGYENIIIRGLFLG 123
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QTRKQM+ K+DEIA+F+ELGEYLSMPLRTYSTGMR+RLA+GVVTSI+PEILLLDEGIGAV
Sbjct 124 QTRKQMKQKMDEIADFSELGEYLSMPLRTYSTGMRIRLALGVVTSIEPEILLLDEGIGAV 183
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA F+ KA++RLQ LV+RSGILVFASHSN+FLA+LC TA+WIDHG +R AG I ++V +Y
Sbjct 184 DAAFMAKARARLQELVKRSGILVFASHSNDFLAQLCDTALWIDHGEVREAGPIPDIVESY 243
Query 249 EGEDAARHVREVLAETQ-ADRQNVQ 272
EG AA HVR ++ + D +N+
Sbjct 244 EGPGAAEHVRRIIEDLHNGDAENMS 268
>gi|337289777|ref|YP_004628798.1| hypothetical protein CULC22_00161 [Corynebacterium ulcerans BR-AD22]
gi|334695906|gb|AEG80703.1| hypothetical protein CULC809_00163 [Corynebacterium ulcerans
809]
gi|334698083|gb|AEG82879.1| hypothetical protein CULC22_00161 [Corynebacterium ulcerans BR-AD22]
Length=265
Score = 406 bits (1043), Expect = 2e-111, Method: Compositional matrix adjust.
Identities = 192/252 (77%), Positives = 223/252 (89%), Gaps = 0/252 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I T+NA V+FPIFDAKSRS+KKA LG AGG IGRN N VV+EALRD+ + L GDR+GL
Sbjct 4 IDTYNACVDFPIFDAKSRSMKKAFLGAAGGAIGRNKDNTVVVEALRDVNLHLKEGDRIGL 63
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A V GRVAPVFDLG+GMDPEISG+ENI+IRGLFLG
Sbjct 64 VGHNGAGKSTLLRLLSGIYEPTRGSAHVRGRVAPVFDLGVGMDPEISGFENIVIRGLFLG 123
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QTRKQM+ K+DEIAEFTELG+YL+MPLRTYSTGMR+RLA+GVVTSI+PEILLLDEGIGAV
Sbjct 124 QTRKQMKQKMDEIAEFTELGDYLAMPLRTYSTGMRIRLALGVVTSIEPEILLLDEGIGAV 183
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA F+ KA+ RL +LV+RSGILVFASHSN+FL +LC +A+WIDHG +R AG +++VV AY
Sbjct 184 DAAFMAKARERLSDLVQRSGILVFASHSNDFLVQLCDSALWIDHGTVRQAGAVDDVVEAY 243
Query 249 EGEDAARHVREV 260
EG+ AA HVR +
Sbjct 244 EGKGAADHVRRL 255
>gi|172041626|ref|YP_001801340.1| putative ABC transport system, ATP-binding protein [Corynebacterium
urealyticum DSM 7109]
gi|171852930|emb|CAQ05906.1| putative ABC transport system, ATP-binding protein [Corynebacterium
urealyticum DSM 7109]
Length=264
Score = 405 bits (1042), Expect = 3e-111, Method: Compositional matrix adjust.
Identities = 198/253 (79%), Positives = 222/253 (88%), Gaps = 0/253 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I T+NA V+FPIFDAK+RSLK LG AGG IGRN SN V++EAL+DI + L GDRVGL
Sbjct 7 IDTYNACVDFPIFDAKTRSLKHTFLGAAGGAIGRNESNTVMVEALKDINLHLQDGDRVGL 66
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A V GRVAPVFDLG+GMDPEISGYENIIIRGLFLG
Sbjct 67 VGHNGAGKSTLLRLLSGIYEPTRGSAVVRGRVAPVFDLGVGMDPEISGYENIIIRGLFLG 126
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QTRK M K+DEIAEFTELG+YL+MPLRTYSTGMR+RLA+GVVTSIDPEILLLDEGIGAV
Sbjct 127 QTRKAMNRKMDEIAEFTELGDYLAMPLRTYSTGMRIRLALGVVTSIDPEILLLDEGIGAV 186
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA F+ KA+SRL +V+RSGILVFASHSNEFLA+LC +A+WIDHG IR AG ++EVV AY
Sbjct 187 DAAFMAKARSRLVEMVKRSGILVFASHSNEFLAQLCDSALWIDHGEIRQAGPVDEVVEAY 246
Query 249 EGEDAARHVREVL 261
EG +A +HVR VL
Sbjct 247 EGPEAGQHVRNVL 259
>gi|38232799|ref|NP_938566.1| ABC transporter ATP-binding protein [Corynebacterium diphtheriae
NCTC 13129]
gi|38199057|emb|CAE48678.1| Putative ABC transport system, ATP-binding protein [Corynebacterium
diphtheriae]
Length=259
Score = 405 bits (1041), Expect = 3e-111, Method: Compositional matrix adjust.
Identities = 192/254 (76%), Positives = 224/254 (89%), Gaps = 0/254 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I T+NA V+FPIFDAKSRS+KKA LG AGG IGRN N VV+EALRD+ + L GDR+GL
Sbjct 4 IDTYNACVDFPIFDAKSRSMKKAFLGAAGGAIGRNKDNTVVVEALRDVNLHLREGDRIGL 63
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A V GRVAPVFDLG+GMDPEISGYENI+IRGLFLG
Sbjct 64 VGHNGAGKSTLLRLLSGIYEPTRGSAHVRGRVAPVFDLGVGMDPEISGYENIVIRGLFLG 123
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QTRKQM+ K+DEIA+FTELG+YLSMPLRTYSTGMR+RLA+GVVTSI+PEILLLDEGIGAV
Sbjct 124 QTRKQMKQKMDEIADFTELGDYLSMPLRTYSTGMRIRLALGVVTSIEPEILLLDEGIGAV 183
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA F+ KA+ RL +LV+RSGILVFASHSN+FL +LC +A+W+DHG IR AG + ++V AY
Sbjct 184 DAAFMAKARERLSDLVKRSGILVFASHSNDFLVQLCDSALWVDHGTIRQAGPVADIVEAY 243
Query 249 EGEDAARHVREVLA 262
EG++AA H+R + A
Sbjct 244 EGKEAADHIRRLQA 257
>gi|300857535|ref|YP_003782518.1| hypothetical protein cpfrc_00118 [Corynebacterium pseudotuberculosis
FRC41]
gi|300684989|gb|ADK27911.1| hypothetical protein cpfrc_00118 [Corynebacterium pseudotuberculosis
FRC41]
gi|302205274|gb|ADL09616.1| O-antigen export system, ATP-binding protein [Corynebacterium
pseudotuberculosis C231]
gi|302329827|gb|ADL20021.1| O-antigen export system, ATP-binding protein [Corynebacterium
pseudotuberculosis 1002]
gi|308275514|gb|ADO25413.1| O-antigen export system, ATP-binding proteinm [Corynebacterium
pseudotuberculosis I19]
gi|341823942|gb|AEK91463.1| O-antigen export system, ATP-binding protein [Corynebacterium
pseudotuberculosis PAT10]
Length=264
Score = 405 bits (1041), Expect = 3e-111, Method: Compositional matrix adjust.
Identities = 191/252 (76%), Positives = 223/252 (89%), Gaps = 0/252 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I T+NA V+FPIFDAKSRS+KKA LG AGG IGRN N VV+EALRD+ + L GDR+GL
Sbjct 4 IDTYNACVDFPIFDAKSRSMKKAFLGAAGGAIGRNKDNTVVVEALRDVNLHLKEGDRIGL 63
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A V GRVAPVFDLG+GMDPEISG+ENI+IRGLFLG
Sbjct 64 VGHNGAGKSTLLRLLSGIYEPTRGSAHVRGRVAPVFDLGVGMDPEISGFENIVIRGLFLG 123
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QTRKQM+ K+DEIAEFTELG+YL+MPLRTYSTGMR+RLA+GVVTSI+PEILLLDEGIGAV
Sbjct 124 QTRKQMKQKMDEIAEFTELGDYLAMPLRTYSTGMRIRLALGVVTSIEPEILLLDEGIGAV 183
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA F+ KA+ RL +LV+RSGILVFASHSN+FL +LC +A+WIDHG +R AG ++++V AY
Sbjct 184 DAAFMAKARERLSDLVQRSGILVFASHSNDFLVQLCDSALWIDHGTVRQAGAVDDIVEAY 243
Query 249 EGEDAARHVREV 260
EG+ AA HVR +
Sbjct 244 EGKGAADHVRRL 255
>gi|336326657|ref|YP_004606623.1| ABC transporter ATP-binding protein [Corynebacterium resistens
DSM 45100]
gi|336102639|gb|AEI10459.1| ABC transport system ATP-binding protein [Corynebacterium resistens
DSM 45100]
Length=262
Score = 405 bits (1040), Expect = 5e-111, Method: Compositional matrix adjust.
Identities = 195/255 (77%), Positives = 222/255 (88%), Gaps = 0/255 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I T+ A V+FPIFDA+SRS+K+ LG AGG IGRNNSN V++EAL+++ + L GDRVGL
Sbjct 4 IDTYGACVDFPIFDARSRSMKQTFLGAAGGAIGRNNSNTVMVEALKNVNLHLEEGDRVGL 63
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A V GRVAPVFDLG+GMDPEISGYENI+IRGLFLG
Sbjct 64 VGHNGAGKSTLLRLLSGIYEPTRGTAVVRGRVAPVFDLGVGMDPEISGYENIVIRGLFLG 123
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QTRK M K+DEIAEF+ELGEYLSMPLRTYSTGMR+RLA+GVVTSIDPEILLLDEGIGAV
Sbjct 124 QTRKSMHRKMDEIAEFSELGEYLSMPLRTYSTGMRIRLALGVVTSIDPEILLLDEGIGAV 183
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA F+ KA+ +L +VERSGILVFASHSNEFLA+LC TA+WIDHG +R AG +++VV AY
Sbjct 184 DAAFMAKARKKLTEMVERSGILVFASHSNEFLAQLCDTALWIDHGEVRQAGRVDDVVEAY 243
Query 249 EGEDAARHVREVLAE 263
EG DA HVR VL E
Sbjct 244 EGPDAGDHVRRVLKE 258
>gi|300780056|ref|ZP_07089912.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Corynebacterium genitalium ATCC 33030]
gi|300534166|gb|EFK55225.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Corynebacterium genitalium ATCC 33030]
Length=272
Score = 403 bits (1036), Expect = 1e-110, Method: Compositional matrix adjust.
Identities = 196/253 (78%), Positives = 225/253 (89%), Gaps = 0/253 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I T+NA V+FPIFDAKSRSLKKAV+ AGG IG+N SN VV+EAL+DI + L GDRVGL
Sbjct 4 IDTYNACVDFPIFDAKSRSLKKAVMSSAGGAIGKNASNTVVVEALKDINLHLREGDRVGL 63
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A V GRVAPVFDLG+GMDPEISGYENIIIRGLFLG
Sbjct 64 VGHNGAGKSTLLRLLSGIYEPTRGVADVRGRVAPVFDLGVGMDPEISGYENIIIRGLFLG 123
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QTRKQM+AK+DEIAEF+ELG+YL+MPLRTYSTGMRVRLA+GVVTSI+PEILLLDEGIGAV
Sbjct 124 QTRKQMKAKMDEIAEFSELGDYLAMPLRTYSTGMRVRLALGVVTSIEPEILLLDEGIGAV 183
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA F+ KA+ RL LV+RSGILVFASHSN+FLA+LC TA+WID G +R AG +++VV AY
Sbjct 184 DAAFMAKARVRLAELVKRSGILVFASHSNDFLAQLCNTALWIDKGEVRQAGLVDDVVEAY 243
Query 249 EGEDAARHVREVL 261
EG++A VR++L
Sbjct 244 EGKEAGDFVRDLL 256
>gi|296141766|ref|YP_003649009.1| ABC transporter [Tsukamurella paurometabola DSM 20162]
gi|296029900|gb|ADG80670.1| ABC transporter related protein [Tsukamurella paurometabola DSM
20162]
Length=264
Score = 402 bits (1034), Expect = 2e-110, Method: Compositional matrix adjust.
Identities = 200/259 (78%), Positives = 226/259 (88%), Gaps = 1/259 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I+T +A V+FP+FDAKSRSLK+AV+G AGG + ++ NVVV+EALR+ITM L+ GDRVGL
Sbjct 5 IRTQDACVDFPVFDAKSRSLKRAVMGSAGGKVMADD-NVVVVEALRNITMNLDEGDRVGL 63
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLL+GIYEPTRG A V GRVAPVFDLG+GMDPEISG ENIIIRGLFLG
Sbjct 64 VGHNGAGKSTLLRLLAGIYEPTRGSAVVKGRVAPVFDLGVGMDPEISGMENIIIRGLFLG 123
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QTRK M K DEIAEFTELG+YLSMPLRTYSTGMRVR+A+GVVTSIDPEILLLDEGIGAV
Sbjct 124 QTRKSMLRKADEIAEFTELGDYLSMPLRTYSTGMRVRIALGVVTSIDPEILLLDEGIGAV 183
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA+F+RKA+ RL LVERSGILVFASHSNEFLA+LC A+WIDHG +R GGIEEVV AY
Sbjct 184 DAEFMRKARKRLAALVERSGILVFASHSNEFLAQLCDRAMWIDHGQVRQEGGIEEVVTAY 243
Query 249 EGEDAARHVREVLAETQAD 267
EG DA VR+VL +A+
Sbjct 244 EGADAGAQVRKVLDMLEAE 262
>gi|227487365|ref|ZP_03917681.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Corynebacterium glucuronolyticum ATCC 51867]
gi|227541117|ref|ZP_03971166.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Corynebacterium glucuronolyticum ATCC 51866]
gi|227092589|gb|EEI27901.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Corynebacterium glucuronolyticum ATCC 51867]
gi|227183077|gb|EEI64049.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Corynebacterium glucuronolyticum ATCC 51866]
Length=261
Score = 402 bits (1032), Expect = 4e-110, Method: Compositional matrix adjust.
Identities = 191/253 (76%), Positives = 225/253 (89%), Gaps = 0/253 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I T+NA V+FPIFDAKSRS+KKA LG AGG IG+ NV+V+EAL+DI + L GDRVGL
Sbjct 4 IDTYNACVDFPIFDAKSRSMKKAFLGAAGGVIGKTADNVIVVEALKDINLHLREGDRVGL 63
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A V GRVAPVFDLG+GMDPEISGYENIIIRGLFLG
Sbjct 64 VGHNGAGKSTLLRLLSGIYEPTRGAADVRGRVAPVFDLGVGMDPEISGYENIIIRGLFLG 123
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
Q+R+QM+ K+DEIAEFTELG+YL+MPLRTYS+GMR+RLA+GVVTSI+PEILLLDEGIGAV
Sbjct 124 QSRRQMKKKMDEIAEFTELGDYLNMPLRTYSSGMRIRLALGVVTSIEPEILLLDEGIGAV 183
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA F+ KA++RL LV+RSGILVFASHSN+FLA+LC TA+W+DHG IR AG + ++V +Y
Sbjct 184 DAAFMAKARARLSELVKRSGILVFASHSNDFLAQLCTTALWVDHGQIRKAGTVPDIVESY 243
Query 249 EGEDAARHVREVL 261
EG++AA HVR +L
Sbjct 244 EGKEAADHVRRLL 256
>gi|262200306|ref|YP_003271514.1| ABC transporter-like protein [Gordonia bronchialis DSM 43247]
gi|262083653|gb|ACY19621.1| ABC transporter related protein [Gordonia bronchialis DSM 43247]
Length=277
Score = 400 bits (1029), Expect = 9e-110, Method: Compositional matrix adjust.
Identities = 194/254 (77%), Positives = 225/254 (89%), Gaps = 0/254 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
+ T +A V+FPIFDAK+RSLKKAV+G AGG IG +SNV+V+EALRDI M L GDRVGL
Sbjct 19 VDTWDACVDFPIFDAKTRSLKKAVVGAAGGVIGATDSNVIVVEALRDINMHLKHGDRVGL 78
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLL+GIYEPTRG +V GRVAPVFDLG+GMDPEISGYENI+IRG+FLG
Sbjct 79 VGHNGAGKSTLLRLLAGIYEPTRGACRVQGRVAPVFDLGVGMDPEISGYENILIRGMFLG 138
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
+RK+M K+D+IAEFTELG++L MPLRTYS GMRVR+A+GVVTSIDPEIL+LDEGIGAV
Sbjct 139 MSRKEMLRKIDDIAEFTELGDHLEMPLRTYSHGMRVRVALGVVTSIDPEILILDEGIGAV 198
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DADF+RKA++RLQ LVERSGILVFASHSNEFLA+LC A+WID G +++ GGIEEVV AY
Sbjct 199 DADFMRKARARLQALVERSGILVFASHSNEFLAQLCDRAMWIDKGQVKMEGGIEEVVGAY 258
Query 249 EGEDAARHVREVLA 262
EG AA HVR+VLA
Sbjct 259 EGPAAAAHVRKVLA 272
>gi|227506058|ref|ZP_03936107.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Corynebacterium striatum ATCC 6940]
gi|227197340|gb|EEI77388.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Corynebacterium striatum ATCC 6940]
Length=268
Score = 400 bits (1027), Expect = 2e-109, Method: Compositional matrix adjust.
Identities = 193/252 (77%), Positives = 221/252 (88%), Gaps = 0/252 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I T+NA V+FPIFDAKSRSLKKAVL AGG IG+N+ N VV+EAL+DI + L GDRVGL
Sbjct 4 IDTYNACVDFPIFDAKSRSLKKAVLSSAGGAIGKNSDNTVVVEALKDINLHLREGDRVGL 63
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A V GRVAPVFDLG+GMDPE+SGY+NIIIRGLFLG
Sbjct 64 VGHNGAGKSTLLRLLSGIYEPTRGSADVRGRVAPVFDLGVGMDPEVSGYDNIIIRGLFLG 123
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QT KQM+ K+DEIAEF+ELG+YL+MPLRTYSTGMRVRLA+GVVTSI+PEILLLDEGIGAV
Sbjct 124 QTIKQMKNKMDEIAEFSELGDYLAMPLRTYSTGMRVRLALGVVTSIEPEILLLDEGIGAV 183
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA F+ KA+ RLQ LV+RSGILVFASHSN+FLA+LC TA+WIDHG IR AG + EVV Y
Sbjct 184 DAVFMAKARVRLQELVKRSGILVFASHSNDFLAQLCNTALWIDHGTIRCAGEVSEVVSEY 243
Query 249 EGEDAARHVREV 260
EG + +V+E+
Sbjct 244 EGPEVGEYVKEL 255
>gi|227549573|ref|ZP_03979622.1| ABC superfamily ATP binding cassette transporter ABC protein
[Corynebacterium lipophiloflavum DSM 44291]
gi|227078337|gb|EEI16300.1| ABC superfamily ATP binding cassette transporter ABC protein
[Corynebacterium lipophiloflavum DSM 44291]
Length=264
Score = 399 bits (1025), Expect = 3e-109, Method: Compositional matrix adjust.
Identities = 194/253 (77%), Positives = 223/253 (89%), Gaps = 0/253 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I T++A V+FPIFDAKSRSLKKAV+ AGG IG+N SN VV+EAL+DI + L GDRVGL
Sbjct 4 IDTYDACVDFPIFDAKSRSLKKAVVSSAGGAIGKNASNTVVVEALKDINLHLREGDRVGL 63
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A V GR+APVFDLG+GMDPEISGYENIIIRGLFLG
Sbjct 64 VGHNGAGKSTLLRLLSGIYEPTRGVADVRGRIAPVFDLGVGMDPEISGYENIIIRGLFLG 123
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QTRKQM+AK+DEIAEF+ELG+YL+MPLRTYSTGMRVRLA+GVVTSIDPEILLLDEGIGAV
Sbjct 124 QTRKQMKAKIDEIAEFSELGDYLNMPLRTYSTGMRVRLALGVVTSIDPEILLLDEGIGAV 183
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA F+ KA+ RL +VERSGILVFASHSN+FLA+LC TA+W+D G IR AG + +VV AY
Sbjct 184 DAAFMAKARVRLAEMVERSGILVFASHSNDFLAQLCTTALWVDKGEIRQAGLVSDVVAAY 243
Query 249 EGEDAARHVREVL 261
EG +A +V E++
Sbjct 244 EGPEAGGYVAELV 256
>gi|227831943|ref|YP_002833650.1| putative ABC transport system, ATP-binding protein [Corynebacterium
aurimucosum ATCC 700975]
gi|262183196|ref|ZP_06042617.1| putative ABC transport system, ATP-binding protein [Corynebacterium
aurimucosum ATCC 700975]
gi|227452959|gb|ACP31712.1| putative ABC transport system, ATP-binding protein [Corynebacterium
aurimucosum ATCC 700975]
Length=265
Score = 398 bits (1023), Expect = 4e-109, Method: Compositional matrix adjust.
Identities = 192/252 (77%), Positives = 225/252 (90%), Gaps = 0/252 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I T+NA V+FPIFDAKSRSLKKA+L AGG+IG+N+ NVV++EAL+DI + L GDRVGL
Sbjct 4 IDTYNACVDFPIFDAKSRSLKKAMLSTAGGSIGKNDQNVVMVEALKDINLHLREGDRVGL 63
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGK+TLLRLLSGIYEPTRG A V GRVAPVFDLG+GMDPE+SGY+NIIIRGLFLG
Sbjct 64 VGHNGAGKTTLLRLLSGIYEPTRGAADVRGRVAPVFDLGVGMDPEVSGYDNIIIRGLFLG 123
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
QT KQM+AK+DEIAEF+ELG+YLSMPLRTYSTGMRVRLA+GVVTSI+PEILLLDEGIGAV
Sbjct 124 QTIKQMKAKMDEIAEFSELGDYLSMPLRTYSTGMRVRLALGVVTSIEPEILLLDEGIGAV 183
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA F+ KA+ RLQ+LV+RSGILVFASHSN+FLA+LC TA+WIDHG IR G + EVV Y
Sbjct 184 DAAFMAKARVRLQDLVKRSGILVFASHSNDFLAQLCDTALWIDHGQIRSVGEVSEVVGEY 243
Query 249 EGEDAARHVREV 260
EG + ++VR++
Sbjct 244 EGPEVGQYVRDL 255
>gi|227502365|ref|ZP_03932414.1| ABC superfamily ATP binding cassette transporter ABC protein
[Corynebacterium accolens ATCC 49725]
gi|306834918|ref|ZP_07467975.1| ABC superfamily ATP binding cassette transporter ABC protein
[Corynebacterium accolens ATCC 49726]
gi|227076919|gb|EEI14882.1| ABC superfamily ATP binding cassette transporter ABC protein
[Corynebacterium accolens ATCC 49725]
gi|304569217|gb|EFM44725.1| ABC superfamily ATP binding cassette transporter ABC protein
[Corynebacterium accolens ATCC 49726]
Length=266
Score = 394 bits (1011), Expect = 1e-107, Method: Compositional matrix adjust.
Identities = 192/252 (77%), Positives = 219/252 (87%), Gaps = 0/252 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I T+NA V+FPIFDAKSRSLKKA+L AGG IG+N N VV+EALRDI + L GDRVGL
Sbjct 4 IDTYNACVDFPIFDAKSRSLKKAMLSTAGGAIGKNAHNTVVVEALRDINLHLREGDRVGL 63
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A V GRVAPVFDLG+GMDPE+SGY+NIIIRGLFLG
Sbjct 64 VGHNGAGKSTLLRLLSGIYEPTRGTADVRGRVAPVFDLGVGMDPEVSGYDNIIIRGLFLG 123
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
Q+ KQM+ K+DEIAEF+ELG+YLSMPLRTYSTGMRVRLA+GVVTSI+PEILLLDEGIGAV
Sbjct 124 QSIKQMKKKMDEIAEFSELGDYLSMPLRTYSTGMRVRLALGVVTSIEPEILLLDEGIGAV 183
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA F+ KA+ RLQ LV+RSGILVFASHSN+FLA+LC TA+WIDHG IR G + EVV Y
Sbjct 184 DAAFMAKARVRLQELVKRSGILVFASHSNDFLAQLCNTALWIDHGEIRSVGEVSEVVGQY 243
Query 249 EGEDAARHVREV 260
EG + +VR++
Sbjct 244 EGPEVGEYVRDL 255
>gi|255325758|ref|ZP_05366852.1| ABC O-antigen transporter, ATP-binding component [Corynebacterium
tuberculostearicum SK141]
gi|311741131|ref|ZP_07714956.1| lipopolysaccharide ABC superfamily ATP binding cassette transporter,
ABC protein [Corynebacterium pseudogenitalium ATCC 33035]
gi|255297169|gb|EET76492.1| ABC O-antigen transporter, ATP-binding component [Corynebacterium
tuberculostearicum SK141]
gi|311303933|gb|EFQ80011.1| lipopolysaccharide ABC superfamily ATP binding cassette transporter,
ABC protein [Corynebacterium pseudogenitalium ATCC 33035]
Length=267
Score = 394 bits (1011), Expect = 1e-107, Method: Compositional matrix adjust.
Identities = 191/252 (76%), Positives = 219/252 (87%), Gaps = 0/252 (0%)
Query 9 IQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVVIEALRDITMELNLGDRVGL 68
I T+NA V+FPIFDAKSRSLKKA+L AGG IG+N N VV+EAL+DI + L GDRVGL
Sbjct 4 IDTYNACVDFPIFDAKSRSLKKAMLSSAGGAIGKNAQNTVVVEALKDINLHLREGDRVGL 63
Query 69 VGHNGAGKSTLLRLLSGIYEPTRGWAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLG 128
VGHNGAGKSTLLRLLSGIYEPTRG A V GRVAPVFDLG+GMDPE+SGY+NIIIRGLFLG
Sbjct 64 VGHNGAGKSTLLRLLSGIYEPTRGSADVRGRVAPVFDLGVGMDPEVSGYDNIIIRGLFLG 123
Query 129 QTRKQMQAKVDEIAEFTELGEYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAV 188
Q+ KQM+ K+DEIAEF+ELG+YLSMPLRTYSTGMRVRLA+GVVTSI+PEILLLDEGIGAV
Sbjct 124 QSIKQMKKKMDEIAEFSELGDYLSMPLRTYSTGMRVRLALGVVTSIEPEILLLDEGIGAV 183
Query 189 DADFLRKAQSRLQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAY 248
DA F+ KA+ RLQ LV+RSGILVFASHSN+FLA+LC TA+WIDHG IR G + EVV Y
Sbjct 184 DAAFMAKARVRLQELVKRSGILVFASHSNDFLAQLCNTALWIDHGEIRSVGEVSEVVGEY 243
Query 249 EGEDAARHVREV 260
EG + +VR++
Sbjct 244 EGPEVGEYVRDL 255
Lambda K H
0.320 0.138 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 426144143792
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40