BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3785

Length=357
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15843407|ref|NP_338444.1|  hypothetical protein MT3893 [Mycoba...   722    0.0   
gi|289556052|ref|ZP_06445262.1|  hypothetical protein TBXG_03802 ...   717    0.0   
gi|15610921|ref|NP_218302.1|  hypothetical protein Rv3785 [Mycoba...   717    0.0   
gi|289445386|ref|ZP_06435130.1|  NAD-dependent epimerase/dehydrat...   713    0.0   
gi|340628755|ref|YP_004747207.1|  hypothetical protein MCAN_38051...   711    0.0   
gi|308380807|ref|ZP_07491141.2|  hypothetical protein TMKG_01030 ...   693    0.0   
gi|254818967|ref|ZP_05223968.1|  hypothetical protein MintA_03526...   451    1e-124
gi|183982370|ref|YP_001850661.1|  hypothetical protein MMAR_2357 ...   395    6e-108
gi|298527259|ref|ZP_07014668.1|  predicted protein [Mycobacterium...   372    4e-101
gi|289747627|ref|ZP_06507005.1|  NAD-dependent epimerase/dehydrat...   372    6e-101
gi|339296591|gb|AEJ48702.1|  hypothetical protein CCDC5079_3513 [...   347    1e-93 
gi|298527260|ref|ZP_07014669.1|  predicted protein [Mycobacterium...   302    7e-80 
gi|339296592|gb|AEJ48703.1|  hypothetical protein CCDC5079_3514 [...   268    7e-70 
gi|302868669|ref|YP_003837306.1|  hypothetical protein Micau_4217...   114    2e-23 
gi|315504859|ref|YP_004083746.1|  hypothetical protein ML5_4085 [...   112    1e-22 
gi|238060038|ref|ZP_04604747.1|  hypothetical protein MCAG_01004 ...   111    2e-22 
gi|330469050|ref|YP_004406793.1|  hypothetical protein VAB18032_2...   110    4e-22 
gi|336178962|ref|YP_004584337.1|  hypothetical protein FsymDg_310...  42.4    0.12  
gi|19113586|ref|NP_596794.1|  ATP-dependent RNA helicase Dbp8 (pr...  40.8    0.31  
gi|213403328|ref|XP_002172436.1|  ATP-dependent RNA helicase dbp8...  37.4    3.4   
gi|256377630|ref|YP_003101290.1|  family 2 glycosyl transferase [...  36.6    7.2   
gi|163738450|ref|ZP_02145865.1|  hypothetical protein RGBS107_105...  36.6    7.3   


>gi|15843407|ref|NP_338444.1| hypothetical protein MT3893 [Mycobacterium tuberculosis CDC1551]
 gi|254233278|ref|ZP_04926604.1| hypothetical protein TBCG_03711 [Mycobacterium tuberculosis C]
 gi|13883774|gb|AAK48258.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium 
tuberculosis CDC1551]
 gi|124603071|gb|EAY61346.1| hypothetical protein TBCG_03711 [Mycobacterium tuberculosis C]
 gi|323717651|gb|EGB26853.1| hypothetical protein TMMG_00278 [Mycobacterium tuberculosis CDC1551A]
Length=712

 Score =  722 bits (1863),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 357/357 (100%), Positives = 357/357 (100%), Gaps = 0/357 (0%)

Query  1    MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS  60
            MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS
Sbjct  356  MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS  415

Query  61   LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL  120
            LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL
Sbjct  416  LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL  475

Query  121  TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV  180
            TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV
Sbjct  476  TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV  535

Query  181  AVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI  240
            AVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI
Sbjct  536  AVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI  595

Query  241  TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFG  300
            TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFG
Sbjct  596  TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFG  655

Query  301  IQVETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR  357
            IQVETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR
Sbjct  656  IQVETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR  712


>gi|289556052|ref|ZP_06445262.1| hypothetical protein TBXG_03802 [Mycobacterium tuberculosis KZN 
605]
 gi|308232567|ref|ZP_07416484.2| hypothetical protein TMAG_00277 [Mycobacterium tuberculosis SUMu001]
 gi|308369231|ref|ZP_07417016.2| hypothetical protein TMBG_02325 [Mycobacterium tuberculosis SUMu002]
 21 more sequence titles
 
gi|308371451|ref|ZP_07425023.2| hypothetical protein TMCG_01291 [Mycobacterium tuberculosis SUMu003]
 gi|308372654|ref|ZP_07429390.2| hypothetical protein TMDG_01523 [Mycobacterium tuberculosis SUMu004]
 gi|308372739|ref|ZP_07429689.2| hypothetical protein TMEG_00282 [Mycobacterium tuberculosis SUMu005]
 gi|308373819|ref|ZP_07433754.2| hypothetical protein TMFG_02019 [Mycobacterium tuberculosis SUMu006]
 gi|308374982|ref|ZP_07442301.2| hypothetical protein TMGG_01330 [Mycobacterium tuberculosis SUMu007]
 gi|308376230|ref|ZP_07438095.2| hypothetical protein TMHG_02854 [Mycobacterium tuberculosis SUMu008]
 gi|308378468|ref|ZP_07482690.2| hypothetical protein TMIG_00138 [Mycobacterium tuberculosis SUMu009]
 gi|308379617|ref|ZP_07486924.2| hypothetical protein TMJG_01039 [Mycobacterium tuberculosis SUMu010]
 gi|308406246|ref|ZP_07495698.2| hypothetical protein TMLG_00277 [Mycobacterium tuberculosis SUMu012]
 gi|289440684|gb|EFD23177.1| hypothetical protein TBXG_03802 [Mycobacterium tuberculosis KZN 
605]
 gi|308213668|gb|EFO73067.1| hypothetical protein TMAG_00277 [Mycobacterium tuberculosis SUMu001]
 gi|308328401|gb|EFP17252.1| hypothetical protein TMBG_02325 [Mycobacterium tuberculosis SUMu002]
 gi|308328805|gb|EFP17656.1| hypothetical protein TMCG_01291 [Mycobacterium tuberculosis SUMu003]
 gi|308332648|gb|EFP21499.1| hypothetical protein TMDG_01523 [Mycobacterium tuberculosis SUMu004]
 gi|308340140|gb|EFP28991.1| hypothetical protein TMEG_00282 [Mycobacterium tuberculosis SUMu005]
 gi|308344126|gb|EFP32977.1| hypothetical protein TMFG_02019 [Mycobacterium tuberculosis SUMu006]
 gi|308347928|gb|EFP36779.1| hypothetical protein TMGG_01330 [Mycobacterium tuberculosis SUMu007]
 gi|308351796|gb|EFP40647.1| hypothetical protein TMHG_02854 [Mycobacterium tuberculosis SUMu008]
 gi|308352579|gb|EFP41430.1| hypothetical protein TMIG_00138 [Mycobacterium tuberculosis SUMu009]
 gi|308356531|gb|EFP45382.1| hypothetical protein TMJG_01039 [Mycobacterium tuberculosis SUMu010]
 gi|308363997|gb|EFP52848.1| hypothetical protein TMLG_00277 [Mycobacterium tuberculosis SUMu012]
Length=374

 Score =  717 bits (1852),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 357/357 (100%), Positives = 357/357 (100%), Gaps = 0/357 (0%)

Query  1    MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS  60
            MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS
Sbjct  18   MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS  77

Query  61   LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL  120
            LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL
Sbjct  78   LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL  137

Query  121  TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV  180
            TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV
Sbjct  138  TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV  197

Query  181  AVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI  240
            AVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI
Sbjct  198  AVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI  257

Query  241  TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFG  300
            TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFG
Sbjct  258  TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFG  317

Query  301  IQVETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR  357
            IQVETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR
Sbjct  318  IQVETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR  374


>gi|15610921|ref|NP_218302.1| hypothetical protein Rv3785 [Mycobacterium tuberculosis H37Rv]
 gi|31794958|ref|NP_857451.1| hypothetical protein Mb3814 [Mycobacterium bovis AF2122/97]
 gi|121639702|ref|YP_979926.1| hypothetical protein BCG_3847 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 37 more sequence titles
 
gi|148663653|ref|YP_001285176.1| hypothetical protein MRA_3825 [Mycobacterium tuberculosis H37Ra]
 gi|148824992|ref|YP_001289746.1| hypothetical protein TBFG_13819 [Mycobacterium tuberculosis F11]
 gi|167970948|ref|ZP_02553225.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium 
tuberculosis H37Ra]
 gi|224992197|ref|YP_002646887.1| hypothetical protein JTY_3849 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253800833|ref|YP_003033835.1| hypothetical protein TBMG_03832 [Mycobacterium tuberculosis KZN 
1435]
 gi|254366332|ref|ZP_04982376.1| hypothetical protein TBHG_03723 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|254552900|ref|ZP_05143347.1| hypothetical protein Mtube_21057 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|289441222|ref|ZP_06430966.1| hypothetical protein TBLG_01965 [Mycobacterium tuberculosis T46]
 gi|289572034|ref|ZP_06452261.1| hypothetical protein TBJG_02922 [Mycobacterium tuberculosis T17]
 gi|289572437|ref|ZP_06452664.1| NAD-dependent epimerase/dehydratase [Mycobacterium tuberculosis 
K85]
 gi|289748308|ref|ZP_06507686.1| hypothetical protein TBDG_00196 [Mycobacterium tuberculosis T92]
 gi|289755918|ref|ZP_06515296.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289763969|ref|ZP_06523347.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|297636467|ref|ZP_06954247.1| hypothetical protein MtubK4_20180 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297733461|ref|ZP_06962579.1| hypothetical protein MtubKR_20320 [Mycobacterium tuberculosis 
KZN R506]
 gi|313660792|ref|ZP_07817672.1| hypothetical protein MtubKV_20315 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339633781|ref|YP_004725423.1| hypothetical protein MAF_38000 [Mycobacterium africanum GM041182]
 gi|54039912|sp|P65094.1|Y3814_MYCBO RecName: Full=Uncharacterized protein Mb3814
 gi|54042580|sp|P65093.1|Y3785_MYCTU RecName: Full=Uncharacterized protein Rv3785/MT3893
 gi|1552868|emb|CAB02464.1| HYPOTHETICAL PROTEIN Rv3785 [Mycobacterium tuberculosis H37Rv]
 gi|31620556|emb|CAD96000.1| HYPOTHETICAL PROTEIN Mb3814 [Mycobacterium bovis AF2122/97]
 gi|121495350|emb|CAL73837.1| Hypothetical protein BCG_3847 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|134151844|gb|EBA43889.1| hypothetical protein TBHG_03723 [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148507805|gb|ABQ75614.1| hypothetical protein MRA_3825 [Mycobacterium tuberculosis H37Ra]
 gi|148723519|gb|ABR08144.1| hypothetical protein TBFG_13819 [Mycobacterium tuberculosis F11]
 gi|224775313|dbj|BAH28119.1| hypothetical protein JTY_3849 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253322337|gb|ACT26940.1| hypothetical protein TBMG_03832 [Mycobacterium tuberculosis KZN 
1435]
 gi|289414141|gb|EFD11381.1| hypothetical protein TBLG_01965 [Mycobacterium tuberculosis T46]
 gi|289536868|gb|EFD41446.1| NAD-dependent epimerase/dehydratase [Mycobacterium tuberculosis 
K85]
 gi|289545788|gb|EFD49436.1| hypothetical protein TBJG_02922 [Mycobacterium tuberculosis T17]
 gi|289688895|gb|EFD56324.1| hypothetical protein TBDG_00196 [Mycobacterium tuberculosis T92]
 gi|289696505|gb|EFD63934.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289711475|gb|EFD75491.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|328460561|gb|AEB05984.1| hypothetical protein TBSG_03855 [Mycobacterium tuberculosis KZN 
4207]
 gi|339333137|emb|CCC28869.1| hypothetical protein MAF_38000 [Mycobacterium africanum GM041182]
 gi|341603723|emb|CCC66404.1| hypothetical protein BCGM_3811 [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344221625|gb|AEN02256.1| hypothetical protein MTCTRI2_3864 [Mycobacterium tuberculosis 
CTRI-2]
Length=357

 Score =  717 bits (1850),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 357/357 (100%), Positives = 357/357 (100%), Gaps = 0/357 (0%)

Query  1    MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS  60
            MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS
Sbjct  1    MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS  60

Query  61   LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL  120
            LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL
Sbjct  61   LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL  120

Query  121  TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV  180
            TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV
Sbjct  121  TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV  180

Query  181  AVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI  240
            AVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI
Sbjct  181  AVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI  240

Query  241  TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFG  300
            TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFG
Sbjct  241  TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFG  300

Query  301  IQVETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR  357
            IQVETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR
Sbjct  301  IQVETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR  357


>gi|289445386|ref|ZP_06435130.1| NAD-dependent epimerase/dehydratase [Mycobacterium tuberculosis 
CPHL_A]
 gi|289418344|gb|EFD15545.1| NAD-dependent epimerase/dehydratase [Mycobacterium tuberculosis 
CPHL_A]
Length=357

 Score =  713 bits (1841),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 356/357 (99%), Positives = 356/357 (99%), Gaps = 0/357 (0%)

Query  1    MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS  60
            MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS
Sbjct  1    MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS  60

Query  61   LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL  120
            LDKFSTAWD RARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL
Sbjct  61   LDKFSTAWDCRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL  120

Query  121  TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV  180
            TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV
Sbjct  121  TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV  180

Query  181  AVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI  240
            AVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI
Sbjct  181  AVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI  240

Query  241  TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFG  300
            TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFG
Sbjct  241  TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFG  300

Query  301  IQVETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR  357
            IQVETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR
Sbjct  301  IQVETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR  357


>gi|340628755|ref|YP_004747207.1| hypothetical protein MCAN_38051 [Mycobacterium canettii CIPT 
140010059]
 gi|340006945|emb|CCC46136.1| hypothetical protein MCAN_38051 [Mycobacterium canettii CIPT 
140010059]
Length=357

 Score =  711 bits (1835),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 354/357 (99%), Positives = 357/357 (100%), Gaps = 0/357 (0%)

Query  1    MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS  60
            MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFP+TDHLEARLAS
Sbjct  1    MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPRTDHLEARLAS  60

Query  61   LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL  120
            LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL
Sbjct  61   LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL  120

Query  121  TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV  180
            TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV
Sbjct  121  TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV  180

Query  181  AVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI  240
            AVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI
Sbjct  181  AVCAPGARTEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPI  240

Query  241  TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFG  300
            TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFG
Sbjct  241  TLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFG  300

Query  301  IQVETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR  357
            I+VETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAG+RMATDPRR
Sbjct  301  IRVETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAGDRMATDPRR  357


>gi|308380807|ref|ZP_07491141.2| hypothetical protein TMKG_01030 [Mycobacterium tuberculosis SUMu011]
 gi|308360479|gb|EFP49330.1| hypothetical protein TMKG_01030 [Mycobacterium tuberculosis SUMu011]
Length=346

 Score =  693 bits (1789),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 345/346 (99%), Positives = 346/346 (100%), Gaps = 0/346 (0%)

Query  12   VTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLASLDKFSTAWDYR  71
            +TLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLASLDKFSTAWDYR
Sbjct  1    MTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLASLDKFSTAWDYR  60

Query  72   ARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGLTLESTPQGTTF  131
            ARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGLTLESTPQGTTF
Sbjct  61   ARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGLTLESTPQGTTF  120

Query  132  DHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAVAVCAPGARTEF  191
            DHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAVAVCAPGARTEF
Sbjct  121  DHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAVAVCAPGARTEF  180

Query  192  ELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPITLLEAPSPEPD  251
            ELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPITLLEAPSPEPD
Sbjct  181  ELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPITLLEAPSPEPD  240

Query  252  SSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFGIQVETVGFGID  311
            SSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFGIQVETVGFGID
Sbjct  241  SSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFGIQVETVGFGID  300

Query  312  RYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR  357
            RYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR
Sbjct  301  RYDGLGELDQQHPAKLLQEVRSTIRAARALLERIEAGERMATDPRR  346


>gi|254818967|ref|ZP_05223968.1| hypothetical protein MintA_03526 [Mycobacterium intracellulare 
ATCC 13950]
Length=346

 Score =  451 bits (1159),  Expect = 1e-124, Method: Compositional matrix adjust.
 Identities = 239/336 (72%), Positives = 276/336 (83%), Gaps = 2/336 (0%)

Query  21   LASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLASLDKFSTAWDYRARARAARAL  80
            L S+R  VDAWSAHDALA+LV MFGG FP+  +L ARLA+LD+FS  WDYR RARA R  
Sbjct  13   LTSLRQEVDAWSAHDALAQLVAMFGGVFPRHANLAARLAALDEFSEVWDYRGRARARRGG  72

Query  81   HGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGLTLESTPQGTTFDHVLVIGTG  140
              + VRCQD+ GGARW+IPRLDLP ++ D I  LAQQLGLT ES     TFD++LVIGTG
Sbjct  73   --QQVRCQDADGGARWMIPRLDLPDRQLDTITTLAQQLGLTDESRRTDATFDYMLVIGTG  130

Query  141  RHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAVAVCAPGARTEFELLAAAARD  200
            R+SN++RARWAR LA   +VGHIVLAAASR+LLPSE DA A CAPGARTEFELLAAAA D
Sbjct  131  RYSNMLRARWARNLAAENRVGHIVLAAASRQLLPSEHDAAASCAPGARTEFELLAAAATD  190

Query  201  AFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPITLLEAPSPEPDSSRATSADT  260
            AFG+D   AVR+ RQR  +PHR  MVWRF+ D+ND+G+PITLLEAPSP+P++ RATSADT
Sbjct  191  AFGVDTREAVRHGRQRVGDPHRGQMVWRFSEDSNDVGLPITLLEAPSPDPNNRRATSADT  250

Query  261  FTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFGIQVETVGFGIDRYDGLGELD  320
            FTFTA +L MQ S+CLLVTGQPFVPYQNFDALRTL LPFGI +ETVGFGIDRY+GL ++D
Sbjct  251  FTFTARSLDMQRSSCLLVTGQPFVPYQNFDALRTLTLPFGIGIETVGFGIDRYEGLHDMD  310

Query  321  QQHPAKLLQEVRSTIRAARALLERIEAGERMATDPR  356
             QHPAKLLQEVRSTIRA R+LLER+EA +  AT  R
Sbjct  311  LQHPAKLLQEVRSTIRAGRSLLERVEAAQLTATRRR  346


>gi|183982370|ref|YP_001850661.1| hypothetical protein MMAR_2357 [Mycobacterium marinum M]
 gi|183175696|gb|ACC40806.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=350

 Score =  395 bits (1015),  Expect = 6e-108, Method: Compositional matrix adjust.
 Identities = 202/331 (62%), Positives = 240/331 (73%), Gaps = 8/331 (2%)

Query  17   GDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLASLDKFSTAWDYRARARA  76
            GD  +A +   V AWS   AL ELV MFGG+ P  D L  RLA LD+FS  WDYR RARA
Sbjct  15   GDDFVAGICQQVQAWSTQPALTELVEMFGGSPPAGD-LPTRLALLDEFSKVWDYRGRARA  73

Query  77   ARA--LHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGLTLESTPQGTTFDHV  134
            +    LH      QD+ G  RWLIPRLDLPA + + I  LA +LGL   +TP+G  FDH+
Sbjct  74   SATGRLH-----SQDAAGAVRWLIPRLDLPATQLEQITALASELGLVTATTPEGADFDHI  128

Query  135  LVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAVAVCAPGARTEFELL  194
            LVIG GR++N +R  +ARE+A GR++G +VLAAASR+LL SE DAVAVCAPGARTEFELL
Sbjct  129  LVIGGGRYTNQLRVGYAREMATGRRIGQVVLAAASRQLLESELDAVAVCAPGARTEFELL  188

Query  195  AAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPITLLEAPSPEPDSSR  254
             AAA+D  GLD      ++RQR DNP RD  VW F  + NDLGVP+ LLE PSP+PD+ R
Sbjct  189  VAAAKDVLGLDTGEVTAHIRQRVDNPQRDRAVWSFPPEGNDLGVPVMLLETPSPDPDNRR  248

Query  255  ATSADTFTFTAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFGIQVETVGFGIDRYD  314
            A SADT+TF A T  M  STCLLVTGQP VPY +F+ LRTLALP  I +E+ GFGIDRY+
Sbjct  249  ANSADTYTFAAQTARMHQSTCLLVTGQPVVPYLHFEGLRTLALPLRIHLESAGFGIDRYN  308

Query  315  GLGELDQQHPAKLLQEVRSTIRAARALLERI  345
             L  LDQQHPAKLLQEVRSTIR+ARAL++R+
Sbjct  309  RLSNLDQQHPAKLLQEVRSTIRSARALMDRV  339


>gi|298527259|ref|ZP_07014668.1| predicted protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298497053|gb|EFI32347.1| predicted protein [Mycobacterium tuberculosis 94_M4241A]
Length=221

 Score =  372 bits (956),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 186/188 (99%), Positives = 186/188 (99%), Gaps = 0/188 (0%)

Query  1    MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS  60
            MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS
Sbjct  18   MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS  77

Query  61   LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL  120
            LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL
Sbjct  78   LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL  137

Query  121  TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV  180
            TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV
Sbjct  138  TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV  197

Query  181  AVCAPGAR  188
            AVCAP  R
Sbjct  198  AVCAPAGR  205


>gi|289747627|ref|ZP_06507005.1| NAD-dependent epimerase/dehydratase [Mycobacterium tuberculosis 
02_1987]
 gi|289759951|ref|ZP_06519329.1| predicted protein [Mycobacterium tuberculosis T85]
 gi|289688155|gb|EFD55643.1| NAD-dependent epimerase/dehydratase [Mycobacterium tuberculosis 
02_1987]
 gi|289715515|gb|EFD79527.1| predicted protein [Mycobacterium tuberculosis T85]
Length=204

 Score =  372 bits (954),  Expect = 6e-101, Method: Compositional matrix adjust.
 Identities = 186/188 (99%), Positives = 186/188 (99%), Gaps = 0/188 (0%)

Query  1    MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS  60
            MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS
Sbjct  1    MVTVARRPVCPVTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLAS  60

Query  61   LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL  120
            LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL
Sbjct  61   LDKFSTAWDYRARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGL  120

Query  121  TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV  180
            TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV
Sbjct  121  TLESTPQGTTFDHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAV  180

Query  181  AVCAPGAR  188
            AVCAP  R
Sbjct  181  AVCAPAGR  188


>gi|339296591|gb|AEJ48702.1| hypothetical protein CCDC5079_3513 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339300190|gb|AEJ52300.1| hypothetical protein CCDC5180_3463 [Mycobacterium tuberculosis 
CCDC5180]
Length=193

 Score =  347 bits (891),  Expect = 1e-93, Method: Compositional matrix adjust.
 Identities = 174/177 (99%), Positives = 175/177 (99%), Gaps = 0/177 (0%)

Query  12   VTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLASLDKFSTAWDYR  71
            +TLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLASLDKFSTAWDYR
Sbjct  1    MTLTPGDPALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLASLDKFSTAWDYR  60

Query  72   ARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGLTLESTPQGTTF  131
            ARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGLTLESTPQGTTF
Sbjct  61   ARARAARALHGEPVRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGLTLESTPQGTTF  120

Query  132  DHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAVAVCAPGAR  188
            DHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAVAVCAP  R
Sbjct  121  DHVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPSEDDAVAVCAPAGR  177


>gi|298527260|ref|ZP_07014669.1| predicted protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298497054|gb|EFI32348.1| predicted protein [Mycobacterium tuberculosis 94_M4241A]
Length=151

 Score =  302 bits (773),  Expect = 7e-80, Method: Compositional matrix adjust.
 Identities = 146/147 (99%), Positives = 147/147 (100%), Gaps = 0/147 (0%)

Query  211  RYVRQRDDNPHRDSMVWRFAADTNDLGVPITLLEAPSPEPDSSRATSADTFTFTAHTLGM  270
            RYVRQRDDNPHRDSMVWRFAADTNDLGVPITLL+APSPEPDSSRATSADTFTFTAHTLGM
Sbjct  5    RYVRQRDDNPHRDSMVWRFAADTNDLGVPITLLQAPSPEPDSSRATSADTFTFTAHTLGM  64

Query  271  QDSTCLLVTGQPFVPYQNFDALRTLALPFGIQVETVGFGIDRYDGLGELDQQHPAKLLQE  330
            QDSTCLLVTGQPFVPYQNFDALRTLALPFGIQVETVGFGIDRYDGLGELDQQHPAKLLQE
Sbjct  65   QDSTCLLVTGQPFVPYQNFDALRTLALPFGIQVETVGFGIDRYDGLGELDQQHPAKLLQE  124

Query  331  VRSTIRAARALLERIEAGERMATDPRR  357
            VRSTIRAARALLERIEAGERMATDPRR
Sbjct  125  VRSTIRAARALLERIEAGERMATDPRR  151


>gi|339296592|gb|AEJ48703.1| hypothetical protein CCDC5079_3514 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339300191|gb|AEJ52301.1| hypothetical protein CCDC5180_3464 [Mycobacterium tuberculosis 
CCDC5180]
Length=132

 Score =  268 bits (686),  Expect = 7e-70, Method: Compositional matrix adjust.
 Identities = 131/132 (99%), Positives = 132/132 (100%), Gaps = 0/132 (0%)

Query  226  VWRFAADTNDLGVPITLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVP  285
            +WRFAADTNDLGVPITLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVP
Sbjct  1    MWRFAADTNDLGVPITLLEAPSPEPDSSRATSADTFTFTAHTLGMQDSTCLLVTGQPFVP  60

Query  286  YQNFDALRTLALPFGIQVETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERI  345
            YQNFDALRTLALPFGIQVETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERI
Sbjct  61   YQNFDALRTLALPFGIQVETVGFGIDRYDGLGELDQQHPAKLLQEVRSTIRAARALLERI  120

Query  346  EAGERMATDPRR  357
            EAGERMATDPRR
Sbjct  121  EAGERMATDPRR  132


>gi|302868669|ref|YP_003837306.1| hypothetical protein Micau_4217 [Micromonospora aurantiaca ATCC 
27029]
 gi|302571528|gb|ADL47730.1| hypothetical protein Micau_4217 [Micromonospora aurantiaca ATCC 
27029]
Length=320

 Score =  114 bits (286),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 112/331 (34%), Positives = 157/331 (48%), Gaps = 39/331 (11%)

Query  28   VDAWSAHDALAELVTMFGGAFPQTDHLEARLASLDKFSTA-WDYR-ARARA-ARALHGEP  84
            V +W     +  LV  FGG +P  D L A LA LD FS   WD+R  R R  AR    EP
Sbjct  19   VRSWVESAPVRRLVAHFGGDWPGGD-LAAVLAGLDAFSAHRWDFRQGRERPDAR----EP  73

Query  85   VRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGLTLESTPQGTTFDHVLVIGTGRHSN  144
                 + G                  ++  A  LGL     P  + + H+LV+G   H+ 
Sbjct  74   AFDPATAG-----------------LVLSAAAALGLVRAVAPARSGYAHLLVLGGLAHAC  116

Query  145  LIRARWARELAK--GRQVGHIVLAAASRRLLPSEDDAV-AVCAPGARTEFELLAAAARDA  201
            L R  +A  LA+      G + +  + R L  +E   + A    G  TE ++L A  R A
Sbjct  117  LRRTAYAARLARTAAEVTGEVAVLGSYRPLSAAESRTLDAAGLSGCDTEVDVLDAGVRLA  176

Query  202  FGLDVHPAVRYVRQRDDNPHR--DSMVWRFAADTNDLGVPITLLEAPSPEPDSSRATSAD  259
            FG+D     R   +  D+PHR   S  +R A        P+ +L APS EPD  RA +AD
Sbjct  177  FGVDEPDDER--GEPADHPHRAWSSRTYRPAGLP-----PVRVLAAPSSEPDRRRAHTAD  229

Query  260  TFTFTAHTLGMQ-DSTCLLVTGQPFVPYQNFDALRTLALPFGIQVETVGFGIDRYDGLGE  318
            T  F A  + ++ D   L+VT   +VP+Q+ DALRTLA+P+G  +ETVG        +  
Sbjct  230  TQRFWAEHVRLRADDPVLMVTAPIYVPFQHCDALRTLAVPYGCGIETVGVDPAARAAVAV  289

Query  319  LDQQ-HPAKLLQEVRSTIRAARALLERIEAG  348
             +    P + LQE+RS +R+ RAL   + AG
Sbjct  290  PEPTLTPGRYLQEIRSALRSMRALHATLTAG  320


>gi|315504859|ref|YP_004083746.1| hypothetical protein ML5_4085 [Micromonospora sp. L5]
 gi|315411478|gb|ADU09595.1| hypothetical protein ML5_4085 [Micromonospora sp. L5]
Length=320

 Score =  112 bits (280),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 111/331 (34%), Positives = 157/331 (48%), Gaps = 39/331 (11%)

Query  28   VDAWSAHDALAELVTMFGGAFPQTDHLEARLASLDKFSTA-WDYR-ARARA-ARALHGEP  84
            V +W     +  LV  FGG +P  D L A LA LD FS   WD+R  R R  AR    EP
Sbjct  19   VRSWVESAPVRRLVAHFGGDWPGGD-LAAVLAGLDAFSARRWDFRQGRERPDAR----EP  73

Query  85   VRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGLTLESTPQGTTFDHVLVIGTGRHSN  144
                 + G                  ++  A  LGL     P  + + H+LV+G   H+ 
Sbjct  74   AFDPATAG-----------------LVLSAAAALGLVRAVAPARSGYAHLLVLGGLAHAC  116

Query  145  LIRARWARELAK--GRQVGHIVLAAASRRLLPSEDDAV-AVCAPGARTEFELLAAAARDA  201
            L R  +A  LA+      G + +  + R L  +E   + A    G  TE ++L A  R A
Sbjct  117  LRRTAYAAVLARTAAEVTGEVAVLGSFRPLSAAESRTLDAAGLSGCATEVDVLDAGVRLA  176

Query  202  FGLDVHPAVRYVRQRDDNPHR--DSMVWRFAADTNDLGVPITLLEAPSPEPDSSRATSAD  259
            FG++     R   +  D+PHR   S  +R A        P+ +L APS EPD  RA +AD
Sbjct  177  FGVNEPDDERG--EPADHPHRAWSSRTYRPAGLP-----PVRVLAAPSSEPDRRRAHTAD  229

Query  260  TFTFTAHTLGMQ-DSTCLLVTGQPFVPYQNFDALRTLALPFGIQVETVGFGIDRYDGLGE  318
            T  F A  + ++ D   L+VT   +VP+Q+ DALRTLA+P+G  +ETVG        +  
Sbjct  230  TQRFWAEHVRLRADDPVLMVTAPIYVPFQHCDALRTLAVPYGCGIETVGVDPAARAAVAV  289

Query  319  LDQQ-HPAKLLQEVRSTIRAARALLERIEAG  348
             +    P + LQE+RS +R+ RAL   + AG
Sbjct  290  PEPTLTPGRYLQEIRSALRSMRALHATLTAG  320


>gi|238060038|ref|ZP_04604747.1| hypothetical protein MCAG_01004 [Micromonospora sp. ATCC 39149]
 gi|237881849|gb|EEP70677.1| hypothetical protein MCAG_01004 [Micromonospora sp. ATCC 39149]
Length=326

 Score =  111 bits (278),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 119/339 (36%), Positives = 157/339 (47%), Gaps = 43/339 (12%)

Query  22   ASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLASLDKFST-AWDYRARARAARAL  80
            A + D V +W     L +LV  FGG  P  D L A LA LD FS   WD+R         
Sbjct  19   ARIVDGVRSWVTSPPLRDLVARFGGDRPP-DDLAAALAWLDDFSARHWDFR---------  68

Query  81   HGEPVRCQDSGGGARWLIPRLDLPA---KKRDAIVGLAQQLGLTLESTPQGTTFDHVLVI  137
                      GG  R   P    PA   +    ++  A  LGL     P    + H++V+
Sbjct  69   ----------GGRER---PEAAEPAFDPRTAGLVLAAASALGLVQPVPPARPAYAHLVVL  115

Query  138  GTGRHSNLIRARWA-RELAKGRQV-GHIVLAAASRRLLPSEDDAVA-VCAPGARTEFELL  194
            G   H+ L R  +A R L  G  V G + +  + R L  +E  A+A     G  TE + L
Sbjct  116  GGLAHACLRRVAFAARLLDSGTTVAGEVAVLGSFRPLSGAERRALADAGVAGGDTEVDAL  175

Query  195  AAAARDAFGLDVHPAVRYVRQRDDNPHRD--SMVWRFAADTNDLGVPITLLEAPSPEPDS  252
             AA R  FG+   PA        D PHR   S  WR A        P+ +L APS EP  
Sbjct  176  DAAVRLTFGV-AEPAEEDGVDVGD-PHRSWSSRTWRPAGLP-----PVRVLAAPSSEPGR  228

Query  253  SRATSADTFTFTAHTLGMQ-DSTCLLVTGQPFVPYQNFDALRTLALPFGIQVETVGFGID  311
             RA +ADT  F A  + ++     L+VT   +VP+Q+ DALRTLA+P+G  +ETVG    
Sbjct  229  RRAHTADTQRFWAERVRLRVGDPVLMVTAPIYVPFQHCDALRTLAVPYGCGIETVGVDPT  288

Query  312  RYDGLGELDQQ--HPAKLLQEVRSTIRAARALLERIEAG  348
              D L  L +    P + LQE+RS IR+ RAL   + AG
Sbjct  289  LPD-LTRLPEPALTPGRYLQEIRSAIRSMRALYAAVAAG  326


>gi|330469050|ref|YP_004406793.1| hypothetical protein VAB18032_25475 [Verrucosispora maris AB-18-032]
 gi|328812021|gb|AEB46193.1| hypothetical protein VAB18032_25475 [Verrucosispora maris AB-18-032]
Length=349

 Score =  110 bits (275),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 116/329 (36%), Positives = 151/329 (46%), Gaps = 45/329 (13%)

Query  26   DLVDAWSAHDALAELVTMFGGAFPQTDHLEARLASLDKFST-AWDYRARARAARALHGEP  84
            D +  W     L  LV  FGG +P  D L A LA LD FS   WD+RA      A     
Sbjct  19   DGIAGWVGSAPLRGLVAHFGGRWPHGD-LGAVLAGLDAFSARCWDFRAGRERPEARE---  74

Query  85   VRCQDSGGGARWLIPRLDLPAKKRDAIVGLAQQLGLTLESTPQGTTFDHVLVIGTGRHSN  144
                          P LD PA   + +   A  LGL     P  + + H++V+G   H+ 
Sbjct  75   --------------PNLD-PATV-ELVYRCADALGLVRARPPARSRYAHLVVLGGLAHAC  118

Query  145  LIRARWARELAK-GRQV-GHIVLAAASRRLLPSEDDAVA-VCAPGARTEFELLAAAARDA  201
            L R  +A  L + G  V G + +  + R+L   E   +A V   G  TE + L AA R  
Sbjct  119  LRRVAYAGHLLRTGMDVAGEVAVLGSFRQLSEVERRTLAEVGVTGCDTEVDALDAAVRRT  178

Query  202  FGLDVHPAVRYVRQRD----DNPHRD--SMVWRFAADTNDLGVPITLLEAPSPEPDSSRA  255
            F      AV      D    D+PH    S  +R A        P+ +L APS EP+  RA
Sbjct  179  F------AVSEPETEDGLDADHPHHSWSSRTYRPAGQP-----PVRVLAAPSSEPERRRA  227

Query  256  TSADTFTFTA-HTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFGIQVETVGFGIDRYD  314
             +ADT  F A H    +    LLVT   +VP+Q+ DALRTLALP+  +VETVG      D
Sbjct  228  HTADTQRFWAEHAQLARADEVLLVTAPIYVPFQHCDALRTLALPYACEVETVGVDPMLPD  287

Query  315  GLGELDQQ--HPAKLLQEVRSTIRAARAL  341
             L  L +    P + LQE+RS IR+ RAL
Sbjct  288  -LNRLPEPTLTPGRYLQEIRSAIRSLRAL  315


>gi|336178962|ref|YP_004584337.1| hypothetical protein FsymDg_3107 [Frankia symbiont of Datisca 
glomerata]
 gi|334859942|gb|AEH10416.1| hypothetical protein FsymDg_3107 [Frankia symbiont of Datisca 
glomerata]
Length=343

 Score = 42.4 bits (98),  Expect = 0.12, Method: Compositional matrix adjust.
 Identities = 85/332 (26%), Positives = 131/332 (40%), Gaps = 34/332 (10%)

Query  30   AWSAHDALAELVTMFGGAFPQTDHLEARLASLDKFSTAWDYRARARAARALHGEPVRCQD  89
            AW + + +  L    G  +  +      L  L +    WD+R R R   A+  +     D
Sbjct  33   AWLSGEPVQALAKASGWGWAGSADPRRLLGELCQRCADWDFR-RNRERGAIESDAAVVGD  91

Query  90   SGGGARWLIPRLDLPAKKRDAIVGLAQQLGLTLESTPQGTTFDHVLVIGTGRHSNLIRAR  149
                   LIP         +  V  A+ LG+   + P       ++V+     +N+ R  
Sbjct  92   R------LIPE--------ELAVAAARALGMVDATEPPLADASRLVVLAGAVRANVNRLH  137

Query  150  WARELAKGR-QVGHIVLAAASRRLLPSEDDAVAVCA------PGAR--TEFELLAAAARD  200
             AR   +G  + G +V+  A+R L  +E              PG R  TE + + AAAR 
Sbjct  138  RARSFQRGEPRPGEVVVTTAARDLSAAERSQADTLGLTEWLLPGRRMTTEADAVVAAARA  197

Query  201  AFGLDVHPAVR-YVRQRDDNPHRDSMVW-RFAADTNDLGVPITLLEAPSPEPDSSRATSA  258
             + L   P +   +    D   R +  W R+          +T++ APS +PD+ RA + 
Sbjct  198  TWELRGLPEIDGRLPDGGDGEERTAAAWLRWPGGAVAD---VTVVVAPSADPDARRANTF  254

Query  259  DTFTF--TAHTLGMQDSTCLLVTGQPFVPYQNFDALRTLALPFGIQVETVGFGIDRYDGL  316
            D  T+  T   L  +D   + VT Q +VPYQ   A+R L  P    V     G+D     
Sbjct  255  DQLTYWRTRSPLTPRDH-VVAVTTQIYVPYQQLVAIRALGRPARCGVTVA--GVDAAASA  311

Query  317  GELDQQHPAKLLQEVRSTIRAARALLERIEAG  348
                       LQE+RS   AA  L   ++AG
Sbjct  312  TPTKAFGSRDYLQEIRSFFLAAADLRRDVDAG  343


>gi|19113586|ref|NP_596794.1| ATP-dependent RNA helicase Dbp8 (predicted) [Schizosaccharomyces 
pombe 972h-]
 gi|74654494|sp|Q9HGM5.1|DBP8_SCHPO RecName: Full=ATP-dependent RNA helicase dbp8
 gi|9929273|emb|CAC05248.1| ATP-dependent RNA helicase Dbp8 (predicted) [Schizosaccharomyces 
pombe]
Length=453

 Score = 40.8 bits (94),  Expect = 0.31, Method: Compositional matrix adjust.
 Identities = 31/117 (27%), Positives = 56/117 (48%), Gaps = 13/117 (11%)

Query  133  HVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPS----EDDAVAVCAPGAR  188
            HV+V   GR ++LIR+     +A  R++  +V+  A R L P+     DD  +V      
Sbjct  127  HVVVATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLDDCFSVLPASED  186

Query  189  TEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPITLLEA  245
             +  L  A   DA        ++Y  Q+++ P     +W +  +T+++ VP TL ++
Sbjct  187  RQTLLFTATVTDAI-----RQLKYQPQKNNKPP----LWLYEVETDNISVPSTLQQS  234


>gi|213403328|ref|XP_002172436.1| ATP-dependent RNA helicase dbp8 [Schizosaccharomyces japonicus 
yFS275]
 gi|212000483|gb|EEB06143.1| ATP-dependent RNA helicase dbp8 [Schizosaccharomyces japonicus 
yFS275]
Length=456

 Score = 37.4 bits (85),  Expect = 3.4, Method: Compositional matrix adjust.
 Identities = 29/114 (26%), Positives = 51/114 (45%), Gaps = 13/114 (11%)

Query  133  HVLVIGTGRHSNLIRARWARELAKGRQVGHIVLAAASRRLLPS----EDDAVAVCAPGAR  188
            H++V   GR ++LIR+      A   +   +V   A R L P+     DD + V  P  +
Sbjct  127  HIVVATPGRLADLIRSNGEETYASLHRTQFVVFDEADRLLSPTFADDLDDCLEVLPPPEK  186

Query  189  TEFELLAAAARDAFGLDVHPAVRYVRQRDDNPHRDSMVWRFAADTNDLGVPITL  242
             +  L  A   D        A+R ++ R+ +P +  + W +  DT  + +P +L
Sbjct  187  RQTLLFTATMTD--------AIRALKDREPHPGKPPL-WLYEVDTEGVSIPESL  231


>gi|256377630|ref|YP_003101290.1| family 2 glycosyl transferase [Actinosynnema mirum DSM 43827]
 gi|255921933|gb|ACU37444.1| glycosyl transferase family 2 [Actinosynnema mirum DSM 43827]
Length=619

 Score = 36.6 bits (83),  Expect = 7.2, Method: Compositional matrix adjust.
 Identities = 21/44 (48%), Positives = 29/44 (66%), Gaps = 5/44 (11%)

Query  127  QGTTFDHV----LVIGTGRHSNLIRARWARELAKGRQVGHIVLA  166
            +GTTF+HV    L +   RH+ ++RARWARE A+G + G   LA
Sbjct  227  EGTTFNHVGHDKLAVWK-RHTRVLRARWAREFAEGPRHGPAELA  269


>gi|163738450|ref|ZP_02145865.1| hypothetical protein RGBS107_10516 [Phaeobacter gallaeciensis 
BS107]
 gi|161388371|gb|EDQ12725.1| hypothetical protein RGBS107_10516 [Phaeobacter gallaeciensis 
BS107]
Length=116

 Score = 36.6 bits (83),  Expect = 7.3, Method: Compositional matrix adjust.
 Identities = 27/83 (33%), Positives = 39/83 (47%), Gaps = 6/83 (7%)

Query  19   PALASVRDLVDAWSAHDALAELVTMFGGAFPQTDHLEARLASLDKFSTAWDYRARARAAR  78
            PAL+++ D  DA S  DAL +L  +FG   P T  ++  L  ++ F      +A   AAR
Sbjct  29   PALSNLFDAFDAPSGFDALCDLHGIFGNQQPDTKMIKTALQEIETFLAKQTSQAADAAAR  88

Query  79   ALHGEPVRCQDSGGGARWLIPRL  101
                   R  D+ G  RW   R+
Sbjct  89   N------RGFDASGALRWHGARI  105



Lambda     K      H
   0.321    0.135    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 670036296356


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40