BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3798

Length=444
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|308231806|ref|ZP_07413824.2|  transposase [Mycobacterium tuber...   893    0.0   
gi|15608453|ref|NP_215829.1|  transposase [Mycobacterium tubercul...   891    0.0   
gi|15840764|ref|NP_335801.1|  IS1557 transposase [Mycobacterium t...   888    0.0   
gi|340625317|ref|YP_004743769.1|  transposase for insertion seque...   887    0.0   
gi|308373145|ref|ZP_07431192.2|  transposase [Mycobacterium tuber...   877    0.0   
gi|298524817|ref|ZP_07012226.1|  transposase [Mycobacterium tuber...   871    0.0   
gi|323720046|gb|EGB29154.1|  transposase [Mycobacterium tuberculo...   863    0.0   
gi|289759965|ref|ZP_06519343.1|  transposase [Mycobacterium tuber...   856    0.0   
gi|328460574|gb|AEB05997.1|  transposase [Mycobacterium tuberculo...   770    0.0   
gi|340627435|ref|YP_004745887.1|  transposase [Mycobacterium cane...   739    0.0   
gi|308374204|ref|ZP_07435198.2|  transposase [Mycobacterium tuber...   729    0.0   
gi|262200571|ref|YP_003271779.1|  transposase IS204/IS1001/IS1096...   565    5e-159
gi|317123719|ref|YP_004097831.1|  transposase IS204/IS1001/IS1096...   565    8e-159
gi|262200056|ref|YP_003271264.1|  transposase IS204/IS1001/IS1096...   561    6e-158
gi|239916613|ref|YP_002956171.1|  transposase [Micrococcus luteus...   557    1e-156
gi|27531092|dbj|BAC54155.1|  transposase [Terrabacter sp. DBF63] ...   551    8e-155
gi|308179087|ref|YP_003918493.1|  transposase of ISAar34, ISL3 fa...   539    3e-151
gi|289753390|ref|ZP_06512768.1|  LOW QUALITY PROTEIN: transposase...   500    2e-139
gi|239917926|ref|YP_002957484.1|  transposase [Micrococcus luteus...   500    2e-139
gi|289755931|ref|ZP_06515309.1|  LOW QUALITY PROTEIN: transposase...   498    8e-139
gi|289446908|ref|ZP_06436652.1|  LOW QUALITY PROTEIN: transposase...   496    2e-138
gi|31792506|ref|NP_854999.1|  hypothetical protein Mb1345c [Mycob...   489    5e-136
gi|289441235|ref|ZP_06430979.1|  LOW QUALITY PROTEIN: transposase...   474    1e-131
gi|256397640|ref|YP_003119204.1|  transposase IS204/IS1001/IS1096...   461    1e-127
gi|258654218|ref|YP_003203374.1|  transposase IS204/IS1001/IS1096...   439    4e-121
gi|258651670|ref|YP_003200826.1|  transposase IS204/IS1001/IS1096...   433    3e-119
gi|258655481|ref|YP_003204637.1|  transposase IS204/IS1001/IS1096...   428    9e-118
gi|119716001|ref|YP_922966.1|  transposase, IS204/IS1001/IS1096/I...   404    2e-110
gi|289761468|ref|ZP_06520846.1|  transposase [Mycobacterium tuber...   399    5e-109
gi|31792507|ref|NP_855000.1|  hypothetical protein Mb1346c [Mycob...   391    2e-106
gi|289569325|ref|ZP_06449552.1|  transposase [Mycobacterium tuber...   388    1e-105
gi|111019752|ref|YP_702724.1|  transposase [Rhodococcus jostii RH...   345    8e-93 
gi|323717464|gb|EGB26667.1|  transposase [Mycobacterium tuberculo...   319    6e-85 
gi|323720270|gb|EGB29369.1|  transposase [Mycobacterium tuberculo...   316    4e-84 
gi|308406252|ref|ZP_07495711.2|  hypothetical protein TMLG_00291 ...   315    9e-84 
gi|308379624|ref|ZP_07486938.2|  hypothetical protein TMJG_01053 ...   306    5e-81 
gi|308373828|ref|ZP_07433768.2|  hypothetical protein TMFG_02033 ...   300    4e-79 
gi|308380042|ref|ZP_07488479.2|  hypothetical protein TMKG_01813 ...   297    3e-78 
gi|262200390|ref|YP_003271598.1|  transposase IS204/IS1001/IS1096...   292    8e-77 
gi|294995288|ref|ZP_06800979.1|  transposase [Mycobacterium tuber...   292    9e-77 
gi|84495582|ref|ZP_00994701.1|  IS1557, transposase [Janibacter s...   288    1e-75 
gi|308378902|ref|ZP_07484255.2|  hypothetical protein TMJG_03956 ...   287    2e-75 
gi|134098201|ref|YP_001103862.1|  IS1557, transposase [Saccharopo...   284    2e-74 
gi|291004378|ref|ZP_06562351.1|  IS1557, transposase [Saccharopol...   284    3e-74 
gi|33867237|ref|NP_898795.1|  putative transposase [Rhodococcus e...   266    5e-69 
gi|308373106|ref|ZP_07431030.2|  hypothetical protein TMEG_01210 ...   263    6e-68 
gi|308372662|ref|ZP_07429403.2|  hypothetical protein TMDG_01536 ...   248    2e-63 
gi|308380043|ref|ZP_07488480.2|  hypothetical protein TMKG_01814 ...   246    7e-63 
gi|323720192|gb|EGB29292.1|  transposase [Mycobacterium tuberculo...   244    2e-62 
gi|167969641|ref|ZP_02551918.1|  transposase [Mycobacterium tuber...   240    3e-61 


>gi|308231806|ref|ZP_07413824.2| transposase [Mycobacterium tuberculosis SUMu001]
 gi|308216013|gb|EFO75412.1| transposase [Mycobacterium tuberculosis SUMu001]
Length=458

 Score =  893 bits (2307),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 444/444 (100%), Positives = 444/444 (100%), Gaps = 0/444 (0%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD
Sbjct  15   VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  74

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA
Sbjct  75   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  134

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
            VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV
Sbjct  135  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  194

Query  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240
            VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC
Sbjct  195  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  254

Query  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300
            ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR
Sbjct  255  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  314

Query  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360
            YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA
Sbjct  315  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  374

Query  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420
            QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA
Sbjct  375  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  434

Query  421  LAMLTLAGHRPTLPGRHNHPQISQ  444
            LAMLTLAGHRPTLPGRHNHPQISQ
Sbjct  435  LAMLTLAGHRPTLPGRHNHPQISQ  458


>gi|15608453|ref|NP_215829.1| transposase [Mycobacterium tuberculosis H37Rv]
 gi|15610934|ref|NP_218315.1| transposase [Mycobacterium tuberculosis H37Rv]
 gi|15843420|ref|NP_338457.1| IS1557 transposase [Mycobacterium tuberculosis CDC1551]
 47 more sequence titles
 Length=444

 Score =  891 bits (2302),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 443/444 (99%), Positives = 444/444 (100%), Gaps = 0/444 (0%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD
Sbjct  1    MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA
Sbjct  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
            VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV
Sbjct  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180

Query  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240
            VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC
Sbjct  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240

Query  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300
            ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR
Sbjct  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300

Query  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360
            YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA
Sbjct  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360

Query  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420
            QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA
Sbjct  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420

Query  421  LAMLTLAGHRPTLPGRHNHPQISQ  444
            LAMLTLAGHRPTLPGRHNHPQISQ
Sbjct  421  LAMLTLAGHRPTLPGRHNHPQISQ  444


>gi|15840764|ref|NP_335801.1| IS1557 transposase [Mycobacterium tuberculosis CDC1551]
 gi|148822531|ref|YP_001287285.1| transposase [Mycobacterium tuberculosis F11]
 gi|254364210|ref|ZP_04980256.1| transposase [Mycobacterium tuberculosis str. Haarlem]
 22 more sequence titles
 Length=444

 Score =  888 bits (2294),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 442/444 (99%), Positives = 443/444 (99%), Gaps = 0/444 (0%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD
Sbjct  1    MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA
Sbjct  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
            VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV
Sbjct  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180

Query  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240
            VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC
Sbjct  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240

Query  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300
            ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR
Sbjct  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300

Query  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360
            YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA
Sbjct  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360

Query  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420
            QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA
Sbjct  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420

Query  421  LAMLTLAGHRPTLPGRHNHPQISQ  444
            LAMLTLAGHRPT PGRHNHPQISQ
Sbjct  421  LAMLTLAGHRPTRPGRHNHPQISQ  444


>gi|340625317|ref|YP_004743769.1| transposase for insertion sequence element IS1557 [Mycobacterium 
canettii CIPT 140010059]
 gi|340626091|ref|YP_004744543.1| transposase for insertion sequence element IS1557 [Mycobacterium 
canettii CIPT 140010059]
 gi|340626582|ref|YP_004745034.1| transposase for insertion sequence element is1557 [Mycobacterium 
canettii CIPT 140010059]
 9 more sequence titles
 Length=444

 Score =  887 bits (2293),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 441/444 (99%), Positives = 442/444 (99%), Gaps = 0/444 (0%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD
Sbjct  1    MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA
Sbjct  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
            VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV
Sbjct  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180

Query  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240
            VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC
Sbjct  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240

Query  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300
            ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR
Sbjct  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300

Query  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360
            YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKE LRHVFSVKGEEGKQALDRWISWA
Sbjct  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKEGLRHVFSVKGEEGKQALDRWISWA  360

Query  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420
            QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA
Sbjct  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420

Query  421  LAMLTLAGHRPTLPGRHNHPQISQ  444
            LAML LAGHRPTLPGRHNHPQISQ
Sbjct  421  LAMLALAGHRPTLPGRHNHPQISQ  444


>gi|308373145|ref|ZP_07431192.2| transposase [Mycobacterium tuberculosis SUMu005]
 gi|308338670|gb|EFP27521.1| transposase [Mycobacterium tuberculosis SUMu005]
Length=439

 Score =  877 bits (2267),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 437/439 (99%), Positives = 438/439 (99%), Gaps = 0/439 (0%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD
Sbjct  1    MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA
Sbjct  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
            VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV
Sbjct  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180

Query  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240
            VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC
Sbjct  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240

Query  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300
            ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR
Sbjct  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300

Query  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360
            YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA
Sbjct  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360

Query  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420
            QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA
Sbjct  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420

Query  421  LAMLTLAGHRPTLPGRHNH  439
            LAMLTLAGHRPT PGRHNH
Sbjct  421  LAMLTLAGHRPTRPGRHNH  439


>gi|298524817|ref|ZP_07012226.1| transposase [Mycobacterium tuberculosis 94_M4241A]
 gi|298494611|gb|EFI29905.1| transposase [Mycobacterium tuberculosis 94_M4241A]
Length=444

 Score =  871 bits (2250),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 435/444 (98%), Positives = 436/444 (99%), Gaps = 0/444 (0%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD
Sbjct  1    MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA
Sbjct  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
            VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV
Sbjct  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180

Query  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240
            VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC
Sbjct  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240

Query  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300
            ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR
Sbjct  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300

Query  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360
            YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA
Sbjct  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360

Query  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420
            QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIES        TRIAFGFRSPQALIA
Sbjct  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESGEEVAGEETRIAFGFRSPQALIA  420

Query  421  LAMLTLAGHRPTLPGRHNHPQISQ  444
            LAMLTLAGHRPTLPGRHNHPQISQ
Sbjct  421  LAMLTLAGHRPTLPGRHNHPQISQ  444


>gi|323720046|gb|EGB29154.1| transposase [Mycobacterium tuberculosis CDC1551A]
Length=432

 Score =  863 bits (2231),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 431/432 (99%), Positives = 432/432 (100%), Gaps = 0/432 (0%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD
Sbjct  1    MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA
Sbjct  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
            VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV
Sbjct  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180

Query  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240
            VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC
Sbjct  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240

Query  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300
            ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR
Sbjct  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300

Query  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360
            YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA
Sbjct  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360

Query  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420
            QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA
Sbjct  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420

Query  421  LAMLTLAGHRPT  432
            LAMLTLAGHRPT
Sbjct  421  LAMLTLAGHRPT  432


>gi|289759965|ref|ZP_06519343.1| transposase [Mycobacterium tuberculosis T85]
 gi|289715529|gb|EFD79541.1| transposase [Mycobacterium tuberculosis T85]
Length=427

 Score =  856 bits (2212),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 425/427 (99%), Positives = 426/427 (99%), Gaps = 0/427 (0%)

Query  18   VIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYDRGAGLRQWRSLDWGTVE  77
            +IEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYDRGAGLRQWRSLDWGTVE
Sbjct  1    MIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYDRGAGLRQWRSLDWGTVE  60

Query  78   VFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWR  137
            VFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWR
Sbjct  61   VFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWR  120

Query  138  TVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDK  197
            TVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDK
Sbjct  121  TVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDK  180

Query  198  ATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVE  257
            ATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVE
Sbjct  181  ATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVE  240

Query  258  RRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAK  317
            RRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAK
Sbjct  241  RRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAK  300

Query  318  LAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKR  377
            LAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKR
Sbjct  301  LAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKR  360

Query  378  HRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRH  437
            HRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPT PGRH
Sbjct  361  HRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTRPGRH  420

Query  438  NHPQISQ  444
            NHPQISQ
Sbjct  421  NHPQISQ  427


>gi|328460574|gb|AEB05997.1| transposase [Mycobacterium tuberculosis KZN 4207]
Length=402

 Score =  770 bits (1988),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 381/381 (100%), Positives = 381/381 (100%), Gaps = 0/381 (0%)

Query  64   GLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVAC  123
            GLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVAC
Sbjct  22   GLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVAC  81

Query  124  SKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDH  183
            SKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDH
Sbjct  82   SKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDH  141

Query  184  DSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADP  243
            DSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADP
Sbjct  142  DSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADP  201

Query  244  FHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYAL  303
            FHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYAL
Sbjct  202  FHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYAL  261

Query  304  WKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRC  363
            WKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRC
Sbjct  262  WKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRC  321

Query  364  RIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAM  423
            RIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAM
Sbjct  322  RIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAM  381

Query  424  LTLAGHRPTLPGRHNHPQISQ  444
            LTLAGHRPTLPGRHNHPQISQ
Sbjct  382  LTLAGHRPTLPGRHNHPQISQ  402


>gi|340627435|ref|YP_004745887.1| transposase [Mycobacterium canettii CIPT 140010059]
 gi|340005625|emb|CCC44789.1| transposase [Mycobacterium canettii CIPT 140010059]
Length=437

 Score =  739 bits (1907),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 380/439 (87%), Positives = 391/439 (90%), Gaps = 4/439 (0%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD
Sbjct  1    MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA
Sbjct  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
            VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV
Sbjct  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180

Query  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240
            VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC
Sbjct  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240

Query  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300
            ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR
Sbjct  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300

Query  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360
            YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKE LRHVFSVKGEEGKQALDRWISWA
Sbjct  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKEGLRHVFSVKGEEGKQALDRWISWA  360

Query  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420
            QRCRIPVF     R+ R R  +   L   L   L  +T +  R   R  +G   P  ++ 
Sbjct  361  QRCRIPVFRAGPHRLDRPRRFVGGGLL--LVMPLAVATGSDGR--PRQGYGGSHPGDVVG  416

Query  421  LAMLTLAGHRPTLPGRHNH  439
                  +    + PG  +H
Sbjct  417  CCRTRSSRRALSWPGCRSH  435


>gi|308374204|ref|ZP_07435198.2| transposase [Mycobacterium tuberculosis SUMu006]
 gi|308342713|gb|EFP31564.1| transposase [Mycobacterium tuberculosis SUMu006]
Length=363

 Score =  729 bits (1881),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 361/363 (99%), Positives = 362/363 (99%), Gaps = 0/363 (0%)

Query  80   LEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWRTV  139
            +EAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWRTV
Sbjct  1    MEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWRTV  60

Query  140  GAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDKAT  199
            GAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDKAT
Sbjct  61   GAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDKAT  120

Query  200  LGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVERR  259
            LGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVERR
Sbjct  121  LGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVERR  180

Query  260  RAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLA  319
            RAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLA
Sbjct  181  RAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLA  240

Query  320  WIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHR  379
            WIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHR
Sbjct  241  WIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHR  300

Query  380  VAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNH  439
            VAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPT PGRHNH
Sbjct  301  VAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTRPGRHNH  360

Query  440  PQI  442
            PQI
Sbjct  361  PQI  363


>gi|262200571|ref|YP_003271779.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia 
bronchialis DSM 43247]
 gi|262202683|ref|YP_003273891.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia 
bronchialis DSM 43247]
 gi|262083918|gb|ACY19886.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia 
bronchialis DSM 43247]
 gi|262086030|gb|ACY21998.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia 
bronchialis DSM 43247]
Length=420

 Score =  565 bits (1457),  Expect = 5e-159, Method: Compositional matrix adjust.
 Identities = 293/436 (68%), Positives = 338/436 (78%), Gaps = 17/436 (3%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            ++N  L+RALLGV+K TV+EDIEF+ED+      ++A VRP      RCGRC R++ WYD
Sbjct  1    MQNATLWRALLGVEK-TVVEDIEFDEDEQT----LVACVRPTRRAGARCGRCQRRSPWYD  55

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            RG G R+WR+LD GT++V LEA+APRVNC  HGPTV AVPWARH AGHT  FD+ VAWLA
Sbjct  56   RGEGRRRWRALDLGTIQVHLEADAPRVNCREHGPTVRAVPWARHGAGHTTGFDEQVAWLA  115

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
              CSK+AV ELMRIAWRTVGAI+ RVWAD EK  DRFA+LRRIGIDEISYKR HRYLTVV
Sbjct  116  TQCSKSAVTELMRIAWRTVGAIITRVWADVEKLHDRFADLRRIGIDEISYKRGHRYLTVV  175

Query  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240
            VDHD+GRLVWAAPG DKATL  FFDALG ER +QITHVSAD ADWI+ VV + CP A++C
Sbjct  176  VDHDTGRLVWAAPGRDKATLEGFFDALGEERCSQITHVSADGADWISTVVADHCPHAVRC  235

Query  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300
            ADPFHVV WAT+ALD  RR AWN AR  A T+ + GR               A+ LK AR
Sbjct  236  ADPFHVVRWATDALDEVRRAAWNQARGAA-TQRRAGRASG-----------HAKALKHAR  283

Query  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360
            YALWKNPE+LT RQ AKLAW+AKTDPRL+RAYLLKE LR VF +   E  +AL+ WI WA
Sbjct  284  YALWKNPENLTVRQQAKLAWVAKTDPRLHRAYLLKEGLRLVFQLPHAEAAEALEVWIRWA  343

Query  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420
            +RCRIP FVEL  RI +H+ +I AA++HGLS G IES NTKIRL+TR+AFGFRSP+ALIA
Sbjct  344  RRCRIPAFVELQRRIVKHQASILAAIEHGLSNGRIESVNTKIRLITRVAFGFRSPEALIA  403

Query  421  LAMLTLAGHRPTLPGR  436
            LAML L GHRP LPGR
Sbjct  404  LAMLNLGGHRPVLPGR  419


>gi|317123719|ref|YP_004097831.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Intrasporangium 
calvum DSM 43043]
 gi|317123942|ref|YP_004098054.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Intrasporangium 
calvum DSM 43043]
 gi|317124019|ref|YP_004098131.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Intrasporangium 
calvum DSM 43043]
 7 more sequence titles
 Length=420

 Score =  565 bits (1455),  Expect = 8e-159, Method: Compositional matrix adjust.
 Identities = 286/437 (66%), Positives = 339/437 (78%), Gaps = 17/437 (3%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            +R+  L+RALLGVDK TVIE +EF+ED+      ++A+VRPRS    RCG CGR    YD
Sbjct  1    MRDASLWRALLGVDK-TVIEQVEFDEDEQ----LLVAQVRPRSRARSRCGVCGRSCPGYD  55

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
             G G R+WR+LD GTV+V LEA+APRV+C  HG  V AVPWARH AGHTYAFD+ VAWLA
Sbjct  56   GGEGRRRWRALDLGTVQVVLEADAPRVSCRQHGVVVAAVPWARHGAGHTYAFDEQVAWLA  115

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
               SKT V +LMRIAWRTVG+I+ RVWADTE++ DRFA L+RIGIDEISYKR HRYLT+V
Sbjct  116  TQASKTTVTQLMRIAWRTVGSIITRVWADTERQFDRFAGLKRIGIDEISYKRGHRYLTIV  175

Query  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240
            VDHDSGRLVWAAPG DKATL  FFDALG +R A +THVSAD ADWIA VVT+RCP A++C
Sbjct  176  VDHDSGRLVWAAPGRDKATLHAFFDALGEQRCAAVTHVSADGADWIAKVVTQRCPQAVRC  235

Query  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300
            ADPFHVV+WAT+ALD  RR AWN AR          R R G+ +        A+ LKGAR
Sbjct  236  ADPFHVVSWATDALDEVRRDAWNQARGAV------TRRRAGRASG------HAKDLKGAR  283

Query  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360
            YALWKNP +LTE+Q AKLAW+A+TDPRLYR YLLKE LR VF +  ++  +ALDRW++WA
Sbjct  284  YALWKNPGNLTEKQQAKLAWVARTDPRLYRGYLLKEGLRLVFQLPHQQAAEALDRWVAWA  343

Query  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420
            +RCRI  FV L  RI +HR +I AA++HGLS G IES NTK+RL+TRIAFGFRSP++LIA
Sbjct  344  RRCRIEAFVTLQRRIVKHRDSILAAIEHGLSNGRIESVNTKVRLITRIAFGFRSPESLIA  403

Query  421  LAMLTLAGHRPTLPGRH  437
            LAML+L GHRP LPGR+
Sbjct  404  LAMLSLGGHRPVLPGRN  420


>gi|262200056|ref|YP_003271264.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia 
bronchialis DSM 43247]
 gi|262083403|gb|ACY19371.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia 
bronchialis DSM 43247]
Length=420

 Score =  561 bits (1447),  Expect = 6e-158, Method: Compositional matrix adjust.
 Identities = 292/436 (67%), Positives = 337/436 (78%), Gaps = 17/436 (3%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            ++N  L+RALLGV+K TV+EDIEF+ED+      ++A VR       RCGRC R++ WYD
Sbjct  1    MQNATLWRALLGVEK-TVVEDIEFDEDEQT----LVACVRHTRRAGARCGRCQRRSPWYD  55

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            RG G R+WR+LD GT++V LEA+APRVNC  HGPTV AVPWARH AGHT  FD+ VAWLA
Sbjct  56   RGEGRRRWRALDLGTIQVHLEADAPRVNCREHGPTVRAVPWARHGAGHTTGFDEQVAWLA  115

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
              CSK+AV ELMRIAWRTVGAI+ RVWAD EK  DRFA+LRRIGIDEISYKR HRYLTVV
Sbjct  116  TQCSKSAVTELMRIAWRTVGAIITRVWADVEKLHDRFADLRRIGIDEISYKRGHRYLTVV  175

Query  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240
            VDHD+GRLVWAAPG DKATL  FFDALG ER +QITHVSAD ADWI+ VV + CP A++C
Sbjct  176  VDHDTGRLVWAAPGRDKATLEGFFDALGEERCSQITHVSADGADWISTVVADHCPHAVRC  235

Query  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300
            ADPFHVV WAT+ALD  RR AWN AR  A T+ + GR               A+ LK AR
Sbjct  236  ADPFHVVRWATDALDEVRRAAWNQARGAA-TQRRAGRASG-----------HAKALKHAR  283

Query  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360
            YALWKNPE+LT RQ AKLAW+AKTDPRL+RAYLLKE LR VF +   E  +AL+ WI WA
Sbjct  284  YALWKNPENLTVRQQAKLAWVAKTDPRLHRAYLLKEGLRLVFQLPHAEAAEALEVWIRWA  343

Query  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420
            +RCRIP FVEL  RI +H+ +I AA++HGLS G IES NTKIRL+TR+AFGFRSP+ALIA
Sbjct  344  RRCRIPAFVELQRRIVKHQASILAAIEHGLSNGRIESVNTKIRLITRVAFGFRSPEALIA  403

Query  421  LAMLTLAGHRPTLPGR  436
            LAML L GHRP LPGR
Sbjct  404  LAMLNLGGHRPVLPGR  419


>gi|239916613|ref|YP_002956171.1| transposase [Micrococcus luteus NCTC 2665]
 gi|239916865|ref|YP_002956423.1| transposase [Micrococcus luteus NCTC 2665]
 gi|239917004|ref|YP_002956562.1| transposase [Micrococcus luteus NCTC 2665]
 10 more sequence titles
 Length=420

 Score =  557 bits (1435),  Expect = 1e-156, Method: Compositional matrix adjust.
 Identities = 293/436 (68%), Positives = 343/436 (79%), Gaps = 17/436 (3%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            +RN  L+R+LLGV+K TV+E IEF+EDD      ++A VRPR+ V  RCGRCGR++  YD
Sbjct  1    MRNASLWRSLLGVEK-TVVEGIEFDEDDQ----LLVAHVRPRARVRGRCGRCGRRSPGYD  55

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            RG G R+WR+LD GTV+V+LEA+APRV C  HGPTV AVPWARH AGHT  FD+ VAWLA
Sbjct  56   RGEGRRRWRALDLGTVQVYLEADAPRVACREHGPTVAAVPWARHGAGHTVVFDEQVAWLA  115

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
              CSK+AV ELMRIAWRTVGAI+ RVWAD E   DRFA LRRIGIDEISYK+ HRYLT+V
Sbjct  116  TQCSKSAVTELMRIAWRTVGAIITRVWADVEALGDRFAGLRRIGIDEISYKKGHRYLTIV  175

Query  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240
            VDHD+GRLVWAAPG DKATL  FF+ALG +R A+ITHVSAD ADWIA VV ERCP+A++C
Sbjct  176  VDHDTGRLVWAAPGRDKATLAAFFEALGPDRCAEITHVSADGADWIAAVVAERCPNAVRC  235

Query  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300
            ADPFH+V WATEALD  RR+AWN+AR   R       GR G +         A+ LK AR
Sbjct  236  ADPFHIVKWATEALDEVRRQAWNEARGAVRQRRA---GRAGGH---------AKALKHAR  283

Query  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360
            YALWKNPE+LT RQ AKLAW+AKTDPRL+RAYLLKE LR VF +  +E + AL+RWI WA
Sbjct  284  YALWKNPENLTTRQQAKLAWVAKTDPRLHRAYLLKEGLRLVFQLPADEAETALERWIGWA  343

Query  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420
            +RCRIP FVEL  RI +H+ +I AA++HGLS G IES NTKIRL+TR+AFGF+SP+ALIA
Sbjct  344  RRCRIPAFVELQRRIVKHKASILAAIEHGLSNGRIESVNTKIRLITRVAFGFKSPEALIA  403

Query  421  LAMLTLAGHRPTLPGR  436
            LAML L GHRP LPGR
Sbjct  404  LAMLNLGGHRPVLPGR  419


>gi|27531092|dbj|BAC54155.1| transposase [Terrabacter sp. DBF63]
 gi|75992411|dbj|BAE45077.1| transposase [Terrabacter sp. DBF63]
 gi|75992415|dbj|BAE45081.1| transposase [Terrabacter sp. DBF63]
 gi|313150333|dbj|BAJ39925.1| putative transposase [Terrabacter sp. DBF63]
Length=420

 Score =  551 bits (1420),  Expect = 8e-155, Method: Compositional matrix adjust.
 Identities = 289/436 (67%), Positives = 341/436 (79%), Gaps = 17/436 (3%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            +RN  L+R+LLGV+K TV+EDIEF+EDD      ++A VRPR+ V  RCGRCGR++  YD
Sbjct  1    MRNASLWRSLLGVEK-TVVEDIEFDEDDQ----LLVAHVRPRARVRGRCGRCGRRSPGYD  55

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            RG G R+WR+LD GTV+V+LEA+APRV C  HGPTV AVPWARH AGHT  FD+ VAWLA
Sbjct  56   RGEGRRRWRALDLGTVQVYLEADAPRVACRQHGPTVAAVPWARHGAGHTLVFDEQVAWLA  115

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
              CSK+AV ELMRIAWRTVGAI+ RVW D E   DRFA LRRIGIDEISYK+ HRYLT+V
Sbjct  116  TQCSKSAVTELMRIAWRTVGAIITRVWTDVEALGDRFAGLRRIGIDEISYKKGHRYLTIV  175

Query  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240
            VDHD+GRLVWAAPG DK TL  FF+ALG +R A ITHVSAD ADWIA VV +RCP+A++C
Sbjct  176  VDHDTGRLVWAAPGRDKPTLARFFEALGPDRCAAITHVSADGADWIAAVVAQRCPNAVRC  235

Query  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300
            ADPFH+V WAT+ALD  RR+AWN+AR   R        R G+ +        A+ LK AR
Sbjct  236  ADPFHIVKWATDALDEVRRQAWNEARGAVRQR------RAGRASG------HAKALKHAR  283

Query  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360
            YALWKNPE+LT RQ AKLAW+AKTDPRL+RAYLLKE LR VF +  +E + AL+RWI WA
Sbjct  284  YALWKNPENLTTRQQAKLAWVAKTDPRLHRAYLLKEGLRLVFQLPADEAETALERWIGWA  343

Query  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420
            +RCRIP FVEL  RI +H+ +I AA++HGLS G IES NTKIRL+TR+AFGF+SP+ALIA
Sbjct  344  RRCRIPAFVELQRRIVKHKASILAAIEHGLSNGRIESVNTKIRLITRVAFGFKSPEALIA  403

Query  421  LAMLTLAGHRPTLPGR  436
            LAML L GHRP LPGR
Sbjct  404  LAMLNLGGHRPVLPGR  419


>gi|308179087|ref|YP_003918493.1| transposase of ISAar34, ISL3 family [Arthrobacter arilaitensis 
Re117]
 gi|307746550|emb|CBT77522.1| transposase of ISAar34, ISL3 family [Arthrobacter arilaitensis 
Re117]
Length=433

 Score =  539 bits (1389),  Expect = 3e-151, Method: Compositional matrix adjust.
 Identities = 270/437 (62%), Positives = 324/437 (75%), Gaps = 6/437 (1%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            ++   ++ ALLGV+K TV        D   +   ++ARV P  ++  RCG C R+ S YD
Sbjct  1    MQKTSIWAALLGVEKTTV-----HHVDTCPETGVLLARVTPHKSLRNRCGICSRRCSRYD  55

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            RG G R+WR+LD GT E +L A APRV CP HG  V AVPWARH AGHT  FD  V+WLA
Sbjct  56   RGEGPRRWRTLDLGTTETYLVAHAPRVRCPEHGVIVAAVPWARHQAGHTRDFDQQVSWLA  115

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
              CSK+AV  LMRIAWRTVG+I+ RVW DT K  D FA+L+RIGIDEISYKR H+Y+TVV
Sbjct  116  TQCSKSAVTVLMRIAWRTVGSIINRVWKDTAKTFDPFADLKRIGIDEISYKRGHKYITVV  175

Query  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240
            VDHDSGRL+WA+PG DKATL  FFDALG ER+AQITHVSADAA+WIA VV ERCP A++ 
Sbjct  176  VDHDSGRLIWASPGRDKATLRKFFDALGEERSAQITHVSADAANWIATVVAERCPQAVRV  235

Query  241  ADPFHVVAWATEALDVERRRAWNDARAIA-RTEPKWGRGRPGKNAAPRPGRERARRLKGA  299
            ADPFHVV WAT ALD ERR +WN AR  A   EP  GRGRP K+A  RP  ++A +LK +
Sbjct  236  ADPFHVVQWATGALDEERRASWNRARKAAEENEPARGRGRPPKDAPERPDSQKATKLKNS  295

Query  300  RYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISW  359
            RYALWKNPEDLT +Q  KL WI +TDPRL RAY LKE LR +F +   +   ALD+W+SW
Sbjct  296  RYALWKNPEDLTVKQKVKLDWIVQTDPRLGRAYYLKEGLRTIFRLPHADAVVALDKWVSW  355

Query  360  AQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALI  419
            A+RCRIP FV+L   I +HR AI A+++HGLS G IES NTKIRL+TR+AFGF++P+ALI
Sbjct  356  ARRCRIPAFVKLQKSIVKHREAILASIEHGLSNGRIESMNTKIRLITRVAFGFKAPEALI  415

Query  420  ALAMLTLAGHRPTLPGR  436
             LAML+L G +P LPGR
Sbjct  416  GLAMLSLGGRKPVLPGR  432


>gi|289753390|ref|ZP_06512768.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis 
EAS054]
 gi|289693977|gb|EFD61406.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis 
EAS054]
Length=277

 Score =  500 bits (1288),  Expect = 2e-139, Method: Compositional matrix adjust.
 Identities = 249/252 (99%), Positives = 250/252 (99%), Gaps = 0/252 (0%)

Query  193  PGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATE  252
            PG  +ATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATE
Sbjct  26   PGPPRATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATE  85

Query  253  ALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTE  312
            ALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTE
Sbjct  86   ALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTE  145

Query  313  RQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELA  372
            RQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELA
Sbjct  146  RQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELA  205

Query  373  ARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPT  432
            ARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPT
Sbjct  206  ARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPT  265

Query  433  LPGRHNHPQISQ  444
            LPGRHNHPQISQ
Sbjct  266  LPGRHNHPQISQ  277


>gi|239917926|ref|YP_002957484.1| transposase [Micrococcus luteus NCTC 2665]
 gi|239839133|gb|ACS30930.1| transposase [Micrococcus luteus NCTC 2665]
Length=350

 Score =  500 bits (1287),  Expect = 2e-139, Method: Compositional matrix adjust.
 Identities = 249/361 (69%), Positives = 287/361 (80%), Gaps = 12/361 (3%)

Query  76   VEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIA  135
            ++V+LEA+APRV C  HGPTV AVPWARH AGHT  FD+ VAWLA  CSK+AV ELMRIA
Sbjct  1    MQVYLEADAPRVACREHGPTVAAVPWARHGAGHTVVFDEQVAWLATQCSKSAVTELMRIA  60

Query  136  WRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGH  195
            WRTVGAI+ RVWAD E   DRFA LRRIGIDEISYK+ HRYLT+VVDHD+GRLVWAAPG 
Sbjct  61   WRTVGAIITRVWADVEALGDRFAGLRRIGIDEISYKKGHRYLTIVVDHDTGRLVWAAPGR  120

Query  196  DKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALD  255
            DKATL  FF+ALG +R A+ITHVSAD ADWIA VV ERCP+A++CADPFH+V WATEALD
Sbjct  121  DKATLAAFFEALGPDRCAEITHVSADGADWIAAVVAERCPNAVRCADPFHIVKWATEALD  180

Query  256  VERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQS  315
              RR+AWN+AR   R       GR G +         A+ LK ARYALWKNPE+LT RQ 
Sbjct  181  EVRRQAWNEARGAVRQRRA---GRAGGH---------AKALKHARYALWKNPENLTTRQQ  228

Query  316  AKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARI  375
            AKLAW+AKTDPRL+RAYLLKE LR VF +  +E + AL+RWI WA+RCRIP FVEL  RI
Sbjct  229  AKLAWVAKTDPRLHRAYLLKEGLRLVFQLPADEAETALERWIGWARRCRIPAFVELQRRI  288

Query  376  KRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPG  435
             +H+ +I AA++HGLS G IES NTKIRL+TR+AFGF+SP+ALIALAML L GHRP LPG
Sbjct  289  VKHKASILAAIEHGLSNGRIESVNTKIRLITRVAFGFKSPEALIALAMLNLGGHRPVLPG  348

Query  436  R  436
            R
Sbjct  349  R  349


>gi|289755931|ref|ZP_06515309.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis 
EAS054]
 gi|289696518|gb|EFD63947.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis 
EAS054]
Length=277

 Score =  498 bits (1282),  Expect = 8e-139, Method: Compositional matrix adjust.
 Identities = 248/252 (99%), Positives = 249/252 (99%), Gaps = 0/252 (0%)

Query  193  PGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATE  252
            PG  +ATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATE
Sbjct  26   PGPPRATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATE  85

Query  253  ALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTE  312
            ALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTE
Sbjct  86   ALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTE  145

Query  313  RQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELA  372
            RQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELA
Sbjct  146  RQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELA  205

Query  373  ARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPT  432
            ARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAML LAGHRPT
Sbjct  206  ARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLALAGHRPT  265

Query  433  LPGRHNHPQISQ  444
            LPGRHNHPQISQ
Sbjct  266  LPGRHNHPQISQ  277


>gi|289446908|ref|ZP_06436652.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis 
CPHL_A]
 gi|289419866|gb|EFD17067.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis 
CPHL_A]
Length=263

 Score =  496 bits (1278),  Expect = 2e-138, Method: Compositional matrix adjust.
 Identities = 248/251 (99%), Positives = 249/251 (99%), Gaps = 0/251 (0%)

Query  194  GHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEA  253
            G  +ATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEA
Sbjct  13   GPPRATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEA  72

Query  254  LDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTER  313
            LDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTER
Sbjct  73   LDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTER  132

Query  314  QSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAA  373
            QSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAA
Sbjct  133  QSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAA  192

Query  374  RIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTL  433
            RIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTL
Sbjct  193  RIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTL  252

Query  434  PGRHNHPQISQ  444
            PGRHNHPQISQ
Sbjct  253  PGRHNHPQISQ  263


>gi|31792506|ref|NP_854999.1| hypothetical protein Mb1345c [Mycobacterium bovis AF2122/97]
 gi|31794972|ref|NP_857465.1| transposase [Mycobacterium bovis AF2122/97]
 gi|121637242|ref|YP_977465.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|31618095|emb|CAD94206.1| POSSIBLE TRANSPOSASE [SECOND PART] [Mycobacterium bovis AF2122/97]
 gi|31620570|emb|CAD96014.1| PUTATIVE TRANSPOSASE [SECOND PART] [Mycobacterium bovis AF2122/97]
 gi|121492889|emb|CAL71360.1| Possible transposase [second part] [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|341601260|emb|CCC63933.1| possible transposase [second part] [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=243

 Score =  489 bits (1258),  Expect = 5e-136, Method: Compositional matrix adjust.
 Identities = 242/243 (99%), Positives = 243/243 (100%), Gaps = 0/243 (0%)

Query  202  LFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVERRRA  261
            +FFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVERRRA
Sbjct  1    MFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVERRRA  60

Query  262  WNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLAWI  321
            WNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLAWI
Sbjct  61   WNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLAWI  120

Query  322  AKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVA  381
            AKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVA
Sbjct  121  AKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVA  180

Query  382  IDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQ  441
            IDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQ
Sbjct  181  IDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQ  240

Query  442  ISQ  444
            ISQ
Sbjct  241  ISQ  243


>gi|289441235|ref|ZP_06430979.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis 
T46]
 gi|289445399|ref|ZP_06435143.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis 
CPHL_A]
 gi|289572450|ref|ZP_06452677.1| LOW QUALITY PROTEIN: transposase for insertion sequence element 
[Mycobacterium tuberculosis K85]
 gi|289573976|ref|ZP_06454203.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis 
K85]
 gi|289414154|gb|EFD11394.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis 
T46]
 gi|289418357|gb|EFD15558.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis 
CPHL_A]
 gi|289536881|gb|EFD41459.1| LOW QUALITY PROTEIN: transposase for insertion sequence element 
[Mycobacterium tuberculosis K85]
 gi|289538407|gb|EFD42985.1| LOW QUALITY PROTEIN: transposase [Mycobacterium tuberculosis 
K85]
Length=263

 Score =  474 bits (1221),  Expect = 1e-131, Method: Compositional matrix adjust.
 Identities = 247/251 (99%), Positives = 248/251 (99%), Gaps = 0/251 (0%)

Query  194  GHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEA  253
            G  +ATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEA
Sbjct  13   GPPRATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEA  72

Query  254  LDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTER  313
            LDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTER
Sbjct  73   LDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTER  132

Query  314  QSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAA  373
            QSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAA
Sbjct  133  QSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAA  192

Query  374  RIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTL  433
            RIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAML LAGHRPTL
Sbjct  193  RIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLALAGHRPTL  252

Query  434  PGRHNHPQISQ  444
            PGRHNHPQISQ
Sbjct  253  PGRHNHPQISQ  263


>gi|256397640|ref|YP_003119204.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Catenulispora 
acidiphila DSM 44928]
 gi|256363866|gb|ACU77363.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Catenulispora 
acidiphila DSM 44928]
Length=425

 Score =  461 bits (1185),  Expect = 1e-127, Method: Compositional matrix adjust.
 Identities = 261/439 (60%), Positives = 305/439 (70%), Gaps = 15/439 (3%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            +RN  L+ ALLG+    VIE ++ +E       +++ +VR ++A  RRCGRC R+   YD
Sbjct  1    MRNKSLWDALLGLAD-AVIESVDVDET----SGQIVVQVRIKAAASRRCGRCLRRCPRYD  55

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            +G   R+WR +D G + V++ AEAPRV+C   G     +PWAR  AGHT  FD  +AWLA
Sbjct  56   QGTSRRRWRHMDAGVLMVWIVAEAPRVSCRDCGVVTCHIPWARAGAGHTADFDHHIAWLA  115

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
               SKT V  L RIAWRTVGAI+ RVWAD E   DRFANL RIGIDEISYK+  RYLT+V
Sbjct  116  TNASKTTVATLARIAWRTVGAIITRVWADIEACTDRFANLSRIGIDEISYKKGQRYLTMV  175

Query  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240
            VDHD+GRL+WA  G D  T+  FFDALG ER   ITHVSADAA WIA  V   CP AI+C
Sbjct  176  VDHDTGRLLWAGVGRDTETVDEFFDALGPERCVAITHVSADAAPWIAKSVRTHCPGAIRC  235

Query  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300
            AD FHVVAWAT+ALD  RR+AWN A   AR   + GR   G           AR LKGAR
Sbjct  236  ADAFHVVAWATKALDTVRRQAWNTAAGRARDTNRTGRNSTGA----------ARVLKGAR  285

Query  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360
            +ALWKNPEDLT  Q  KL WIAKTDP L+RAYLLKE LRHVF +KG  GK ALDRW+SWA
Sbjct  286  WALWKNPEDLTTSQHHKLTWIAKTDPALWRAYLLKEGLRHVFKIKGAAGKTALDRWLSWA  345

Query  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420
             RCRIP FVELA+ IKR+R  ID ALDH LS  LIES NTKIR +TR A+GF +P+ALIA
Sbjct  346  VRCRIPAFVELASTIKRNRTEIDNALDHNLSNALIESINTKIRRITRTAYGFTNPEALIA  405

Query  421  LAMLTLAGHRPTLPGRHNH  439
            LA+L  +GHRP LPGR  H
Sbjct  406  LALLAHSGHRPQLPGRTTH  424


>gi|258654218|ref|YP_003203374.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Nakamurella 
multipartita DSM 44233]
 gi|258557443|gb|ACV80385.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Nakamurella 
multipartita DSM 44233]
Length=433

 Score =  439 bits (1129),  Expect = 4e-121, Method: Compositional matrix adjust.
 Identities = 239/421 (57%), Positives = 293/421 (70%), Gaps = 7/421 (1%)

Query  18   VIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYDRGAGLRQWRSLDWGTVE  77
            ++ED++  + D      ++ RVRP      RCGRC R++ WYDRGAG RQWR++D G   
Sbjct  17   IVEDVDVNDPDL-----IVVRVRPVKRWAGRCGRCRRRSPWYDRGAGRRQWRTVDVGLSR  71

Query  78   VFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWR  137
              +EAEAPRV+C  HG  V  VPWARH AGHT  FD TVAWLA   SKTA  +L+RI+WR
Sbjct  72   AVVEAEAPRVSCREHGVVVAHVPWARHGAGHTLVFDRTVAWLATQTSKTATTQLLRISWR  131

Query  138  TVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDK  197
            TVGAIV+R WAD E+  DR   +RR+GIDEISYKR HR+LTVVVDHD+G L+WAAPG D 
Sbjct  132  TVGAIVSRYWADHERLQDRLREVRRLGIDEISYKRGHRFLTVVVDHDTGHLLWAAPGRDS  191

Query  198  ATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVE  257
            ATL  FFD LG +R A +THVSAD A +I+ VV +RCP+A++CADPFHVV WAT+ALD  
Sbjct  192  ATLHQFFDLLGPDRCALLTHVSADGATYISTVVKQRCPNAVRCADPFHVVGWATDALDKL  251

Query  258  RRRAWNDARAIARTE--PKWGRGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQS  315
            RR   + AR  AR     +   G      A + G +  + + GAR AL +N EDLTE Q 
Sbjct  252  RRIVISTARRQARRAAVDRIAGGSSPVVTAGQAGADLVKGMAGARSALLRNSEDLTENQQ  311

Query  316  AKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARI  375
             KLAWIA TDP L+RAYLLKE LR +F +  E+   AL+ WI+WA+   I +F  LA RI
Sbjct  312  VKLAWIALTDPDLHRAYLLKEGLRLIFKLPVEQAATALENWITWARTAGIGLFSSLAKRI  371

Query  376  KRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPG  435
             RHR +I AA++H +S G +ES N KIRL+TR+AFGF SP ALIALAML L GHRP LPG
Sbjct  372  TRHRASILAAIEHHMSNGRVESVNAKIRLITRVAFGFASPHALIALAMLRLGGHRPALPG  431

Query  436  R  436
            R
Sbjct  432  R  432


>gi|258651670|ref|YP_003200826.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Nakamurella 
multipartita DSM 44233]
 gi|258655426|ref|YP_003204582.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Nakamurella 
multipartita DSM 44233]
 gi|258554895|gb|ACV77837.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Nakamurella 
multipartita DSM 44233]
 gi|258558651|gb|ACV81593.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Nakamurella 
multipartita DSM 44233]
Length=433

 Score =  433 bits (1114),  Expect = 3e-119, Method: Compositional matrix adjust.
 Identities = 226/381 (60%), Positives = 271/381 (72%), Gaps = 2/381 (0%)

Query  58   WYDRGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVA  117
            WYDRGAG RQWR++D G     +EAEAPRV+C  HG  V  VPWARH AGHT  FD TVA
Sbjct  52   WYDRGAGRRQWRTVDVGLSRAVVEAEAPRVSCREHGVVVAHVPWARHGAGHTLVFDRTVA  111

Query  118  WLAVACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYL  177
            WLA   SKTA  +L+RI+WRTVGAIV+R WAD E+  DR   +RR+GIDEISYKR HR+L
Sbjct  112  WLATQTSKTATTQLLRISWRTVGAIVSRYWADHERLQDRLRGVRRLGIDEISYKRGHRFL  171

Query  178  TVVVDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDA  237
            TVVVDHD+G L+WAAPG D ATL  FFD LG +R A +THVSAD A +I+ VV +RCP+A
Sbjct  172  TVVVDHDTGHLLWAAPGRDSATLHQFFDLLGPDRCALLTHVSADGATYISTVVKQRCPNA  231

Query  238  IQCADPFHVVAWATEALDVERRRAWNDARAIARTEP--KWGRGRPGKNAAPRPGRERARR  295
            ++CADPFHVV WAT+ALD  RR   + AR  AR     +   G      A + G +  + 
Sbjct  232  VRCADPFHVVGWATDALDKLRRIVISTARRQARRAAVDRIAGGSSPVVTAGQAGADLVKG  291

Query  296  LKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDR  355
            + GAR AL +N EDLTE Q  KLAWIA TDP L+RAYLLKE LR +F +  E+   AL+ 
Sbjct  292  MAGARSALLRNSEDLTENQQVKLAWIALTDPDLHRAYLLKEGLRLIFKLPVEQAATALEN  351

Query  356  WISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSP  415
            WI+WA+   I +F  LA RI RHR +I AA++H +S G +ES N KIRL+TR+AFGF SP
Sbjct  352  WITWARTAGIGLFSSLAKRITRHRASILAAIEHHMSNGRVESVNAKIRLITRVAFGFASP  411

Query  416  QALIALAMLTLAGHRPTLPGR  436
             ALIALAML L GHRP LPGR
Sbjct  412  HALIALAMLRLGGHRPALPGR  432


>gi|258655481|ref|YP_003204637.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Nakamurella 
multipartita DSM 44233]
 gi|258558706|gb|ACV81648.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Nakamurella 
multipartita DSM 44233]
Length=433

 Score =  428 bits (1101),  Expect = 9e-118, Method: Compositional matrix adjust.
 Identities = 224/381 (59%), Positives = 269/381 (71%), Gaps = 2/381 (0%)

Query  58   WYDRGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVA  117
            WYDRGAG RQWR++D G     +EAEAPRV+C  HG  V  VPWARH AG T  FD TVA
Sbjct  52   WYDRGAGRRQWRTVDVGLSRAVVEAEAPRVSCREHGVVVAHVPWARHGAGQTLVFDRTVA  111

Query  118  WLAVACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYL  177
            WLA   SKTA  +L+RI+WRTVGAI +R WAD E+  DR   +RR+GIDEISYKR HR+L
Sbjct  112  WLATQTSKTATTQLLRISWRTVGAIESRYWADHERLQDRLRGVRRLGIDEISYKRGHRFL  171

Query  178  TVVVDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDA  237
            TVVVDHD+G L+WAAPG D ATL  FFD LG +R A +THVSAD A +I+ VV +RCP+A
Sbjct  172  TVVVDHDTGHLLWAAPGRDSATLHQFFDLLGPDRCALLTHVSADGATYISTVVKQRCPNA  231

Query  238  IQCADPFHVVAWATEALDVERRRAWNDARAIARTEP--KWGRGRPGKNAAPRPGRERARR  295
            ++CADPFHVV WAT+ALD  RR   + AR  AR     +   G      A + G +  + 
Sbjct  232  VRCADPFHVVGWATDALDKLRRIVISTARRQARRAAVDRIAGGSSPVVTAGQAGADLVKG  291

Query  296  LKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDR  355
            + GAR AL +N EDLTE Q  KLAWIA TDP L+RAYLLKE LR +F +  E+   AL+ 
Sbjct  292  MAGARSALLRNSEDLTENQQVKLAWIALTDPDLHRAYLLKEGLRLIFKLPVEQAATALEN  351

Query  356  WISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSP  415
            WI+WA+   I +F  LA RI RHR +I AA++H +S G +ES N KIRL+TR+AFGF SP
Sbjct  352  WITWARTAGIGLFSSLAKRITRHRASILAAIEHHMSNGRVESVNAKIRLITRVAFGFASP  411

Query  416  QALIALAMLTLAGHRPTLPGR  436
             ALIALAML L GHRP LPGR
Sbjct  412  HALIALAMLRLGGHRPALPGR  432


>gi|119716001|ref|YP_922966.1| transposase, IS204/IS1001/IS1096/IS1165 family protein [Nocardioides 
sp. JS614]
 gi|119716741|ref|YP_923706.1| transposase, IS204/IS1001/IS1096/IS1165 family protein [Nocardioides 
sp. JS614]
 gi|119717099|ref|YP_924064.1| transposase, IS204/IS1001/IS1096/IS1165 family protein [Nocardioides 
sp. JS614]
 7 more sequence titles
 Length=432

 Score =  404 bits (1037),  Expect = 2e-110, Method: Compositional matrix adjust.
 Identities = 229/437 (53%), Positives = 286/437 (66%), Gaps = 7/437 (1%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            +R+V L+R LLG++  TVIE +E + D+      ++  VRP +    RCGRC   A+ YD
Sbjct  1    MRDVSLWRCLLGLED-TVIEGVELDRDERV----LVVAVRPMARRRGRCGRCRAPAAGYD  55

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
             G G R+WR+LD  TV V+LEA++PRV C  HG  V  VPWARH A  T+AF+D VAWL 
Sbjct  56   AGRGRRRWRALDSATVRVYLEADSPRVRCRAHGVVVAHVPWARHRARATHAFEDQVAWLV  115

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
               S + V ELMR++WRTV  I+ RVW     R+D    L RIGIDE+S++RH RYL  V
Sbjct  116  TKTSLSTVAELMRVSWRTVSGILTRVWNQIAARVDLLDGLTRIGIDEVSWRRHQRYLLAV  175

Query  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240
            V+HD+GRLVW   G+  AT+  FFDALG  R AQITH+SADAA +IA    + CP A++ 
Sbjct  176  VNHDTGRLVWVGKGNTTATVQSFFDALGPHRCAQITHISADAAPYIAKSTAKNCPQAVRV  235

Query  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGR-PGKNAAPRPGRERARRLKGA  299
            ADPFHVV WA +AL   R   W + R IAR   + GRGR P       P  +R R L  +
Sbjct  236  ADPFHVVKWANDALGEVRLEVWRETRRIARANSR-GRGRAPADVQEEFPAYQRLRILTRS  294

Query  300  RYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISW  359
            RYALWKNPE+LT  Q A+L WIAKTDPRL+RAY LKE LR V  +   E + A+D W   
Sbjct  295  RYALWKNPENLTTHQQARLDWIAKTDPRLWRAYQLKEGLRAVLRLPAAEARIAIDAWCRS  354

Query  360  AQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALI  419
            A+RCRI  FV+LA  +   R  I AA++HGLS  + ES NT+IRL  RIAFG + P ALI
Sbjct  355  ARRCRIAQFVDLARMVAEQRGPILAAIEHGLSNAISESVNTRIRLRNRIAFGIKDPDALI  414

Query  420  ALAMLTLAGHRPTLPGR  436
            +L MLTL+GH P LPGR
Sbjct  415  SLLMLTLSGHTPALPGR  431


>gi|289761468|ref|ZP_06520846.1| transposase [Mycobacterium tuberculosis GM 1503]
 gi|289708974|gb|EFD72990.1| transposase [Mycobacterium tuberculosis GM 1503]
Length=251

 Score =  399 bits (1025),  Expect = 5e-109, Method: Compositional matrix adjust.
 Identities = 206/225 (92%), Positives = 207/225 (92%), Gaps = 2/225 (0%)

Query  220  ADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGR  279
            ADA  WIADV +   PDAI     FHVVAWATE      RRAWNDARAIARTEPKWGRGR
Sbjct  29   ADARTWIADV-SRALPDAIHRRS-FHVVAWATERSTSSGRRAWNDARAIARTEPKWGRGR  86

Query  280  PGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLR  339
            PGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLR
Sbjct  87   PGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLR  146

Query  340  HVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTN  399
            HVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTN
Sbjct  147  HVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTN  206

Query  400  TKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ  444
            TKIRLLTRIAFGFRSPQALIALAMLTLAGHRPT PGRHNHPQISQ
Sbjct  207  TKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTRPGRHNHPQISQ  251


>gi|31792507|ref|NP_855000.1| hypothetical protein Mb1346c [Mycobacterium bovis AF2122/97]
 gi|31794971|ref|NP_857464.1| transposase [Mycobacterium bovis AF2122/97]
 gi|121637243|ref|YP_977466.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|31618096|emb|CAD94207.1| POSSIBLE TRANSPOSASE [FIRST PART] [Mycobacterium bovis AF2122/97]
 gi|31620569|emb|CAD96013.1| PUTATIVE TRANSPOSASE [FIRST PART] [Mycobacterium bovis AF2122/97]
 gi|121492890|emb|CAL71361.1| Possible transposase [first part] [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|341601261|emb|CCC63934.1| possible transposase [first part] [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=205

 Score =  391 bits (1004),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 194/200 (97%), Positives = 195/200 (98%), Gaps = 0/200 (0%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD
Sbjct  1    MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA
Sbjct  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
            VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV
Sbjct  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180

Query  181  VDHDSGRLVWAAPGHDKATL  200
            VDHDSGRLVWAAP H    L
Sbjct  181  VDHDSGRLVWAAPSHPGLVL  200


>gi|289569325|ref|ZP_06449552.1| transposase [Mycobacterium tuberculosis T17]
 gi|289572048|ref|ZP_06452275.1| transposase [Mycobacterium tuberculosis T17]
 gi|289748323|ref|ZP_06507701.1| transposase [Mycobacterium tuberculosis T92]
 gi|289749870|ref|ZP_06509248.1| transposase [Mycobacterium tuberculosis T92]
 gi|289543079|gb|EFD46727.1| transposase [Mycobacterium tuberculosis T17]
 gi|289545802|gb|EFD49450.1| transposase [Mycobacterium tuberculosis T17]
 gi|289688910|gb|EFD56339.1| transposase [Mycobacterium tuberculosis T92]
 gi|289690457|gb|EFD57886.1| transposase [Mycobacterium tuberculosis T92]
Length=205

 Score =  388 bits (996),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 193/200 (97%), Positives = 194/200 (97%), Gaps = 0/200 (0%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD
Sbjct  1    MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAV WARHHAGHTYAFDDTVAWLA
Sbjct  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVAWARHHAGHTYAFDDTVAWLA  120

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
            VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV
Sbjct  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180

Query  181  VDHDSGRLVWAAPGHDKATL  200
            VDHDSGRLVWAAP H    L
Sbjct  181  VDHDSGRLVWAAPSHPGLVL  200


>gi|111019752|ref|YP_702724.1| transposase [Rhodococcus jostii RHA1]
 gi|110819282|gb|ABG94566.1| probable transposase [Rhodococcus jostii RHA1]
Length=643

 Score =  345 bits (885),  Expect = 8e-93, Method: Compositional matrix adjust.
 Identities = 195/437 (45%), Positives = 256/437 (59%), Gaps = 27/437 (6%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            +R  R+ + LLG+D+  +I D+ F +D+ G    ++  + P ++V  RC  C ++   YD
Sbjct  233  LRAARILQKLLGIDRARII-DVAFTDDERGPA--IVVTLEPHASVRSRCPHCEQRCPGYD  289

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            R    RQWR LD G +  F+ A   R+ CP HG     VPWAR  A  T AFDD VAWLA
Sbjct  290  RPNRPRQWRHLDMGGMRCFVRASVSRIRCPDHGVVTEMVPWARPAANMTRAFDDNVAWLA  349

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
                 T+VCE  R+AWR+V  IV RV  D   R DR   LRR+GIDEI+Y++ HRYLTVV
Sbjct  350  AHSPATSVCEYARVAWRSVTRIVTRVVGDAVGRTDRLQGLRRLGIDEIAYRKGHRYLTVV  409

Query  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240
            VDHD+GRLVWAA GH+++TL  FFD LG ER A++TH+SADAA WIA  V  R P   +C
Sbjct  410  VDHDTGRLVWAAEGHNESTLNRFFDELGEERTARLTHISADAAKWIASTVRSRAPQVKRC  469

Query  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300
             DPFHV+ W T ALD  R      +R ++R    WG              +R RR    R
Sbjct  470  MDPFHVIQWMTRALDRLR------SRVLSRL---WG------------FTDRDRR--HLR  506

Query  301  YALWKNPEDLTERQ-SAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISW  359
            +AL KN E+L   Q S +   +   +  L R Y++KE L+HV+S   +     L  W   
Sbjct  507  WALLKNVENLNPAQISVRAKILEDRNSELCRGYVMKEQLQHVYSGSKKRASARLRAWRQM  566

Query  360  AQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALI  419
            AQ  RIP  V LA  I R+R  I  A+++ LS   +E+ NT +R LT+ ++GFRSP+ALI
Sbjct  567  AQDSRIPELVGLAKSIARYRREILNAIEYDLSNARVEANNTHLRSLTKRSYGFRSPEALI  626

Query  420  ALAMLTLAGHRPTLPGR  436
            A+A LT  G  P LP R
Sbjct  627  AMATLTRGGACPALPQR  643


>gi|323717464|gb|EGB26667.1| transposase [Mycobacterium tuberculosis CDC1551A]
Length=158

 Score =  319 bits (818),  Expect = 6e-85, Method: Compositional matrix adjust.
 Identities = 158/158 (100%), Positives = 158/158 (100%), Gaps = 0/158 (0%)

Query  287  RPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKG  346
            RPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKG
Sbjct  1    RPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKG  60

Query  347  EEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLT  406
            EEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLT
Sbjct  61   EEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLT  120

Query  407  RIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ  444
            RIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ
Sbjct  121  RIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ  158


>gi|323720270|gb|EGB29369.1| transposase [Mycobacterium tuberculosis CDC1551A]
Length=158

 Score =  316 bits (810),  Expect = 4e-84, Method: Compositional matrix adjust.
 Identities = 157/158 (99%), Positives = 157/158 (99%), Gaps = 0/158 (0%)

Query  287  RPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKG  346
            RPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKG
Sbjct  1    RPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKG  60

Query  347  EEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLT  406
            EEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLT
Sbjct  61   EEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLT  120

Query  407  RIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ  444
            RIAFGFRSPQALIALAMLTLAGHRPT PGRHNHPQISQ
Sbjct  121  RIAFGFRSPQALIALAMLTLAGHRPTRPGRHNHPQISQ  158


>gi|308406252|ref|ZP_07495711.2| hypothetical protein TMLG_00291 [Mycobacterium tuberculosis SUMu012]
 gi|308363943|gb|EFP52794.1| hypothetical protein TMLG_00291 [Mycobacterium tuberculosis SUMu012]
Length=156

 Score =  315 bits (807),  Expect = 9e-84, Method: Compositional matrix adjust.
 Identities = 156/156 (100%), Positives = 156/156 (100%), Gaps = 0/156 (0%)

Query  289  GRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEE  348
            GRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEE
Sbjct  1    GRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEE  60

Query  349  GKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRI  408
            GKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRI
Sbjct  61   GKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRI  120

Query  409  AFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ  444
            AFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ
Sbjct  121  AFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ  156


>gi|308379624|ref|ZP_07486938.2| hypothetical protein TMJG_01053 [Mycobacterium tuberculosis SUMu010]
 gi|308356351|gb|EFP45202.1| hypothetical protein TMJG_01053 [Mycobacterium tuberculosis SUMu010]
Length=151

 Score =  306 bits (784),  Expect = 5e-81, Method: Compositional matrix adjust.
 Identities = 151/151 (100%), Positives = 151/151 (100%), Gaps = 0/151 (0%)

Query  294  RRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQAL  353
            RRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQAL
Sbjct  1    RRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQAL  60

Query  354  DRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFR  413
            DRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFR
Sbjct  61   DRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFR  120

Query  414  SPQALIALAMLTLAGHRPTLPGRHNHPQISQ  444
            SPQALIALAMLTLAGHRPTLPGRHNHPQISQ
Sbjct  121  SPQALIALAMLTLAGHRPTLPGRHNHPQISQ  151


>gi|308373828|ref|ZP_07433768.2| hypothetical protein TMFG_02033 [Mycobacterium tuberculosis SUMu006]
 gi|308343991|gb|EFP32842.1| hypothetical protein TMFG_02033 [Mycobacterium tuberculosis SUMu006]
Length=149

 Score =  300 bits (767),  Expect = 4e-79, Method: Compositional matrix adjust.
 Identities = 148/149 (99%), Positives = 148/149 (99%), Gaps = 0/149 (0%)

Query  296  LKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDR  355
            LKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDR
Sbjct  1    LKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDR  60

Query  356  WISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSP  415
            WISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSP
Sbjct  61   WISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSP  120

Query  416  QALIALAMLTLAGHRPTLPGRHNHPQISQ  444
            QALIALAMLTLAGHRPT PGRHNHPQISQ
Sbjct  121  QALIALAMLTLAGHRPTRPGRHNHPQISQ  149


>gi|308380042|ref|ZP_07488479.2| hypothetical protein TMKG_01813 [Mycobacterium tuberculosis SUMu011]
 gi|308362843|gb|EFP51694.1| hypothetical protein TMKG_01813 [Mycobacterium tuberculosis SUMu011]
Length=146

 Score =  297 bits (760),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 146/146 (100%), Positives = 146/146 (100%), Gaps = 0/146 (0%)

Query  299  ARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWIS  358
            ARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWIS
Sbjct  1    ARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWIS  60

Query  359  WAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQAL  418
            WAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQAL
Sbjct  61   WAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQAL  120

Query  419  IALAMLTLAGHRPTLPGRHNHPQISQ  444
            IALAMLTLAGHRPTLPGRHNHPQISQ
Sbjct  121  IALAMLTLAGHRPTLPGRHNHPQISQ  146


>gi|262200390|ref|YP_003271598.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia 
bronchialis DSM 43247]
 gi|262083737|gb|ACY19705.1| transposase IS204/IS1001/IS1096/IS1165 family protein [Gordonia 
bronchialis DSM 43247]
Length=406

 Score =  292 bits (748),  Expect = 8e-77, Method: Compositional matrix adjust.
 Identities = 177/434 (41%), Positives = 228/434 (53%), Gaps = 30/434 (6%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            +R   + + +L +D   ++ED+  EE        V+  VR  +    RCG CGR+   YD
Sbjct  1    MRMSSVVQKVLTID--AIVEDVTLEETTVDPDGMVVVSVRAYARDRSRCGECGRRCPGYD  58

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            + +  R+WR LD       L A   RV C  HG    AVPWAR  A  T AFDD  AWLA
Sbjct  59   QVSARRRWRHLDVAGRRCVLAASLRRVRCTVHGVVTEAVPWARPRARFTRAFDDMAAWLA  118

Query  121  VACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVV  180
               + +AV + +R+AWRTV  IV RV  D    IDR   L  +GIDEI+Y++ HRYLTVV
Sbjct  119  AHATVSAVTQFLRVAWRTVSGIVERVVDDHFAGIDRLDGLVNVGIDEIAYRKGHRYLTVV  178

Query  181  VDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQC  240
            ++HD+G +VWA  G D A LG FFDALGAERAA I  VSAD A+WI   VT R P AIQC
Sbjct  179  INHDTGLIVWAKEGRDSAVLGEFFDALGAERAAMIEKVSADGAEWIWSAVTTRAPHAIQC  238

Query  241  ADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKGAR  300
             D FH++ WA   +D  RR          RT    G G                  KGA 
Sbjct  239  LDVFHLIQWAGAMVDKVRR----------RTVATHGGG------------------KGAM  270

Query  301  YALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWA  360
            +A+ K+  D +  Q   +  +   +  LY AY+LKE LR     KG      L    +WA
Sbjct  271  WAVRKSHGDQSPEQRGIVEQLRADNSDLYEAYMLKEQLREAIRSKGRRRLVLLTGVQAWA  330

Query  361  QRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIA  420
            +   IP    L   +  +   I  AL H +S    E+TNT +R LT+ A+GF +P+ALIA
Sbjct  331  RASDIPEIAALGRTLDLYNTRIRNALRHNISNARSEATNTHLRALTKRAYGFHTPEALIA  390

Query  421  LAMLTLAGHRPTLP  434
            +A LT  G  P LP
Sbjct  391  MAELTRGGACPELP  404


>gi|294995288|ref|ZP_06800979.1| transposase [Mycobacterium tuberculosis 210]
Length=145

 Score =  292 bits (747),  Expect = 9e-77, Method: Compositional matrix adjust.
 Identities = 144/145 (99%), Positives = 145/145 (100%), Gaps = 0/145 (0%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD
Sbjct  1    MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA
Sbjct  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120

Query  121  VACSKTAVCELMRIAWRTVGAIVAR  145
            VACSKTAVCELMRIAWRTVGAIVAR
Sbjct  121  VACSKTAVCELMRIAWRTVGAIVAR  145


>gi|84495582|ref|ZP_00994701.1| IS1557, transposase [Janibacter sp. HTCC2649]
 gi|84498150|ref|ZP_00996947.1| IS1557, transposase [Janibacter sp. HTCC2649]
 gi|84381650|gb|EAP97533.1| IS1557, transposase [Janibacter sp. HTCC2649]
 gi|84385075|gb|EAQ00955.1| IS1557, transposase [Janibacter sp. HTCC2649]
Length=336

 Score =  288 bits (737),  Expect = 1e-75, Method: Compositional matrix adjust.
 Identities = 163/343 (48%), Positives = 207/343 (61%), Gaps = 20/343 (5%)

Query  99   VPWARHHAGHTYAFDDTVAWLAVACSKTAVCELMRIAWRTVGAIVARVWAD--TEKRIDR  156
            VPWARH A HT AF+D  AW A   S TAV  L+R AWRT+G+IV RV AD       D 
Sbjct  5    VPWARHGARHTTAFEDMAAWAATQMSITAVTTLLRCAWRTIGSIVTRVLADRRAASGSDG  64

Query  157  FANLRRIGIDEISYKRHHRYLTVVVDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQIT  216
               LRRIGIDE++Y+R  RYL VVVDHD+GRLVW      K T+  FF ALG ER A +T
Sbjct  65   LDGLRRIGIDEVAYRRGRRYLVVVVDHDTGRLVWVGSRARKETVNQFFVALGPERTAHLT  124

Query  217  HVSADAADWIADVVTERCPDAIQCADPFHVVAWATEALDVERRRAWNDARAIARTEPKWG  276
            HV++D+A WIA  V E  P AI CADPFH+V WA +ALD  RR+ WN  R          
Sbjct  125  HVTSDSASWIASPVAEHAPKAIHCADPFHIVQWAGDALDACRRQVWNSVRI---------  175

Query  277  RGRPGKNAAPRPGRERARRLKGARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKE  336
            R + G  AA   G      +K   + L  NP+   ++    ++W+A T P L+RA+ LKE
Sbjct  176  RQKRGSGAATGAGVP----VKNIMWTLRMNPDRWGDQHVESMSWLAATHPDLHRAWQLKE  231

Query  337  SLRHVFSV-----KGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLS  391
            +LR VF+      +G    + L+ W + A   ++  F+ELA +I  HR  IDAAL  GL+
Sbjct  232  ALRAVFATGTGNDRGVTAMELLESWTAHALASQLEPFIELALKITAHRKTIDAALTSGLN  291

Query  392  QGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLP  434
              L ES N KIR++TR A+GF +  ALIALAML+L  +RPT P
Sbjct  292  NALTESANNKIRVITRRAYGFHNVDALIALAMLSLGIYRPTNP  334


>gi|308378902|ref|ZP_07484255.2| hypothetical protein TMJG_03956 [Mycobacterium tuberculosis SUMu010]
 gi|308358962|gb|EFP47813.1| hypothetical protein TMJG_03956 [Mycobacterium tuberculosis SUMu010]
Length=141

 Score =  287 bits (735),  Expect = 2e-75, Method: Compositional matrix adjust.
 Identities = 141/141 (100%), Positives = 141/141 (100%), Gaps = 0/141 (0%)

Query  304  WKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRC  363
            WKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRC
Sbjct  1    WKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRC  60

Query  364  RIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAM  423
            RIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAM
Sbjct  61   RIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAM  120

Query  424  LTLAGHRPTLPGRHNHPQISQ  444
            LTLAGHRPTLPGRHNHPQISQ
Sbjct  121  LTLAGHRPTLPGRHNHPQISQ  141


>gi|134098201|ref|YP_001103862.1| IS1557, transposase [Saccharopolyspora erythraea NRRL 2338]
 gi|133910824|emb|CAM00937.1| IS1557, transposase [Saccharopolyspora erythraea NRRL 2338]
Length=297

 Score =  284 bits (726),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 162/264 (62%), Positives = 190/264 (72%), Gaps = 5/264 (1%)

Query  3    NVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYDRG  62
             VR++  LLGV    V+E + F+E +      V  R R R         C R+   YD G
Sbjct  3    GVRVWGRLLGVHA-AVVETVGFDEAEQVVVVGVRVRRRDRDRCGV----CSRRCPRYDAG  57

Query  63   AGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLAVA  122
             G R+WR+LD GTV  F+EA+APRV C  HG  V AVPWARH AGHT AFDDTV WLA  
Sbjct  58   RGRRRWRALDLGTVRAFVEADAPRVRCHEHGVVVAAVPWARHGAGHTRAFDDTVTWLATT  117

Query  123  CSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTVVVD  182
             S+T V +LMRIAW TVG+I++RV AD + ++DR A LRRIGIDEISYK++HRYLTVVVD
Sbjct  118  TSRTTVRQLMRIAWPTVGSIISRVRADIDAQVDRLAGLRRIGIDEISYKKNHRYLTVVVD  177

Query  183  HDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVTERCPDAIQCAD  242
            HD+GRLVWAA G+DK TL  FFDALG +R AQITHVSADAA WIA  V + CPDAI+CAD
Sbjct  178  HDTGRLVWAAAGNDKPTLATFFDALGPDRCAQITHVSADAAAWIARTVQQYCPDAIRCAD  237

Query  243  PFHVVAWATEALDVERRRAWNDAR  266
            PFHVV WAT+ALD  RR+AWN AR
Sbjct  238  PFHVVKWATDALDAVRRQAWNTAR  261


>gi|291004378|ref|ZP_06562351.1| IS1557, transposase [Saccharopolyspora erythraea NRRL 2338]
Length=281

 Score =  284 bits (726),  Expect = 3e-74, Method: Compositional matrix adjust.
 Identities = 148/215 (69%), Positives = 170/215 (80%), Gaps = 0/215 (0%)

Query  52   CGRKASWYDRGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYA  111
            C R+   YD G G R+WR+LD GTV  F+EA+APRV C  HG  V AVPWARH AGHT A
Sbjct  31   CSRRCPRYDAGRGRRRWRALDLGTVRAFVEADAPRVRCHEHGVVVAAVPWARHGAGHTRA  90

Query  112  FDDTVAWLAVACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYK  171
            FDDTV WLA   S+T V +LMRIAW TVG+I++RV AD + ++DR A LRRIGIDEISYK
Sbjct  91   FDDTVTWLATTTSRTTVRQLMRIAWPTVGSIISRVRADIDAQVDRLAGLRRIGIDEISYK  150

Query  172  RHHRYLTVVVDHDSGRLVWAAPGHDKATLGLFFDALGAERAAQITHVSADAADWIADVVT  231
            ++HRYLTVVVDHD+GRLVWAA G+DK TL  FFDALG +R AQITHVSADAA WIA  V 
Sbjct  151  KNHRYLTVVVDHDTGRLVWAAAGNDKPTLATFFDALGPDRCAQITHVSADAAAWIARTVQ  210

Query  232  ERCPDAIQCADPFHVVAWATEALDVERRRAWNDAR  266
            + CPDAI+CADPFHVV WAT+ALD  RR+AWN AR
Sbjct  211  QYCPDAIRCADPFHVVKWATDALDAVRRQAWNTAR  245


>gi|33867237|ref|NP_898795.1| putative transposase [Rhodococcus erythropolis]
 gi|33669071|gb|AAP74065.1| putative transposase [Rhodococcus erythropolis]
Length=419

 Score =  266 bits (680),  Expect = 5e-69, Method: Compositional matrix adjust.
 Identities = 180/446 (41%), Positives = 230/446 (52%), Gaps = 35/446 (7%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASW-Y  59
            +R   L   LL + K T I D+E  +D      RV   VRP+   +R C  C       Y
Sbjct  1    MRATTLLNRLLPLPKAT-IRDVEIVDD------RVRVAVRPQRHRMR-CPHCDYSTRHRY  52

Query  60   DRGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWL  119
            D       WR LD G     L     R+ CP HG    AV +AR  +G T  F+D V WL
Sbjct  53   DTRDVDSSWRHLDLGGRVCVLTLRRRRLRCPEHGVLAEAVDFARPGSGFTRDFEDLVVWL  112

Query  120  AVACSKTAVCELMRIAWRTVGAIVARVWADTEKRIDRFANLRRIGIDEISYKRHHRYLTV  179
            A    K+ V    RI WRTVGA+  RV A+ +   DRF NL  IG+DEIS++RHH+YLT+
Sbjct  113  ATKTDKSTVSVFCRITWRTVGAMCTRVAAE-KLSPDRFTNLVDIGVDEISWRRHHKYLTL  171

Query  180  VVDHDSGRLVWAAPGHDKATLGLFF-DALGAERAAQITHVSADAADWIADVVTERCPDAI  238
            + DHD+G +VW   G   A L  FF D L    A Q+  VS D        V    P A 
Sbjct  172  ISDHDTGTIVWGTEGKSAAALDEFFTDTLPDGAAEQVAAVSMDLGPAYRKSVRAHAPQAT  231

Query  239  QCADPFHVVAWATEALDVERRRAWNDARAIARTEPKWGRGRPGKNAAPRPGRERARRLKG  298
             C DPFHVV  AT ALD  RRR W  AR ++                    ++ A+  KG
Sbjct  232  ICFDPFHVVKLATAALDDVRRRQWQLARTLS-------------------DKQIAKTYKG  272

Query  299  ARYALWKNPEDLTERQSAKLAWIAKTDPRLYRAYLLKESLRHVFS--VKGEEGKQALDRW  356
            AR+AL KNPE+LT +Q + L  + +    L RAY LKE+LR VF+  +  ++    L RW
Sbjct  273  ARWALLKNPENLTVKQESTLDALKRHGGALVRAYELKEALRAVFAGDLDADQVHTMLGRW  332

Query  357  ISWAQRCRIPVFVELAARIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQ  416
             SWAQRCRIP FV++   I+ HR  I AA+  GL+ G  E  N K+RL+ R A+GF S +
Sbjct  333  CSWAQRCRIPQFVKVGRTIREHRDGILAAVTRGLANGRHEGLNNKVRLIIRRAYGFHSAE  392

Query  417  ALIALAMLTLAGHRPTLP---GRHNH  439
              +A+ MLT       LP   G H H
Sbjct  393  NALAMVMLTCGPVTLDLPYHMGTHPH  418


>gi|308373106|ref|ZP_07431030.2| hypothetical protein TMEG_01210 [Mycobacterium tuberculosis SUMu005]
 gi|308338894|gb|EFP27745.1| hypothetical protein TMEG_01210 [Mycobacterium tuberculosis SUMu005]
Length=142

 Score =  263 bits (671),  Expect = 6e-68, Method: Compositional matrix adjust.
 Identities = 130/131 (99%), Positives = 130/131 (99%), Gaps = 0/131 (0%)

Query  314  QSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAA  373
            QSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAA
Sbjct  12   QSAKLAWIAKTDPRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAA  71

Query  374  RIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTL  433
            RIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPT 
Sbjct  72   RIKRHRVAIDAALDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTR  131

Query  434  PGRHNHPQISQ  444
            PGRHNHPQISQ
Sbjct  132  PGRHNHPQISQ  142


>gi|308372662|ref|ZP_07429403.2| hypothetical protein TMDG_01536 [Mycobacterium tuberculosis SUMu004]
 gi|308332661|gb|EFP21512.1| hypothetical protein TMDG_01536 [Mycobacterium tuberculosis SUMu004]
Length=135

 Score =  248 bits (633),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 121/121 (100%), Positives = 121/121 (100%), Gaps = 0/121 (0%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD
Sbjct  15   VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  74

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA
Sbjct  75   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  134

Query  121  V  121
            V
Sbjct  135  V  135


>gi|308380043|ref|ZP_07488480.2| hypothetical protein TMKG_01814 [Mycobacterium tuberculosis SUMu011]
 gi|308362820|gb|EFP51671.1| hypothetical protein TMKG_01814 [Mycobacterium tuberculosis SUMu011]
Length=137

 Score =  246 bits (627),  Expect = 7e-63, Method: Compositional matrix adjust.
 Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD
Sbjct  15   VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  74

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA
Sbjct  75   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  134


>gi|323720192|gb|EGB29292.1| transposase [Mycobacterium tuberculosis CDC1551A]
Length=120

 Score =  244 bits (623),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 119/120 (99%), Positives = 120/120 (100%), Gaps = 0/120 (0%)

Query  1    VRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60
            +RNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD
Sbjct  1    MRNVRLFRALLGVDKRTVIEDIEFEEDDAGDGARVIARVRPRSAVLRRCGRCGRKASWYD  60

Query  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120
            RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA
Sbjct  61   RGAGLRQWRSLDWGTVEVFLEAEAPRVNCPTHGPTVVAVPWARHHAGHTYAFDDTVAWLA  120


>gi|167969641|ref|ZP_02551918.1| transposase [Mycobacterium tuberculosis H37Ra]
Length=134

 Score =  240 bits (613),  Expect = 3e-61, Method: Compositional matrix adjust.
 Identities = 118/119 (99%), Positives = 118/119 (99%), Gaps = 0/119 (0%)

Query  326  PRLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAA  385
            P LYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAA
Sbjct  16   PVLYRAYLLKESLRHVFSVKGEEGKQALDRWISWAQRCRIPVFVELAARIKRHRVAIDAA  75

Query  386  LDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ  444
            LDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ
Sbjct  76   LDHGLSQGLIESTNTKIRLLTRIAFGFRSPQALIALAMLTLAGHRPTLPGRHNHPQISQ  134



Lambda     K      H
   0.324    0.136    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 915653111114


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40