BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv3801c

Length=637
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15610937|ref|NP_218318.1|  long-chain-fatty-acid--CoA ligase [...  1306    0.0   
gi|31794975|ref|NP_857468.1|  acyl-CoA synthetase [Mycobacterium ...  1305    0.0   
gi|289445402|ref|ZP_06435146.1|  fatty-acid-CoA ligase fadD32 [My...  1304    0.0   
gi|289747643|ref|ZP_06507021.1|  fatty-acid-CoA ligase fadD32 [My...  1304    0.0   
gi|167969913|ref|ZP_02552190.1|  acyl-CoA synthetase [Mycobacteri...  1289    0.0   
gi|339300206|gb|AEJ52316.1|  fatty-acid-CoA ligase fadD32 [Mycoba...  1288    0.0   
gi|15843423|ref|NP_338460.1|  long-chain-fatty-acid--CoA ligase [...  1286    0.0   
gi|294995284|ref|ZP_06800975.1|  long-chain-fatty-acid--CoA ligas...  1285    0.0   
gi|118620001|ref|YP_908333.1|  acyl-CoA synthetase [Mycobacterium...  1220    0.0   
gi|183985333|ref|YP_001853624.1|  fatty acyl-AMP ligase FadD32 [M...  1217    0.0   
gi|289759968|ref|ZP_06519346.1|  fatty-acid-CoA ligase fadD32 [My...  1209    0.0   
gi|15826935|ref|NP_301198.1|  long-chain-fatty-acid--CoA ligase [...  1203    0.0   
gi|240168576|ref|ZP_04747235.1|  acyl-CoA synthetase [Mycobacteri...  1199    0.0   
gi|254822506|ref|ZP_05227507.1|  long-chain-fatty-acid--CoA ligas...  1119    0.0   
gi|296166933|ref|ZP_06849350.1|  acyl-CoA synthetase [Mycobacteri...  1114    0.0   
gi|118464005|ref|YP_879511.1|  long-chain-fatty-acid--CoA ligase ...  1111    0.0   
gi|41406317|ref|NP_959153.1|  acyl-CoA synthetase [Mycobacterium ...  1108    0.0   
gi|342860060|ref|ZP_08716712.1|  long-chain-fatty-acid--CoA ligas...  1100    0.0   
gi|333992758|ref|YP_004525372.1|  fatty acyl-AMP ligase [Mycobact...  1019    0.0   
gi|126437955|ref|YP_001073646.1|  long-chain-fatty-acid--CoA liga...  1013    0.0   
gi|108801974|ref|YP_642171.1|  long-chain-fatty-acid--CoA ligase ...  1008    0.0   
gi|120406583|ref|YP_956412.1|  long-chain-fatty-acid--CoA ligase ...   995    0.0   
gi|118471852|ref|YP_890606.1|  long-chain-fatty-acid--CoA ligase ...   988    0.0   
gi|315446504|ref|YP_004079383.1|  acyl-CoA synthetase (AMP-formin...   987    0.0   
gi|145221760|ref|YP_001132438.1|  long-chain-fatty-acid--CoA liga...   987    0.0   
gi|169627284|ref|YP_001700933.1|  long-chain-fatty-acid--CoA liga...   863    0.0   
gi|256855995|emb|CBB12337.1|  FadD32 protein [Rhodococcus aetheri...   791    0.0   
gi|54022152|ref|YP_116394.1|  long-chain-fatty-acid--CoA ligase [...   767    0.0   
gi|226363352|ref|YP_002781134.1|  long-chain-fatty-acid--CoA liga...   765    0.0   
gi|111021047|ref|YP_704019.1|  long-chain-fatty-acid--CoA ligase ...   765    0.0   
gi|312137705|ref|YP_004005041.1|  acyl-CoA ligase/synthetase [Rho...   763    0.0   
gi|226303709|ref|YP_002763667.1|  long-chain fatty acyl-AMP ligas...   759    0.0   
gi|262200246|ref|YP_003271454.1|  AMP-dependent synthetase and li...   753    0.0   
gi|343926232|ref|ZP_08765741.1|  long-chain fatty acyl-AMP ligase...   749    0.0   
gi|333917786|ref|YP_004491367.1|  fatty-acid--CoA ligase [Amycoli...   744    0.0   
gi|326384299|ref|ZP_08205980.1|  long-chain-fatty-acid--CoA ligas...   731    0.0   
gi|296137924|ref|YP_003645167.1|  AMP-dependent synthetase and li...   719    0.0   
gi|296395147|ref|YP_003660031.1|  AMP-dependent synthetase and li...   692    0.0   
gi|339296608|gb|AEJ48719.1|  fatty-acid-CoA ligase fadD32 [Mycoba...   691    0.0   
gi|317509112|ref|ZP_07966739.1|  AMP-binding enzyme [Segniliparus...   689    0.0   
gi|319948776|ref|ZP_08022893.1|  long-chain-fatty-acid--CoA ligas...   672    0.0   
gi|169628267|ref|YP_001701916.1|  long-chain-fatty-acid--CoA liga...   632    6e-179
gi|118473450|ref|YP_888578.1|  fatty-acid--CoA ligase [Mycobacter...   620    3e-175
gi|169629003|ref|YP_001702652.1|  long-chain-fatty-acid--CoA liga...   616    3e-174
gi|120404573|ref|YP_954402.1|  putative fatty-acid--CoA ligase [M...   593    4e-167
gi|145223488|ref|YP_001134166.1|  putative fatty-acid--CoA ligase...   587    2e-165
gi|315443847|ref|YP_004076726.1|  acyl-CoA synthetase (AMP-formin...   586    4e-165
gi|169631529|ref|YP_001705178.1|  putative fatty-acid--CoA ligase...   579    5e-163
gi|118467833|ref|YP_889152.1|  fatty-acid--CoA ligase [Mycobacter...   574    2e-161
gi|40786988|gb|AAR89980.1|  FadD32 [Rhodococcus rhodochrous]           571    1e-160


>gi|15610937|ref|NP_218318.1| long-chain-fatty-acid--CoA ligase [Mycobacterium tuberculosis 
H37Rv]
 gi|148663669|ref|YP_001285192.1| acyl-CoA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148825008|ref|YP_001289762.1| acyl-CoA synthetase [Mycobacterium tuberculosis F11]
 16 more sequence titles
 Length=637

 Score = 1306 bits (3379),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 637/637 (100%), Positives = 637/637 (100%), Gaps = 0/637 (0%)

Query  1    MFVTGESGMAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVAR  60
            MFVTGESGMAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVAR
Sbjct  1    MFVTGESGMAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVAR  60

Query  61   DILWSDFSARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAE  120
            DILWSDFSARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAE
Sbjct  61   DILWSDFSARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAE  120

Query  121  PGHVGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQ  180
            PGHVGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQ
Sbjct  121  PGHVGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQ  180

Query  181  PEANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDM  240
            PEANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDM
Sbjct  181  PEANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDM  240

Query  241  GLITVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRG  300
            GLITVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRG
Sbjct  241  GLITVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRG  300

Query  301  VPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVS  360
            VPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVS
Sbjct  301  VPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVS  360

Query  361  TTPMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELP  420
            TTPMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELP
Sbjct  361  TTPMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELP  420

Query  421  DGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTY  480
            DGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTY
Sbjct  421  DGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTY  480

Query  481  FKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDD  540
            FKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDD
Sbjct  481  FKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDD  540

Query  541  SHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGT  600
            SHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGT
Sbjct  541  SHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGT  600

Query  601  IPRTSSGKIGRRACRAAYLDGSLRSGVGSPTVFATSD  637
            IPRTSSGKIGRRACRAAYLDGSLRSGVGSPTVFATSD
Sbjct  601  IPRTSSGKIGRRACRAAYLDGSLRSGVGSPTVFATSD  637


>gi|31794975|ref|NP_857468.1| acyl-CoA synthetase [Mycobacterium bovis AF2122/97]
 gi|121639718|ref|YP_979942.1| acyl-CoA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224992213|ref|YP_002646903.1| acyl-CoA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 19 more sequence titles
 Length=637

 Score = 1305 bits (3377),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 636/637 (99%), Positives = 636/637 (99%), Gaps = 0/637 (0%)

Query  1    MFVTGESGMAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVAR  60
            MFVTGESGMAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVAR
Sbjct  1    MFVTGESGMAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVAR  60

Query  61   DILWSDFSARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAE  120
            DILWSDFSARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAE
Sbjct  61   DILWSDFSARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAE  120

Query  121  PGHVGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQ  180
            PGHVGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQ
Sbjct  121  PGHVGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQ  180

Query  181  PEANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDM  240
            PEANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDM
Sbjct  181  PEANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDM  240

Query  241  GLITVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRG  300
            GLITVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRG
Sbjct  241  GLITVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRG  300

Query  301  VPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVS  360
            VPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVS
Sbjct  301  VPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVS  360

Query  361  TTPMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELP  420
            TTPMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELP
Sbjct  361  TTPMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELP  420

Query  421  DGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTY  480
            DGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTY
Sbjct  421  DGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTY  480

Query  481  FKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDD  540
            FKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGY AAFSVPANQLPQTVFDD
Sbjct  481  FKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYVAAFSVPANQLPQTVFDD  540

Query  541  SHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGT  600
            SHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGT
Sbjct  541  SHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGT  600

Query  601  IPRTSSGKIGRRACRAAYLDGSLRSGVGSPTVFATSD  637
            IPRTSSGKIGRRACRAAYLDGSLRSGVGSPTVFATSD
Sbjct  601  IPRTSSGKIGRRACRAAYLDGSLRSGVGSPTVFATSD  637


>gi|289445402|ref|ZP_06435146.1| fatty-acid-CoA ligase fadD32 [Mycobacterium tuberculosis CPHL_A]
 gi|289418360|gb|EFD15561.1| fatty-acid-CoA ligase fadD32 [Mycobacterium tuberculosis CPHL_A]
Length=637

 Score = 1304 bits (3375),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 635/637 (99%), Positives = 636/637 (99%), Gaps = 0/637 (0%)

Query  1    MFVTGESGMAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVAR  60
            MFVTGESGMAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVAR
Sbjct  1    MFVTGESGMAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVAR  60

Query  61   DILWSDFSARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAE  120
            DILWSDFSARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAE
Sbjct  61   DILWSDFSARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAE  120

Query  121  PGHVGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQ  180
            PGHVGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQ
Sbjct  121  PGHVGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQ  180

Query  181  PEANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDM  240
            PEANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDM
Sbjct  181  PEANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDM  240

Query  241  GLITVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRG  300
            GLITVLLASVLGHSFTFMTPAAFVRRPGRW+RELARKPGETGGTFSAAPNFAFEHAAVRG
Sbjct  241  GLITVLLASVLGHSFTFMTPAAFVRRPGRWVRELARKPGETGGTFSAAPNFAFEHAAVRG  300

Query  301  VPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVS  360
            VPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVS
Sbjct  301  VPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVS  360

Query  361  TTPMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELP  420
            TTPMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELP
Sbjct  361  TTPMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELP  420

Query  421  DGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTY  480
            DGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTY
Sbjct  421  DGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTY  480

Query  481  FKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDD  540
            FKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGY AAFSVPANQLPQTVFDD
Sbjct  481  FKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYVAAFSVPANQLPQTVFDD  540

Query  541  SHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGT  600
            SHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGT
Sbjct  541  SHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGT  600

Query  601  IPRTSSGKIGRRACRAAYLDGSLRSGVGSPTVFATSD  637
            IPRTSSGKIGRRACRAAYLDGSLRSGVGSPTVFATSD
Sbjct  601  IPRTSSGKIGRRACRAAYLDGSLRSGVGSPTVFATSD  637


>gi|289747643|ref|ZP_06507021.1| fatty-acid-CoA ligase fadD32 [Mycobacterium tuberculosis 02_1987]
 gi|298527276|ref|ZP_07014685.1| acyl-CoA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|289688171|gb|EFD55659.1| fatty-acid-CoA ligase fadD32 [Mycobacterium tuberculosis 02_1987]
 gi|298497070|gb|EFI32364.1| acyl-CoA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|326905639|gb|EGE52572.1| fatty-acid-CoA ligase fadD32 [Mycobacterium tuberculosis W-148]
Length=637

 Score = 1304 bits (3374),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 636/637 (99%), Positives = 636/637 (99%), Gaps = 0/637 (0%)

Query  1    MFVTGESGMAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVAR  60
            MFVTGESGMAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVAR
Sbjct  1    MFVTGESGMAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVAR  60

Query  61   DILWSDFSARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAE  120
            DILWSDFSARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAE
Sbjct  61   DILWSDFSARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAE  120

Query  121  PGHVGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQ  180
            PGHVGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQ
Sbjct  121  PGHVGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQ  180

Query  181  PEANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDM  240
            PEANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQE DRGVSWLPFFHDM
Sbjct  181  PEANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQESDRGVSWLPFFHDM  240

Query  241  GLITVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRG  300
            GLITVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRG
Sbjct  241  GLITVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRG  300

Query  301  VPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVS  360
            VPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVS
Sbjct  301  VPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVS  360

Query  361  TTPMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELP  420
            TTPMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELP
Sbjct  361  TTPMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELP  420

Query  421  DGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTY  480
            DGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTY
Sbjct  421  DGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTY  480

Query  481  FKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDD  540
            FKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDD
Sbjct  481  FKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDD  540

Query  541  SHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGT  600
            SHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGT
Sbjct  541  SHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGT  600

Query  601  IPRTSSGKIGRRACRAAYLDGSLRSGVGSPTVFATSD  637
            IPRTSSGKIGRRACRAAYLDGSLRSGVGSPTVFATSD
Sbjct  601  IPRTSSGKIGRRACRAAYLDGSLRSGVGSPTVFATSD  637


>gi|167969913|ref|ZP_02552190.1| acyl-CoA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|254552915|ref|ZP_05143362.1| long-chain-fatty-acid--CoA ligase [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|297636483|ref|ZP_06954263.1| long-chain-fatty-acid--CoA ligase [Mycobacterium tuberculosis 
KZN 4207]
 27 more sequence titles
 Length=629

 Score = 1289 bits (3336),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 629/629 (100%), Positives = 629/629 (100%), Gaps = 0/629 (0%)

Query  9    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  68
            MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS
Sbjct  1    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  60

Query  69   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  128
            ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH
Sbjct  61   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  120

Query  129  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  188
            AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV
Sbjct  121  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  180

Query  189  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  248
            AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA
Sbjct  181  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  240

Query  249  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP  308
            SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP
Sbjct  241  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP  300

Query  309  LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP  368
            LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP
Sbjct  301  LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP  360

Query  369  TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW  428
            TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW
Sbjct  361  TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW  420

Query  429  LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA  488
            LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA
Sbjct  421  LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA  480

Query  489  GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD  548
            GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD
Sbjct  481  GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD  540

Query  549  PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK  608
            PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK
Sbjct  541  PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK  600

Query  609  IGRRACRAAYLDGSLRSGVGSPTVFATSD  637
            IGRRACRAAYLDGSLRSGVGSPTVFATSD
Sbjct  601  IGRRACRAAYLDGSLRSGVGSPTVFATSD  629


>gi|339300206|gb|AEJ52316.1| fatty-acid-CoA ligase fadD32 [Mycobacterium tuberculosis CCDC5180]
Length=629

 Score = 1288 bits (3332),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 628/629 (99%), Positives = 628/629 (99%), Gaps = 0/629 (0%)

Query  9    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  68
            MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS
Sbjct  1    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  60

Query  69   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  128
            ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH
Sbjct  61   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  120

Query  129  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  188
            AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV
Sbjct  121  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  180

Query  189  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  248
            AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQE DRGVSWLPFFHDMGLITVLLA
Sbjct  181  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQESDRGVSWLPFFHDMGLITVLLA  240

Query  249  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP  308
            SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP
Sbjct  241  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP  300

Query  309  LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP  368
            LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP
Sbjct  301  LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP  360

Query  369  TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW  428
            TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW
Sbjct  361  TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW  420

Query  429  LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA  488
            LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA
Sbjct  421  LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA  480

Query  489  GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD  548
            GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD
Sbjct  481  GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD  540

Query  549  PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK  608
            PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK
Sbjct  541  PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK  600

Query  609  IGRRACRAAYLDGSLRSGVGSPTVFATSD  637
            IGRRACRAAYLDGSLRSGVGSPTVFATSD
Sbjct  601  IGRRACRAAYLDGSLRSGVGSPTVFATSD  629


>gi|15843423|ref|NP_338460.1| long-chain-fatty-acid--CoA ligase [Mycobacterium tuberculosis 
CDC1551]
 gi|13883791|gb|AAK48274.1| acyl-CoA synthase, putative [Mycobacterium tuberculosis CDC1551]
Length=629

 Score = 1286 bits (3329),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 628/629 (99%), Positives = 628/629 (99%), Gaps = 0/629 (0%)

Query  9    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  68
            MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS
Sbjct  1    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  60

Query  69   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  128
            ARNRAVGARLQQVTQPGDRVAI CPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH
Sbjct  61   ARNRAVGARLQQVTQPGDRVAIXCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  120

Query  129  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  188
            AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV
Sbjct  121  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  180

Query  189  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  248
            AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA
Sbjct  181  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  240

Query  249  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP  308
            SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP
Sbjct  241  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP  300

Query  309  LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP  368
            LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP
Sbjct  301  LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP  360

Query  369  TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW  428
            TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW
Sbjct  361  TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW  420

Query  429  LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA  488
            LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA
Sbjct  421  LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA  480

Query  489  GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD  548
            GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD
Sbjct  481  GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD  540

Query  549  PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK  608
            PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK
Sbjct  541  PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK  600

Query  609  IGRRACRAAYLDGSLRSGVGSPTVFATSD  637
            IGRRACRAAYLDGSLRSGVGSPTVFATSD
Sbjct  601  IGRRACRAAYLDGSLRSGVGSPTVFATSD  629


>gi|294995284|ref|ZP_06800975.1| long-chain-fatty-acid--CoA ligase [Mycobacterium tuberculosis 
210]
Length=629

 Score = 1285 bits (3324),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 627/629 (99%), Positives = 627/629 (99%), Gaps = 0/629 (0%)

Query  9    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  68
            MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS
Sbjct  1    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  60

Query  69   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  128
            ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH
Sbjct  61   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  120

Query  129  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  188
            AVLDDCAPSTILTTTDSAEGVRKFIRARS KERPRVIAVDAVPTEVAATWQQPEANEETV
Sbjct  121  AVLDDCAPSTILTTTDSAEGVRKFIRARSPKERPRVIAVDAVPTEVAATWQQPEANEETV  180

Query  189  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  248
            AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQE DRGVSWLPFFHDMGLITVLLA
Sbjct  181  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQESDRGVSWLPFFHDMGLITVLLA  240

Query  249  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP  308
            SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP
Sbjct  241  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP  300

Query  309  LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP  368
            LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP
Sbjct  301  LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP  360

Query  369  TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW  428
            TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW
Sbjct  361  TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW  420

Query  429  LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA  488
            LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA
Sbjct  421  LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA  480

Query  489  GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD  548
            GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD
Sbjct  481  GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD  540

Query  549  PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK  608
            PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK
Sbjct  541  PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK  600

Query  609  IGRRACRAAYLDGSLRSGVGSPTVFATSD  637
            IGRRACRAAYLDGSLRSGVGSPTVFATSD
Sbjct  601  IGRRACRAAYLDGSLRSGVGSPTVFATSD  629


>gi|118620001|ref|YP_908333.1| acyl-CoA synthetase [Mycobacterium ulcerans Agy99]
 gi|118572111|gb|ABL06862.1| fatty-acyl AMP ligase FadD32 [Mycobacterium ulcerans Agy99]
Length=635

 Score = 1220 bits (3156),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 589/633 (94%), Positives = 609/633 (97%), Gaps = 0/633 (0%)

Query  3    VTGESGMAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDI  62
            +TGE  MAYHNPFIVNGKIRFP NTNLVRHVEKWA+VRGDKLAYRFLDFSTERDGV RDI
Sbjct  1    MTGEGPMAYHNPFIVNGKIRFPENTNLVRHVEKWARVRGDKLAYRFLDFSTERDGVERDI  60

Query  63   LWSDFSARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPG  122
            LWS+FSARNRAVGARLQQVTQPGDR+AILCPQNLDYLISFFGALYSGRIAVPLFDPAEPG
Sbjct  61   LWSEFSARNRAVGARLQQVTQPGDRIAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPG  120

Query  123  HVGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPE  182
            HVGRLHAVLDDC PSTILT+TDSAEGVRKFIR+RSAK+RPRVIAVDAVPTEVA+TWQQPE
Sbjct  121  HVGRLHAVLDDCTPSTILTSTDSAEGVRKFIRSRSAKKRPRVIAVDAVPTEVASTWQQPE  180

Query  183  ANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGL  242
            ANE T AYLQYTSGSTR+PSGVQITHLNLPTNV+QVLNALEGQEGDRGVSWLPFFHDMGL
Sbjct  181  ANELTTAYLQYTSGSTRVPSGVQITHLNLPTNVLQVLNALEGQEGDRGVSWLPFFHDMGL  240

Query  243  ITVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVP  302
            ITVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAA+RGVP
Sbjct  241  ITVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAMRGVP  300

Query  303  RDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTT  362
            RDDEPPLDLSNVKGILNGSEPVSPASMRKFF+AF PYGL++TAVKPSYGLAEATLFVSTT
Sbjct  301  RDDEPPLDLSNVKGILNGSEPVSPASMRKFFKAFEPYGLRETAVKPSYGLAEATLFVSTT  360

Query  363  PMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDG  422
            PMDEVPTVIHVDRDELN QRFVEVAADAPNAVAQVSAGKVGV EWAVIVD +TASELPDG
Sbjct  361  PMDEVPTVIHVDRDELNKQRFVEVAADAPNAVAQVSAGKVGVDEWAVIVDTETASELPDG  420

Query  423  QIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFK  482
            QIGEIWLHGNNLG GYWGKEEESAQTF+NILKSR+ ES AEGAPDD LWVRTGDYGTYFK
Sbjct  421  QIGEIWLHGNNLGIGYWGKEEESAQTFRNILKSRVPESHAEGAPDDGLWVRTGDYGTYFK  480

Query  483  DHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSH  542
             HLYIAGRIKDLVIIDGRNHYPQDLE TAQESTKALRVGY AAFSVPANQLPQ VFDD H
Sbjct  481  GHLYIAGRIKDLVIIDGRNHYPQDLEYTAQESTKALRVGYVAAFSVPANQLPQKVFDDPH  540

Query  543  AGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIP  602
            AGL FDPEDTSEQLVIVGERAAGTHKL++QPI DDIRAAIAVGHGVTVRDVLLVSAGTIP
Sbjct  541  AGLSFDPEDTSEQLVIVGERAAGTHKLEYQPIADDIRAAIAVGHGVTVRDVLLVSAGTIP  600

Query  603  RTSSGKIGRRACRAAYLDGSLRSGVGSPTVFAT  635
            RTSSGKIGRRACR AY+DGSLRSGV SPTVFAT
Sbjct  601  RTSSGKIGRRACRTAYIDGSLRSGVSSPTVFAT  633


>gi|183985333|ref|YP_001853624.1| fatty acyl-AMP ligase FadD32 [Mycobacterium marinum M]
 gi|327488155|sp|B2HMK0.1|FAA32_MYCMM RecName: Full=Long-chain-fatty-acid--AMP ligase FadD32; Short=FAAL; 
AltName: Full=Acyl-AMP synthetase
 gi|183178659|gb|ACC43769.1| fatty acyl-AMP ligase FadD32 [Mycobacterium marinum M]
Length=629

 Score = 1217 bits (3150),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 588/627 (94%), Positives = 605/627 (97%), Gaps = 0/627 (0%)

Query  9    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  68
            MAYHNPFIVNGKIRFP NTNLVRHVEKWA+VRGDKLAYRFLDFSTERDGV RDILWS+FS
Sbjct  1    MAYHNPFIVNGKIRFPENTNLVRHVEKWARVRGDKLAYRFLDFSTERDGVERDILWSEFS  60

Query  69   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  128
            ARNRAVGARLQQVTQPGDR+AILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH
Sbjct  61   ARNRAVGARLQQVTQPGDRIAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  120

Query  129  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  188
            AVLDDC PSTILTTTDSAEGVRKFIR+RSAKERPRVIAVDAVPTEVA+TWQQPEANE T 
Sbjct  121  AVLDDCTPSTILTTTDSAEGVRKFIRSRSAKERPRVIAVDAVPTEVASTWQQPEANELTT  180

Query  189  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  248
            AYLQYTSGSTR+PSGVQITHLNLPTNV+QVLNALEGQEGDRGVSWLPFFHDMGLITVLLA
Sbjct  181  AYLQYTSGSTRVPSGVQITHLNLPTNVLQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  240

Query  249  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP  308
            SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAA+RGVPRDDEPP
Sbjct  241  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAMRGVPRDDEPP  300

Query  309  LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP  368
            LDLSNVKGILNGSEPVSPASMRKFF+AF PYGL++TAVKPSYGLAEATLFVSTTPMDEVP
Sbjct  301  LDLSNVKGILNGSEPVSPASMRKFFKAFEPYGLRETAVKPSYGLAEATLFVSTTPMDEVP  360

Query  369  TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW  428
            TVIHVDRDELN QRFVEVAADAPNAVAQVSAGKVGV EWAVIVD +TASELPDGQIGEIW
Sbjct  361  TVIHVDRDELNKQRFVEVAADAPNAVAQVSAGKVGVDEWAVIVDTETASELPDGQIGEIW  420

Query  429  LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA  488
            LHGNNLG GYWGKEEESAQTF+NILKSR+ ES AEGAPDD LWVRTGDYGTYFK HLYIA
Sbjct  421  LHGNNLGIGYWGKEEESAQTFRNILKSRVPESHAEGAPDDGLWVRTGDYGTYFKGHLYIA  480

Query  489  GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD  548
            GRIKDLVIIDGRNHYPQDLE TAQESTKALRVGY AAFSVPANQLPQ VFDD HAGL FD
Sbjct  481  GRIKDLVIIDGRNHYPQDLEYTAQESTKALRVGYVAAFSVPANQLPQKVFDDPHAGLSFD  540

Query  549  PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK  608
            PEDTSEQLVIVGERAAGTHKL++QPI DDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK
Sbjct  541  PEDTSEQLVIVGERAAGTHKLEYQPIADDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK  600

Query  609  IGRRACRAAYLDGSLRSGVGSPTVFAT  635
            IGRRACR AY+DGSLRSGV SPTVFAT
Sbjct  601  IGRRACRTAYIDGSLRSGVSSPTVFAT  627


>gi|289759968|ref|ZP_06519346.1| fatty-acid-CoA ligase fadD32 [Mycobacterium tuberculosis T85]
 gi|289715532|gb|EFD79544.1| fatty-acid-CoA ligase fadD32 [Mycobacterium tuberculosis T85]
Length=637

 Score = 1209 bits (3127),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 598/609 (99%), Positives = 598/609 (99%), Gaps = 3/609 (0%)

Query  9    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  68
            MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS
Sbjct  1    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  60

Query  69   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  128
            ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH
Sbjct  61   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  120

Query  129  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  188
            AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV
Sbjct  121  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  180

Query  189  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  248
            AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQE DRGVSWLPFFHDMGLITVLLA
Sbjct  181  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQESDRGVSWLPFFHDMGLITVLLA  240

Query  249  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP  308
            SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP
Sbjct  241  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP  300

Query  309  LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP  368
            LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP
Sbjct  301  LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP  360

Query  369  TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW  428
            TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW
Sbjct  361  TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW  420

Query  429  LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA  488
            LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA
Sbjct  421  LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA  480

Query  489  GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD  548
            GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD
Sbjct  481  GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD  540

Query  549  PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRT-SSG  607
            PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSA    R  SSG
Sbjct  541  PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSARHDFREPSSG  600

Query  608  KIG--RRAC  614
            KIG  R  C
Sbjct  601  KIGPPRLPC  609


>gi|15826935|ref|NP_301198.1| long-chain-fatty-acid--CoA ligase [Mycobacterium leprae TN]
 gi|221229413|ref|YP_002502829.1| long-chain-fatty-acid--CoA ligase [Mycobacterium leprae Br4923]
 gi|13092482|emb|CAC29608.1| putative acyl-CoA synthetase [Mycobacterium leprae]
 gi|219932520|emb|CAR70193.1| putative acyl-CoA synthetase [Mycobacterium leprae Br4923]
Length=635

 Score = 1203 bits (3112),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 588/632 (94%), Positives = 601/632 (96%), Gaps = 0/632 (0%)

Query  3    VTGESGMAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDI  62
            +TGE  MAYHNPFIVNGKIRFP NTNLVRHVEKWAKVRGDKLAYRFLDFST RDGVARDI
Sbjct  1    MTGEGRMAYHNPFIVNGKIRFPPNTNLVRHVEKWAKVRGDKLAYRFLDFSTGRDGVARDI  60

Query  63   LWSDFSARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPG  122
            LWS+FSARNRAVGARLQQVTQPGDR+AILCPQNLDYLISFFGALYSGRIAVPLFDPAEPG
Sbjct  61   LWSEFSARNRAVGARLQQVTQPGDRIAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPG  120

Query  123  HVGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPE  182
            HVGRLHAVLDDC PSTILTTTDSAEGVRKFIR R AKER RVIAVDAVP EVAATWQQPE
Sbjct  121  HVGRLHAVLDDCTPSTILTTTDSAEGVRKFIRGRFAKERTRVIAVDAVPNEVAATWQQPE  180

Query  183  ANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGL  242
            ANEETVAYLQYTSGSTRIPSGVQITHLNLPTNV+QVLN+L+GQEGDRGVSWLPFFHDMGL
Sbjct  181  ANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVLQVLNSLQGQEGDRGVSWLPFFHDMGL  240

Query  243  ITVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVP  302
            ITVLL SVLGHSFTFMTPAAFVRRPGRWIRELARKP +TGGTFSAAPNFAFEHAA+RG+P
Sbjct  241  ITVLLPSVLGHSFTFMTPAAFVRRPGRWIRELARKPEDTGGTFSAAPNFAFEHAAMRGLP  300

Query  303  RDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTT  362
            RDDE PLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTT
Sbjct  301  RDDELPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTT  360

Query  363  PMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDG  422
            PMDE PTVIHVDR ELNNQRFVEV ADAPNAVAQVSAGKVGVSEWA+IVDADTASELPDG
Sbjct  361  PMDESPTVIHVDRYELNNQRFVEVPADAPNAVAQVSAGKVGVSEWAIIVDADTASELPDG  420

Query  423  QIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFK  482
            QIGEIWLHGNNLGTGYWGKEEESAQTF NILKSRISESRAEGA DDA WVRTGDYGTYFK
Sbjct  421  QIGEIWLHGNNLGTGYWGKEEESAQTFNNILKSRISESRAEGASDDASWVRTGDYGTYFK  480

Query  483  DHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSH  542
            DHLYIAGRIKDLVIIDGRNHYPQDLE TAQESTKALRVGY AAFSVPANQL Q V +D H
Sbjct  481  DHLYIAGRIKDLVIIDGRNHYPQDLEYTAQESTKALRVGYVAAFSVPANQLAQVVLEDPH  540

Query  543  AGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIP  602
             GLKFD EDTSEQLVIVGERAAGTHKLD+QPIVDDIRAAIAV HGV VRDVLLV AGTIP
Sbjct  541  VGLKFDAEDTSEQLVIVGERAAGTHKLDYQPIVDDIRAAIAVRHGVAVRDVLLVPAGTIP  600

Query  603  RTSSGKIGRRACRAAYLDGSLRSGVGSPTVFA  634
            RTSSGKIGRRACRAAY+DGSLRSG  SPTVFA
Sbjct  601  RTSSGKIGRRACRAAYIDGSLRSGASSPTVFA  632


>gi|240168576|ref|ZP_04747235.1| acyl-CoA synthetase [Mycobacterium kansasii ATCC 12478]
Length=629

 Score = 1199 bits (3101),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 580/627 (93%), Positives = 598/627 (96%), Gaps = 0/627 (0%)

Query  9    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  68
            MAYHNPFIVNG+IRFP NTNLVRHVEKWAKVRGDKLAYRFLDFSTERDG+ RDILWS+FS
Sbjct  1    MAYHNPFIVNGRIRFPENTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGIERDILWSEFS  60

Query  69   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  128
            ARNRAVGARLQQVTQPGDR+AILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH
Sbjct  61   ARNRAVGARLQQVTQPGDRIAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  120

Query  129  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  188
            AVLDDC PSTILTT+DSAEGVRKFIR+RSAKERPRVIAVDAVPTEVAATWQ+P+ANE T 
Sbjct  121  AVLDDCTPSTILTTSDSAEGVRKFIRSRSAKERPRVIAVDAVPTEVAATWQEPDANESTT  180

Query  189  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  248
            AYLQYTSGSTR P+GVQITHLNLPTNV+QVLNALEGQEGDRGVSWLPFFHDMGLITVLL 
Sbjct  181  AYLQYTSGSTRTPTGVQITHLNLPTNVLQVLNALEGQEGDRGVSWLPFFHDMGLITVLLT  240

Query  249  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP  308
            SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRG+PRDDEPP
Sbjct  241  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGLPRDDEPP  300

Query  309  LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP  368
            LDLSNVKGILNGSEPVSPASMRKFF AFAPYGL +TAVKPSYGLAEATLFVSTT  +E P
Sbjct  301  LDLSNVKGILNGSEPVSPASMRKFFNAFAPYGLPETAVKPSYGLAEATLFVSTTAPNEPP  360

Query  369  TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW  428
            TVIHVDRDELN QRFVEV AD+PNAVAQVSAGKVGV EWAVIVD DTASELPDGQIGEIW
Sbjct  361  TVIHVDRDELNKQRFVEVPADSPNAVAQVSAGKVGVDEWAVIVDPDTASELPDGQIGEIW  420

Query  429  LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA  488
            LHGNNLG GYWGKEEESAQ F+NILKSRISES AEGAPDD LWVRTGDYGTYFK HLYIA
Sbjct  421  LHGNNLGIGYWGKEEESAQIFRNILKSRISESHAEGAPDDGLWVRTGDYGTYFKGHLYIA  480

Query  489  GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD  548
            GRIKDLVIIDGRNHYPQDLE TAQES KALRVGY AAFSVPANQLPQ VFDD HAGLKFD
Sbjct  481  GRIKDLVIIDGRNHYPQDLEFTAQESNKALRVGYVAAFSVPANQLPQKVFDDPHAGLKFD  540

Query  549  PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK  608
            PEDTSEQLVIV ERAAGTHKL++QPI DDIRAAIAVGHGVTVRD+LLVSAGTIPRTSSGK
Sbjct  541  PEDTSEQLVIVAERAAGTHKLEYQPIADDIRAAIAVGHGVTVRDLLLVSAGTIPRTSSGK  600

Query  609  IGRRACRAAYLDGSLRSGVGSPTVFAT  635
            IGRRACRAAYLDGSLRSGVGSPT FAT
Sbjct  601  IGRRACRAAYLDGSLRSGVGSPTAFAT  627


>gi|254822506|ref|ZP_05227507.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare 
ATCC 13950]
Length=632

 Score = 1119 bits (2894),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 528/630 (84%), Positives = 584/630 (93%), Gaps = 2/630 (0%)

Query  9    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  68
            MAYHNPFIVNGKI+FP NTNLV+HVEKWA+VRGDKLAYRF+DFSTERDG  RDI+WSDFS
Sbjct  1    MAYHNPFIVNGKIKFPDNTNLVKHVEKWARVRGDKLAYRFVDFSTERDGEYRDIVWSDFS  60

Query  69   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  128
            ARNRAVGARLQQVTQPGDR+A+LCPQNLDYLI+FFGALY+GRIAVPLFDPAEPGHVGRLH
Sbjct  61   ARNRAVGARLQQVTQPGDRIAVLCPQNLDYLIAFFGALYAGRIAVPLFDPAEPGHVGRLH  120

Query  129  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  188
            AVLDDC+PSTILTTTD+AEGVRKFIRARSAKERPRVIAVDAVP EVA+TW+ PEA+E T+
Sbjct  121  AVLDDCSPSTILTTTDAAEGVRKFIRARSAKERPRVIAVDAVPNEVASTWEPPEADENTI  180

Query  189  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  248
            AYLQYTSGSTR P+GVQITHLNLPTNV+QVLN LEG+EGDRG+SWLPFFHDMGLIT LL+
Sbjct  181  AYLQYTSGSTRTPTGVQITHLNLPTNVLQVLNGLEGKEGDRGLSWLPFFHDMGLITALLS  240

Query  249  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGT--FSAAPNFAFEHAAVRGVPRDDE  306
             VLGH+FTFMTPAAFVRRPGRWIRE+ARKP +   +  F+ APNFAFEHAAVRGVP++ E
Sbjct  241  PVLGHNFTFMTPAAFVRRPGRWIREMARKPEDAPDSEVFTVAPNFAFEHAAVRGVPKEGE  300

Query  307  PPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDE  366
            PPLDLSNVK ILNGSEPVSPASMRKF+EAF+PYGL++TA+KPSYGLAEATLFVSTTPMD+
Sbjct  301  PPLDLSNVKAILNGSEPVSPASMRKFYEAFSPYGLRETAIKPSYGLAEATLFVSTTPMDQ  360

Query  367  VPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGE  426
             PTVIHVDRDELN QRFVEV AD+P AV QVSAG +GV EWAVIVD +TASELPDGQIGE
Sbjct  361  APTVIHVDRDELNKQRFVEVPADSPKAVPQVSAGTIGVDEWAVIVDPETASELPDGQIGE  420

Query  427  IWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLY  486
            IWLHGNNLGTGYWG+E+E+   F+NILKSRIS+S AEGAPDD +WV+TGDYGTY+K HLY
Sbjct  421  IWLHGNNLGTGYWGREQETNDIFRNILKSRISQSHAEGAPDDGMWVKTGDYGTYYKGHLY  480

Query  487  IAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLK  546
            IAGRIKDLVIIDGRNHYPQDLE +AQE++KALR GY AAFSVPANQLP+ VFD+ H GLK
Sbjct  481  IAGRIKDLVIIDGRNHYPQDLEYSAQEASKALRTGYVAAFSVPANQLPKEVFDNPHTGLK  540

Query  547  FDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSS  606
            +DP+D+SEQLVIV ERAAG+HKLD+QPI DDIRAAIAV HGVTVRD+LLV +GTIPRTSS
Sbjct  541  YDPDDSSEQLVIVAERAAGSHKLDYQPIADDIRAAIAVRHGVTVRDLLLVQSGTIPRTSS  600

Query  607  GKIGRRACRAAYLDGSLRSGVGSPTVFATS  636
            GKIG RACRAAYLDGSLRSGVGSPT FA S
Sbjct  601  GKIGHRACRAAYLDGSLRSGVGSPTAFANS  630


>gi|296166933|ref|ZP_06849350.1| acyl-CoA synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897810|gb|EFG77399.1| acyl-CoA synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=632

 Score = 1114 bits (2882),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 532/630 (85%), Positives = 579/630 (92%), Gaps = 2/630 (0%)

Query  9    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  68
            M YHNPFIVNGKIRFP NTNLV+HVEKWA+VRGDKLAYRF+D+STERDGV RDI+W DFS
Sbjct  1    MPYHNPFIVNGKIRFPDNTNLVKHVEKWARVRGDKLAYRFIDYSTERDGVYRDIVWRDFS  60

Query  69   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  128
            ARNRAVGARLQQVTQPGDR+AILCPQNLDYLI+FFGALY+GRIAVPLFDP EPGHVGRLH
Sbjct  61   ARNRAVGARLQQVTQPGDRIAILCPQNLDYLIAFFGALYAGRIAVPLFDPGEPGHVGRLH  120

Query  129  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  188
            AVLDDC PSTILTTT++AEGVRKFIRARSA ERPRVIAVDAVPTEVA+TW +PEA+E T+
Sbjct  121  AVLDDCTPSTILTTTEAAEGVRKFIRARSANERPRVIAVDAVPTEVASTWVEPEADENTI  180

Query  189  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  248
            AYLQYTSGSTR P+GV I+HLNLPTNV+QVLN LEG+EGDRG+SWLPFFHDMGLIT LL+
Sbjct  181  AYLQYTSGSTRTPTGVMISHLNLPTNVLQVLNGLEGKEGDRGLSWLPFFHDMGLITALLS  240

Query  249  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGT--FSAAPNFAFEHAAVRGVPRDDE  306
             VLGH+FTFMTPAAFVRRPGRWIRE+ARKP +  G+  F+ APNFAFEHAAVRGVP++ E
Sbjct  241  PVLGHNFTFMTPAAFVRRPGRWIREMARKPDDEPGSELFTVAPNFAFEHAAVRGVPKEGE  300

Query  307  PPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDE  366
            PPLDLSNVKGILNGSEPVSPASMRKF+EAFAPYGL++TAVKPSYGLAEATLFVSTTPMDE
Sbjct  301  PPLDLSNVKGILNGSEPVSPASMRKFYEAFAPYGLRETAVKPSYGLAEATLFVSTTPMDE  360

Query  367  VPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGE  426
             PTVIHVDRDELN QRFVEV ADAPNAVAQVSAG +GV EWAVIVD DTA+ELPD QIGE
Sbjct  361  APTVIHVDRDELNKQRFVEVPADAPNAVAQVSAGVIGVDEWAVIVDPDTATELPDDQIGE  420

Query  427  IWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLY  486
            IWLHG NLG GYWGKE E+ +TFKNILKSRIS+S AEGA DD LWVRTGDYGTY   HLY
Sbjct  421  IWLHGKNLGLGYWGKEAETQETFKNILKSRISKSHAEGAEDDGLWVRTGDYGTYHNGHLY  480

Query  487  IAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLK  546
            IAGRIKDLVIIDGRNHYPQDLE +AQE+++ALR GY AAFSVPAN+LPQ VFD+ H GLK
Sbjct  481  IAGRIKDLVIIDGRNHYPQDLEYSAQEASRALRTGYVAAFSVPANELPQVVFDNPHTGLK  540

Query  547  FDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSS  606
             DPED+SEQLVIV ERA GTHKLD+QPI D+IRAAIAV HGVT+RD+LLV AGTIPRTSS
Sbjct  541  HDPEDSSEQLVIVAERAPGTHKLDYQPIADEIRAAIAVRHGVTIRDLLLVQAGTIPRTSS  600

Query  607  GKIGRRACRAAYLDGSLRSGVGSPTVFATS  636
            GKIGRRACRAAYLDGSLRSGVGSPT FA+S
Sbjct  601  GKIGRRACRAAYLDGSLRSGVGSPTAFASS  630


>gi|118464005|ref|YP_879511.1| long-chain-fatty-acid--CoA ligase [Mycobacterium avium 104]
 gi|254773275|ref|ZP_05214791.1| long-chain-fatty-acid--CoA ligase [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|118165292|gb|ABK66189.1| acyl-CoA synthase [Mycobacterium avium 104]
Length=632

 Score = 1111 bits (2874),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 526/630 (84%), Positives = 579/630 (92%), Gaps = 2/630 (0%)

Query  9    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  68
            MAYHNPFIVNGKI+FP NTNLV+HVEKWA+VRGDKLAYRFLDFSTERDGVA DI WS+FS
Sbjct  1    MAYHNPFIVNGKIKFPENTNLVKHVEKWARVRGDKLAYRFLDFSTERDGVACDISWSEFS  60

Query  69   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  128
            ARNRAVGARLQQVT+PGDR+A+LCPQNLDYLI+ FGALY+GRIAVPLFDP+EPGHVGRLH
Sbjct  61   ARNRAVGARLQQVTEPGDRIAVLCPQNLDYLIALFGALYAGRIAVPLFDPSEPGHVGRLH  120

Query  129  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  188
            AVLDDC PSTILTTT++AEGVRKFIRARSAKERPRVIAVDAVP EV +TW  PEA+E T+
Sbjct  121  AVLDDCTPSTILTTTEAAEGVRKFIRARSAKERPRVIAVDAVPNEVNSTWVPPEADENTI  180

Query  189  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  248
            AYLQYTSGSTR P+GV+ITHLNLPTNV+QVLN LEG+EGDRG+SWLPFFHDMGLIT +L+
Sbjct  181  AYLQYTSGSTRTPTGVEITHLNLPTNVLQVLNGLEGKEGDRGLSWLPFFHDMGLITAMLS  240

Query  249  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGT--FSAAPNFAFEHAAVRGVPRDDE  306
             VLGH+FTFMTPAAFVRRPGRWIRE+ARKP +      F+ APNFAFEHAAVRGVP++ E
Sbjct  241  PVLGHNFTFMTPAAFVRRPGRWIREMARKPDDAPDCEVFTVAPNFAFEHAAVRGVPKEGE  300

Query  307  PPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDE  366
            PPLDLSNVKGILNGSEPVSP+SMRKF+EAF PYGL++TA+KPSYGLAEATLFVSTTPMD+
Sbjct  301  PPLDLSNVKGILNGSEPVSPSSMRKFYEAFKPYGLRETAIKPSYGLAEATLFVSTTPMDQ  360

Query  367  VPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGE  426
             PTVIHVDR ELN QRFVEV ADAPNAVAQVSAG +GV EWAVIVD +TASELPDG IGE
Sbjct  361  APTVIHVDRAELNKQRFVEVPADAPNAVAQVSAGVIGVDEWAVIVDPETASELPDGHIGE  420

Query  427  IWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLY  486
            IWLHGNN+G GYWGKEEE+ + F+NILKSRIS+S AEGAPDDA+WV+TGDYGTY+K HLY
Sbjct  421  IWLHGNNMGIGYWGKEEETNEVFRNILKSRISQSHAEGAPDDAMWVKTGDYGTYYKGHLY  480

Query  487  IAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLK  546
            IAGRIKDLVIIDGRNHYPQDLE +AQE++KALR GY AAFSVPANQLP+ VFD+ H GLK
Sbjct  481  IAGRIKDLVIIDGRNHYPQDLEYSAQEASKALRTGYVAAFSVPANQLPKEVFDNPHTGLK  540

Query  547  FDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSS  606
            +DP+DTSEQLVIV ERA GTHKLD+QPI DDIRAAIAV HGVTVRD+LLV AGTIPRTSS
Sbjct  541  YDPDDTSEQLVIVAERAPGTHKLDYQPIADDIRAAIAVRHGVTVRDLLLVQAGTIPRTSS  600

Query  607  GKIGRRACRAAYLDGSLRSGVGSPTVFATS  636
            GKIG RACRAAYLDGSLRSGVGSPT FA S
Sbjct  601  GKIGHRACRAAYLDGSLRSGVGSPTAFANS  630


>gi|41406317|ref|NP_959153.1| acyl-CoA synthetase [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41394665|gb|AAS02536.1| FadD32 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|336461569|gb|EGO40435.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium 
avium subsp. paratuberculosis S397]
Length=632

 Score = 1108 bits (2866),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 524/630 (84%), Positives = 578/630 (92%), Gaps = 2/630 (0%)

Query  9    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  68
            MAYHNPFI NGKI+FP NTNLV+HVEKWA+VRGDKLAYRFLDFSTERDGVA DI WS+FS
Sbjct  1    MAYHNPFIANGKIKFPENTNLVKHVEKWARVRGDKLAYRFLDFSTERDGVACDISWSEFS  60

Query  69   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  128
            ARNRAVGARLQQVT+PGDR+A+LCPQNLDYLI+ FGALY+GRIAVPLFDP+EPGHVGRLH
Sbjct  61   ARNRAVGARLQQVTEPGDRIAVLCPQNLDYLIALFGALYAGRIAVPLFDPSEPGHVGRLH  120

Query  129  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  188
            AVLDDC PSTILTTT++AEGVR+FIRARSAKERPRVIAVDAVP EV +TW  PEA+E T+
Sbjct  121  AVLDDCTPSTILTTTEAAEGVREFIRARSAKERPRVIAVDAVPNEVNSTWVPPEADENTI  180

Query  189  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  248
            AYLQYTSGSTR P+GV+ITHLNLPTNV+QVLN LEG+EGDRG+SWLPFFHDMGLIT +L+
Sbjct  181  AYLQYTSGSTRTPTGVEITHLNLPTNVLQVLNGLEGKEGDRGLSWLPFFHDMGLITAMLS  240

Query  249  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGT--FSAAPNFAFEHAAVRGVPRDDE  306
             VLGH+FTFMTPAAFVRRPGRWIRE+ARKP +      F+ APNFAFEHAAVRGVP++ E
Sbjct  241  PVLGHNFTFMTPAAFVRRPGRWIREMARKPDDAPDCEVFTVAPNFAFEHAAVRGVPKEGE  300

Query  307  PPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDE  366
            PPLDLSNVKGILNGSEPVSP+SMRKF+EAF PYGL++TA+KPSYGLAEATLFVSTTPMD+
Sbjct  301  PPLDLSNVKGILNGSEPVSPSSMRKFYEAFKPYGLRETAIKPSYGLAEATLFVSTTPMDQ  360

Query  367  VPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGE  426
             PTVIHVDR ELN QRFVEV ADAPNAVAQVSAG +GV EWAVIVD +TASELPDG IGE
Sbjct  361  APTVIHVDRAELNKQRFVEVPADAPNAVAQVSAGVIGVDEWAVIVDPETASELPDGHIGE  420

Query  427  IWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLY  486
            IWLHGNN+G GYWGKEEE+ + F+NILKSRIS+S AEGAPDDA+WV+TGDYGTY+K HLY
Sbjct  421  IWLHGNNMGIGYWGKEEETNEVFRNILKSRISQSHAEGAPDDAMWVKTGDYGTYYKGHLY  480

Query  487  IAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLK  546
            IAGRIKDLVIIDGRNHYPQDLE +AQE++KALR GY AAFSVPANQLP+ VFD+ H GLK
Sbjct  481  IAGRIKDLVIIDGRNHYPQDLEYSAQEASKALRTGYVAAFSVPANQLPKEVFDNPHTGLK  540

Query  547  FDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSS  606
            +DP+DTSEQLVIV ERA GTHKLD+QPI DDIRAAIAV HGVTVRD+LLV AGTIPRTSS
Sbjct  541  YDPDDTSEQLVIVAERAPGTHKLDYQPIADDIRAAIAVRHGVTVRDLLLVQAGTIPRTSS  600

Query  607  GKIGRRACRAAYLDGSLRSGVGSPTVFATS  636
            GKIG RACRAAYLDGSLRSGVGSPT FA S
Sbjct  601  GKIGHRACRAAYLDGSLRSGVGSPTAFANS  630


>gi|342860060|ref|ZP_08716712.1| long-chain-fatty-acid--CoA ligase [Mycobacterium colombiense 
CECT 3035]
 gi|342132438|gb|EGT85667.1| long-chain-fatty-acid--CoA ligase [Mycobacterium colombiense 
CECT 3035]
Length=632

 Score = 1100 bits (2845),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 521/630 (83%), Positives = 574/630 (92%), Gaps = 2/630 (0%)

Query  9    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  68
            M YHNPFIVNGKI+FP NTNLV+HVEKWAKVRGDKLAYRFLDFSTERDGVA DI WS+FS
Sbjct  1    MVYHNPFIVNGKIKFPDNTNLVKHVEKWAKVRGDKLAYRFLDFSTERDGVACDISWSEFS  60

Query  69   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  128
            ARNRAVGARLQQVTQP DR+A+LCPQNL+YL++ FGALY+GRIAVPLFDP+EPGHVGRLH
Sbjct  61   ARNRAVGARLQQVTQPEDRIAVLCPQNLNYLVALFGALYAGRIAVPLFDPSEPGHVGRLH  120

Query  129  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  188
            AVLDDC PSTILTTT++AEGVRKFIRARSAKERPRVIAVDAVP EVA+TW+ PEA E T+
Sbjct  121  AVLDDCTPSTILTTTEAAEGVRKFIRARSAKERPRVIAVDAVPNEVASTWEPPEATENTI  180

Query  189  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  248
            AYLQYTSGSTR P+GV ITHLNLPTNV+QVLN LEG+E DRG+SWLPFFHDMGLIT LL+
Sbjct  181  AYLQYTSGSTRTPTGVAITHLNLPTNVLQVLNGLEGKEADRGLSWLPFFHDMGLITALLS  240

Query  249  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGT--FSAAPNFAFEHAAVRGVPRDDE  306
             V+GH+FTFMTPAAFVRRPGRWIRE+ARKP +       + APNFAFEHAAVRGVP++ E
Sbjct  241  PVIGHNFTFMTPAAFVRRPGRWIREMARKPEDAPDCEVITVAPNFAFEHAAVRGVPKEGE  300

Query  307  PPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDE  366
            PPLDLSNVK ILNGSEPVSPASMRKF+EAF+PYGL++TA+KPSYGLAEATLFVSTTPMDE
Sbjct  301  PPLDLSNVKAILNGSEPVSPASMRKFYEAFSPYGLRETAIKPSYGLAEATLFVSTTPMDE  360

Query  367  VPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGE  426
             PTVIHVDRDELN QRFVEV AD+P AV QVSAG +GV EWAVIVD +TASELPDGQIGE
Sbjct  361  APTVIHVDRDELNKQRFVEVPADSPKAVPQVSAGIIGVDEWAVIVDPETASELPDGQIGE  420

Query  427  IWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLY  486
            IWLHGNNLG GYWGKEEE+   F+NILKSRIS+S AEGAPDD +WV+TGDYGTY K HLY
Sbjct  421  IWLHGNNLGIGYWGKEEETNDVFRNILKSRISQSHAEGAPDDGMWVKTGDYGTYHKGHLY  480

Query  487  IAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLK  546
            IAGRIKDLVIIDGRNHYPQDLE +AQE++KALR GY AAFSVPANQLP+ VFD+ HAG+K
Sbjct  481  IAGRIKDLVIIDGRNHYPQDLEYSAQEASKALRTGYVAAFSVPANQLPKEVFDNPHAGIK  540

Query  547  FDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSS  606
            +DP+D SEQLVIV ERAAG+HKLD+QPI DDIRAAIAV HGVTVRD+LLV +GTIPRTSS
Sbjct  541  YDPDDASEQLVIVAERAAGSHKLDYQPIADDIRAAIAVRHGVTVRDLLLVQSGTIPRTSS  600

Query  607  GKIGRRACRAAYLDGSLRSGVGSPTVFATS  636
            GKIG RACRAAYLDGSLRSGVGSPT FA+S
Sbjct  601  GKIGHRACRAAYLDGSLRSGVGSPTAFASS  630


>gi|333992758|ref|YP_004525372.1| fatty acyl-AMP ligase [Mycobacterium sp. JDM601]
 gi|333488726|gb|AEF38118.1| fatty acyl-AMP ligase FadD32 [Mycobacterium sp. JDM601]
Length=637

 Score = 1019 bits (2636),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 478/625 (77%), Positives = 546/625 (88%), Gaps = 1/625 (0%)

Query  10   AYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSA  69
            +YHNPF+ +GKIRFP N NLV+ VE+WA +RGDKLAYRFLD+STERDGVARDI W+DF A
Sbjct  9    SYHNPFVKDGKIRFPDNANLVKTVERWAALRGDKLAYRFLDYSTERDGVARDISWADFGA  68

Query  70   RNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHA  129
            RNRAV ARLQQVTQPGDRVAILCPQNLDYL+SFFG +YSGRIAVPLFDP EPGHVGRLHA
Sbjct  69   RNRAVAARLQQVTQPGDRVAILCPQNLDYLVSFFGIMYSGRIAVPLFDPGEPGHVGRLHA  128

Query  130  VLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETVA  189
            VLDDC PS +LTTTDSAEGVRKF R+R A  RPRVIAVDAVP EV +TW  PEA+ + +A
Sbjct  129  VLDDCTPSAVLTTTDSAEGVRKFFRSRPANARPRVIAVDAVPAEVGSTWVMPEADRDAIA  188

Query  190  YLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLAS  249
            YLQYTSGSTR P+GV+ITHLNLPTNVVQ+L++L+G+EGDRGV+WLPFFHDMGL+T+LL+ 
Sbjct  189  YLQYTSGSTRTPTGVKITHLNLPTNVVQLLDSLKGREGDRGVTWLPFFHDMGLVTILLSC  248

Query  250  VLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPL  309
            VLG  FTFMTPAAFVRRP RWI+E++RK GETG  FS APNFAFEHAA RG+P++ +PPL
Sbjct  249  VLGQQFTFMTPAAFVRRPYRWIKEMSRKEGETGECFSVAPNFAFEHAAARGLPKEGDPPL  308

Query  310  DLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPT  369
            DLSNV+ ILNGSEPVS AS+RKF EAFAP+G ++ A+KPSYGLAEATLFVSTTP DE P 
Sbjct  309  DLSNVRAILNGSEPVSAASVRKFNEAFAPFGFREEAIKPSYGLAEATLFVSTTPPDEGPR  368

Query  370  VIHVDRDELNN-QRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW  428
            +I+VDR+ELNN  RFVEV ADAPNAV+Q SAG+V V +WAVIVD +T +ELPDGQIGEIW
Sbjct  369  IIYVDREELNNGNRFVEVPADAPNAVSQASAGRVSVDQWAVIVDYETGAELPDGQIGEIW  428

Query  429  LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA  488
            L GNN+G GYW +++ESA TFKN+LKSR S SRAEG+ +D  WVRTGDYG YF D LYI 
Sbjct  429  LQGNNMGVGYWNRDKESADTFKNVLKSRTSPSRAEGSDEDGFWVRTGDYGAYFDDDLYIT  488

Query  489  GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD  548
            GR+KDLVI+DGRNHYPQDLE +AQE+++ALR GY AAFSVPANQLPQ  FD+ H+GLKFD
Sbjct  489  GRVKDLVIVDGRNHYPQDLEYSAQEASRALRAGYVAAFSVPANQLPQAAFDNPHSGLKFD  548

Query  549  PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK  608
            PED+SEQLVIV ERA G HKL++QPI DDIRAAIAV HGVTVRDVLLVSAGT+PRTSSGK
Sbjct  549  PEDSSEQLVIVAERAPGAHKLEYQPIADDIRAAIAVRHGVTVRDVLLVSAGTVPRTSSGK  608

Query  609  IGRRACRAAYLDGSLRSGVGSPTVF  633
            IGRRACRAAYLDGSLR G   P  +
Sbjct  609  IGRRACRAAYLDGSLRGGTTGPNAY  633


>gi|126437955|ref|YP_001073646.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. JLS]
 gi|126237755|gb|ABO01156.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
Length=629

 Score = 1013 bits (2618),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 480/618 (78%), Positives = 537/618 (87%), Gaps = 0/618 (0%)

Query  9    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  68
            M +HNPFI +G I+FP N NLVRHVE+WAKVRGDKLAYRF+DFSTERDGV RD+ W+DF 
Sbjct  1    MPFHNPFIKDGLIKFPDNGNLVRHVERWAKVRGDKLAYRFIDFSTERDGVERDLTWADFG  60

Query  69   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  128
            ARNRAVGARLQQVTQPGDRVAILCPQNLDYL++FFG LYSGRIAVPLFDP EPGHVGRLH
Sbjct  61   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLVAFFGTLYSGRIAVPLFDPNEPGHVGRLH  120

Query  129  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  188
            AVLDDC PS ILTTT++AEGVRKF R R A +RPRVIAVDAVP EV  TW+  + ++ET+
Sbjct  121  AVLDDCTPSAILTTTEAAEGVRKFFRTRPANQRPRVIAVDAVPNEVGQTWEPVDVHQETI  180

Query  189  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  248
            AYLQYTSGSTRIP+GVQITHLNL TNVVQV+ ALEG+EGDRGVSWLPFFHDMGLIT++++
Sbjct  181  AYLQYTSGSTRIPTGVQITHLNLATNVVQVIEALEGEEGDRGVSWLPFFHDMGLITIMIS  240

Query  249  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP  308
             ++GH  +FMTPAAFVRRPGRWIRE+ARK GETGG  S APNFAF+HAA RGVPR+ EP 
Sbjct  241  PMIGHYISFMTPAAFVRRPGRWIREMARKEGETGGVISVAPNFAFDHAAARGVPREGEPA  300

Query  309  LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP  368
            LDLSNVK +LNGSEP+S A++R F EAF P+G K  A+KPSYGLAEATLFVSTTP++E P
Sbjct  301  LDLSNVKALLNGSEPISAATVRNFNEAFGPFGFKPQAIKPSYGLAEATLFVSTTPVNESP  360

Query  369  TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW  428
             ++ VDRDELNN RFVEV  D+P AVAQ SAGKVGV+EWAVIVD DTA+ELPDGQIGEIW
Sbjct  361  KIVTVDRDELNNHRFVEVPPDSPKAVAQASAGKVGVAEWAVIVDHDTATELPDGQIGEIW  420

Query  429  LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA  488
            + G N+GTGYWGKEEE+  TF+NILKSR + S AEGAPDDA+WVRTGD G +    LYI 
Sbjct  421  ISGQNMGTGYWGKEEETQATFRNILKSRTNPSHAEGAPDDAMWVRTGDLGAFHDGDLYIT  480

Query  489  GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD  548
            GR+KDLVIIDGRNHYPQDLE +AQE+TKALR G+ AAFSVPANQLP  VFD++HAGLK D
Sbjct  481  GRVKDLVIIDGRNHYPQDLEYSAQEATKALRTGFVAAFSVPANQLPDEVFDNAHAGLKRD  540

Query  549  PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK  608
            P DTSEQLVIVGERA G HKLD  PI DDIRAAIAV HGVTVRDVLL  AG IPRTSSGK
Sbjct  541  PSDTSEQLVIVGERAPGAHKLDMGPIADDIRAAIAVRHGVTVRDVLLTPAGAIPRTSSGK  600

Query  609  IGRRACRAAYLDGSLRSG  626
            IGRRACR+AYLDGSLRSG
Sbjct  601  IGRRACRSAYLDGSLRSG  618


>gi|108801974|ref|YP_642171.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. MCS]
 gi|119871126|ref|YP_941078.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. KMS]
 gi|108772393|gb|ABG11115.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
 gi|119697215|gb|ABL94288.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
Length=629

 Score = 1008 bits (2606),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 478/618 (78%), Positives = 536/618 (87%), Gaps = 0/618 (0%)

Query  9    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  68
            M +HNPFI +G I+FP N NLVRHVE+WAKVRGDKLAYRF+DFSTERDGV RD+ W+DF 
Sbjct  1    MPFHNPFIKDGLIKFPDNGNLVRHVERWAKVRGDKLAYRFIDFSTERDGVERDLTWADFG  60

Query  69   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  128
             RNRAVGARLQQVTQPGDRVAILCPQNLDYL++FFG LYSGRIAVPLFDP EPGHVGRLH
Sbjct  61   GRNRAVGARLQQVTQPGDRVAILCPQNLDYLVAFFGTLYSGRIAVPLFDPNEPGHVGRLH  120

Query  129  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  188
            AVLDDC PS ILTTT++AEGVRKF R R A +RPRVIAVDAVP EV  TW+  + ++ET+
Sbjct  121  AVLDDCTPSAILTTTEAAEGVRKFFRTRPANQRPRVIAVDAVPNEVGQTWEPVDVHQETI  180

Query  189  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  248
            AYLQYTSGSTRIP+GVQITHLNL TNVVQV+ ALEG+EGDRGVSWLPFFHDMGLIT++++
Sbjct  181  AYLQYTSGSTRIPTGVQITHLNLATNVVQVIEALEGEEGDRGVSWLPFFHDMGLITIMIS  240

Query  249  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP  308
             ++GH  +FMTPAAFVRRPGRWIRE+ARK GETGG  S APNFAF+HAA RGVPR+ EP 
Sbjct  241  PMIGHYISFMTPAAFVRRPGRWIREMARKEGETGGVISVAPNFAFDHAAARGVPREGEPA  300

Query  309  LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP  368
            LDLSNVK +LNGSEP+S A++R F EAF P+G K  A+KPSYGLAEATLFVSTTP++E P
Sbjct  301  LDLSNVKALLNGSEPISAATVRNFNEAFGPFGFKPQAIKPSYGLAEATLFVSTTPVNESP  360

Query  369  TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW  428
             ++ VDRDELN+ RFVEV  D+P AVAQ SAGKVGV+EWAVIVD DTA+ELPDGQIGEIW
Sbjct  361  KIVTVDRDELNSHRFVEVPPDSPKAVAQASAGKVGVAEWAVIVDHDTATELPDGQIGEIW  420

Query  429  LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA  488
            + G N+GTGYWGKEEE+  TF+NILKSR + S AEGAPDDA+WVRTGD G +    LYI 
Sbjct  421  ISGQNMGTGYWGKEEETQATFRNILKSRTNPSHAEGAPDDAMWVRTGDLGAFHDGDLYIT  480

Query  489  GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD  548
            GR+KDLVIIDGRNHYPQDLE +AQE+TKALR G+ AAFSVPANQLP  VFD++HAGLK D
Sbjct  481  GRVKDLVIIDGRNHYPQDLEYSAQEATKALRTGFVAAFSVPANQLPDEVFDNAHAGLKRD  540

Query  549  PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK  608
            P DTSEQLVIVGERA G HKLD  PI DDIRAAIAV HGVTVRDVLL  AG IPRTSSGK
Sbjct  541  PSDTSEQLVIVGERAPGAHKLDMGPIADDIRAAIAVRHGVTVRDVLLTPAGAIPRTSSGK  600

Query  609  IGRRACRAAYLDGSLRSG  626
            IGRRACR+AYLDGSLRSG
Sbjct  601  IGRRACRSAYLDGSLRSG  618


>gi|120406583|ref|YP_956412.1| long-chain-fatty-acid--CoA ligase [Mycobacterium vanbaalenii 
PYR-1]
 gi|119959401|gb|ABM16406.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii 
PYR-1]
Length=629

 Score =  995 bits (2573),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 475/618 (77%), Positives = 531/618 (86%), Gaps = 0/618 (0%)

Query  9    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  68
            MA+HNPFI +G I+FP N +LV+HVE+WAKVRGDK+AYRFLDFSTERDG+ARD+ W+DF 
Sbjct  1    MAFHNPFIKDGLIKFPDNGSLVKHVERWAKVRGDKVAYRFLDFSTERDGIARDLTWADFG  60

Query  69   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  128
            ARNRAV ARLQQVT+PGDRVAILCPQNL+YL++FFG LYSGRIAVPLFDP EPGHVGRLH
Sbjct  61   ARNRAVAARLQQVTEPGDRVAILCPQNLEYLVAFFGTLYSGRIAVPLFDPNEPGHVGRLH  120

Query  129  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  188
            AVLD+C PS ILTTT++AEGVRKF R R A +RPRVIAVDAVP EV ATW+  +   +T+
Sbjct  121  AVLDNCTPSAILTTTEAAEGVRKFFRTRPANQRPRVIAVDAVPVEVGATWEPVDVTHDTI  180

Query  189  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  248
            AYLQYTSGSTRIP+GVQITHLNL TNVVQV+ AL+G+EGDRGVSWLPFFHDMGLITVLL 
Sbjct  181  AYLQYTSGSTRIPTGVQITHLNLATNVVQVIEALQGEEGDRGVSWLPFFHDMGLITVLLP  240

Query  249  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP  308
            +V+GH   FMTPAAFVRRPGRWIR +ARK G+TGGT S APNFAF+HAA RGVP+D E P
Sbjct  241  TVIGHYVEFMTPAAFVRRPGRWIRAMARKEGDTGGTISVAPNFAFDHAAARGVPKDGEEP  300

Query  309  LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP  368
            LDLSNVK +LNGSEP+S A++R+F EAF P+G +  A+KPSYGLAEATLFVSTTP +E P
Sbjct  301  LDLSNVKAVLNGSEPISAATVRRFNEAFGPFGFQPQAIKPSYGLAEATLFVSTTPSNESP  360

Query  369  TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW  428
             +I VDRDELN  RFVEV  D+P AVAQ  AGKVGV+EWAVIVDA+TASELPDGQIGEIW
Sbjct  361  KIISVDRDELNAHRFVEVPDDSPKAVAQAGAGKVGVAEWAVIVDAETASELPDGQIGEIW  420

Query  429  LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA  488
            + G N+GTGYW K EE+  TF N LKSR + S A+GA DDA WVRTGDYG Y    LYI 
Sbjct  421  ISGQNMGTGYWNKPEETIATFHNTLKSRTTPSHAQGATDDATWVRTGDYGAYHDGELYIT  480

Query  489  GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD  548
            GR+KDLVIIDGRNHYPQDLE +AQE+TKALR GY AAFSVPANQLP  VFDDSHAGLK D
Sbjct  481  GRVKDLVIIDGRNHYPQDLEYSAQEATKALRTGYVAAFSVPANQLPDEVFDDSHAGLKRD  540

Query  549  PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK  608
            P+DTSEQLVIVGERA G HKLD  PI DDIRAAIAV HGVTVRDVLL  AG IPRTSSGK
Sbjct  541  PDDTSEQLVIVGERAPGAHKLDMGPIADDIRAAIAVRHGVTVRDVLLTPAGAIPRTSSGK  600

Query  609  IGRRACRAAYLDGSLRSG  626
            IGRRACR+AYLDGSLR+G
Sbjct  601  IGRRACRSAYLDGSLRAG  618


>gi|118471852|ref|YP_890606.1| long-chain-fatty-acid--CoA ligase [Mycobacterium smegmatis str. 
MC2 155]
 gi|118173139|gb|ABK74035.1| acyl-CoA synthase [Mycobacterium smegmatis str. MC2 155]
Length=630

 Score =  988 bits (2553),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 470/619 (76%), Positives = 537/619 (87%), Gaps = 1/619 (0%)

Query  9    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  68
            M +HNPFI +G+I+FP  +++V HVE+WAKVRGDKLAYRFLDFSTERDGV RD+ W+ FS
Sbjct  1    MPFHNPFIKDGQIKFPDGSSIVAHVERWAKVRGDKLAYRFLDFSTERDGVPRDLTWAQFS  60

Query  69   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  128
            ARNRAV ARLQQVTQPGDRVAILCPQNLDYL++FFGALY+GRIAVPLFDP+EPGHVGRLH
Sbjct  61   ARNRAVAARLQQVTQPGDRVAILCPQNLDYLVAFFGALYAGRIAVPLFDPSEPGHVGRLH  120

Query  129  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQP-EANEET  187
            AVLD+C PS ILTTT++AEGVRKF R R A +RPRVIAVDAVP +VA+TW  P E +E T
Sbjct  121  AVLDNCHPSAILTTTEAAEGVRKFFRTRPANQRPRVIAVDAVPDDVASTWVNPDEPDETT  180

Query  188  VAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLL  247
            +AYLQYTSGSTRIP+GVQITHLNL TNVVQV+ ALEG+EGDRG+SWLPFFHDMGLIT LL
Sbjct  181  IAYLQYTSGSTRIPTGVQITHLNLATNVVQVIEALEGEEGDRGLSWLPFFHDMGLITALL  240

Query  248  ASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEP  307
            A ++GH FTFMTPAAFVRRP RWIRELARK G+TGGT S APNFAF+HAA RGVP+   P
Sbjct  241  APMIGHYFTFMTPAAFVRRPERWIRELARKEGDTGGTISVAPNFAFDHAAARGVPKPGSP  300

Query  308  PLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEV  367
            PLDLSNVK +LNGSEP+S A++R+F EAF P+G    A+KPSYGLAEATLFVSTTP  E 
Sbjct  301  PLDLSNVKAVLNGSEPISAATVRRFNEAFGPFGFPPKAIKPSYGLAEATLFVSTTPSAEE  360

Query  368  PTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEI  427
            P +I VDRD+LN+ R VEV AD+P AVAQ SAGKVG++EWAVIVDA++A+ELPDGQ+GEI
Sbjct  361  PKIITVDRDQLNSGRIVEVDADSPKAVAQASAGKVGIAEWAVIVDAESATELPDGQVGEI  420

Query  428  WLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYI  487
            W+ G N+GTGYWGK EES  TF+NILKSR + S AEGA DDA WVRTGDYG ++   LYI
Sbjct  421  WISGQNMGTGYWGKPEESVATFQNILKSRTNPSHAEGATDDATWVRTGDYGAFYDGDLYI  480

Query  488  AGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKF  547
             GR+KDLVIIDGRNHYPQDLE +AQE++KA+R GY AAFSVPANQLP  VF+++H+G+K 
Sbjct  481  TGRVKDLVIIDGRNHYPQDLEYSAQEASKAIRTGYVAAFSVPANQLPDEVFENAHSGIKR  540

Query  548  DPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSG  607
            DP+DTSEQLVIV ERA G HKLD  PI DDIRAAIAV HGVTVRDVLL +AG IPRTSSG
Sbjct  541  DPDDTSEQLVIVAERAPGAHKLDIGPITDDIRAAIAVRHGVTVRDVLLTAAGAIPRTSSG  600

Query  608  KIGRRACRAAYLDGSLRSG  626
            KIGRRACRAAYLDGSLR+G
Sbjct  601  KIGRRACRAAYLDGSLRAG  619


>gi|315446504|ref|YP_004079383.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium 
sp. Spyr1]
 gi|315264807|gb|ADU01549.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium 
sp. Spyr1]
Length=629

 Score =  987 bits (2552),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 466/618 (76%), Positives = 533/618 (87%), Gaps = 0/618 (0%)

Query  9    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  68
            MA+HNPF+ +G I+FP N NLVRHVE+WAKVRGDK+AYRF+DFSTERDGV RD+ W+DFS
Sbjct  1    MAFHNPFLKDGLIKFPDNGNLVRHVERWAKVRGDKMAYRFIDFSTERDGVERDLHWADFS  60

Query  69   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  128
             RN+AVGARLQQVT+PGDRVAILCPQNLDYL++FFG LYSGRIAVPLFDP EPGHVGRLH
Sbjct  61   TRNKAVGARLQQVTEPGDRVAILCPQNLDYLVAFFGTLYSGRIAVPLFDPNEPGHVGRLH  120

Query  129  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  188
            AVLDDC PS ILTTT +AEGVRKF R R AK+RPRVIAVDAVP EV ATW+  +   +T+
Sbjct  121  AVLDDCTPSAILTTTAAAEGVRKFFRTRPAKDRPRVIAVDAVPDEVGATWEPVDVQHDTI  180

Query  189  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  248
            AYLQYTSGSTRIP+GVQITHLNL TNVVQV+ AL+ +EGDRGVSWLPFFHDMGLITVLL+
Sbjct  181  AYLQYTSGSTRIPTGVQITHLNLATNVVQVIEALDAEEGDRGVSWLPFFHDMGLITVLLS  240

Query  249  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP  308
             +LGH  +FMTPAAFVRRPGRWIR +ARKP +TGG  S APNFAF+HAA R +P+DDEPP
Sbjct  241  PMLGHHISFMTPAAFVRRPGRWIRAMARKPDDTGGVISVAPNFAFDHAAARALPKDDEPP  300

Query  309  LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP  368
            LDLSN+K ILNGSEP+S A++R+F EAF+PYG K  A+KPSYGLAEATLFVSTTP+ E P
Sbjct  301  LDLSNIKCILNGSEPISAATVRRFNEAFSPYGFKPEAIKPSYGLAEATLFVSTTPIHEHP  360

Query  369  TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW  428
             +I VDRDELN+ RFV+V  D+P AVAQ  AG++G++EWAVIVD DTA+ELPDGQIGEIW
Sbjct  361  KIISVDRDELNSHRFVQVPDDSPKAVAQAGAGQIGIAEWAVIVDNDTATELPDGQIGEIW  420

Query  429  LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA  488
            + G N+GTGYW K +E+  TF+N+LKSR + S AEGA  DA WVRTGD G Y    L+I 
Sbjct  421  ISGQNMGTGYWNKPDETIATFQNLLKSRTTPSHAEGADADATWVRTGDLGAYHDGELFIT  480

Query  489  GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD  548
            GR+KDLVIIDGRNHYPQDLE +AQE+TKALR G+ AAFSVPANQLP  VFD++HAG+K D
Sbjct  481  GRVKDLVIIDGRNHYPQDLEYSAQEATKALRTGFVAAFSVPANQLPDEVFDNAHAGIKRD  540

Query  549  PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK  608
            P+D+SEQLVIVGERA G HKLD  PI+DDIRAAIAV HGVTVRDVLL  AG IPRTSSGK
Sbjct  541  PDDSSEQLVIVGERAPGAHKLDMGPIIDDIRAAIAVRHGVTVRDVLLTPAGAIPRTSSGK  600

Query  609  IGRRACRAAYLDGSLRSG  626
            IGRRACR+AYLDGSLRSG
Sbjct  601  IGRRACRSAYLDGSLRSG  618


>gi|145221760|ref|YP_001132438.1| long-chain-fatty-acid--CoA ligase [Mycobacterium gilvum PYR-GCK]
 gi|145214246|gb|ABP43650.1| AMP-dependent synthetase and ligase [Mycobacterium gilvum PYR-GCK]
Length=629

 Score =  987 bits (2551),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 466/618 (76%), Positives = 532/618 (87%), Gaps = 0/618 (0%)

Query  9    MAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFS  68
            MA+HNPF+ +G I+FP N NLVRHVE+WAKVRGDK+AYRF+DFSTERDGV RD+ W+DFS
Sbjct  1    MAFHNPFLKDGLIKFPDNGNLVRHVERWAKVRGDKMAYRFIDFSTERDGVERDLHWADFS  60

Query  69   ARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLH  128
             RN+AVGARLQQVT+PGDRVAILCPQNLDYL++FFG LYSGRIAVPLFDP EPGHVGRLH
Sbjct  61   TRNKAVGARLQQVTEPGDRVAILCPQNLDYLVAFFGTLYSGRIAVPLFDPNEPGHVGRLH  120

Query  129  AVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETV  188
            AVLDDC PS ILTTT +AEGVRKF R R AK+RPRVIAVDAVP EV ATW+  +   +T+
Sbjct  121  AVLDDCTPSAILTTTAAAEGVRKFFRTRPAKDRPRVIAVDAVPDEVGATWEPVDVQHDTI  180

Query  189  AYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLA  248
            AYLQYTSGSTRIP+GVQITHLNL TNVVQV+ AL+ +EGDRGVSWLPFFHDMGLITVLL+
Sbjct  181  AYLQYTSGSTRIPTGVQITHLNLATNVVQVIEALDAEEGDRGVSWLPFFHDMGLITVLLS  240

Query  249  SVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPP  308
             +LGH  +FMTPAAFVRRPGRWIR +ARKP +TGG  S APNFAF+HAA R +P+DDEPP
Sbjct  241  PMLGHHISFMTPAAFVRRPGRWIRAMARKPDDTGGVISVAPNFAFDHAAARALPKDDEPP  300

Query  309  LDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVP  368
            LDLSN+K ILNGSEP+S A++R+F EAF+PYG K  A+KPSYGLAEATLFVST P+ E P
Sbjct  301  LDLSNIKCILNGSEPISAATVRRFNEAFSPYGFKPEAIKPSYGLAEATLFVSTPPIHEHP  360

Query  369  TVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIW  428
             +I VDRDELN+ RFV+V  D+P AVAQ  AG++G++EWAVIVD DTA+ELPDGQIGEIW
Sbjct  361  KIISVDRDELNSHRFVQVPDDSPKAVAQAGAGQIGIAEWAVIVDNDTATELPDGQIGEIW  420

Query  429  LHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIA  488
            + G N+GTGYW K EE+  TF+N+LKSR + S AEGA  DA WVRTGD G Y    L+I 
Sbjct  421  ISGQNMGTGYWNKPEETIATFQNLLKSRTTPSHAEGADADATWVRTGDLGAYHDGELFIT  480

Query  489  GRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFD  548
            GR+KDLVIIDGRNHYPQDLE +AQE+TKALR G+ AAFSVPANQLP  VFD++HAG+K D
Sbjct  481  GRVKDLVIIDGRNHYPQDLEYSAQEATKALRTGFVAAFSVPANQLPDEVFDNAHAGIKRD  540

Query  549  PEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGK  608
            P+D+SEQLVIVGERA G HKLD  PI+DDIRAAIAV HGVTVRDVLL  AG IPRTSSGK
Sbjct  541  PDDSSEQLVIVGERAPGAHKLDMGPIIDDIRAAIAVRHGVTVRDVLLTPAGAIPRTSSGK  600

Query  609  IGRRACRAAYLDGSLRSG  626
            IGRRACR+AYLDGSLRSG
Sbjct  601  IGRRACRSAYLDGSLRSG  618


>gi|169627284|ref|YP_001700933.1| long-chain-fatty-acid--CoA ligase [Mycobacterium abscessus ATCC 
19977]
 gi|169239251|emb|CAM60279.1| Probable fatty-acid-CoA ligase FadD [Mycobacterium abscessus]
Length=637

 Score =  863 bits (2229),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 413/626 (66%), Positives = 504/626 (81%), Gaps = 8/626 (1%)

Query  9    MAYHNPFIVN-GKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDF  67
            MA+ NPF+ + G I+FP + ++V HVE +A+ +G+ LAYRFLDFSTERDG   DI W+ F
Sbjct  1    MAFDNPFLDSAGHIKFPEDGSIVGHVEGFAQSQGESLAYRFLDFSTERDGAYIDITWAQF  60

Query  68   SARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRL  127
             ARNRAV ARLQQVT+PGDRVAIL PQ+LDYL++ FGALY+G I+VPLFDP+E GH GRL
Sbjct  61   GARNRAVAARLQQVTKPGDRVAILAPQSLDYLVAHFGALYAGAISVPLFDPSEAGHAGRL  120

Query  128  HAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEET  187
            HAVLDDC PS +LTTTD AEGVRKF R R  KERPRVIAVDA+P +V +TW +P A ++T
Sbjct  121  HAVLDDCQPSAVLTTTDCAEGVRKFFRNRPPKERPRVIAVDAIPNDVGSTWVEPVATKDT  180

Query  188  VAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGD------RGVSWLPFFHDMG  241
            +AYLQYTSGSTR P+GVQITHLN+ TN++Q+++AL  QEG       RG +WLPFFHDMG
Sbjct  181  IAYLQYTSGSTRAPAGVQITHLNVATNLLQLIDALSAQEGAQGHEALRGCTWLPFFHDMG  240

Query  242  LITVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGV  301
            LITV++ S+LG   T M+PAAF+RRP RW+RE+A K  + GG+FSA PNFAFEH A+RGV
Sbjct  241  LITVMVPSMLGKHMTVMSPAAFIRRPLRWLREMAVKGEDRGGSFSALPNFAFEHCALRGV  300

Query  302  PRDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVST  361
            P++ EPPLDLSN+  I+NGSEPVS AS++KF +AF PYG    A+ PSYG+AEATLFVS+
Sbjct  301  PKEGEPPLDLSNIHSIINGSEPVSTASLKKFCDAFEPYGFDPKAIHPSYGMAEATLFVSS  360

Query  362  TPMDEVPT-VIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELP  420
            T  +  P  V+HVDR ELN  R V+VA  A N++ QVS+G++   EWAVIVD ++ASE+P
Sbjct  361  TIWNTEPARVLHVDRTELNAGRIVQVAPGAENSLTQVSSGRMARDEWAVIVDGESASEVP  420

Query  421  DGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTY  480
            DGQIG+IWLHGNN+G+GYWG+ EE+ + F+N LKSRI  S AEGAPDDA W+ TGD G +
Sbjct  421  DGQIGQIWLHGNNIGSGYWGRPEETREAFQNTLKSRIPASHAEGAPDDANWLNTGDLGVW  480

Query  481  FKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDD  540
                LYI GR+KDL+I+DGRNHYPQD+E TAQE+ KALR GY AAFSVPANQLPQ VFD+
Sbjct  481  VDGELYITGRVKDLIIVDGRNHYPQDIEYTAQEANKALRPGYVAAFSVPANQLPQVVFDN  540

Query  541  SHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGT  600
             HAGLK+DPED+SEQLVI+GER+ G HK D+Q + DD+RAA+AV HGVTVRDVLLV AG+
Sbjct  541  PHAGLKYDPEDSSEQLVIIGERSVGGHKSDNQAVGDDVRAAVAVRHGVTVRDVLLVPAGS  600

Query  601  IPRTSSGKIGRRACRAAYLDGSLRSG  626
            I RTSSGKI R A R +YLDGSLR G
Sbjct  601  IARTSSGKIARSAARTSYLDGSLRGG  626


>gi|256855995|emb|CBB12337.1| FadD32 protein [Rhodococcus aetherivorans]
Length=629

 Score =  791 bits (2044),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 380/610 (63%), Positives = 470/610 (78%), Gaps = 3/610 (0%)

Query  18   NGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSARNRAVGAR  77
            NG+I  P    L+ H+E+     GD LAYR++D+S ERDG   ++ W  F  R RA+ AR
Sbjct  12   NGQIVLPEGNTLLDHLEQHFAENGDDLAYRYIDYSRERDGEVHELTWQQFGVRLRAIAAR  71

Query  78   LQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHAVLDDCAPS  137
            LQQVT+PGDRVAIL PQ LDY++SFF A+Y+G IAVPLFDP EPGH  RLHAVL DC PS
Sbjct  72   LQQVTKPGDRVAILAPQGLDYVVSFFAAIYAGTIAVPLFDPDEPGHTDRLHAVLGDCTPS  131

Query  138  TILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETVAYLQYTSGS  197
             ILT T SA GVR+F R   A ERPR+IAVDA+P  VA +W +P    + +AYLQYTSGS
Sbjct  132  AILTATSSAAGVRQFFRPLPAAERPRIIAVDAIPDTVAGSWTRPHIGTDDIAYLQYTSGS  191

Query  198  TRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGHSFTF  257
            TR+P+GV+ITH  + TN +Q+ +++E  EG RGV+WLP FHDMGL+TV+L ++ G   T 
Sbjct  192  TRVPAGVEITHRGVLTNCIQMADSIELNEGSRGVTWLPLFHDMGLLTVILPAIGGKYITI  251

Query  258  MTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPLDLSNVKGI  317
            M+P AFV+RPGRWI+ELA    +  GTF+AAPNFAFEHAA RG+P+  E  LDLSNV G+
Sbjct  252  MSPRAFVQRPGRWIKELA-AVSDGAGTFAAAPNFAFEHAAARGLPKPGE-TLDLSNVIGL  309

Query  318  LNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTVIHVDRDE  377
            +NGSEPV+ +SMRKF +AFAPYGL +TA+KPSYG+AEATLFVS+T   +   VI+VDR E
Sbjct  310  INGSEPVTTSSMRKFNDAFAPYGLPKTAIKPSYGMAEATLFVSSTRHTDEARVIYVDRHE  369

Query  378  LNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLHGNNLGTG  437
            LN  R V+V  +APNA+AQVS G V  S+WA IVDA+TA+E+PDG +GEIWLHG N+G G
Sbjct  370  LNAGRIVKVDKEAPNAIAQVSCGYVARSQWAAIVDAETATEVPDGHVGEIWLHGENIGIG  429

Query  438  YWGKEEESAQTFKNILKSRI-SESRAEGAPDDALWVRTGDYGTYFKDHLYIAGRIKDLVI  496
            YWG+ +E+ +TF N L  R+ + S AEG P DA W+RTGDYG Y    LYI GR+KDLVI
Sbjct  430  YWGRTQETDETFHNKLVDRLPASSHAEGTPADAHWLRTGDYGVYVDGELYITGRVKDLVI  489

Query  497  IDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFDPEDTSEQL  556
            +DGRNHYPQDLE +AQE++ ALR G+ AAF+VPANQLPQ VF++SH+GL+FDP+D SEQL
Sbjct  490  VDGRNHYPQDLEFSAQEASSALRPGFVAAFAVPANQLPQVVFENSHSGLQFDPDDASEQL  549

Query  557  VIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKIGRRACRA  616
            VIV ERA G  K D QP+ D +RAAI+  HGVT RDVLLV AG+IPRTSSGKI RRAC+A
Sbjct  550  VIVAERAPGAGKADPQPVADTVRAAISARHGVTARDVLLVPAGSIPRTSSGKIARRACKA  609

Query  617  AYLDGSLRSG  626
            AY++G+LR G
Sbjct  610  AYIEGTLRGG  619


>gi|54022152|ref|YP_116394.1| long-chain-fatty-acid--CoA ligase [Nocardia farcinica IFM 10152]
 gi|54013660|dbj|BAD55030.1| putative acyl-CoA synthetase [Nocardia farcinica IFM 10152]
Length=652

 Score =  767 bits (1981),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 380/632 (61%), Positives = 474/632 (75%), Gaps = 12/632 (1%)

Query  5    GESGM--AYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDI  62
            GE GM   + +     G IR P +  LV HVEK  +   + LAYR++D+S ERDG   ++
Sbjct  11   GEEGMEETFDDYLDETGNIRIPEDHTLVDHVEKHTRNDANTLAYRYIDYSRERDGEVHEL  70

Query  63   LWSDFSARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPG  122
             W  F  R RAV ARLQQVT+ GDRVAIL PQ LDY++SFF A+Y+G I+VPLFDP EPG
Sbjct  71   TWQQFGVRLRAVAARLQQVTKRGDRVAILAPQGLDYVVSFFAAIYAGTISVPLFDPDEPG  130

Query  123  HVGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPE  182
            H  RLHAVL DC PS ILT + SA GVR+F R+  A +RPR+IAVDA+P  V  +W +P+
Sbjct  131  HTDRLHAVLGDCEPSAILTASSSAAGVRQFFRSLPAAQRPRIIAVDAIPDSVGESWVRPD  190

Query  183  ANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGL  242
               + +AYLQYTSGSTR+P+GV+ITH  + TN++Q+++A++     RGV+WLP FHDMGL
Sbjct  191  IKIDDIAYLQYTSGSTRVPAGVEITHRAVGTNLLQMVDAIKLDWNSRGVTWLPLFHDMGL  250

Query  243  ITVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVP  302
            +TV+L +V G   T M+P+AFVRRP RWI+ELA    +  GTF+AAPNFAFEHAA RG+P
Sbjct  251  LTVILPAVGGKYITIMSPSAFVRRPYRWIKELA-AVSDGAGTFAAAPNFAFEHAAARGLP  309

Query  303  RDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTT  362
            ++ E  LDLSNV G++NGSEPV+ +SM+KF EAFAPYGL +TA+KP YG+AEATLFVS T
Sbjct  310  KNGE-SLDLSNVIGLINGSEPVTTSSMKKFNEAFAPYGLPKTAIKPCYGMAEATLFVSAT  368

Query  363  PMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTAS-----  417
              ++   V +VDR+ELN  R V+V   A NA+AQVS G V +S+WAVIVD  T       
Sbjct  369  KAEDEAKVTYVDRNELNAGRMVKVDPSAENAIAQVSCGYVALSQWAVIVDPATVESDGGG  428

Query  418  -ELPDGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISE-SRAEGAPDDALWVRTG  475
             ELPDG +GEIWLHGNN+G GYW + +E+ +TF+N +  R++E S AEGA +DA W+RTG
Sbjct  429  RELPDGHVGEIWLHGNNMGIGYWNRPDETQKTFRNKVTQRLAEGSHAEGAAEDADWMRTG  488

Query  476  DYGTYFKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQ  535
            DYG YF+  LYI GR+KDLVI+DGRNHYPQDLE +AQE++KALR G+ AAFSVPANQLP 
Sbjct  489  DYGVYFEGELYITGRVKDLVIVDGRNHYPQDLEYSAQEASKALRPGFIAAFSVPANQLPA  548

Query  536  TVFDD-SHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVL  594
             VF+  SH+GLKFDP+D SEQLVIV ER  G  K D  PI D +RAAI+  HGVTVRDVL
Sbjct  549  EVFEQGSHSGLKFDPDDASEQLVIVAERGPGAGKADPGPIADAVRAAISQRHGVTVRDVL  608

Query  595  LVSAGTIPRTSSGKIGRRACRAAYLDGSLRSG  626
            LV AG+IPRTSSGKI RRAC+ AYL+G+LR G
Sbjct  609  LVPAGSIPRTSSGKIARRACKTAYLEGTLRGG  640


>gi|226363352|ref|YP_002781134.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus B4]
 gi|226241841|dbj|BAH52189.1| long-chain fatty acyl-AMP ligase FadD32 [Rhodococcus opacus B4]
Length=631

 Score =  765 bits (1976),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 365/610 (60%), Positives = 471/610 (78%), Gaps = 3/610 (0%)

Query  18   NGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSARNRAVGAR  77
             G IR  + + LV +V++  +   D+LAYR++D+S +RDG A+++ W  F  R RAV AR
Sbjct  12   TGHIRLDSGSTLVDYVQRHTRENSDELAYRYIDYSRDRDGEAQELTWEQFGHRLRAVAAR  71

Query  78   LQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHAVLDDCAPS  137
            LQQVT+PGDRVA+L PQ LDY+ISFF A+++G I+VPLFDP EPGH  RLHAVL DC P+
Sbjct  72   LQQVTKPGDRVAVLAPQGLDYVISFFAAIHAGAISVPLFDPDEPGHTDRLHAVLGDCKPA  131

Query  138  TILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETVAYLQYTSGS  197
             ILT T SA GVR+F R+  A ERPR+IAVDA+P  V  +W +PE + + +AYLQYTSGS
Sbjct  132  AILTATSSAAGVRQFFRSLPAAERPRIIAVDAIPDSVGESWVRPEIDLDDIAYLQYTSGS  191

Query  198  TRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGHSFTF  257
            TR+P+GV+ITH  + TN +Q+++++E  E  RGV+WLP FHDMGL+TV+L ++ G   T 
Sbjct  192  TRVPAGVEITHRAVGTNALQMVDSIELNENSRGVTWLPLFHDMGLLTVILPALGGKYITI  251

Query  258  MTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPLDLSNVKGI  317
            M+P AFV+RP RWI+ELA    +  GTF+AAPNFAFEHAA RG+P+  E  LDLSNV G+
Sbjct  252  MSPRAFVQRPYRWIKELA-AVSDGAGTFAAAPNFAFEHAAARGLPKSGE-SLDLSNVIGL  309

Query  318  LNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTVIHVDRDE  377
            +NGSEPV+ +SMRKF EAFAPYGL +TA+KPSYG+AEATLFVS+T   +   VI+VDRDE
Sbjct  310  INGSEPVTTSSMRKFNEAFAPYGLPKTAIKPSYGMAEATLFVSSTRHSDEARVIYVDRDE  369

Query  378  LNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLHGNNLGTG  437
            LN  R V+V  DA NA+ QVS G V  S+WA IVD ++  E PD ++GEIWLHG N+G G
Sbjct  370  LNAGRVVKVDQDAENAIPQVSCGYVARSQWAAIVDPESRIEQPDDRVGEIWLHGENIGIG  429

Query  438  YWGKEEESAQTFKNILKSRISE-SRAEGAPDDALWVRTGDYGTYFKDHLYIAGRIKDLVI  496
            YWG+ +E+A+TF N L +R++E S AEG P+DA W+RTGDYG Y    L+I GR+KDLVI
Sbjct  430  YWGRTDETAETFHNKLTNRLAEGSHAEGTPEDANWMRTGDYGVYIDGELFITGRVKDLVI  489

Query  497  IDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFDPEDTSEQL  556
            +DGRNHYPQDLE +AQE++ ALR G+ AAF+VPANQLP  VF+++H+GL +D +D+SEQL
Sbjct  490  VDGRNHYPQDLEFSAQEASTALRPGFVAAFAVPANQLPAVVFENTHSGLNYDADDSSEQL  549

Query  557  VIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKIGRRACRA  616
            VIV ERA G  K D QP+ D +RAA++  HGVT RD+LLV AG+IPRTSSGKI RRAC+A
Sbjct  550  VIVAERAPGAGKADPQPVADTVRAALSTRHGVTARDILLVPAGSIPRTSSGKIARRACKA  609

Query  617  AYLDGSLRSG  626
            +Y++G+LR G
Sbjct  610  SYIEGTLRGG  619


>gi|111021047|ref|YP_704019.1| long-chain-fatty-acid--CoA ligase [Rhodococcus jostii RHA1]
 gi|110820577|gb|ABG95861.1| fatty-acid--CoA ligase [Rhodococcus jostii RHA1]
Length=645

 Score =  765 bits (1975),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 371/625 (60%), Positives = 479/625 (77%), Gaps = 5/625 (0%)

Query  5    GESGM-AYHNPFI-VNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDI  62
            G  GM A  + FI   G IR  + + LV +V++  +   D+LAYR++D+S +RDG A+++
Sbjct  11   GGDGMNAKFDDFIDEKGHIRLDSGSTLVDYVQRHTRENSDELAYRYIDYSRDRDGEAQEL  70

Query  63   LWSDFSARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPG  122
             W  F  R RAV ARLQQVT+PGDRVA+L PQ LDY+ISFF A+++G I+VPLFDP EPG
Sbjct  71   TWEQFGHRLRAVAARLQQVTKPGDRVAVLAPQGLDYVISFFAAIHAGTISVPLFDPDEPG  130

Query  123  HVGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPE  182
            H  RLHAVL DC P+ ILT T SA GVR+F R+  A +RPR+IAVDA+P  V  +W +PE
Sbjct  131  HTDRLHAVLSDCTPAAILTATSSAAGVRQFFRSLPAAQRPRIIAVDAIPDSVGESWVRPE  190

Query  183  ANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGL  242
             + + +AYLQYTSGSTR+P+GV+ITH  + TN +Q+++++E  E  RGV+WLP FHDMGL
Sbjct  191  IDLDDIAYLQYTSGSTRVPAGVEITHRAVGTNALQMVDSIELNENSRGVTWLPLFHDMGL  250

Query  243  ITVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVP  302
            +TV+L ++ G   T M+P AFV+RP RWI+ELA    +  GTF+AAPNFAFEHAA RG+P
Sbjct  251  LTVILPALGGKYITIMSPRAFVQRPYRWIKELA-AVSDGAGTFAAAPNFAFEHAAARGLP  309

Query  303  RDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTT  362
            ++ E  LDLSNV G++NGSEPV+ +SMRKF EAFAPYGL +TA+KPSYG+AEATLFVS+T
Sbjct  310  KNGE-SLDLSNVIGLINGSEPVTTSSMRKFNEAFAPYGLPKTAIKPSYGMAEATLFVSST  368

Query  363  PMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDG  422
               +   VI+VDRDELN  R V+V  DA NA+ QVS G V  S+WA IVD ++  E PD 
Sbjct  369  RHSDEARVIYVDRDELNAGRVVKVDQDAENAIPQVSCGYVARSQWAAIVDPESRIEQPDD  428

Query  423  QIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISE-SRAEGAPDDALWVRTGDYGTYF  481
            ++GEIWLHG N+G GYWG+ +E+A+TF+N L +R++E S AEG P+DA W+RTGDYG Y 
Sbjct  429  RVGEIWLHGENIGIGYWGRTDETAETFQNKLTNRLAEGSHAEGTPEDANWMRTGDYGVYI  488

Query  482  KDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDS  541
               L+I GR+KDLVI+DGRNHYPQDLE +AQE++ ALR G+ AAF+VPANQLP  VF+++
Sbjct  489  DGELFITGRVKDLVIVDGRNHYPQDLEYSAQEASTALRPGFVAAFAVPANQLPAVVFENT  548

Query  542  HAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTI  601
            H+GL +D  D+SEQLVIV ERA G  K D QPI D +RAA++  HGVT RD+LLV AG+I
Sbjct  549  HSGLNYDAGDSSEQLVIVAERAPGAGKADPQPIADTVRAALSSRHGVTARDILLVPAGSI  608

Query  602  PRTSSGKIGRRACRAAYLDGSLRSG  626
            PRTSSGKI RRAC+A+Y++G+LR G
Sbjct  609  PRTSSGKIARRACKASYIEGTLRGG  633


>gi|312137705|ref|YP_004005041.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
 gi|325675144|ref|ZP_08154830.1| acyl-CoA synthase [Rhodococcus equi ATCC 33707]
 gi|311887044|emb|CBH46353.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
 gi|325554105|gb|EGD23781.1| acyl-CoA synthase [Rhodococcus equi ATCC 33707]
Length=631

 Score =  763 bits (1971),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 375/611 (62%), Positives = 469/611 (77%), Gaps = 5/611 (0%)

Query  18   NGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSARNRAVGAR  77
            +G IR      L+ +V++  +     L YR++D+S ERDG A ++ W  F  R RAV AR
Sbjct  12   HGHIRLTPGHTLIDYVDEHTRNNAGDLVYRYVDYSRERDGEAHELTWGQFGLRLRAVAAR  71

Query  78   LQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHAVLDDCAPS  137
            LQQVT+ GDRVAIL PQ LDY+ SFF A+++GRIAVPLFDP EPGH  RLHAVL DC P+
Sbjct  72   LQQVTEYGDRVAILAPQGLDYVTSFFAAIHAGRIAVPLFDPDEPGHTDRLHAVLGDCEPA  131

Query  138  TILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETVAYLQYTSGS  197
             ILT T SA GVR+F R+  A +RPR+IAVDA+P  V  TW +P    + +AYLQYTSGS
Sbjct  132  AILTATSSAAGVRQFFRSLPAAKRPRIIAVDAIPDSVGDTWVRPAIELDDIAYLQYTSGS  191

Query  198  TRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGHSFTF  257
            TR P+GV+ITH  + TNV+Q++++L   E  RGV+WLP +HDMGL+TV+L ++ G   T 
Sbjct  192  TRTPAGVEITHRGVATNVLQMVDSLGLSEHSRGVTWLPLYHDMGLLTVILPALGGQYITI  251

Query  258  MTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPLDLSNVKGI  317
            M+P AFV+RP RWI+ELA    +  GT++AAPNFAFEHAA+RG+P++ E  LDLSNV G+
Sbjct  252  MSPRAFVQRPYRWIKELA-AIADGAGTYAAAPNFAFEHAAIRGLPKEGE-HLDLSNVIGL  309

Query  318  LNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTT-PMDEVPTVIHVDRD  376
            +NGSEPV+ +SMRKF EAFAPYGL +TA+KPSYG+AEATLFVSTT P DE   V++VDRD
Sbjct  310  INGSEPVTVSSMRKFNEAFAPYGLPKTAIKPSYGMAEATLFVSTTHPSDEA-KVMYVDRD  368

Query  377  ELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLHGNNLGT  436
            ELN  R V+V  DAP AVAQV+ G V  S+WA IVD +TA+E PDG +GEIWLHG+N+G 
Sbjct  369  ELNAGRMVQVDQDAPGAVAQVACGAVSRSQWATIVDPETAAERPDGYVGEIWLHGDNIGQ  428

Query  437  GYWGKEEESAQTFKNILKSRI-SESRAEGAPDDALWVRTGDYGTYFKDHLYIAGRIKDLV  495
            GYWG+E+E+A+TF N L  R+ ++S AEGAPDDA W+RTGDYG +    LYI GR+KDLV
Sbjct  429  GYWGREQETAETFHNKLLQRLPADSHAEGAPDDANWLRTGDYGVFVDGELYITGRVKDLV  488

Query  496  IIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFDPEDTSEQ  555
            I+DGRNHYPQDLE +AQE++ ALR G+ AAF+ PANQLP  VF++SH+GL FD +D SEQ
Sbjct  489  IVDGRNHYPQDLEYSAQEASSALRPGFVAAFACPANQLPPQVFENSHSGLVFDQDDASEQ  548

Query  556  LVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKIGRRACR  615
            LVIV ERA G  K D QPI D +RAAI+  HGVT RDVLLV AG+IPRTSSGK+ RRAC+
Sbjct  549  LVIVAERAPGAGKADPQPIADAVRAAISARHGVTARDVLLVPAGSIPRTSSGKLARRACK  608

Query  616  AAYLDGSLRSG  626
            AAY++G+LR G
Sbjct  609  AAYVEGTLRGG  619


>gi|226303709|ref|YP_002763667.1| long-chain fatty acyl-AMP ligase FadD32 [Rhodococcus erythropolis 
PR4]
 gi|229492564|ref|ZP_04386367.1| putative fatty-acid--CoA ligase fadD26 [Rhodococcus erythropolis 
SK121]
 gi|226182824|dbj|BAH30928.1| probable long-chain fatty acyl-AMP ligase FadD32 [Rhodococcus 
erythropolis PR4]
 gi|229320550|gb|EEN86368.1| putative fatty-acid--CoA ligase fadD26 [Rhodococcus erythropolis 
SK121]
Length=629

 Score =  759 bits (1961),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 369/610 (61%), Positives = 463/610 (76%), Gaps = 3/610 (0%)

Query  18   NGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSARNRAVGAR  77
             G+IR      LV +VE+ ++V  D+LAYR++D+S ERDG A ++ W  F  R RAV AR
Sbjct  12   KGQIRLQPGFTLVDYVEQHSRVNADELAYRYIDYSRERDGEALELTWEQFGVRLRAVAAR  71

Query  78   LQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHAVLDDCAPS  137
            LQQVT+ GDRVAIL PQ LDY+ISFF A+ +G IAVPLFDP EPGH  RLHAVL DC P+
Sbjct  72   LQQVTKRGDRVAILAPQGLDYVISFFAAIQAGSIAVPLFDPDEPGHTDRLHAVLGDCKPT  131

Query  138  TILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETVAYLQYTSGS  197
             ILT   SA GVR+  R+  A ERPR+IAVDA+P  V  TW +P+   + +AYLQYTSGS
Sbjct  132  AILTAASSAAGVRQLFRSLPAAERPRIIAVDAIPDTVGETWVRPDIELDDIAYLQYTSGS  191

Query  198  TRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGHSFTF  257
            TR+P+GV+ITH  + TN +Q+++++E  E  RGV+WLP FHDMGL+TV+L ++ G   T 
Sbjct  192  TRVPAGVEITHRAVGTNALQMVDSIELNEDSRGVTWLPLFHDMGLLTVILPALGGKYITI  251

Query  258  MTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPLDLSNVKGI  317
            M+P AFV+RP RWI+ELA    +  GTF+AAPNFAFEHAA RG+P+D E  LDLSNV G+
Sbjct  252  MSPRAFVQRPYRWIKELA-AVSDGAGTFAAAPNFAFEHAAARGLPKDGE-TLDLSNVIGL  309

Query  318  LNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTVIHVDRDE  377
            +NGSEPV+ +SMRKF +AFA YGL +TA+KPSYG+AEATLFVS+T   +   VI+VDR E
Sbjct  310  INGSEPVTTSSMRKFNDAFAQYGLPKTAIKPSYGMAEATLFVSSTKHSDEAKVIYVDRTE  369

Query  378  LNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLHGNNLGTG  437
            LN  R V V   + NA+AQVS G V  S+WA IVD +T +E+PD  +GEIWLHG N+G G
Sbjct  370  LNKGRMVIVDQYSENAIAQVSCGYVSRSQWAAIVDPETLTEVPDNHVGEIWLHGENIGIG  429

Query  438  YWGKEEESAQTFKNILKSRISE-SRAEGAPDDALWVRTGDYGTYFKDHLYIAGRIKDLVI  496
            YWG+ +E+A+TF N L +R+SE S  EG P DA W+RTGD+G Y    LYI GR+KDLVI
Sbjct  430  YWGRPDETAETFHNKLDNRLSEDSHTEGTPADANWMRTGDFGVYVDGELYITGRVKDLVI  489

Query  497  IDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFDPEDTSEQL  556
            +DGRNHYPQDLE +AQE++ ALR G+ AAF+VPANQLP  VF ++H+GLKFD +D+SEQL
Sbjct  490  VDGRNHYPQDLEASAQEASPALRPGFIAAFAVPANQLPSVVFSNTHSGLKFDDDDSSEQL  549

Query  557  VIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKIGRRACRA  616
            VIV ERA G  K D QPI D +RAAI+  HGVT RD+LLV AG+IPRTSSGKI RRAC+A
Sbjct  550  VIVAERAPGAGKADPQPIADTVRAAISSRHGVTARDILLVPAGSIPRTSSGKIARRACKA  609

Query  617  AYLDGSLRSG  626
            +Y++G+LR G
Sbjct  610  SYIEGTLRGG  619


>gi|262200246|ref|YP_003271454.1| AMP-dependent synthetase and ligase [Gordonia bronchialis DSM 
43247]
 gi|262083593|gb|ACY19561.1| AMP-dependent synthetase and ligase [Gordonia bronchialis DSM 
43247]
Length=640

 Score =  753 bits (1943),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 376/619 (61%), Positives = 460/619 (75%), Gaps = 13/619 (2%)

Query  18   NGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSARNRAVGAR  77
            NG +RF  +  LV +VE+  +   D LAYRF+D+S ERDG  +D+ WS F  R RAV AR
Sbjct  13   NGNLRFTEDATLVDYVERNVRDAADTLAYRFIDYSRERDGEYQDLTWSQFGKRLRAVAAR  72

Query  78   LQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHAVLDDCAPS  137
            LQQVT+PGDRVAIL PQ+L+Y+I FF ALY+  +AVPLF P EPGH  RLHAVL DC P+
Sbjct  73   LQQVTKPGDRVAILAPQSLEYVIGFFSALYASNVAVPLFSPDEPGHTDRLHAVLADCKPT  132

Query  138  TILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEA----NEETVAYLQY  193
             ILT+T SAE VR F     AKERPRVIAVDAVP  V ++W  P A    N +TVAYLQY
Sbjct  133  AILTSTKSAEAVRDFFAPLPAKERPRVIAVDAVPDSVGSSWVAPVAGKDHNRDTVAYLQY  192

Query  194  TSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGH  253
            TSGSTR+P+GV+IT+  +  NV+Q+ + +E     RGV+WLP FHDMGL+TV+L ++ G 
Sbjct  193  TSGSTRVPAGVEITYEAVAANVLQIYDCIEIDRNARGVTWLPMFHDMGLLTVILPALGGR  252

Query  254  SFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPLDLSN  313
              T M+P AFVRRPGRWI+ELA    +   T++AAPNFAFEHAA+RG+P++ E  LDLSN
Sbjct  253  YITIMSPQAFVRRPGRWIKELA-AAADGAETYAAAPNFAFEHAAIRGLPKEGE-SLDLSN  310

Query  314  VKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTVIHV  373
            V G++NGSEPV+ +SM+KF EAFAPYGL +TA+KP YG+AEATLFVS T  +    +I+V
Sbjct  311  VIGLINGSEPVTVSSMKKFNEAFAPYGLPKTAIKPCYGMAEATLFVSATQRNNEAKIIYV  370

Query  374  DRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDAD-----TASELPDGQIGEIW  428
            DRDELN  RF  V +DAPNAVAQVS G+V VS+WA IVD        A+E PDG +GEIW
Sbjct  371  DRDELNAGRFALVDSDAPNAVAQVSCGQVAVSQWATIVDTSQVEDGIATEQPDGHVGEIW  430

Query  429  LHGNNLGTGYWGKEEESAQTFKNILKSRISE-SRAEGAPDDALWVRTGDYGTYFKDHLYI  487
            LHG N+G GYW K EE+  TF N L   ++E S +EGAP DA W+RTGDYG +    LYI
Sbjct  431  LHGLNIGAGYWNKPEETEATFHNTLTHPLAEGSHSEGAPQDAKWMRTGDYGVWLDGELYI  490

Query  488  AGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKF  547
             GR+KDLVI+DGRNHYPQDLE +AQE++ ALR G+ AAF+VPAN+LP  VF+ S +GL+F
Sbjct  491  TGRVKDLVIVDGRNHYPQDLEYSAQEASSALRPGFIAAFAVPANELPPVVFEQSTSGLQF  550

Query  548  DPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSG  607
            D +D+SEQLVIV ER  G  + D Q I D +RAAIA  HGV  RDVLLV AG+IPRTSSG
Sbjct  551  DADDSSEQLVIVAERGPG-KRTDPQEIADTVRAAIAQRHGVMARDVLLVPAGSIPRTSSG  609

Query  608  KIGRRACRAAYLDGSLRSG  626
            KI RRA +AAY+DGSLR G
Sbjct  610  KIARRATKAAYIDGSLRGG  628


>gi|343926232|ref|ZP_08765741.1| long-chain fatty acyl-AMP ligase FadD32 [Gordonia alkanivorans 
NBRC 16433]
 gi|343763861|dbj|GAA12667.1| long-chain fatty acyl-AMP ligase FadD32 [Gordonia alkanivorans 
NBRC 16433]
Length=634

 Score =  749 bits (1933),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 373/614 (61%), Positives = 457/614 (75%), Gaps = 8/614 (1%)

Query  18   NGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSARNRAVGAR  77
             G I F     LV +VE+  + + D LAYRF+D+S ERDG A+D+ W+ F  R RAV AR
Sbjct  13   TGNISFTEEATLVDYVEQNVREQADTLAYRFIDYSRERDGEAQDLTWAQFGKRLRAVAAR  72

Query  78   LQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHAVLDDCAPS  137
            LQQVT+PGDRVAIL PQ+L+Y+I FF ALY+  +AVPLF P EPGH  RLHAVLDDC P+
Sbjct  73   LQQVTKPGDRVAILAPQSLEYVIGFFSALYASNVAVPLFSPDEPGHTDRLHAVLDDCKPT  132

Query  138  TILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEA----NEETVAYLQY  193
             ILT+T SAE VR F     AKERPRVIAVDAVP  V ++W  P A    N++TVAYLQY
Sbjct  133  AILTSTKSAEAVRDFFAPLPAKERPRVIAVDAVPDSVGSSWVAPIAGKDHNKDTVAYLQY  192

Query  194  TSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGH  253
            TSGSTR+P+GV+IT+  +  NV+Q+ + ++     RGV+WLP FHDMGL+TV+L ++ G 
Sbjct  193  TSGSTRVPAGVEITYQAVAANVLQISDTIQIDRNARGVTWLPMFHDMGLLTVILPALGGR  252

Query  254  SFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPLDLSN  313
              T M+P AFVRRPGRWI+ELA    +   T++AAPNFAFEHAA RG+P++ E  LDLSN
Sbjct  253  YITIMSPQAFVRRPGRWIKELA-AAADGAETYAAAPNFAFEHAAARGLPKEGE-ELDLSN  310

Query  314  VKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTVIHV  373
            V G++NGSEPV+ +SM+KF EAFAPYGL +TA+KP YG+AEATLFVS T  +    VI+V
Sbjct  311  VIGLINGSEPVTVSSMKKFNEAFAPYGLPKTAIKPCYGMAEATLFVSATQRENEAKVIYV  370

Query  374  DRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLHGNN  433
            DRD+LN  +   V    PN+VAQVS G+V VS+WAVIVD +TASE PDG +GEIWLHG N
Sbjct  371  DRDDLNAGKLTVVEEGTPNSVAQVSCGQVAVSQWAVIVDPETASERPDGHVGEIWLHGLN  430

Query  434  LGTGYWGKEEESAQTFKNILKSRISE-SRAEGAPDDALWVRTGDYGTYFKDHLYIAGRIK  492
            +G GYW K  E+ +TF N L + +SE S +EGAP D LW+RTGDYG +    LYI GR+K
Sbjct  431  IGAGYWNKPAETEETFHNKLVTPLSEGSHSEGAPADGLWMRTGDYGVWLDGELYITGRVK  490

Query  493  DLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFDPEDT  552
            DLVI+DGRNHYPQDLE +AQE++ ALR G+ AAFSVPANQLP  VF+ + +GL  DP+D 
Sbjct  491  DLVIVDGRNHYPQDLEYSAQEASTALRPGFVAAFSVPANQLPAVVFEFAGSGLTPDPDDA  550

Query  553  SEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKIGRR  612
            SEQLVIV ER  G  K D Q + D +RAA+A  HGV  RDVLLV AG+IPRTSSGKI RR
Sbjct  551  SEQLVIVAERGPG-RKADPQEVADTVRAAVAQRHGVMARDVLLVPAGSIPRTSSGKIARR  609

Query  613  ACRAAYLDGSLRSG  626
            A R AY+DGSLR G
Sbjct  610  ATRTAYIDGSLRGG  623


>gi|333917786|ref|YP_004491367.1| fatty-acid--CoA ligase [Amycolicicoccus subflavus DQS3-9A1]
 gi|333480007|gb|AEF38567.1| Fatty-acid--CoA ligase [Amycolicicoccus subflavus DQS3-9A1]
Length=630

 Score =  744 bits (1922),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 366/612 (60%), Positives = 460/612 (76%), Gaps = 6/612 (0%)

Query  19   GKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSARNRAVGARL  78
            G++       LV  VE+ ++    +LAYR++D+S +R+GVA ++ W  F  R RAV  RL
Sbjct  9    GEVILTPEATLVNFVEQHSRNNAGELAYRYVDYSHDREGVAHELTWERFGMRVRAVAGRL  68

Query  79   QQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHAVLDDCAPST  138
            QQV   GDRVAIL PQ LDY+++FF A+++G IAVPLFDP EPGH  RLHAVL DC P  
Sbjct  69   QQVAHKGDRVAILAPQGLDYVVAFFAAVHAGTIAVPLFDPDEPGHTDRLHAVLGDCEPVA  128

Query  139  ILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETVAYLQYTSGST  198
            ILT T SA GVR+F R+R A ERPR+IAVDA+P  V A+W  P  + + +AYLQYTSGST
Sbjct  129  ILTGTKSAAGVRQFFRSRPANERPRIIAVDAIPDSVEASWTLPHPSLDDIAYLQYTSGST  188

Query  199  RIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGHSFTFM  258
            R+P+GV+ITH  + TNV+Q+  +L   E  RGV+WLP FHDMGL+TV+L +  G   T M
Sbjct  189  RVPAGVEITHRAVSTNVLQMCWSLGLNEHSRGVTWLPLFHDMGLLTVILPAFGGKYITIM  248

Query  259  TPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPLDLSNVKGIL  318
            +P AFV+RP RWI+ELA +  +  GTF+AAPNFAFEHAA+RG+P+D E  LDLS+V G++
Sbjct  249  SPRAFVQRPYRWIKELAAE-SDGEGTFAAAPNFAFEHAALRGLPKDGE-ELDLSHVIGLI  306

Query  319  NGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTVIHVDRDEL  378
            NGSEPV+PA+MRKF +AF PYGL  TA+KPSYG+AEATLFVST   DE   V++VDR+EL
Sbjct  307  NGSEPVTPAAMRKFNDAFGPYGLPNTAIKPSYGMAEATLFVSTPHRDEEARVLYVDREEL  366

Query  379  NNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLHGNNLGTGY  438
            N  + + V    P AV QVS G V  S+WA IVDAD+  ELPD ++GEIWL+G+N+G GY
Sbjct  367  NAGKILRVDPSHPKAVPQVSCGYVSTSQWATIVDADSGEELPDERVGEIWLNGDNIGQGY  426

Query  439  WGKEEESAQTFKNILKSRISE-SRAEGAPDDALWVRTGDYGTYFKDHLYIAGRIKDLVII  497
            WG+E E+A+TF+N LK R+ E S A G  +DA W+RTGDYG Y    LYI GR+KDLVI+
Sbjct  427  WGREGETAETFQNKLKVRLQEGSHASGVDEDANWMRTGDYGVYIDGELYITGRVKDLVIV  486

Query  498  DGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLK---FDPEDTSE  554
            DGRNHYPQDLE +AQE++ +LR G+ AAFSV ANQLP+ VFD+ H+GL    FD +D++E
Sbjct  487  DGRNHYPQDLEYSAQEASSSLRPGFVAAFSVSANQLPRAVFDNPHSGLAGSGFDADDSAE  546

Query  555  QLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKIGRRAC  614
            QLV+VGERA G  K D  PI DD+RAAIA  HGVT RDVLLV AG+IPRTSSGKI RRAC
Sbjct  547  QLVVVGERAPGAGKADPGPIADDVRAAIASRHGVTARDVLLVPAGSIPRTSSGKIARRAC  606

Query  615  RAAYLDGSLRSG  626
            +A+Y+DG+LR G
Sbjct  607  KASYIDGTLRGG  618


>gi|326384299|ref|ZP_08205980.1| long-chain-fatty-acid--CoA ligase [Gordonia neofelifaecis NRRL 
B-59395]
 gi|326196897|gb|EGD54090.1| long-chain-fatty-acid--CoA ligase [Gordonia neofelifaecis NRRL 
B-59395]
Length=633

 Score =  731 bits (1888),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 370/623 (60%), Positives = 458/623 (74%), Gaps = 8/623 (1%)

Query  19   GKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSARNRAVGARL  78
            G + F  +  LV +VE+  + + D LAYRFLDFS ERDG   D+ W+ F  R RAV ARL
Sbjct  14   GNLHFEDDVTLVDYVERNVREQADTLAYRFLDFSRERDGERIDLTWAQFGKRLRAVAARL  73

Query  79   QQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHAVLDDCAPST  138
            QQVTQPGDRVAIL PQ+L+Y+I FF +LY+  IAVPLF P EPGH  RL AVL DC PS 
Sbjct  74   QQVTQPGDRVAILAPQSLEYVIGFFASLYASNIAVPLFSPDEPGHTDRLVAVLADCQPSA  133

Query  139  ILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANE---ETVAYLQYTS  195
            ILT+T SAE VR F   R AK+RPRVIAVDAVP  V ATW  P A+    ++VAYLQYTS
Sbjct  134  ILTSTKSAEAVRDFFSDRPAKDRPRVIAVDAVPDSVGATWVPPVADRNSLDSVAYLQYTS  193

Query  196  GSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGHSF  255
            GSTR+P+GV+IT+  +  N +Q+ + +E     RGV+WLP FHDMGL+TV+L ++ G   
Sbjct  194  GSTRVPAGVEITYEAVAANCLQIYDTIEIDRNARGVTWLPMFHDMGLLTVILPALGGRYV  253

Query  256  TFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPLDLSNVK  315
            T M+P AFVRRPGRWIRELA    +   T++AAPNFA+EHAA RG+P + E  LDLSNV 
Sbjct  254  TIMSPQAFVRRPGRWIRELA-AVDDHAPTYAAAPNFAYEHAAARGLPHEGE-SLDLSNVI  311

Query  316  GILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTVIHVDR  375
            G++NGSEPV+ +SMRKF EAFAPYGL   A+KP YG+AEATLFVS T  D    + +VDR
Sbjct  312  GLINGSEPVTVSSMRKFNEAFAPYGLSPKAIKPCYGMAEATLFVSATQRDNEALINYVDR  371

Query  376  DELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLHGNNLG  435
            D+LN   FV V ADA  AVAQVS G+V +S+WAVIVD +T  E PDG++GEIWL+G N+G
Sbjct  372  DKLNQGEFVPVDADAEGAVAQVSCGQVALSQWAVIVDPETGEEQPDGRVGEIWLNGMNIG  431

Query  436  TGYWGKEEESAQTFKN-ILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIAGRIKDL  494
             GYW K+EE+  TF N + K   + S AEGAPDD  W+RTGD+G ++   LYI GR+KDL
Sbjct  432  EGYWNKDEETVATFHNSVAKMLPTGSHAEGAPDDNRWMRTGDFGVWYDGELYITGRVKDL  491

Query  495  VIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFDPEDTSE  554
            VI+DGRNHYPQDLE +AQE++ ALR G+ AAF+VP+NQLP+ VF++ H+GL +D +D SE
Sbjct  492  VIVDGRNHYPQDLEFSAQEASPALRPGFVAAFAVPSNQLPREVFENGHSGLTYDADDASE  551

Query  555  QLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKIGRRAC  614
            QLV+V ER  G  + D Q I D +RAA+A  HGV VRD+LLV AG+IPRTSSGKI RRA 
Sbjct  552  QLVVVAERGPG-RRSDPQEIADIVRAAVAGRHGVMVRDLLLVPAGSIPRTSSGKIARRAT  610

Query  615  RAAYLDGSLRSGVGSPTVFATSD  637
            +AAY+DG+LR G    T F  +D
Sbjct  611  KAAYIDGTLRGGY-QQTAFPDAD  632


>gi|296137924|ref|YP_003645167.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola 
DSM 20162]
 gi|296026058|gb|ADG76828.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola 
DSM 20162]
Length=636

 Score =  719 bits (1856),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 357/613 (59%), Positives = 448/613 (74%), Gaps = 7/613 (1%)

Query  18   NGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSARNRAVGAR  77
            +G I F   T LV  VE+ A+ R D LAYRF+D+S ERDG   ++ W+ F AR RA+GAR
Sbjct  12   DGNIFFRPGTTLVDFVERNARERADTLAYRFIDYSRERDGEVHELTWAQFGARLRAIGAR  71

Query  78   LQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHAVLDDCAPS  137
            LQ +T+  DRVAIL PQ LDY+ +FFGALY+G IAVPLF P EPGH  RL  VL+DC P+
Sbjct  72   LQHITKREDRVAILAPQGLDYVTAFFGALYAGNIAVPLFSPDEPGHTDRLRIVLEDCKPT  131

Query  138  TILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETVAYLQYTSGS  197
             ILT++ SAE  R F R   AKERPR+IAVDA+P  V +T +      +T+AYLQYTSGS
Sbjct  132  AILTSSGSAEACRNFFRHLPAKERPRIIAVDAIPDSVGSTLKPFPIYRDTIAYLQYTSGS  191

Query  198  TRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGHSFTF  257
            TR P+GVQIT+  + TNV+Q+++AL+  E  RGV+WLP FHDMGL+TV+L ++ G   T 
Sbjct  192  TRNPAGVQITYEAVGTNVIQMIHALDLNENSRGVTWLPMFHDMGLLTVILPALGGKFITI  251

Query  258  MTPAAFVRRPGRWIRELARKPGETGG-TFSAAPNFAFEHAAVRGVPRDDEPPLDLSNVKG  316
            M+P+AFVRRPGRWI ELA    E G  TF+AAPNFA+EHAA RG+P++ E  LDLSNVKG
Sbjct  252  MSPSAFVRRPGRWINELAAV--EDGAETFAAAPNFAYEHAAARGLPKEGE-TLDLSNVKG  308

Query  317  ILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTVIHVDRD  376
            ++NGSEPV+ +SM+KF +AFAPYGL   A+KP YG+AEATLFVS+TP++    V++VDRD
Sbjct  309  LINGSEPVTVSSMKKFNDAFAPYGLSPKAIKPCYGMAEATLFVSSTPVENEARVVYVDRD  368

Query  377  ELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLHGNNLGT  436
             L    FV    +A  AV QVS G V +S+WA IVD +T  ELPD  +GEIWLHG N+G+
Sbjct  369  SLAAGTFVVADENAEGAVPQVSCGDVALSQWACIVDPETGKELPDDSVGEIWLHGMNIGS  428

Query  437  GYWGKEEESAQTFKNILKSRISESRAEGAP--DDALWVRTGDYGTYFKDHLYIAGRIKDL  494
            GYW + EES +TF+N +      + + G    + A W+RTGD+G Y    LYI GR+KDL
Sbjct  429  GYWERAEESRETFQNYVTPLSEGTHSAGVKNLEKARWLRTGDFGVYHDGELYITGRVKDL  488

Query  495  VIIDGRNHYPQDLECTAQES-TKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFDPEDTS  553
            VI+DGRNHYPQD+E TAQES TK +R GY AAFSVPAN+LPQ VF+++H+GL +DP D S
Sbjct  489  VIVDGRNHYPQDIEFTAQESNTKYIRTGYLAAFSVPANELPQAVFENAHSGLTYDPNDQS  548

Query  554  EQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKIGRRA  613
            EQLVIV E  AG  K D Q + D IR+A+   HGV  RD+LLV  G++PRTSSGKI RRA
Sbjct  549  EQLVIVAELGAGGAKQDQQALADGIRSAVGAAHGVLARDILLVPGGSLPRTSSGKIARRA  608

Query  614  CRAAYLDGSLRSG  626
             RAAY+DG+LR G
Sbjct  609  GRAAYIDGTLRGG  621


>gi|296395147|ref|YP_003660031.1| AMP-dependent synthetase and ligase [Segniliparus rotundus DSM 
44985]
 gi|296182294|gb|ADG99200.1| AMP-dependent synthetase and ligase [Segniliparus rotundus DSM 
44985]
Length=638

 Score =  692 bits (1786),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 336/617 (55%), Positives = 443/617 (72%), Gaps = 3/617 (0%)

Query  11   YHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSAR  70
            +H      G+I  P +  +   V+   +  G+K+AYRF+++S  R+G A +ILW +   +
Sbjct  5    WHEALDERGRIHLPPDARMQNFVDWTLERAGEKVAYRFMNYSRVREGEATEILWREVGVK  64

Query  71   NRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHAV  130
             +A+ ARLQQV +PGDRVAIL PQ+++Y+++FFG  Y+G+I+VPLFDP  PG   RLH +
Sbjct  65   VKAIAARLQQVGEPGDRVAILAPQSIEYVLAFFGIGYAGQISVPLFDPEAPGLGERLHLI  124

Query  131  LDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETVAY  190
            + DC P TILTTT  A   R   +   A +RPR+IA+DA+P  V   +   E ++E +AY
Sbjct  125  MGDCHPKTILTTTAGAARARNLFKDVPANQRPRIIAIDAIPDAVGEMYTPVEPDQEDIAY  184

Query  191  LQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASV  250
            LQYTSGSTR P+GV+I++    +NV+Q+++A+E     R ++WLP FHDMGL+ +++ ++
Sbjct  185  LQYTSGSTRTPAGVEISYRAAMSNVLQMIDAIELSTNTRAITWLPMFHDMGLLHIIIPAL  244

Query  251  LGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPLD  310
            +G   T M+PAAFV+RP RWIR LA   G    TF+AAPNFAFEHAA RG+P++ E  LD
Sbjct  245  VGGEITIMSPAAFVQRPYRWIRLLAED-GTGMKTFAAAPNFAFEHAAARGLPKEGE-SLD  302

Query  311  LSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTV  370
            LSNV G++NGSEPV  +SMRKF+ AFAPYGL++ A+KPSYG+AEATLFVSTTP D    V
Sbjct  303  LSNVIGLVNGSEPVQVSSMRKFYNAFAPYGLRKEAIKPSYGMAEATLFVSTTPFDNEARV  362

Query  371  IHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLH  430
            I+VDR+EL   R V V   AP AV QVS GKV  SEWAVIVD +T  E  D  +GEIWL 
Sbjct  363  IYVDREELGAGRVVRVPQTAPGAVPQVSCGKVARSEWAVIVDPETGDEREDNHVGEIWLS  422

Query  431  GNNLGTGYWGKEEESAQTFKNILKSRISE-SRAEGAPDDALWVRTGDYGTYFKDHLYIAG  489
            G N+G+GYW + EE+  TF+N L   + + S +EG  ++  W+RTGDYG Y    LYI G
Sbjct  423  GPNIGSGYWNRPEETKATFQNQLGKTLPQGSHSEGTDENDQWMRTGDYGVYVDGELYITG  482

Query  490  RIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFDP  549
            R+KD++I+DGRNHYPQD+E TA  +  ALR GY AAFSVPAN+LP  VFDD+H+G+ FD 
Sbjct  483  RMKDMIIVDGRNHYPQDIERTAWTANPALRSGYVAAFSVPANELPAVVFDDAHSGISFDK  542

Query  550  EDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKI  609
            +D SEQLVIV ERAAG HK + QPI+D +RAA+A+ HGVT R++LLV AG++PRTSSGKI
Sbjct  543  DDRSEQLVIVAERAAGHHKDELQPILDSVRAAVALHHGVTPREILLVPAGSVPRTSSGKI  602

Query  610  GRRACRAAYLDGSLRSG  626
              RA R  YLDG+LR G
Sbjct  603  AHRAARKEYLDGTLRRG  619


>gi|339296608|gb|AEJ48719.1| fatty-acid-CoA ligase fadD32 [Mycobacterium tuberculosis CCDC5079]
Length=356

 Score =  691 bits (1784),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 338/338 (100%), Positives = 338/338 (100%), Gaps = 0/338 (0%)

Query  300  GVPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFV  359
            GVPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFV
Sbjct  19   GVPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFV  78

Query  360  STTPMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASEL  419
            STTPMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASEL
Sbjct  79   STTPMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASEL  138

Query  420  PDGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGT  479
            PDGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGT
Sbjct  139  PDGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGT  198

Query  480  YFKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFD  539
            YFKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFD
Sbjct  199  YFKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFD  258

Query  540  DSHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAG  599
            DSHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAG
Sbjct  259  DSHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAG  318

Query  600  TIPRTSSGKIGRRACRAAYLDGSLRSGVGSPTVFATSD  637
            TIPRTSSGKIGRRACRAAYLDGSLRSGVGSPTVFATSD
Sbjct  319  TIPRTSSGKIGRRACRAAYLDGSLRSGVGSPTVFATSD  356


>gi|317509112|ref|ZP_07966739.1| AMP-binding enzyme [Segniliparus rugosus ATCC BAA-974]
 gi|316252583|gb|EFV12026.1| AMP-binding enzyme [Segniliparus rugosus ATCC BAA-974]
Length=638

 Score =  689 bits (1779),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 336/617 (55%), Positives = 438/617 (71%), Gaps = 3/617 (0%)

Query  11   YHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSAR  70
            +H      G+I  P +  +   V       G+ +AYR++D+S  +DG  ++ILW +   +
Sbjct  5    WHEALDERGRIHLPPDARMQNFVSWTLDRAGENVAYRYVDYSHNKDGDFQEILWKEVGVK  64

Query  71   NRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHAV  130
             +A+ ARLQQV   GDRVAIL PQ ++Y++ FF   Y+G+I+VPLFDP EPG   RLH +
Sbjct  65   VKAIAARLQQVGDIGDRVAILAPQGIEYVLGFFATSYAGQISVPLFDPEEPGLGQRLHLI  124

Query  131  LDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETVAY  190
            + DC P TILTTT +A   R   R   A +RPR+IA+DAVP  V+  + Q E +   +AY
Sbjct  125  MGDCHPRTILTTTAAAGRARDLFRDVPAAKRPRIIAIDAVPDSVSEMYTQVEPDVNDIAY  184

Query  191  LQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASV  250
            LQYTSGSTR P+GV+I++    TNV+Q+++A+E     R ++WLP FHDMGL+ +++ ++
Sbjct  185  LQYTSGSTRTPAGVEISYRAAMTNVLQMIDAIELSTNTRAITWLPMFHDMGLLHIIIPAL  244

Query  251  LGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPLD  310
            +G   T M+P AFV+RP RWI+ LA   G    TF+AAPNFAFEHAA RG+P++ E  LD
Sbjct  245  VGQQITIMSPRAFVQRPHRWIKLLAED-GTGMKTFAAAPNFAFEHAATRGLPKEGE-HLD  302

Query  311  LSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTV  370
            LSNV G++NGSEPV  +SM+KF++AF+PYGL + A+KPSYG+AEATLFVSTTP D    V
Sbjct  303  LSNVIGLINGSEPVQVSSMKKFYDAFSPYGLPKEAIKPSYGMAEATLFVSTTPFDNEARV  362

Query  371  IHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLH  430
            I+VDR+ L   R V+V    P A+ QVS GKV  SEWAVIVD +T  E  D  IGEIWL 
Sbjct  363  IYVDREALGEGRIVKVPKTNPGAIPQVSCGKVARSEWAVIVDPETGDEREDNYIGEIWLS  422

Query  431  GNNLGTGYWGKEEESAQTFKNILKSRISE-SRAEGAPDDALWVRTGDYGTYFKDHLYIAG  489
            G N+G+GYW + EES +TFKN L  R+ E SRAEG  ++ LW+RTGDYG Y  + LYI G
Sbjct  423  GPNMGSGYWNRPEESKETFKNQLGKRLPEGSRAEGTDENDLWMRTGDYGVYIDNELYITG  482

Query  490  RIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFDP  549
            RIKD++I+DGRNHYPQD+E TA  +  ALR GY AAFSVPAN+LP+ VF D+ +G+ FD 
Sbjct  483  RIKDMIIVDGRNHYPQDIEHTAWTANPALRTGYVAAFSVPANELPEAVFQDARSGIAFDK  542

Query  550  EDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKI  609
            +D SEQLVIV ERAAG HK + QPI+D +RAA+A+ HGVT RD+LLV AG++PRTSSGKI
Sbjct  543  DDRSEQLVIVAERAAGHHKDELQPILDSVRAAVALHHGVTARDILLVPAGSVPRTSSGKI  602

Query  610  GRRACRAAYLDGSLRSG  626
              RA R  YLDG+ R G
Sbjct  603  AHRAARKEYLDGTTRRG  619


>gi|319948776|ref|ZP_08022893.1| long-chain-fatty-acid--CoA ligase [Dietzia cinnamea P4]
 gi|319437552|gb|EFV92555.1| long-chain-fatty-acid--CoA ligase [Dietzia cinnamea P4]
Length=648

 Score =  672 bits (1735),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 352/643 (55%), Positives = 440/643 (69%), Gaps = 39/643 (6%)

Query  11   YHNPFIVNGKIRFPANTNLVRHVEKWAKVRG-------DKLAYRFLDFSTERDGVARDIL  63
            YH+     G I  P  T LV  VE  A V         D L YR++D+S+ RDG   ++ 
Sbjct  6    YHD---AGGAIVIPDRTTLVDFVE--ANVSAARQDPAHDGLVYRYIDYSSSRDGEVHELS  60

Query  64   WSDFSARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGH  123
            W+ F  R  A+ ARLQQV +PGDRVAIL PQ LDY++SFF A+ +G IAVPLFDP EPGH
Sbjct  61   WTRFGERLYAIAARLQQVAKPGDRVAILAPQGLDYIVSFFAAIQAGLIAVPLFDPDEPGH  120

Query  124  VGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEA  183
              RLHAVL DCAP+ ILT+T+SA GVRK  R   A+ERPR +AVDA+P E+ + W +P+ 
Sbjct  121  HDRLHAVLGDCAPAVILTSTESAAGVRKLFRELPARERPRTVAVDAIPDELGSGWSRPDL  180

Query  184  NEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLI  243
              + +AYLQYTSGSTR+P+GV+ITH N+ TNV+Q+ + L      RGV+WLP FHDMGL+
Sbjct  181  GADDIAYLQYTSGSTRVPAGVEITHRNVVTNVMQLFDGLGLTRSSRGVTWLPLFHDMGLL  240

Query  244  TVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPR  303
            TV+L ++ G + T M+P AFV+RPGRW+ +L  + G   G F+AAPNFAFEHAA RG+P+
Sbjct  241  TVILPAMGGATITVMSPRAFVQRPGRWVTQLGAQSG-CDGVFAAAPNFAFEHAARRGLPK  299

Query  304  DDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTP  363
            + E  LDLS V  I+NGSEPV+PASMR F EAFAPYGL  T +KPSYG+AEATLFVS+  
Sbjct  300  EGE-TLDLSGVTSIINGSEPVTPASMRAFNEAFAPYGLAPTVIKPSYGMAEATLFVSSPR  358

Query  364  MDEVPTVIHVDRDELNNQRFV-----EVAADAPNAVAQVSAGKVGVSEWAVIVDAD----  414
             D+   VIHVDR +LN          EV  +  NA+ QV+ G V  S+WA IV+A+    
Sbjct  359  RDDEAIVIHVDRSDLNRGVITVLDPSEVEGNE-NAIPQVACGYVAPSQWAAIVEANIDEA  417

Query  415  ------TASELPDGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISES----RAEG  464
                  T  ELP+G++GEIWLHG N+G  YWG+ EES  TF N L  R+ E     R  G
Sbjct  418  TGEHDGTGRELPEGRVGEIWLHGTNVGRAYWGRPEESEATFGNRLVERLEEGSKTVREFG  477

Query  465  A-PDDALWVRTGDYGTYFKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYA  523
              P+DA W+RTGDYG Y    LYI GR+KDLVI+ GRNHYPQDLE TAQ ++ ALR G+ 
Sbjct  478  TVPEDARWLRTGDYGAYVDGQLYITGRVKDLVIVAGRNHYPQDLENTAQSASDALRPGFV  537

Query  524  AAFSVPANQLPQTVFDDSHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIA  583
            AAFSVPANQLP     D+  G     +D+SE LV+V ERA G  K D  P+ + +R+AI+
Sbjct  538  AAFSVPANQLPI----DARNGADIAADDSSETLVVVAERAPGAGKADPGPVAEAVRSAIS  593

Query  584  VGHGVTVRDVLLVSAGTIPRTSSGKIGRRACRAAYLDGSLRSG  626
              HGVT +DVLLV AG+IPRTSSGKI R AC+ AY+DG+LR G
Sbjct  594  ARHGVTAQDVLLVPAGSIPRTSSGKIARGACKTAYVDGTLRGG  636


>gi|169628267|ref|YP_001701916.1| long-chain-fatty-acid--CoA ligase [Mycobacterium abscessus ATCC 
19977]
 gi|169240234|emb|CAM61262.1| Probable acyl-CoA synthase FadD [Mycobacterium abscessus]
Length=619

 Score =  632 bits (1630),  Expect = 6e-179, Method: Compositional matrix adjust.
 Identities = 325/609 (54%), Positives = 417/609 (69%), Gaps = 14/609 (2%)

Query  17   VNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSARNRAVGA  76
            V+G I  P  + L+ + E+     G   AYR+LDF+ + DGVA ++ W + + R RA+GA
Sbjct  24   VDGLIDLPPGSTLLSNFERNIAEFGSTAAYRYLDFTRDDDGVAIELSWDELNTRMRAIGA  83

Query  77   RLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHAVLDDCAP  136
            RLQQVT PGDRVAIL PQ LDY+I FF A+ +G IAVPLF P  PGH  RL AVL D  P
Sbjct  84   RLQQVTAPGDRVAILAPQGLDYVIGFFAAIQAGNIAVPLFAPELPGHAERLDAVLADATP  143

Query  137  STILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETVAYLQYTSG  196
            S ILTT  +AE V  F+R      RPRVIA+DAVP  V AT+       + +AYLQYTSG
Sbjct  144  SVILTTDGAAESVNAFLRKLPRARRPRVIAIDAVPDAVGATFVPAALATDDLAYLQYTSG  203

Query  197  STRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGHSFT  256
            STR P+GVQITH    TNV+Q++ A       R VSWLP +HDMGLI +L   + G   T
Sbjct  204  STRTPAGVQITHRAACTNVLQMILAGGLDMDIRSVSWLPLYHDMGLIMILFPPLCGGHIT  263

Query  257  FMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPLDLSNVKG  316
             M+P AFVRRP RWI++LA +    G  F+AAPNFAF+ AA RG+P   E   DLSNV G
Sbjct  264  LMSPLAFVRRPRRWIKQLATE-SAYGRVFAAAPNFAFDLAAQRGLPPAGE-TWDLSNVAG  321

Query  317  ILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTVIHVDRD  376
            +LNGSEPV+ A++ KF +AFAPYG   +A+KPSYG+AEATL V+T  + + P+VI++DR+
Sbjct  322  LLNGSEPVTIAAIEKFTDAFAPYGFPPSAIKPSYGMAEATLSVATIGIQDRPSVIYLDRE  381

Query  377  ELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLHGNNLGT  436
            +L   R V V+A+AP AV  VS G+V  S+W VIVD  T +ELP+G+IGEIWLHG+N+G 
Sbjct  382  QLAEDRAVPVSAEAPTAVPHVSCGQVIASQWLVIVDPRTGAELPEGEIGEIWLHGDNIGA  441

Query  437  GYWGKEEESAQTFKNILKSRI-SESRAEGAPDDALWVRTGDYGTYFKDHLYIAGRIKDLV  495
            GYWG+  E+A TF N L SR+ + S A G  +D+ W+RTGD G Y  ++LY+ GRIKDLV
Sbjct  442  GYWGRPRETASTFHNRLHSRLDNNSHATGTAEDSRWLRTGDLGVYLNNNLYVTGRIKDLV  501

Query  496  IIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFDPEDTSEQ  555
            IIDGRNHYPQD+E TA +++ A+R GY AAF V ANQL +               DTSE+
Sbjct  502  IIDGRNHYPQDIEATASQASPAVRSGYVAAFPVAANQLAEAAI-----------ADTSER  550

Query  556  LVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKIGRRACR  615
            LVIV ERA G+ +++  P+++ IRAAI+  H + V D+ LV+AG IPRT+SGK+ RRAC+
Sbjct  551  LVIVAERAPGSGRVEQAPVIEAIRAAISRTHALPVADIRLVAAGAIPRTTSGKLARRACQ  610

Query  616  AAYLDGSLR  624
              YL G  R
Sbjct  611  TEYLAGMYR  619


>gi|118473450|ref|YP_888578.1| fatty-acid--CoA ligase [Mycobacterium smegmatis str. MC2 155]
 gi|118174737|gb|ABK75633.1| acyl-CoA synthase [Mycobacterium smegmatis str. MC2 155]
Length=594

 Score =  620 bits (1599),  Expect = 3e-175, Method: Compositional matrix adjust.
 Identities = 326/606 (54%), Positives = 407/606 (68%), Gaps = 31/606 (5%)

Query  18   NGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSARNRAVGAR  77
            +G I  P    L  + ++      D  AYR+LDF  E DG   ++ W +   R RAVGAR
Sbjct  10   DGNIAIPDGVTLTSYFDRNVAELADTPAYRYLDF--EHDGRVVELTWKELDTRVRAVGAR  67

Query  78   LQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHAVLDDCAPS  137
            LQQVT+ GDRVAILCPQ +DY++SFF A+ +G IAVPLF P  PGH  RL AVL D  PS
Sbjct  68   LQQVTKLGDRVAILCPQGVDYVVSFFAAIQAGAIAVPLFSPELPGHAERLEAVLADATPS  127

Query  138  TILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETVAYLQYTSGS  197
             +LTTT +AE V  F+R      RPR+IAVDAVP  V AT+   + + + +AYLQYTSGS
Sbjct  128  VVLTTTAAAEAVGAFVRKLPHAGRPRMIAVDAVPAAVGATFTPAQLHTDGIAYLQYTSGS  187

Query  198  TRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGHSFTF  257
            TR P+GV+ITH  + TNV+Q++ ++      R VSWLP FHDMGL+ ++  ++ G   T 
Sbjct  188  TRTPAGVEITHRGVCTNVLQMIISVGLDWNIRSVSWLPLFHDMGLLMIMFPALCGGHITL  247

Query  258  MTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGV-PRDDEPPLDLSNVKG  316
            M+P +FVRRP RWI+EL         TF+AAPNFA+E AA RG+ P  DE  LDLSNV G
Sbjct  248  MSPVSFVRRPYRWIKELG---ASDVPTFAAAPNFAYELAAHRGLPPAGDE--LDLSNVAG  302

Query  317  ILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTVIHVDRD  376
            ++NGSEPVS AS+  F EAFAPYGL  TAVKPSYG+AEATLFVST      P+ +++DR+
Sbjct  303  LINGSEPVSMASINVFNEAFAPYGLPPTAVKPSYGMAEATLFVSTIGPAAHPSAVYLDRE  362

Query  377  ELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVD--ADTASELPDGQIGEIWLHGNNL  434
            EL   R VEV  D P A+AQVS GK+  S+WAVIVD  +DT +ELPDG +GEIWL+G+N+
Sbjct  363  ELGAGRAVEVPEDDPRAIAQVSCGKIARSQWAVIVDPNSDTGAELPDGHVGEIWLYGDNV  422

Query  435  GTGYWGKEEESAQTFKNILKSRISE-SRAEGAPDDALWVRTGDYGTYFKDHLYIAGRIKD  493
            G GYWG+  E+  +F N L+SR+ + S A GAPD A W RTGD G Y    LYI GRIKD
Sbjct  423  GKGYWGRPHETEVSFHNKLQSRLPQGSHAAGAPDGAAWFRTGDLGMYLGGELYITGRIKD  482

Query  494  LVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFDPEDTS  553
            +VI+DGRNHYPQDLE T  E++  +R GY AAFSVP+                       
Sbjct  483  MVIVDGRNHYPQDLEATVAEASSQVRAGYIAAFSVPSEH--------------------G  522

Query  554  EQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKIGRRA  613
            E+LVIV ERA G  + D  PIVD IRAAI+  H V V D+ LV+AG+IPRT+SGK+ RRA
Sbjct  523  ERLVIVAERAPGAGRADPAPIVDAIRAAISKRHAVAVHDIKLVAAGSIPRTTSGKLARRA  582

Query  614  CRAAYL  619
            C+A YL
Sbjct  583  CQAQYL  588


>gi|169629003|ref|YP_001702652.1| long-chain-fatty-acid--CoA ligase [Mycobacterium abscessus ATCC 
19977]
 gi|169240970|emb|CAM61998.1| Probable fatty-acid-coa ligase FadD [Mycobacterium abscessus]
Length=600

 Score =  616 bits (1589),  Expect = 3e-174, Method: Compositional matrix adjust.
 Identities = 319/607 (53%), Positives = 415/607 (69%), Gaps = 23/607 (3%)

Query  18   NGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSARNRAVGAR  77
             G I  P    +  ++E+  +  GD  AYR+LDF+   DG   D+ W+    R+RAV AR
Sbjct  12   KGAITLPDGYTVNYYLERAVEELGDTFAYRYLDFNANSDGEPNDLNWTQLGQRSRAVAAR  71

Query  78   LQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHAVLDDCAPS  137
            LQQVT+PGDRVAIL PQ +DY++ FF A+ +G IAVPLF P  PGH  RL AVL D  P+
Sbjct  72   LQQVTKPGDRVAILAPQGIDYVVGFFAAIEAGNIAVPLFAPELPGHSERLDAVLTDAQPT  131

Query  138  TILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETVAYLQYTSGS  197
             +LT   +AE V +F+R      RPRV+AVD+VP  VAAT+ +   + + +AYLQYTSGS
Sbjct  132  VVLTNNAAAESVSRFVRGLPRDRRPRVVAVDSVPDSVAATYAKVTPDTDDIAYLQYTSGS  191

Query  198  TRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGHSFTF  257
            TR+P+GV+ITH  + TNV+Q++ ++   +  R VSWLP +HDMGL+ +L   + G   T 
Sbjct  192  TRVPAGVEITHRAVMTNVLQMIISVGLDDSIRSVSWLPLYHDMGLLMILF-PLCGGRITL  250

Query  258  MTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPLDLSNVKGI  317
            M+P +FVRRPGRWI+ELA + G  G TF+AAPNFAFE AA RG+P+D E  LDLSNV G+
Sbjct  251  MSPVSFVRRPGRWIKELAAE-GHLGRTFAAAPNFAFELAAERGLPKDGE-ELDLSNVAGL  308

Query  318  LNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTVIHVDRDE  377
            +NGSEPVS +S+RKF +AF PYGL  T +KPSYG+AEATLFVST P D   +V+++DR  
Sbjct  309  INGSEPVSISSIRKFNDAFGPYGLPPTTIKPSYGMAEATLFVSTIPSDAEASVVYLDRRA  368

Query  378  LNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLHGNNLGTG  437
            L +   V V AD  NAV QVS GK+  S+WAVIV+ +  +EL DG++GEIWLHG+N+G G
Sbjct  369  LGDGHAVRVEADDENAVPQVSCGKIARSQWAVIVNPNADTELADGEVGEIWLHGDNIGRG  428

Query  438  YWGKEEESAQTFKNILKSRISE-SRAEGAPDDALWVRTGDYGTYFKDHLYIAGRIKDLVI  496
            YWG+ +E+  +F+N L++R+   S A G    A W RTGD G Y    LYI GR+KDLVI
Sbjct  429  YWGRPKETDFSFRNKLQARLDHGSHATGTEPGATWFRTGDLGVYLDGELYITGRVKDLVI  488

Query  497  IDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFDPEDTSEQL  556
            IDGRNHYPQD+E T +E++ A+R G+ AAFSVPA                   E + EQL
Sbjct  489  IDGRNHYPQDIEATVEEASPAVRRGFVAAFSVPA-------------------EGSGEQL  529

Query  557  VIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKIGRRACRA  616
            VIV ERAAG  + + +PI+D IRAA++  H + + DV LV AG IPRT+SGK+ RRACR 
Sbjct  530  VIVAERAAGAGRAEPEPIIDAIRAAVSRRHNLPIADVQLVQAGAIPRTTSGKLARRACRQ  589

Query  617  AYLDGSL  623
             YLD  L
Sbjct  590  EYLDNKL  596


>gi|120404573|ref|YP_954402.1| putative fatty-acid--CoA ligase [Mycobacterium vanbaalenii PYR-1]
 gi|119957391|gb|ABM14396.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii 
PYR-1]
Length=593

 Score =  593 bits (1528),  Expect = 4e-167, Method: Compositional matrix adjust.
 Identities = 311/607 (52%), Positives = 399/607 (66%), Gaps = 28/607 (4%)

Query  18   NGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSARNRAVGAR  77
             G I  PA   L   + +     G+  AYR+LDF  +      ++ W+   AR  AVGAR
Sbjct  14   EGNIAIPAGVTLTAFLARNVAELGEAPAYRYLDFDHD---CTVELSWTQLGARLSAVGAR  70

Query  78   LQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHAVLDDCAPS  137
            LQQVTQ GDRVA+L PQ ++Y++ FF A+ +G IAVPLF P  PGH  RL AVL D  PS
Sbjct  71   LQQVTQRGDRVAVLTPQGVEYVVGFFAAILAGAIAVPLFAPELPGHTDRLDAVLKDAEPS  130

Query  138  TILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETVAYLQYTSGS  197
             +LTTT +A+ VR FIR      RPR+IAVDAVP  V   +       + +AYLQYTSGS
Sbjct  131  VVLTTTAAAQPVRDFIRKLPRDRRPRIIAVDAVPDSVGTDFTPAPLQTDDIAYLQYTSGS  190

Query  198  TRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGHSFTF  257
            TR P+GV+ITH +  TN+VQ++ ++      + VSWLP FHDMGL+ ++  +V G   T 
Sbjct  191  TRAPAGVEITHRSACTNIVQMVLSVGLDPDIQSVSWLPLFHDMGLLMIMFPAVAGGHLTL  250

Query  258  MTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPLDLSNVKGI  317
            M+P AFVRRP RWI+EL         TF+AAPNFAFE AA RG+P   +  LDLSNV G+
Sbjct  251  MSPVAFVRRPYRWIKELG---ATDAPTFAAAPNFAFELAAERGLPPAGD-TLDLSNVAGL  306

Query  318  LNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTVIHVDRDE  377
            +NGSEPV+ +S+ KF  AFAPYGL  T VKPSYG+AEATLFVSTT  D  P   ++DR++
Sbjct  307  INGSEPVNISSVEKFNAAFAPYGLAPTVVKPSYGMAEATLFVSTTAPDARPEATYLDREK  366

Query  378  LNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLHGNNLGTG  437
            L     V V    P+AVAQVS G V  S+WA IVD  T +E PDG++GEIWLHG+N+G G
Sbjct  367  LTVGHAVRVDPGHPDAVAQVSCGTVSRSQWAAIVDPGTETEQPDGRVGEIWLHGDNIGRG  426

Query  438  YWGKEEESAQTFKNILKSRI-SESRAEGAPDDALWVRTGDYGTYFKDHLYIAGRIKDLVI  496
            YWG+ +E+  TF+N L++R+ + S A   P++ALW+RTGD G Y    LYI GRIKDLVI
Sbjct  427  YWGRPKETELTFQNKLQARLPAGSHAANCPENALWLRTGDLGVYLDGQLYITGRIKDLVI  486

Query  497  IDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFDPEDTSEQL  556
            +DGRNHYPQD+E TA E++ ++R G+ AAFSVP                     D  E+ 
Sbjct  487  VDGRNHYPQDIEATAGEASTSVRSGFVAAFSVPG--------------------DGREEA  526

Query  557  VIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKIGRRACRA  616
            VIV ERA G  + +  PI + IRAA++  H + V+DV LV+AG IPRT+SGK+ R+ACRA
Sbjct  527  VIVAERAPGAGRAEAAPIQESIRAAVSRRHALPVKDVKLVAAGVIPRTTSGKLARQACRA  586

Query  617  AYLDGSL  623
            AYL+G L
Sbjct  587  AYLNGEL  593


>gi|145223488|ref|YP_001134166.1| putative fatty-acid--CoA ligase [Mycobacterium gilvum PYR-GCK]
 gi|145215974|gb|ABP45378.1| AMP-dependent synthetase and ligase [Mycobacterium gilvum PYR-GCK]
Length=593

 Score =  587 bits (1513),  Expect = 2e-165, Method: Compositional matrix adjust.
 Identities = 319/607 (53%), Positives = 405/607 (67%), Gaps = 28/607 (4%)

Query  18   NGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSARNRAVGAR  77
             G I  P  T L   + + A   GD  AYR+LDF  +R     ++ W+    R  AVGAR
Sbjct  14   EGNIVIPPGTTLTSFLGRNAAEFGDTPAYRYLDFEHDR---TIELTWAQLRTRLDAVGAR  70

Query  78   LQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHAVLDDCAPS  137
            LQQVT+PGDRVAIL PQ ++Y+I FF A+ +G IAVPLF P  PGH  RLHAVL D  PS
Sbjct  71   LQQVTRPGDRVAILTPQGVEYVIGFFAAIEAGAIAVPLFAPELPGHSERLHAVLADAQPS  130

Query  138  TILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETVAYLQYTSGS  197
             +LTTT +AE VR+F+RA     RPR+IAVDAVP  V   +Q+     + VAYLQYTSGS
Sbjct  131  VVLTTTATAEPVREFLRALPHNRRPRLIAVDAVPDSVGVGFQRAPLQTDDVAYLQYTSGS  190

Query  198  TRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGHSFTF  257
            TR P+GV+ITH +  TNVVQ++ ++        VSWLP FHDMGL+ ++  ++ G   T 
Sbjct  191  TRAPAGVKITHRSACTNVVQMVLSVGLDPDINSVSWLPLFHDMGLLMIMFPALAGGYLTL  250

Query  258  MTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPLDLSNVKGI  317
            M+P AFVRRP RWI+EL     +    F+AAPNFAF  AA RG+P + E  LDLSNV G+
Sbjct  251  MSPVAFVRRPYRWIKELG---ADDRPMFAAAPNFAFALAAQRGLPPEGE-ELDLSNVAGL  306

Query  318  LNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTVIHVDRDE  377
            +NGSEP+S A++  F  AFAPYGLKQT +KPSYG+AEATLFVSTTP D     ++VDR +
Sbjct  307  INGSEPISVAAVEAFNAAFAPYGLKQTVIKPSYGMAEATLFVSTTPPDSALKAVYVDRKQ  366

Query  378  LNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLHGNNLGTG  437
            L   R V V +D P+A  QVS G V  S+WAVIVD  T  ELPDG +GEIWLHG+N+G G
Sbjct  367  LTAGRAVIVDSDHPDATVQVSCGNVARSQWAVIVDPATDCELPDGCVGEIWLHGDNIGNG  426

Query  438  YWGKEEESAQTFKNILKSRISE-SRAEGAPDDALWVRTGDYGTYFKDHLYIAGRIKDLVI  496
            YW + EE+  TF+N L+SR++  S AE + D ALW+RTGD G Y    LYI GRIKDL+I
Sbjct  427  YWERPEETELTFRNKLQSRLARGSHAERSADSALWLRTGDLGVYLDGELYITGRIKDLII  486

Query  497  IDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFDPEDTSEQL  556
            +DGRNHYPQD+E TA  ++ ++R G+ AAFSVP                     +  E++
Sbjct  487  VDGRNHYPQDIEATAAAASPSVRAGFVAAFSVPG--------------------EGREEV  526

Query  557  VIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKIGRRACRA  616
            VIV ERA G  + +  PI + IRA ++  H + VRDV LV +G IPRT+SGK+ RR+CRA
Sbjct  527  VIVAERAPGAGRAEAAPIQEAIRAEVSRKHAIPVRDVKLVRSGVIPRTTSGKLARRSCRA  586

Query  617  AYLDGSL  623
            +YLDG+L
Sbjct  587  SYLDGTL  593


>gi|315443847|ref|YP_004076726.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium 
sp. Spyr1]
 gi|315262150|gb|ADT98891.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium 
sp. Spyr1]
Length=593

 Score =  586 bits (1510),  Expect = 4e-165, Method: Compositional matrix adjust.
 Identities = 318/607 (53%), Positives = 405/607 (67%), Gaps = 28/607 (4%)

Query  18   NGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSARNRAVGAR  77
             G I  P  T L   + + A   GD  AYR+LDF  +R     ++ W+    R  AVGAR
Sbjct  14   EGNIVIPPGTTLTSFLGRNAAEFGDTPAYRYLDFEHDR---TIELTWAQLRTRLDAVGAR  70

Query  78   LQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHAVLDDCAPS  137
            LQQVT+PGDRVAIL PQ ++Y+I FF A+ +G IAVPLF P  PGH  RLHAVL D  PS
Sbjct  71   LQQVTRPGDRVAILTPQGVEYVIGFFAAIEAGAIAVPLFAPELPGHSERLHAVLADAQPS  130

Query  138  TILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETVAYLQYTSGS  197
             +LTTT +AE VR+F+RA     RPR+IAVDAVP  V   +Q+     + VAYLQYTSGS
Sbjct  131  VVLTTTATAEPVREFLRALPHNRRPRLIAVDAVPDSVGVGFQRAPLQTDDVAYLQYTSGS  190

Query  198  TRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGHSFTF  257
            TR P+GV+ITH +  TNVVQ++ ++        VSWLP FHDMGL+ ++  ++ G   T 
Sbjct  191  TRAPAGVKITHRSACTNVVQMVLSVGLDPDINSVSWLPLFHDMGLLMIMFPALAGGYLTL  250

Query  258  MTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPLDLSNVKGI  317
            M+P +FVRRP RWI+EL     +    F+AAPNFAF  AA RG+P + E  LDLSNV G+
Sbjct  251  MSPVSFVRRPYRWIKELG---ADDRPMFAAAPNFAFALAAQRGLPPEGE-ELDLSNVAGL  306

Query  318  LNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTVIHVDRDE  377
            +NGSEP+S A++  F  AFAPYGLKQT +KPSYG+AEATLFVSTTP D     ++VDR +
Sbjct  307  INGSEPISVAAVEAFNAAFAPYGLKQTVIKPSYGMAEATLFVSTTPPDSALKAVYVDRKQ  366

Query  378  LNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLHGNNLGTG  437
            L   R V V +D P+A  QVS G V  S+WAVIVD  T  ELPDG +GEIWLHG+N+G G
Sbjct  367  LTAGRAVIVDSDHPDATVQVSCGNVARSQWAVIVDPATDCELPDGCVGEIWLHGDNIGNG  426

Query  438  YWGKEEESAQTFKNILKSRISE-SRAEGAPDDALWVRTGDYGTYFKDHLYIAGRIKDLVI  496
            YW + EE+  TF+N L+SR++  S AE + D ALW+RTGD G Y    LYI GRIKDL+I
Sbjct  427  YWERPEETELTFRNKLQSRLARGSHAERSADSALWLRTGDLGVYLDGELYITGRIKDLII  486

Query  497  IDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFDPEDTSEQL  556
            +DGRNHYPQD+E TA  ++ ++R G+ AAFSVP                     +  E++
Sbjct  487  VDGRNHYPQDIEATAAAASPSVRAGFVAAFSVPG--------------------EGREEV  526

Query  557  VIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKIGRRACRA  616
            VIV ERA G  + +  PI + IRA ++  H + VRDV LV +G IPRT+SGK+ RR+CRA
Sbjct  527  VIVAERAPGAGRAEAAPIQEAIRAEVSRKHAIPVRDVKLVRSGVIPRTTSGKLARRSCRA  586

Query  617  AYLDGSL  623
            +YLDG+L
Sbjct  587  SYLDGTL  593


>gi|169631529|ref|YP_001705178.1| putative fatty-acid--CoA ligase [Mycobacterium abscessus ATCC 
19977]
 gi|169243496|emb|CAM64524.1| Probable acyl-CoA synthetase FadD [Mycobacterium abscessus]
Length=611

 Score =  579 bits (1493),  Expect = 5e-163, Method: Compositional matrix adjust.
 Identities = 322/618 (53%), Positives = 415/618 (68%), Gaps = 13/618 (2%)

Query  7    SGMAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSD  66
            SG+         G I  P    +  ++E       D  AYR++DFS++ +G   D+ W  
Sbjct  6    SGLRLEEYLDETGAISLPDGYTVNHYLECAVDGPHDTFAYRYVDFSSDPNGEPVDLNWPQ  65

Query  67   FSARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGR  126
              AR RAV ARLQQVTQPGDRVAIL PQ+LDY++ FF A+ +G IAVPLF P  PGH  R
Sbjct  66   LRARTRAVAARLQQVTQPGDRVAILAPQSLDYVVGFFAAIEAGNIAVPLFAPELPGHTER  125

Query  127  LHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEE  186
            L AVL D  P+ +LT   +AE V  FIR      RPRV+AVD+VP  V AT+ +   + +
Sbjct  126  LDAVLSDAQPTVVLTNQAAAESVNSFIRRLPRDRRPRVLAVDSVPDSVGATYVRVTPDTD  185

Query  187  TVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVL  246
             +AYLQYTSGSTR P+GV+ITH  + TNV+Q++ ++      RG SWLP +HDMGL+ +L
Sbjct  186  DIAYLQYTSGSTRAPAGVEITHRAVMTNVLQMIISVGLDVDVRGASWLPLYHDMGLL-ML  244

Query  247  LASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDE  306
            +  + G   T M+P +FVRRPGRWIRELA      G TF AAPNFAFE AA RG+P++ E
Sbjct  245  MFPLCGGRMTLMSPLSFVRRPGRWIRELAAA-SHAGRTFGAAPNFAFELAAERGLPKEGE  303

Query  307  PPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDE  366
              LDLSNV G++NGSEPVS AS+RKF  AF PYGL   A+KPSYG+AEATLFVS+   D 
Sbjct  304  -SLDLSNVAGLINGSEPVSIASIRKFNAAFGPYGLPDNAIKPSYGMAEATLFVSSIAPDA  362

Query  367  VPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGE  426
             P+VI+VDR++L       V A   NA+ QVS G+V  S+WAVIV+ +  +ELPDGQIGE
Sbjct  363  EPSVIYVDREQLGAGYATRVDAAHENAMPQVSCGQVARSQWAVIVNPNAETELPDGQIGE  422

Query  427  IWLHGNNLGTGYWGKEEESAQTFKNILKSRISE-SRAEGAPDDALWVRTGDYGTYFKDHL  485
            IWLHGNN+G GYWG+ +E+   F+N L++R+ E S A G    A+W RTGD G Y    L
Sbjct  423  IWLHGNNVGRGYWGRSQETEVCFRNKLQARLDEGSHAAGTEPGAIWFRTGDLGVYIDGEL  482

Query  486  YIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGL  545
            YI GR+KDLVI+DGRNHYP D+E T ++++  +R G+ AAFSVPA++LP  V  D+  G+
Sbjct  483  YITGRVKDLVIVDGRNHYPHDIEATVEDASPVVRRGFVAAFSVPADELPAGV--DAGDGV  540

Query  546  KFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTS  605
                    E+L+IV ERAAG  + +  PI++ +RAA++  H + V D+ LV AG IPRT+
Sbjct  541  -------GERLIIVAERAAGAGRAEPGPIIEVLRAAVSRRHALPVADIRLVQAGAIPRTT  593

Query  606  SGKIGRRACRAAYLDGSL  623
            SGKI RRACR  YLD  L
Sbjct  594  SGKIARRACRQQYLDNRL  611


>gi|118467833|ref|YP_889152.1| fatty-acid--CoA ligase [Mycobacterium smegmatis str. MC2 155]
 gi|118169120|gb|ABK70016.1| non-ribosomal peptide synthetase [Mycobacterium smegmatis str. 
MC2 155]
Length=617

 Score =  574 bits (1479),  Expect = 2e-161, Method: Compositional matrix adjust.
 Identities = 309/605 (52%), Positives = 409/605 (68%), Gaps = 24/605 (3%)

Query  18   NGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSARNRAVGAR  77
            +G I  P    L   +++   + GD+ +YRF+D+S + DG A ++ W+   A+  AVGAR
Sbjct  23   DGTIVVPDGVTLTSFLDRNRAIYGDRPSYRFIDYSHDPDGQAVELSWNALWAQVCAVGAR  82

Query  78   LQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHAVLDDCAPS  137
            LQQVT+P DRVAIL PQ +DY+ +FF A+++G +AVPLF P+  GH  RL AVL D  P+
Sbjct  83   LQQVTRPRDRVAILTPQGVDYVAAFFAAIHAGNVAVPLFAPSLAGHTERLAAVLADARPT  142

Query  138  TILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETVAYLQYTSGS  197
             +LTTT ++E VRKF+R   A ERPR+IAVDAVPT +A  +  PE + + VAYLQYTSGS
Sbjct  143  VVLTTTAASESVRKFLRTLPAAERPRMIAVDAVPTTLADMFTAPEVDTDDVAYLQYTSGS  202

Query  198  TRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGHSFTF  257
            TR P+GV+ITH N+ TNV+Q++ A + + G R VSWLP +HDMGLI ++  ++ G+  T 
Sbjct  203  TRTPAGVEITHRNVCTNVLQMILAGDLEMGIRSVSWLPLYHDMGLIMIMFPALCGNHITL  262

Query  258  MTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPLDLSNVKGI  317
            M P AFVRRP RWI++L  +    G T +AAPNFA+E AA RG+P   +  LDLSNV  +
Sbjct  263  MDPMAFVRRPYRWIKQLGIE-AAYGRTLAAAPNFAYELAAERGLPPSGD-ALDLSNVVTL  320

Query  318  LNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTVIHVDRDE  377
            LNGSEPV+ A++ KF  AFAPYGL  TAVKPSYG+AEATL V++       +VIH DR+E
Sbjct  321  LNGSEPVTMAAVEKFTTAFAPYGLPATAVKPSYGMAEATLSVASIAPSAAASVIHFDREE  380

Query  378  LNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLHGNNLGTG  437
            L+  R V VA     AV  VS G+   ++WAVI DAD  +E PDG +GEIWLHGNN+G G
Sbjct  381  LSAGRAVAVAHGTDRAVPHVSCGQPIPNQWAVIADAD-GNEAPDGAVGEIWLHGNNIGQG  439

Query  438  YWGKEEESAQTFKNILKSRI-SESRAEGAPDDALWVRTGDYGTYFKDHLYIAGRIKDLVI  496
            Y+G+ +E+ + F N L++R+ + S A+GAPD+  W+ TGD G Y    LY+ GRIKDL++
Sbjct  440  YFGRADETERVFGNKLQTRLDAGSHADGAPDNGAWLATGDLGVYVDGELYLTGRIKDLIV  499

Query  497  IDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFDPEDTSEQL  556
            IDGRNHYP D+E T   S+ A+R GY AAFS+P  +                     E+L
Sbjct  500  IDGRNHYPTDIETTVSLSSPAVRSGYVAAFSIPGER--------------------GEEL  539

Query  557  VIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKIGRRACRA  616
             IV ERAAG  + +  PIVD +RAA++  H V V DV +V+AG IPRT+SGK+ R ACRA
Sbjct  540  AIVAERAAGAGRAEPGPIVDAVRAAVSRQHQVRVADVRMVAAGVIPRTTSGKLARSACRA  599

Query  617  AYLDG  621
             YL G
Sbjct  600  EYLAG  604


>gi|40786988|gb|AAR89980.1| FadD32 [Rhodococcus rhodochrous]
Length=444

 Score =  571 bits (1472),  Expect = 1e-160, Method: Compositional matrix adjust.
 Identities = 278/436 (64%), Positives = 340/436 (78%), Gaps = 3/436 (0%)

Query  192  QYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVL  251
            QYTSGSTR+P+GV+ITH ++ TNV+Q+ +++E  E  RGV+WLP FHDMGL+TV+L +V 
Sbjct  1    QYTSGSTRVPAGVEITHRSVLTNVIQMADSIELNESSRGVTWLPLFHDMGLLTVILPAVG  60

Query  252  GHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPLDL  311
            G   T M+P AFV RPGRWIRELA    +  GTF+AAPNFAFEHAA R VP+  E  LDL
Sbjct  61   GKYITIMSPRAFVARPGRWIRELA-AVSDGAGTFAAAPNFAFEHAAARAVPKPGEE-LDL  118

Query  312  SNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTVI  371
            SNV G++NGSEPV+ ASMRKF EAF PYGL +TA+KPSYG+AEATLFVS+T   +   VI
Sbjct  119  SNVIGLINGSEPVTTASMRKFNEAFGPYGLPRTAIKPSYGMAEATLFVSSTRHSDEAKVI  178

Query  372  HVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLHG  431
            +VDR  LN  R V V  DA NA+ QVS G V  S+WA IVDA+T +E+PDGQ+GEIWLHG
Sbjct  179  YVDRTALNAGRVVRVEPDAENAIPQVSCGYVARSQWAAIVDAETGTEMPDGQVGEIWLHG  238

Query  432  NNLGTGYWGKEEESAQTFKNILKSRISE-SRAEGAPDDALWVRTGDYGTYFKDHLYIAGR  490
             N+G GYWG++EE+ +TF N +  R++E S AEG PDD+ W+RTGDYG Y    LYI GR
Sbjct  239  ENMGIGYWGRKEETDKTFHNRITKRLAEGSHAEGTPDDSKWLRTGDYGVYIDGELYITGR  298

Query  491  IKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFDPE  550
            +KDLVI+DGRNHYPQDLE +AQE+  ALR G+ AAF+VPANQLP+ VFD+  +GL+FD +
Sbjct  299  VKDLVIVDGRNHYPQDLEFSAQEANSALRPGFVAAFAVPANQLPREVFDNDASGLQFDAD  358

Query  551  DTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKIG  610
            D+SEQLVIV ERA G  K D QPI D +RAAI+  HGVT RDVLLV AG+IPRTSSGKI 
Sbjct  359  DSSEQLVIVAERAPGAGKADPQPIADAVRAAISSRHGVTARDVLLVPAGSIPRTSSGKIA  418

Query  611  RRACRAAYLDGSLRSG  626
            RRAC+ AY++G+LR G
Sbjct  419  RRACKTAYVEGTLRGG  434



Lambda     K      H
   0.318    0.135    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1471207339360


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40