BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3811 Length=539 Score E Sequences producing significant alignments: (Bits) Value gi|308376244|ref|ZP_07438122.2| hypothetical protein TMHG_02881 ... 1092 0.0 gi|308369242|ref|ZP_07417039.2| hypothetical protein TMBG_02351 ... 1092 0.0 gi|167969923|ref|ZP_02552200.1| hypothetical protein MtubH3_1859... 1091 0.0 gi|31794985|ref|NP_857478.1| hypothetical protein Mb3841 [Mycoba... 1089 0.0 gi|323717477|gb|EGB26680.1| hypothetical protein TMMG_00304 [Myc... 1088 0.0 gi|298527286|ref|ZP_07014695.1| conserved hypothetical protein [... 1088 0.0 gi|289441248|ref|ZP_06430992.1| conserved hypothetical protein [... 1087 0.0 gi|15843433|ref|NP_338470.1| hypothetical protein MT3918 [Mycoba... 1086 0.0 gi|340628780|ref|YP_004747232.1| hypothetical protein MCAN_38301... 1069 0.0 gi|289572063|ref|ZP_06452290.1| conserved hypothetical protein [... 982 0.0 gi|240172616|ref|ZP_04751275.1| hypothetical protein MkanA1_2510... 906 0.0 gi|183985343|ref|YP_001853634.1| hypothetical protein MMAR_5375 ... 889 0.0 gi|118620011|ref|YP_908343.1| hypothetical protein MUL_4995 [Myc... 873 0.0 gi|296166944|ref|ZP_06849360.1| Csp protein [Mycobacterium paras... 855 0.0 gi|254821687|ref|ZP_05226688.1| N-acetylmuramoyl-L-alanine amida... 849 0.0 gi|342860070|ref|ZP_08716722.1| N-acetylmuramoyl-L-alanine amida... 843 0.0 gi|254773265|ref|ZP_05214781.1| N-acetylmuramoyl-L-alanine amida... 841 0.0 gi|118465940|ref|YP_879500.1| N-acetylmuramoyl-L-alanine amidase... 839 0.0 gi|41406307|ref|NP_959143.1| Csp [Mycobacterium avium subsp. par... 830 0.0 gi|336461897|gb|EGO40752.1| uncharacterized protein potentially ... 828 0.0 gi|118473230|ref|YP_890619.1| N-acetylmuramoyl-L-alanine amidase... 620 2e-175 gi|120406594|ref|YP_956423.1| LGFP repeat-containing protein [My... 613 3e-173 gi|108801985|ref|YP_642182.1| LGFP [Mycobacterium sp. MCS] >gi|1... 608 1e-171 gi|289755944|ref|ZP_06515322.1| predicted protein [Mycobacterium... 603 2e-170 gi|315446515|ref|YP_004079394.1| protein potentially involved in... 591 1e-166 gi|145221749|ref|YP_001132427.1| LGFP repeat-containing protein ... 590 1e-166 gi|333992769|ref|YP_004525383.1| hypothetical protein JDM601_412... 558 8e-157 gi|289763996|ref|ZP_06523374.1| conserved hypothetical protein [... 543 2e-152 gi|169627273|ref|YP_001700922.1| putative N-acetymuramoyl-L-alan... 480 3e-133 gi|126437047|ref|YP_001072738.1| LGFP repeat-containing protein ... 410 3e-112 gi|54022135|ref|YP_116377.1| hypothetical protein nfa1710 [Nocar... 379 1e-102 gi|229492589|ref|ZP_04386392.1| lgfp repeat protein [Rhodococcus... 353 4e-95 gi|226363338|ref|YP_002781120.1| hypothetical protein ROP_39280 ... 345 1e-92 gi|226303693|ref|YP_002763651.1| hypothetical protein RER_02040 ... 342 1e-91 gi|111021033|ref|YP_704005.1| hypothetical protein RHA1_ro04050 ... 341 2e-91 gi|325675158|ref|ZP_08154844.1| Csp protein [Rhodococcus equi AT... 320 4e-85 gi|312137692|ref|YP_004005028.1| n-acetylmuramoyl-l-alanine amid... 318 2e-84 gi|54027686|ref|YP_121927.1| hypothetical protein pnf1380 [Nocar... 280 6e-73 gi|305680429|ref|ZP_07403237.1| N-acetylmuramoyl-L-alanine amida... 271 1e-70 gi|38234748|ref|NP_940515.1| hypothetical protein DIP2207 [Coryn... 270 3e-70 gi|225022360|ref|ZP_03711552.1| hypothetical protein CORMATOL_02... 270 6e-70 gi|333917776|ref|YP_004491357.1| Csp protein [Amycolicicoccus su... 260 4e-67 gi|227489135|ref|ZP_03919451.1| N-acetylmuramoyl-L-alanine amida... 252 1e-64 gi|227540698|ref|ZP_03970747.1| N-acetylmuramoyl-L-alanine amida... 252 1e-64 gi|340539677|gb|ADL11416.2| Peptidoglycan recognition protein [C... 249 1e-63 gi|300859392|ref|YP_003784375.1| hypothetical protein cpfrc_0197... 249 1e-63 gi|308277327|gb|ADO27226.1| Putative peptidoglycan recognition p... 248 2e-63 gi|340539388|gb|ADL21828.2| Peptidoglycan recognition protein [C... 248 2e-63 gi|262200228|ref|YP_003271436.1| N-acetylmuramoyl-L-alanine amid... 246 5e-63 gi|319950521|ref|ZP_08024432.1| hypothetical protein ES5_13103 [... 245 1e-62 >gi|308376244|ref|ZP_07438122.2| hypothetical protein TMHG_02881 [Mycobacterium tuberculosis SUMu008] gi|308351725|gb|EFP40576.1| hypothetical protein TMHG_02881 [Mycobacterium tuberculosis SUMu008] Length=543 Score = 1092 bits (2823), Expect = 0.0, Method: Compositional matrix adjust. Identities = 539/539 (100%), Positives = 539/539 (100%), Gaps = 0/539 (0%) Query 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG Sbjct 5 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 64 Query 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT Sbjct 65 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 124 Query 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG Sbjct 125 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 184 Query 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES Sbjct 185 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 244 Query 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 300 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA Sbjct 245 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 304 Query 301 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 360 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI Sbjct 305 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 364 Query 361 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 420 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL Sbjct 365 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 424 Query 421 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 480 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE Sbjct 425 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 484 Query 481 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT 539 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT Sbjct 485 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT 543 >gi|308369242|ref|ZP_07417039.2| hypothetical protein TMBG_02351 [Mycobacterium tuberculosis SUMu002] gi|308372750|ref|ZP_07429715.2| hypothetical protein TMEG_00309 [Mycobacterium tuberculosis SUMu005] gi|308380823|ref|ZP_07491167.2| hypothetical protein TMKG_01058 [Mycobacterium tuberculosis SUMu011] gi|308328264|gb|EFP17115.1| hypothetical protein TMBG_02351 [Mycobacterium tuberculosis SUMu002] gi|308340005|gb|EFP28856.1| hypothetical protein TMEG_00309 [Mycobacterium tuberculosis SUMu005] gi|308360320|gb|EFP49171.1| hypothetical protein TMKG_01058 [Mycobacterium tuberculosis SUMu011] Length=554 Score = 1092 bits (2823), Expect = 0.0, Method: Compositional matrix adjust. Identities = 539/539 (100%), Positives = 539/539 (100%), Gaps = 0/539 (0%) Query 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG Sbjct 16 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 75 Query 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT Sbjct 76 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 135 Query 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG Sbjct 136 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 195 Query 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES Sbjct 196 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 255 Query 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 300 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA Sbjct 256 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 315 Query 301 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 360 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI Sbjct 316 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 375 Query 361 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 420 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL Sbjct 376 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 435 Query 421 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 480 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE Sbjct 436 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 495 Query 481 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT 539 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT Sbjct 496 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT 554 >gi|167969923|ref|ZP_02552200.1| hypothetical protein MtubH3_18598 [Mycobacterium tuberculosis H37Ra] gi|254552925|ref|ZP_05143372.1| hypothetical protein Mtube_21194 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|297636493|ref|ZP_06954273.1| hypothetical protein MtubK4_20310 [Mycobacterium tuberculosis KZN 4207] 17 more sequence titles Length=553 Score = 1091 bits (2822), Expect = 0.0, Method: Compositional matrix adjust. Identities = 539/539 (100%), Positives = 539/539 (100%), Gaps = 0/539 (0%) Query 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG Sbjct 15 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 74 Query 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT Sbjct 75 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 134 Query 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG Sbjct 135 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 194 Query 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES Sbjct 195 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 254 Query 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 300 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA Sbjct 255 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 314 Query 301 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 360 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI Sbjct 315 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 374 Query 361 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 420 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL Sbjct 375 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 434 Query 421 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 480 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE Sbjct 435 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 494 Query 481 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT 539 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT Sbjct 495 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT 553 >gi|31794985|ref|NP_857478.1| hypothetical protein Mb3841 [Mycobacterium bovis AF2122/97] gi|57117160|ref|YP_178018.1| hypothetical protein Rv3811 [Mycobacterium tuberculosis H37Rv] gi|121639728|ref|YP_979952.1| hypothetical protein BCG_3873 [Mycobacterium bovis BCG str. Pasteur 1173P2] 33 more sequence titles Length=539 Score = 1089 bits (2817), Expect = 0.0, Method: Compositional matrix adjust. Identities = 539/539 (100%), Positives = 539/539 (100%), Gaps = 0/539 (0%) Query 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG Sbjct 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 Query 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT Sbjct 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 Query 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG Sbjct 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 Query 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES Sbjct 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 Query 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 300 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA Sbjct 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 300 Query 301 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 360 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI Sbjct 301 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 360 Query 361 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 420 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL Sbjct 361 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 420 Query 421 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 480 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE Sbjct 421 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 480 Query 481 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT 539 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT Sbjct 481 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT 539 >gi|323717477|gb|EGB26680.1| hypothetical protein TMMG_00304 [Mycobacterium tuberculosis CDC1551A] Length=553 Score = 1088 bits (2814), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/539 (99%), Positives = 538/539 (99%), Gaps = 0/539 (0%) Query 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG Sbjct 15 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 74 Query 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT Sbjct 75 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 134 Query 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG Sbjct 135 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 194 Query 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 TQWTPPTAVTMAGQPP IISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES Sbjct 195 TQWTPPTAVTMAGQPPPIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 254 Query 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 300 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA Sbjct 255 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 314 Query 301 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 360 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI Sbjct 315 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 374 Query 361 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 420 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL Sbjct 375 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 434 Query 421 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 480 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE Sbjct 435 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 494 Query 481 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT 539 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT Sbjct 495 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT 553 >gi|298527286|ref|ZP_07014695.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298497080|gb|EFI32374.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=539 Score = 1088 bits (2814), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/539 (99%), Positives = 539/539 (100%), Gaps = 0/539 (0%) Query 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG Sbjct 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 Query 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT Sbjct 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 Query 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG Sbjct 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 Query 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES Sbjct 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 Query 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 300 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA Sbjct 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 300 Query 301 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 360 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI Sbjct 301 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 360 Query 361 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 420 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPE+LIKALEGGAIYQRWQALGGMNSAL Sbjct 361 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEDLIKALEGGAIYQRWQALGGMNSAL 420 Query 421 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 480 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE Sbjct 421 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 480 Query 481 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT 539 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT Sbjct 481 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT 539 >gi|289441248|ref|ZP_06430992.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289748340|ref|ZP_06507718.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289414167|gb|EFD11407.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289688927|gb|EFD56356.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] Length=539 Score = 1087 bits (2812), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/539 (99%), Positives = 539/539 (100%), Gaps = 0/539 (0%) Query 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG Sbjct 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 Query 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT Sbjct 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 Query 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG Sbjct 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 Query 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES Sbjct 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 Query 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 300 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA Sbjct 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 300 Query 301 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 360 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI Sbjct 301 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 360 Query 361 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 420 FTHRDVGNTDCPGNAAYAV+DEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL Sbjct 361 FTHRDVGNTDCPGNAAYAVVDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 420 Query 421 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 480 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE Sbjct 421 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 480 Query 481 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT 539 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT Sbjct 481 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT 539 >gi|15843433|ref|NP_338470.1| hypothetical protein MT3918 [Mycobacterium tuberculosis CDC1551] gi|13883802|gb|AAK48284.1| hypothetical protein MT3918 [Mycobacterium tuberculosis CDC1551] Length=539 Score = 1086 bits (2809), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/539 (99%), Positives = 538/539 (99%), Gaps = 0/539 (0%) Query 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG Sbjct 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 Query 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT Sbjct 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 Query 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG Sbjct 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 Query 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 TQWTPPTAVTMAGQPP IISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES Sbjct 181 TQWTPPTAVTMAGQPPPIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 Query 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 300 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA Sbjct 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 300 Query 301 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 360 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI Sbjct 301 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 360 Query 361 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 420 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL Sbjct 361 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 420 Query 421 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 480 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE Sbjct 421 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 480 Query 481 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT 539 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT Sbjct 481 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT 539 >gi|340628780|ref|YP_004747232.1| hypothetical protein MCAN_38301 [Mycobacterium canettii CIPT 140010059] gi|340006970|emb|CCC46161.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=539 Score = 1069 bits (2764), Expect = 0.0, Method: Compositional matrix adjust. Identities = 529/539 (99%), Positives = 533/539 (99%), Gaps = 0/539 (0%) Query 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 MAATVVIVAW+ NRPPASSHEPSPTP+TQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG Sbjct 1 MAATVVIVAWVVNRPPASSHEPSPTPDTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 Query 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVE GGLNPGPRSTDPVFVGTT Sbjct 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVEPGGLNPGPRSTDPVFVGTT 120 Query 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 TTVQVAVTRPIDAPITQPPAGRP N L D+GLGYRPATKEQPFGQNISAILISPPQAPPG Sbjct 121 TTVQVAVTRPIDAPITQPPAGRPTNALPDNGLGYRPATKEQPFGQNISAILISPPQAPPG 180 Query 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES Sbjct 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 Query 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 300 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA Sbjct 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 300 Query 301 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 360 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI Sbjct 301 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 360 Query 361 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 420 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL Sbjct 361 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 420 Query 421 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 480 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQP+TGAIYEAWAS SYERGPLGLPTSAE Sbjct 421 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPVTGAIYEAWASLSYERGPLGLPTSAE 480 Query 481 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT 539 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT Sbjct 481 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPIT 539 >gi|289572063|ref|ZP_06452290.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289545817|gb|EFD49465.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] Length=485 Score = 982 bits (2538), Expect = 0.0, Method: Compositional matrix adjust. Identities = 483/485 (99%), Positives = 485/485 (100%), Gaps = 0/485 (0%) Query 55 LVALTGDLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDP 114 +VALTGDLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDP Sbjct 1 MVALTGDLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDP 60 Query 115 VFVGTTTTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISP 174 VFVGTTTTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISP Sbjct 61 VFVGTTTTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISP 120 Query 175 PQAPPGTQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSND 234 PQAPPGTQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSND Sbjct 121 PQAPPGTQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSND 180 Query 235 YSPLESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNR 294 YSPLESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNR Sbjct 181 YSPLESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNR 240 Query 295 NTWGVAMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAI 354 NTWGVAMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAI Sbjct 241 NTWGVAMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAI 300 Query 355 ARLPAIFTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALG 414 ARLPAIFTHRDVGNTDCPGNAAYAV+DEIRDIAAHFNDPPEELIKALEGGAIYQRWQALG Sbjct 301 ARLPAIFTHRDVGNTDCPGNAAYAVVDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALG 360 Query 415 GMNSALGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLG 474 GMNSALGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLG Sbjct 361 GMNSALGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLG 420 Query 475 LPTSAEIQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLP 534 LPTSAEIQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLP Sbjct 421 LPTSAEIQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLP 480 Query 535 THPIT 539 THPIT Sbjct 481 THPIT 485 >gi|240172616|ref|ZP_04751275.1| hypothetical protein MkanA1_25100 [Mycobacterium kansasii ATCC 12478] Length=537 Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust. Identities = 447/538 (84%), Positives = 479/538 (90%), Gaps = 7/538 (1%) Query 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 +AATVVIV+W+ NRPP S+HE P +TQL E+PLIGLGGGVTVRELTQDTPFSLVALTG Sbjct 6 VAATVVIVSWVLNRPPHSTHERPPAQDTQLVEKPLIGLGGGVTVRELTQDTPFSLVALTG 65 Query 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 DLAGTS RVRAKRPDG WGPWYQ EYET D G D + GPRSTDPVFVG+T Sbjct 66 DLAGTSTRVRAKRPDGSWGPWYQAEYETAAPDAPGPDPA----DAGAGPRSTDPVFVGST 121 Query 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 TTVQ+AVTRP+DAP+TQ P N + LGYRPATKEQPFGQNISAILISPPQAP Sbjct 122 TTVQIAVTRPVDAPVTQAPVTAEANP---AELGYRPATKEQPFGQNISAILISPPQAPAR 178 Query 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 TQWTPPT VTM GQ P IISRAEWGADESLRC +P+YDR VRAAVVHHTAGSNDYSPLES Sbjct 179 TQWTPPTGVTMPGQAPPIISRAEWGADESLRCGSPQYDRAVRAAVVHHTAGSNDYSPLES 238 Query 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 300 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVE FHTGGFNR+TWGVA Sbjct 239 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEAFHTGGFNRDTWGVA 298 Query 301 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 360 MIGNFDDVAPTP+Q+R VGRLLGWRLGMDDVDP+ V+L+SAGSSYTTFP GAIARLPAI Sbjct 299 MIGNFDDVAPTPLQLRAVGRLLGWRLGMDDVDPKGTVELESAGSSYTTFPAGAIARLPAI 358 Query 361 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 420 FTHRDVGNTDCPGNA YA+MDEIRDIAAHFNDPPEEL+KALEGG IY+RWQALGGMNS L Sbjct 359 FTHRDVGNTDCPGNAGYALMDEIRDIAAHFNDPPEELLKALEGGVIYERWQALGGMNSVL 418 Query 421 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 480 GAPTSPEA+AA ARY TFAKGAMYWSP T AQP+TGAIY+AWAS SYERGPLGLPTSAE Sbjct 419 GAPTSPEAEAAGAARYVTFAKGAMYWSPETGAQPVTGAIYDAWASLSYERGPLGLPTSAE 478 Query 481 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPI 538 IQEPL+ITQNFQHG LNFERLTGN+TEVVDGITTPL+T+PPSGPTVPPEHF+LPTHP+ Sbjct 479 IQEPLRITQNFQHGVLNFERLTGNITEVVDGITTPLSTQPPSGPTVPPEHFSLPTHPV 536 >gi|183985343|ref|YP_001853634.1| hypothetical protein MMAR_5375 [Mycobacterium marinum M] gi|183178669|gb|ACC43779.1| conserved hypothetical secreted protein [Mycobacterium marinum M] Length=550 Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/538 (81%), Positives = 477/538 (89%), Gaps = 4/538 (0%) Query 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 +AATVVIV+W+ RPP S+HE +T+L EQPL+GLGGGVTVR+LTQD PFSLVALTG Sbjct 15 IAATVVIVSWVLTRPPPSTHEQPSAQDTRLVEQPLVGLGGGVTVRQLTQDEPFSLVALTG 74 Query 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 DL GTSAR+RA++ DG WGPWYQ EYET D G G+ G + PRST+PVFVGTT Sbjct 75 DLVGTSARMRARQSDGSWGPWYQAEYETAAPDEQGA-GAPATAGTSERPRSTEPVFVGTT 133 Query 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 TV++AVTRPIDAP+TQPP P + LGYRPATKE PFGQNISA+LISPPQAP G Sbjct 134 NTVEIAVTRPIDAPVTQPPPTGEPEPV---DLGYRPATKELPFGQNISAVLISPPQAPAG 190 Query 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 T WTPPT VTM GQ P IISRA+WGADE+LRCE+PEYDR VRAAVVHHTAGSNDYSPLES Sbjct 191 THWTPPTGVTMPGQAPPIISRADWGADEALRCESPEYDRAVRAAVVHHTAGSNDYSPLES 250 Query 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 300 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQ+FEGSAGGLTKPVEGFHTGGFNR+TWGVA Sbjct 251 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQIFEGSAGGLTKPVEGFHTGGFNRDTWGVA 310 Query 301 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 360 MIGNFDDVAPTP+QIR VGRLLGWRLG+ +VDP+SMV+L+S GSSYTT PGGAIA+LPAI Sbjct 311 MIGNFDDVAPTPLQIRAVGRLLGWRLGIAEVDPKSMVELESTGSSYTTVPGGAIAKLPAI 370 Query 361 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 420 FTHRDVGNTDCPGNAAYA+MDEIR+IA+HFNDPPEEL+K+LEGGAIYQRWQ LG MNS L Sbjct 371 FTHRDVGNTDCPGNAAYALMDEIREIASHFNDPPEELLKSLEGGAIYQRWQELGAMNSVL 430 Query 421 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 480 GAPTSPEAD ADGARYATFAKGAMYWSP T AQP+TGAIY+AWAS SYERGPLGLPTSAE Sbjct 431 GAPTSPEADGADGARYATFAKGAMYWSPTTGAQPVTGAIYDAWASLSYERGPLGLPTSAE 490 Query 481 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPI 538 IQEPL+ITQNFQHG LNF+RLTGNV+EVV+GITTPLAT+PPSGP VPPEHF+LP HPI Sbjct 491 IQEPLRITQNFQHGVLNFQRLTGNVSEVVNGITTPLATKPPSGPMVPPEHFSLPIHPI 548 >gi|118620011|ref|YP_908343.1| hypothetical protein MUL_4995 [Mycobacterium ulcerans Agy99] gi|118572121|gb|ABL06872.1| conserved hypothetical secreted protein [Mycobacterium ulcerans Agy99] Length=541 Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/538 (80%), Positives = 470/538 (88%), Gaps = 4/538 (0%) Query 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 +AATVVIV+W+ RPP S+HE +T+L EQPL+GLGGGVTVR+LTQD PFSLVALTG Sbjct 6 IAATVVIVSWVLTRPPPSTHEQPSAQDTRLVEQPLVGLGGGVTVRQLTQDEPFSLVALTG 65 Query 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 DL GTSAR+RA++ DG WGPWYQ EYET D G G+ G + PRST+PVFVGTT Sbjct 66 DLVGTSARMRARQSDGSWGPWYQAEYETAAPDEQGA-GAPATAGTSERPRSTEPVFVGTT 124 Query 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 TV++AVTR IDAP+TQPP P L LGYRPATKE PFGQNISA+LISPPQAP G Sbjct 125 NTVEIAVTRSIDAPVTQPPPTGEPEPL---DLGYRPATKELPFGQNISAVLISPPQAPAG 181 Query 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 T WTPPT VTM GQ P IISRA+WGADE+LRCE+PEYDR VRAAVVH TAGSNDYSPLES Sbjct 182 THWTPPTGVTMPGQAPPIISRADWGADEALRCESPEYDRTVRAAVVHQTAGSNDYSPLES 241 Query 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVA 300 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQ+FEGSAGGLTKPVEGFHTGGFNR+ WGVA Sbjct 242 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQIFEGSAGGLTKPVEGFHTGGFNRDAWGVA 301 Query 301 MIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAI 360 MIGNFDDVAPTP+QIR VGRLLGWRLG+ +VDP+SMV+L+S GSSYTT PGGAIA+LPAI Sbjct 302 MIGNFDDVAPTPLQIRAVGRLLGWRLGIAEVDPKSMVELESTGSSYTTVPGGAIAKLPAI 361 Query 361 FTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSAL 420 FTHRDVGNTDCPGNAAYA+MDEIR+IA+HFNDPPEEL+K+LEGGA YQRWQ LG MNS L Sbjct 362 FTHRDVGNTDCPGNAAYALMDEIREIASHFNDPPEELLKSLEGGATYQRWQELGAMNSVL 421 Query 421 GAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAE 480 GAPTSPEAD A GARYATFAKG MYWS T AQP+TGAIY+AWAS SYERGPLGLPTSAE Sbjct 422 GAPTSPEADGAGGARYATFAKGVMYWSSTTGAQPVTGAIYDAWASLSYERGPLGLPTSAE 481 Query 481 IQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHPI 538 IQEPL+ITQNFQHG LNF+RLTGNV+EVV+GITTPLAT+PPSGP VPPEHF+LP HPI Sbjct 482 IQEPLRITQNFQHGVLNFQRLTGNVSEVVNGITTPLATKPPSGPMVPPEHFSLPIHPI 539 >gi|296166944|ref|ZP_06849360.1| Csp protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897683|gb|EFG77273.1| Csp protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=535 Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/542 (79%), Positives = 463/542 (86%), Gaps = 19/542 (3%) Query 1 MAATVVIVAWIANRPPASSHE-----PSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSL 55 +AATVVIV+W+ + ++H+ P TQLAEQPLIGLGGGVTVREL+Q TPFSL Sbjct 5 IAATVVIVSWVGD----TTHDRDAAGPPAAHGTQLAEQPLIGLGGGVTVRELSQATPFSL 60 Query 56 VALTGDLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPV 115 VALTGDLAGTS RVRA+ DG WGPWYQTEYET D A T G +E GPR TDPV Sbjct 61 VALTGDLAGTSTRVRARHADGSWGPWYQTEYETAAPDGASTSGPLE------GPRGTDPV 114 Query 116 FVGTTTTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPP 175 FVGTTTTVQ+AVTRPIDAP+TQPP P D+GLGY+PA++EQPFGQNISAILISPP Sbjct 115 FVGTTTTVQIAVTRPIDAPLTQPP----PAPANDTGLGYKPASREQPFGQNISAILISPP 170 Query 176 QAPPGTQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDY 235 QAP QWTPP+ V M GQ PAIISRAEWGADESLRC +P+YD GVRAAVVHHTAGSNDY Sbjct 171 QAPAKAQWTPPSGVLMPGQAPAIISRAEWGADESLRCGSPQYDNGVRAAVVHHTAGSNDY 230 Query 236 SPLESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRN 295 SPLESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTK VE FHTGGFNRN Sbjct 231 SPLESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKAVEAFHTGGFNRN 290 Query 296 TWGVAMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIA 355 TWGVAMIGNFDDV PTP Q+RT+GRLLGWRLG+D VDP+ V L+SAGS YT FP GA+A Sbjct 291 TWGVAMIGNFDDVPPTPTQLRTMGRLLGWRLGLDGVDPKGTVQLESAGSHYTNFPAGAVA 350 Query 356 RLPAIFTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGG 415 LP IFTHRDVGNTDCPGNAAYA+MDEIRD+A+HFNDPPEEL++AL GGAIY W A+GG Sbjct 351 TLPTIFTHRDVGNTDCPGNAAYALMDEIRDVASHFNDPPEELLQALRGGAIYDHWLAIGG 410 Query 416 MNSALGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGL 475 + S LGAPTSPE DA GARY TFAKGAMYWSP T AQP+TGAIY+AWAS SYERGPLGL Sbjct 411 VKSVLGAPTSPEGDAEGGARYVTFAKGAMYWSPETGAQPVTGAIYDAWASLSYERGPLGL 470 Query 476 PTSAEIQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPT 535 PTSAEIQEPLQITQNFQHGTLN+ERLTGNVTEV +GITTPLAT+ PSGPTVPPEHF+LPT Sbjct 471 PTSAEIQEPLQITQNFQHGTLNYERLTGNVTEVAEGITTPLATQSPSGPTVPPEHFSLPT 530 Query 536 HP 537 HP Sbjct 531 HP 532 >gi|254821687|ref|ZP_05226688.1| N-acetylmuramoyl-L-alanine amidase [Mycobacterium intracellulare ATCC 13950] Length=539 Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust. Identities = 420/538 (79%), Positives = 458/538 (86%), Gaps = 7/538 (1%) Query 1 MAATVVIVAWIANRPPAS-SHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALT 59 +AATVVIV+W+ + + P+P TQL EQPLIGLG GVTVRE+ QD PFSLVALT Sbjct 5 IAATVVIVSWVGDATRGRVAAGPAPARGTQLVEQPLIGLGAGVTVREIGQDAPFSLVALT 64 Query 60 GDLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGT 119 GDLAGTS RVRA+ PDG WGPWYQTEYET DPAG + G+ GPR TDPVFVGT Sbjct 65 GDLAGTSTRVRARHPDGSWGPWYQTEYETAAPDPAG---AAHPAGVAEGPRGTDPVFVGT 121 Query 120 TTTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPP 179 TTTVQ+AVTRP+DA TQPP P LGY+PA++EQPFGQNISA+LISPPQAP Sbjct 122 TTTVQIAVTRPLDAKATQPPPASPTEA---KDLGYKPASREQPFGQNISAVLISPPQAPA 178 Query 180 GTQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLE 239 TQWTPP+ V M GQ P IISRAEWGADESLRC +P+YD G+RAAV+HHTAGSNDYSPLE Sbjct 179 QTQWTPPSGVVMPGQAPPIISRAEWGADESLRCGSPQYDNGIRAAVIHHTAGSNDYSPLE 238 Query 240 SAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGV 299 SAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTK VE FHTGGFNRNTWGV Sbjct 239 SAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKAVEAFHTGGFNRNTWGV 298 Query 300 AMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPA 359 +MIGNFDDV PTPIQ+RTVGRLLGWRLG+D VDP+ V L+SAGS YTTFP G++A LP Sbjct 299 SMIGNFDDVPPTPIQLRTVGRLLGWRLGIDGVDPKGTVQLESAGSHYTTFPAGSVATLPT 358 Query 360 IFTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSA 419 IFTHRDVGNTDCPGNAAYA+MDEIRDIAAHFNDPPEELIKAL+GGAIY WQA+GGMNS Sbjct 359 IFTHRDVGNTDCPGNAAYALMDEIRDIAAHFNDPPEELIKALQGGAIYDHWQAIGGMNSV 418 Query 420 LGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSA 479 LGAPT+PE AA AR+ TFA+GAMYWSP T QP+TGAIY+AW SQSYERGPLGLPTSA Sbjct 419 LGAPTAPEDSAAGDARFVTFARGAMYWSPETGPQPVTGAIYDAWGSQSYERGPLGLPTSA 478 Query 480 EIQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHP 537 EIQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLAT+ PSGPTVP EHF+LP HP Sbjct 479 EIQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATQLPSGPTVPAEHFSLPAHP 536 >gi|342860070|ref|ZP_08716722.1| N-acetylmuramoyl-L-alanine amidase [Mycobacterium colombiense CECT 3035] gi|342132448|gb|EGT85677.1| N-acetylmuramoyl-L-alanine amidase [Mycobacterium colombiense CECT 3035] Length=545 Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust. Identities = 417/538 (78%), Positives = 459/538 (86%), Gaps = 10/538 (1%) Query 1 MAATVVIVAWIANRP-PASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALT 59 MAATVV+V+W+A + P P+ TQL EQPL+GLG GVTVRE++Q PFSLVALT Sbjct 14 MAATVVLVSWVAGTTRDRGAAGPPPSRGTQLVEQPLVGLGAGVTVREISQTAPFSLVALT 73 Query 60 GDLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGT 119 GDLAGTS RVRAKRPDG WGPWYQTEYET D A GS+E GPR TDPVFVGT Sbjct 74 GDLAGTSTRVRAKRPDGSWGPWYQTEYETAAPDGATATGSLE------GPRGTDPVFVGT 127 Query 120 TTTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPP 179 TTTVQ+AVTRP+DA +TQPP PP++ D LGY+PA++EQPFGQNISA+LISPPQAP Sbjct 128 TTTVQIAVTRPLDAAVTQPPPA-PPSEKAD--LGYKPASREQPFGQNISAVLISPPQAPV 184 Query 180 GTQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLE 239 T WTPP V M GQ P IISRA+WGADESLRC TP+YD G+RAAVVHHTAGSNDYSPLE Sbjct 185 ETHWTPPAGVLMPGQAPPIISRAQWGADESLRCGTPQYDNGIRAAVVHHTAGSNDYSPLE 244 Query 240 SAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGV 299 SAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTK VE FHTGGFNRNTWGV Sbjct 245 SAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKAVEAFHTGGFNRNTWGV 304 Query 300 AMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPA 359 AMIGNFDDV PTPIQ+RT+GRLLGWRLG+D VDP+ V L+SAGS YTTFP G+IA LP Sbjct 305 AMIGNFDDVPPTPIQLRTMGRLLGWRLGLDGVDPKGTVQLESAGSHYTTFPAGSIATLPT 364 Query 360 IFTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSA 419 IFTHRDVGNTDCPGNAAYA+MDE+RDIA+H NDPPEELIKAL+GGAIY W A+GGMNS Sbjct 365 IFTHRDVGNTDCPGNAAYALMDEMRDIASHVNDPPEELIKALQGGAIYDHWLAIGGMNSV 424 Query 420 LGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSA 479 LG+PTSPE A AR+ TFA+GAMYWSP T AQP+TGAIY+AWAS+SYERGPLGLPTSA Sbjct 425 LGSPTSPEDSAEGDARFVTFARGAMYWSPETGAQPVTGAIYDAWASESYERGPLGLPTSA 484 Query 480 EIQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHP 537 EIQEPLQITQNFQHGTLN+ERLTGNV+EVVDGIT PL T PPSGPTVP EHF+LP+HP Sbjct 485 EIQEPLQITQNFQHGTLNYERLTGNVSEVVDGITVPLTTEPPSGPTVPAEHFSLPSHP 542 >gi|254773265|ref|ZP_05214781.1| N-acetylmuramoyl-L-alanine amidase [Mycobacterium avium subsp. avium ATCC 25291] Length=542 Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/539 (78%), Positives = 457/539 (85%), Gaps = 15/539 (2%) Query 1 MAATVVIVAWI--ANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVAL 58 +AATVV+V+W+ A R ++ P P TQL EQPLIGLG GVTVRE++Q TPFSLVAL Sbjct 14 IAATVVLVSWVGDATRDRGAAGAP-PARGTQLTEQPLIGLGAGVTVREISQQTPFSLVAL 72 Query 59 TGDLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVG 118 TGDLAGTS RVRA+R DG WGPWYQTEYET DP G+ E GPR TDPVFVG Sbjct 73 TGDLAGTSTRVRARRRDGSWGPWYQTEYETAAPDPGHAGGATE------GPRGTDPVFVG 126 Query 119 TTTTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAP 178 TTTVQ+AVTRP+DAP TQPP RP +DL GYRPA++EQPFGQNISA+LISPPQAP Sbjct 127 ITTTVQIAVTRPLDAPATQPPP-RPADDL-----GYRPASREQPFGQNISAVLISPPQAP 180 Query 179 PGTQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPL 238 T WTPP+ V M GQ P IISRAEWGADESLRC +P+YD G+RAAVVHHTAGSNDYSPL Sbjct 181 SETHWTPPSGVVMPGQAPPIISRAEWGADESLRCGSPQYDNGIRAAVVHHTAGSNDYSPL 240 Query 239 ESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWG 298 ESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTK VE FHTGGFNRNTWG Sbjct 241 ESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKAVEAFHTGGFNRNTWG 300 Query 299 VAMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLP 358 VAMIGNFDDV PTP+Q+R VGRLLGWRLGMD VDP+ V L+SAGS YTT+ G +A LP Sbjct 301 VAMIGNFDDVPPTPVQLRAVGRLLGWRLGMDGVDPKGTVQLESAGSHYTTYAAGTVATLP 360 Query 359 AIFTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNS 418 IFTHRDVGNTDCPGNAAYA+MDEIRDIAAH NDPPEELIKAL+GGAIY WQ +GGMNS Sbjct 361 TIFTHRDVGNTDCPGNAAYALMDEIRDIAAHVNDPPEELIKALQGGAIYAHWQEIGGMNS 420 Query 419 ALGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTS 478 LGAPT+PE AAD AR+ TF +GAMYWSP T AQP+TGAIY+AW SQSYERGPLGLPTS Sbjct 421 VLGAPTAPEDSAADDARFVTFVRGAMYWSPQTGAQPVTGAIYDAWGSQSYERGPLGLPTS 480 Query 479 AEIQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHP 537 AEIQEPLQITQNFQHGTLN+ERLTGNVTEV+DGITTPLAT+ PSGPTVP EHF+LPTHP Sbjct 481 AEIQEPLQITQNFQHGTLNYERLTGNVTEVLDGITTPLATQLPSGPTVPAEHFSLPTHP 539 >gi|118465940|ref|YP_879500.1| N-acetylmuramoyl-L-alanine amidase [Mycobacterium avium 104] gi|118167227|gb|ABK68124.1| N-acetylmuramoyl-L-alanine amidase [Mycobacterium avium 104] Length=542 Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust. Identities = 418/539 (78%), Positives = 457/539 (85%), Gaps = 15/539 (2%) Query 1 MAATVVIVAWI--ANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVAL 58 +AATVV+V+W+ A R ++ P P TQL EQPLIGLG GVTVRE++Q TPFSLVAL Sbjct 14 IAATVVLVSWVGDATRDRGAAGAP-PARGTQLTEQPLIGLGAGVTVREISQQTPFSLVAL 72 Query 59 TGDLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVG 118 TGDLAGTS RVRA+R DG WGPWYQTEYET DP + E GPR TDPVFVG Sbjct 73 TGDLAGTSTRVRARRRDGSWGPWYQTEYETAAPDPGHAGEATE------GPRGTDPVFVG 126 Query 119 TTTTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAP 178 TTTTVQ+AVTRP+DAP TQPP RP +DL GYRPA++EQPFGQNISA+LISPPQAP Sbjct 127 TTTTVQIAVTRPLDAPATQPPP-RPADDL-----GYRPASREQPFGQNISAVLISPPQAP 180 Query 179 PGTQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPL 238 T WTPP+ V M GQ P IISRAEWGADESLRC +P+YD G+RAAVVHHTAG+NDYSPL Sbjct 181 SETHWTPPSGVVMPGQAPPIISRAEWGADESLRCGSPQYDNGIRAAVVHHTAGNNDYSPL 240 Query 239 ESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWG 298 ESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTK VE FHTGGFNRNTWG Sbjct 241 ESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKAVEAFHTGGFNRNTWG 300 Query 299 VAMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLP 358 VAMIGNFDDV PTP+Q+R VGRLLGWRLGMD VDP+ V L+SAGS YTT+ G +A LP Sbjct 301 VAMIGNFDDVPPTPVQLRAVGRLLGWRLGMDGVDPKGTVQLESAGSHYTTYAAGTVATLP 360 Query 359 AIFTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNS 418 IFTHRDVGNTDCPGNAAYA+MDEIRDIAAH NDPPEELIKAL+GGAIY WQ +GGMNS Sbjct 361 TIFTHRDVGNTDCPGNAAYALMDEIRDIAAHVNDPPEELIKALQGGAIYAHWQEIGGMNS 420 Query 419 ALGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTS 478 LGAPT+PE AAD AR+ TF +GAMYWSP T AQP+TGAIY+AW SQSYERGPLGLPTS Sbjct 421 VLGAPTAPEDSAADDARFVTFVRGAMYWSPQTGAQPVTGAIYDAWGSQSYERGPLGLPTS 480 Query 479 AEIQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHP 537 AEIQEPLQITQNFQHGTLN+ERLTGNVTEV+DGITTPLAT+ PSGPTVP EHF+LPTHP Sbjct 481 AEIQEPLQITQNFQHGTLNYERLTGNVTEVLDGITTPLATQLPSGPTVPAEHFSLPTHP 539 >gi|41406307|ref|NP_959143.1| Csp [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394655|gb|AAS02526.1| Csp [Mycobacterium avium subsp. paratuberculosis K-10] Length=536 Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust. Identities = 413/538 (77%), Positives = 452/538 (85%), Gaps = 10/538 (1%) Query 1 MAATVVIVAWIANRP-PASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALT 59 +AATVV+V+W+ + + P TQL EQPLIGLG GVTVRE++Q +PFSLVALT Sbjct 5 IAATVVLVSWVGDATRDRGAAAAPPARGTQLTEQPLIGLGAGVTVREISQQSPFSLVALT 64 Query 60 GDLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGT 119 GDLAGTS RVRA+R DG WGPWYQTEYET DP G+ E GPR TDPVFVGT Sbjct 65 GDLAGTSTRVRARRRDGSWGPWYQTEYETAAPDPGHAGGATE------GPRGTDPVFVGT 118 Query 120 TTTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPP 179 TTTVQ+AVTRP+DAP+TQPP LGYRPA++EQPFGQNISA+LISPPQAP Sbjct 119 TTTVQIAVTRPLDAPVTQPPP---APPRPADDLGYRPASREQPFGQNISAVLISPPQAPS 175 Query 180 GTQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLE 239 T WTPP+ V M GQ P IISRAEWGADESLRC +P+YD G+RAAVVHHTAGSNDYSPLE Sbjct 176 ETHWTPPSGVVMPGQAPPIISRAEWGADESLRCGSPQYDNGIRAAVVHHTAGSNDYSPLE 235 Query 240 SAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGV 299 SAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTK VE FHTGGFNRNTWGV Sbjct 236 SAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKAVEAFHTGGFNRNTWGV 295 Query 300 AMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPA 359 AMIGNFDDV PTP+Q+R VGRLLGWRLGMD VDP+ V L+SAGS YTT+ G +A LP Sbjct 296 AMIGNFDDVPPTPVQLRAVGRLLGWRLGMDGVDPKGTVQLESAGSHYTTYAAGTVATLPT 355 Query 360 IFTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSA 419 IFTHRDVGNTDCPGNAAYA+MDEIRDIAAH NDPPEELIKAL+GGAIY WQ +GGMNS Sbjct 356 IFTHRDVGNTDCPGNAAYALMDEIRDIAAHVNDPPEELIKALQGGAIYAHWQEIGGMNSV 415 Query 420 LGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSA 479 LGAPT+PE AAD AR+ TF +GAMYWSP T AQP+TGAIY+AW SQSYERGPLGLPTSA Sbjct 416 LGAPTAPEDSAADDARFVTFVRGAMYWSPQTGAQPVTGAIYDAWGSQSYERGPLGLPTSA 475 Query 480 EIQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHP 537 EIQEPLQITQNFQHGTLN+ERLTGNVTEV+DGITTPLAT+ PSGPTVP EHF+LPTHP Sbjct 476 EIQEPLQITQNFQHGTLNYERLTGNVTEVLDGITTPLATQLPSGPTVPAEHFSLPTHP 533 >gi|336461897|gb|EGO40752.1| uncharacterized protein potentially involved in peptidoglycan biosynthesis [Mycobacterium avium subsp. paratuberculosis S397] Length=545 Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/538 (77%), Positives = 451/538 (84%), Gaps = 10/538 (1%) Query 1 MAATVVIVAWIANRP-PASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALT 59 +AATVV+V+W+ + + P TQL EQPLIGLG GVTVRE++Q +PFSLVALT Sbjct 14 IAATVVLVSWVGDATRDRGAAAAPPARGTQLTEQPLIGLGAGVTVREISQQSPFSLVALT 73 Query 60 GDLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGT 119 GDLAGTS RVRA+R DG WGPWYQTEYET DP G+ E GPR TDPVFVGT Sbjct 74 GDLAGTSTRVRARRRDGSWGPWYQTEYETAAPDPGHAGGATE------GPRGTDPVFVGT 127 Query 120 TTTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPP 179 TTTVQ+AVTRP+DAP+TQPP LGYRPA++EQPFGQNISA+LISPPQAP Sbjct 128 TTTVQIAVTRPLDAPVTQPPP---APPRPADDLGYRPASREQPFGQNISAVLISPPQAPS 184 Query 180 GTQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLE 239 T WTPP+ V M GQ P IISRAEWGADESLRC +P+YD G+RAAVVHHTAGSNDYSPLE Sbjct 185 ETHWTPPSGVVMPGQAPPIISRAEWGADESLRCGSPQYDNGIRAAVVHHTAGSNDYSPLE 244 Query 240 SAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGV 299 SAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTK VE FHTGGFNRNTWGV Sbjct 245 SAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKAVEAFHTGGFNRNTWGV 304 Query 300 AMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPA 359 AMIGNFDDV PTP+Q+R VGRLLGWRLGMD VDP+ V L+SAGS YTT+ G +A LP Sbjct 305 AMIGNFDDVPPTPVQLRAVGRLLGWRLGMDGVDPKGTVQLESAGSHYTTYAAGTVATLPT 364 Query 360 IFTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSA 419 IFTHRDVGNTDCPGNAAYA+MDEIRDIAAH NDPPEELIKAL+GGAIY WQ +GG NS Sbjct 365 IFTHRDVGNTDCPGNAAYALMDEIRDIAAHVNDPPEELIKALQGGAIYAHWQEIGGTNSV 424 Query 420 LGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSA 479 LGAPT+PE AAD AR+ TF +GAMYWSP T AQP+TGAIY+AW SQSYERGPLGLPTSA Sbjct 425 LGAPTAPEDSAADDARFVTFVRGAMYWSPQTGAQPVTGAIYDAWGSQSYERGPLGLPTSA 484 Query 480 EIQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHP 537 EIQEPLQITQNFQHGTLN+ERLTGNVTEV+DGITTPLAT+ PSGPTVP EHF+LPTHP Sbjct 485 EIQEPLQITQNFQHGTLNYERLTGNVTEVLDGITTPLATQLPSGPTVPAEHFSLPTHP 542 >gi|118473230|ref|YP_890619.1| N-acetylmuramoyl-L-alanine amidase [Mycobacterium smegmatis str. MC2 155] gi|118174517|gb|ABK75413.1| N-acetylmuramoyl-L-alanine amidase [Mycobacterium smegmatis str. MC2 155] Length=536 Score = 620 bits (1599), Expect = 2e-175, Method: Compositional matrix adjust. Identities = 328/535 (62%), Positives = 383/535 (72%), Gaps = 19/535 (3%) Query 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 +AAT+++V W + H P+ + L +QPL LGGG T+RE+ QD PFSLVALT Sbjct 15 IAATLIVVPWALSGTGDEHHNPAADAPS-LTQQPLDDLGGGETIREIHQDEPFSLVALTA 73 Query 61 -DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGT 119 DL GTSAR+RAK+ DG WGPWY+ E DG +G PGPR TDPVFVG Sbjct 74 HDLDGTSARIRAKKADGSWGPWYEAE---------ALDG---VGADTPGPRGTDPVFVGR 121 Query 120 TTTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPP 179 T TVQ+A+TRP +A T P A + +D LGYRPAT +QP GQN++A+LISPPQAP Sbjct 122 TNTVQIAITRPENAAPTAP-APKNKDDKNKPDLGYRPATVQQPLGQNVTAVLISPPQAPA 180 Query 180 GTQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLE 239 PTAVT G PP II RA+WGADES+RC YD G+RA +VHHTAGSNDY+P + Sbjct 181 DIG-PLPTAVTAPGVPPHIIGRAQWGADESMRCPA-VYDAGIRAGIVHHTAGSNDYAPED 238 Query 240 SAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGV 299 SAGIV++IY YH++TLGWCDIAYNALVDKYGQVFEG AGG+ +PVEG HTGGFNR+TWGV Sbjct 239 SAGIVRSIYEYHTRTLGWCDIAYNALVDKYGQVFEGRAGGMDRPVEGAHTGGFNRDTWGV 298 Query 300 AMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPA 359 AM+GNFD V PTPIQ+RT GRLLGWRLG+D +DP V L S G S+T FP GA LPA Sbjct 299 AMMGNFDAVPPTPIQLRTTGRLLGWRLGLDRIDPHGTVVLASEGGSFTHFPRGATPTLPA 358 Query 360 IFTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDP--PEELIKALEGGAIYQRWQALGGMN 417 IFTHRDVGNTDCPGNAAYA M +RDIAA FN P PEEL + + GGAI+ RW+++GG Sbjct 359 IFTHRDVGNTDCPGNAAYAEMGRLRDIAARFNQPPGPEELAEQMRGGAIFARWESVGGPA 418 Query 418 SALGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPT 477 LG PTSPEA A ARYATF +GA+YWSPVT AQP+TGAIYEAW +ERG LGLPT Sbjct 419 GPLGNPTSPEAAAEGEARYATFERGAIYWSPVTGAQPLTGAIYEAWGRLGFERGALGLPT 478 Query 478 SAEIQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFT 532 S EI EPL I QNFQHGTLNF+R V V+DG+ L P V E FT Sbjct 479 SGEIHEPLWIKQNFQHGTLNFDREKHTVVRVIDGVPQELPPAAPDDQPVQLERFT 533 >gi|120406594|ref|YP_956423.1| LGFP repeat-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119959412|gb|ABM16417.1| LGFP repeat protein [Mycobacterium vanbaalenii PYR-1] Length=539 Score = 613 bits (1580), Expect = 3e-173, Method: Compositional matrix adjust. Identities = 333/543 (62%), Positives = 386/543 (72%), Gaps = 25/543 (4%) Query 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 +AATVV++ W + P P+ P QLA+QPL LGGG ++REL QDTPFS+VALT Sbjct 15 LAATVVMLPWAISGGPDGDDSPA-MPAPQLAQQPLADLGGGESIRELHQDTPFSMVALTS 73 Query 61 -DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGT 119 D AGTSARVRAK+ DG WGPWY E EP + G D PGPR T+PVFVG Sbjct 74 EDFAGTSARVRAKKDDGSWGPWY----EAEPLEGVGAD--------LPGPRGTEPVFVGR 121 Query 120 TTTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPP 179 TTTVQVAVTRP DAP P A D LGY PA E P QNI+A+LISPPQAPP Sbjct 122 TTTVQVAVTRPSDAPPIGPAAAAHKPD--GPALGYIPANVESPLPQNITAVLISPPQAPP 179 Query 180 GTQWTP-PTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPL 238 P P A T AGQPP II+R EWGADE +RC P YD +RA VVHHTAGSN+Y+P Sbjct 180 --DLVPLPNAATPAGQPPRIINRVEWGADEGMRCGEPRYDTRIRAGVVHHTAGSNEYTPE 237 Query 239 ESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWG 298 +SAGIV++IY YH++TLGWCDIAYNA+VDKYGQVFEG AGG+ +PVEG HTGGFN NTWG Sbjct 238 DSAGIVRSIYEYHTRTLGWCDIAYNAMVDKYGQVFEGRAGGMNRPVEGAHTGGFNHNTWG 297 Query 299 VAMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLP 358 VAM+GNFD V PTPIQ+R LLGW LG VDP + V + S G S+T FP GA LP Sbjct 298 VAMLGNFDVVPPTPIQLRNTATLLGWVLGQAGVDPLATVVMPSEGGSFTKFPFGASPTLP 357 Query 359 AIFTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDP--PEELIKALEGGAIYQRWQALGGM 416 IFTHRDVGNT+CPGNAAYA+M +IRDIAA FNDP PE+L + L GGAI+ +W+ALGGM Sbjct 358 TIFTHRDVGNTECPGNAAYALMGQIRDIAARFNDPPGPEQLAETLRGGAIHAKWEALGGM 417 Query 417 NSALGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLP 476 NS LG PTSPEA RY TF GA+YWSP + A+P+TG +Y AW S +ERG LGLP Sbjct 418 NSYLGRPTSPEASGEGATRYVTFEHGAVYWSPESGAEPVTGELYNAWGSLGFERGALGLP 477 Query 477 TSAEIQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPP--EHFTLP 534 TSAEI EPL I QNFQHGTLNF+R TG VT V+DG+ P+ PP + P E FT P Sbjct 478 TSAEIPEPLWIVQNFQHGTLNFDRETGAVTRVIDGV--PVELPPPGADSTPVQLERFTPP 535 Query 535 THP 537 ++P Sbjct 536 SNP 538 >gi|108801985|ref|YP_642182.1| LGFP [Mycobacterium sp. MCS] gi|119871137|ref|YP_941089.1| LGFP repeat-containing protein [Mycobacterium sp. KMS] gi|126437966|ref|YP_001073657.1| LGFP repeat-containing protein [Mycobacterium sp. JLS] gi|108772404|gb|ABG11126.1| LGFP [Mycobacterium sp. MCS] gi|119697226|gb|ABL94299.1| LGFP repeat protein [Mycobacterium sp. KMS] gi|126237766|gb|ABO01167.1| LGFP repeat protein [Mycobacterium sp. JLS] Length=537 Score = 608 bits (1567), Expect = 1e-171, Method: Compositional matrix adjust. Identities = 327/545 (60%), Positives = 383/545 (71%), Gaps = 30/545 (5%) Query 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 +AAT+V++ W N P E + L EQPL GLGGG T+RE+ QDTPFS+VALT Sbjct 15 IAATLVLLPWAVNGLPGDDDESAAAGAPTLTEQPLAGLGGGETIREIHQDTPFSMVALTA 74 Query 61 -DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGT 119 DL GTSARVRAK+ DG WGPWY E EP + G + + R TDPVFVG Sbjct 75 EDLTGTSARVRAKKDDGSWGPWY----EAEPLEGVGEETAAR--------RGTDPVFVGR 122 Query 120 TTTVQVAVTRPIDAPITQPPAG--RPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQA 177 TTTVQ+AVTRP DAP + P R P+ LGY PAT EQPF QNI+A+LISPPQA Sbjct 123 TTTVQIAVTRPADAPPSAPAPAEHRGPD------LGYLPATVEQPFAQNINAVLISPPQA 176 Query 178 PPGTQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSP 237 P G P AV G PP II+R +WGADES+RC P YD VRA VVHHTAGSNDY+P Sbjct 177 P-GDTLPLPNAVMAPGVPPRIITRGQWGADESMRCGGPRYDAAVRAGVVHHTAGSNDYAP 235 Query 238 LESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTW 297 +SAG+V++IY YH++TLGWCD+ YNALVDK+GQVFEG AGG+ +PVE HTGGFN +TW Sbjct 236 EDSAGMVRSIYEYHTRTLGWCDLGYNALVDKFGQVFEGRAGGMDRPVEASHTGGFNTDTW 295 Query 298 GVAMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARL 357 GVAM+GNF+ V PTPIQ+RT GRLLGWRLG+D V+P L SAG S+T FP GA L Sbjct 296 GVAMMGNFEVVPPTPIQLRTTGRLLGWRLGLDRVNPMGTTVLTSAGGSFTHFPAGATPTL 355 Query 358 PAIFTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDP--PEELIKALEGGAIYQRWQALGG 415 P+IFTHRDVGNT+CPGNAAYA M E+R IAA FN P PE+L ++L GGAI+ RW +GG Sbjct 356 PSIFTHRDVGNTECPGNAAYAAMGELRAIAARFNAPPGPEDLAESLRGGAIFDRWAKMGG 415 Query 416 MNSALGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGL 475 M SALGAPTSPEA ARY F +GAMYWSP + A P+ GAIY+AW S +ERG LGL Sbjct 416 MASALGAPTSPEAAGEGTARYVRFQRGAMYWSPESGAAPVMGAIYDAWGSLGFERGALGL 475 Query 476 PTSAEIQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPP---EHFT 532 PTS EI EPL I QNFQHGTLNF+R VT V+DG+ L PP+ PP E FT Sbjct 476 PTSGEIHEPLWIKQNFQHGTLNFDREKATVTRVIDGVPLEL---PPASSHTPPVQLERFT 532 Query 533 LPTHP 537 P +P Sbjct 533 APINP 537 >gi|289755944|ref|ZP_06515322.1| predicted protein [Mycobacterium tuberculosis EAS054] gi|289696531|gb|EFD63960.1| predicted protein [Mycobacterium tuberculosis EAS054] Length=300 Score = 603 bits (1555), Expect = 2e-170, Method: Compositional matrix adjust. Identities = 298/299 (99%), Positives = 299/299 (100%), Gaps = 0/299 (0%) Query 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG Sbjct 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 Query 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT Sbjct 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 Query 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG Sbjct 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 Query 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES Sbjct 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 Query 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGV 299 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWG+ Sbjct 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGL 299 >gi|315446515|ref|YP_004079394.1| protein potentially involved in peptidoglycan biosynthesis [Mycobacterium sp. Spyr1] gi|315264818|gb|ADU01560.1| uncharacterized protein potentially involved in peptidoglycan biosynthesis [Mycobacterium sp. Spyr1] Length=532 Score = 591 bits (1524), Expect = 1e-166, Method: Compositional matrix adjust. Identities = 319/541 (59%), Positives = 383/541 (71%), Gaps = 17/541 (3%) Query 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALT- 59 +AATV+++ W + P +P+ L +QPL LGGG T+REL QDTPFS+VALT Sbjct 6 LAATVMLLPWAISGIPDGDEKPT-AGAPLLVQQPLTDLGGGETIRELHQDTPFSMVALTS 64 Query 60 GDLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGT 119 DL GTSARVRAK+ DG WG WY + EP + G D + GG+ R TDPVFVG Sbjct 65 ADLTGTSARVRAKKDDGSWGQWY----DVEPLEGVGAD-TPSPGGI----RGTDPVFVGR 115 Query 120 TTTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPP 179 TTTVQ+AVTRP DAP T+P A LGY PA EQP +N++A+LISPP+APP Sbjct 116 TTTVQIAVTRPDDAPATRPAAPAA-PAPTGPALGYVPANVEQPLAENVTAVLISPPEAPP 174 Query 180 GTQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLE 239 P A T AGQPP II+R EWGADE +RC P YD +RA V+HHTAGSN+Y P + Sbjct 175 DLG-PLPNAATPAGQPPRIINRVEWGADEGMRCGEPRYDNKIRAGVLHHTAGSNEYGPGD 233 Query 240 SAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGV 299 SAGI+++IY YH++TLGWCDIAYNA+VDKYGQVFEG AGG+T+PVEG HTGGFN NTWGV Sbjct 234 SAGIIRSIYEYHTRTLGWCDIAYNAMVDKYGQVFEGRAGGMTRPVEGAHTGGFNHNTWGV 293 Query 300 AMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPA 359 AM+GNF+ V PTPIQ+R RLLGW LG VDP V L S G S+T FP GA LPA Sbjct 294 AMLGNFEAVPPTPIQLRNTSRLLGWVLGQSGVDPLGSVVLPSEGGSFTKFPFGAPTTLPA 353 Query 360 IFTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDP--PEELIKALEGGAIYQRWQALGGMN 417 IFTHRDVGNT+CPG AAYA++ E+R+IAA FNDP PE+L + L GGAI+ +W++LGGMN Sbjct 354 IFTHRDVGNTECPGAAAYALLPEVRNIAARFNDPPGPEQLAETLRGGAIHAKWESLGGMN 413 Query 418 SALGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPT 477 S LG PTSPEA RY TF GA+YWSP T A+P+TG +Y+AW + +ERG LGLPT Sbjct 414 SYLGRPTSPEASGLGATRYVTFEHGAVYWSPETGAEPVTGELYKAWGALGFERGALGLPT 473 Query 478 SAEIQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHP 537 SAEI EPL I QNFQHGTLNF+R G VT V DG+ P+ P V E FT P++P Sbjct 474 SAEIAEPLWIVQNFQHGTLNFDREKGTVTRVTDGV--PVELPPADLNPVQLERFTPPSNP 531 Query 538 I 538 + Sbjct 532 V 532 >gi|145221749|ref|YP_001132427.1| LGFP repeat-containing protein [Mycobacterium gilvum PYR-GCK] gi|145214235|gb|ABP43639.1| LGFP repeat protein [Mycobacterium gilvum PYR-GCK] Length=541 Score = 590 bits (1522), Expect = 1e-166, Method: Compositional matrix adjust. Identities = 319/541 (59%), Positives = 383/541 (71%), Gaps = 17/541 (3%) Query 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALT- 59 +AATV+++ W + P +P+ L +QPL LGGG T+REL QDTPFS+VALT Sbjct 15 LAATVMLLPWAISGIPDGDEKPT-AGAPLLVQQPLTDLGGGETIRELHQDTPFSMVALTS 73 Query 60 GDLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGT 119 DL GTSARVRAK+ DG WG WY + EP + G D + GG+ R TDPVFVG Sbjct 74 ADLTGTSARVRAKKDDGSWGQWY----DVEPLEGVGAD-TPSPGGI----RGTDPVFVGR 124 Query 120 TTTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPP 179 TTTVQ+AVTRP DAP T+P A LGY PA EQP +N++A+LISPP+APP Sbjct 125 TTTVQIAVTRPDDAPATRPAAPAA-PAPTGPALGYVPANVEQPLAENVTAVLISPPEAPP 183 Query 180 GTQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLE 239 P A T AGQPP II+R EWGADE +RC P YD +RA V+HHTAGSN+Y P + Sbjct 184 DLG-PLPNAATPAGQPPRIINRVEWGADEGMRCGEPRYDNKIRAGVLHHTAGSNEYGPGD 242 Query 240 SAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGV 299 SAGI+++IY YH++TLGWCDIAYNA+VDKYGQVFEG AGG+T+PVEG HTGGFN NTWGV Sbjct 243 SAGIIRSIYEYHTRTLGWCDIAYNAMVDKYGQVFEGRAGGMTRPVEGAHTGGFNHNTWGV 302 Query 300 AMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPA 359 AM+GNF+ V PTPIQ+R RLLGW LG VDP V L S G S+T FP GA LPA Sbjct 303 AMLGNFEAVPPTPIQLRNTSRLLGWVLGQSGVDPLGSVVLPSEGGSFTKFPFGAPTTLPA 362 Query 360 IFTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDP--PEELIKALEGGAIYQRWQALGGMN 417 IFTHRDVGNT+CPG AAYA++ E+R+IAA FNDP PE+L + L GGAI+ +W++LGGMN Sbjct 363 IFTHRDVGNTECPGAAAYALLPEVRNIAARFNDPPGPEQLAETLRGGAIHAKWESLGGMN 422 Query 418 SALGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPT 477 S LG PTSPEA RY TF GA+YWSP T A+P+TG +Y+AW + +ERG LGLPT Sbjct 423 SYLGRPTSPEASGLGATRYVTFEHGAVYWSPETGAEPVTGELYKAWGALGFERGALGLPT 482 Query 478 SAEIQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTVPPEHFTLPTHP 537 SAEI EPL I QNFQHGTLNF+R G VT V DG+ P+ P V E FT P++P Sbjct 483 SAEIAEPLWIVQNFQHGTLNFDREKGTVTRVTDGV--PVELPPADLNPVQLERFTPPSNP 540 Query 538 I 538 + Sbjct 541 V 541 >gi|333992769|ref|YP_004525383.1| hypothetical protein JDM601_4129 [Mycobacterium sp. JDM601] gi|333488737|gb|AEF38129.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=551 Score = 558 bits (1438), Expect = 8e-157, Method: Compositional matrix adjust. Identities = 307/533 (58%), Positives = 365/533 (69%), Gaps = 35/533 (6%) Query 5 VVIVAWIANRPPAS-SHEPSPTP----NTQLAEQPLIGLGGGVTVRELTQDTPFSLVALT 59 ++I+ W + P S S +P P T+L +QPL LG GVTVRE+TQD PF++VALT Sbjct 1 MLILPWALDAGPGSKSAGTTPAPPSAAATKLNQQPLPDLGPGVTVREITQDEPFTMVALT 60 Query 60 G-DLAGTSARVRAKRPDGDWGPWYQTEYE-----TEPRDPAGTDGSVELGGLNPGPRSTD 113 G DL+GTSA+VRA+R DG WGPWY T +E ++PR PA PGP T+ Sbjct 61 GGDLSGTSAKVRARRADGSWGPWYATAHEVKDALSQPR-PADAPA--------PGPDGTE 111 Query 114 PVFVGTTTTVQVAVTRPIDA-----------PITQPPAG--RPPNDLLDSGLGYRPATKE 160 PVFVG TT VQ+A+TRP A P T AG P+ LGY PAT Sbjct 112 PVFVGRTTAVQIALTRPESADTKPESKAKPDPKTGAKAGPGSKPHSTPKPDLGYVPATAA 171 Query 161 QPFGQNISAILISPPQAPPGTQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRG 220 QPF QNISA+LI+PP+AP QWTPP+A GQPP II R++WGA RC P Sbjct 172 QPFAQNISAVLITPPKAPVDAQWTPPSAALAPGQPPNIIPRSQWGAGARGRCGKPAESGP 231 Query 221 VRAAVVHHTAGSNDYSPLESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGL 280 V+AAVVHHTAGSNDYSP +SA I++AIY YH++ LGWCDI YNALVDKYGQVFEG AGG+ Sbjct 232 VQAAVVHHTAGSNDYSPEDSAAIIRAIYAYHTRALGWCDIGYNALVDKYGQVFEGRAGGI 291 Query 281 TKPVEGFHTGGFNRNTWGVAMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQ 340 TK + G H GGFN+NTWGV+MIG FDD P PIQ+ TVGRLLGWRLG+D DPRS V L Sbjct 292 TKGIVGSHAGGFNKNTWGVSMIGTFDDAPPPPIQLETVGRLLGWRLGLDRTDPRSTVQLT 351 Query 341 SAGSSYTTFPGGAIARLPAIFTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDP--PEELI 398 S G S+T FP G+ LPAI HRD+ T+CPG Y ++EIRDIAA F DP PE+L+ Sbjct 352 SGGGSFTHFPRGSALSLPAIIGHRDLDETECPGEHGYVALNEIRDIAARFGDPPGPEDLV 411 Query 399 KALEGGAIYQRWQALGGMNSALGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGA 458 + ++GGAI+ RW LGG LGAPTSPEA +YATF +GA+YWSP T AQPITGA Sbjct 412 RTMQGGAIHARWLELGGAAGLLGAPTSPEAIGEGSTKYATFERGAVYWSPETGAQPITGA 471 Query 459 IYEAWASQSYERGPLGLPTSAEIQEPLQITQNFQHGTLNFERLTGNVTEVVDG 511 IY+AWA+ YERG LGLPTSAEI EP I QNFQHGTLN+ R G+V V+DG Sbjct 472 IYDAWAALGYERGMLGLPTSAEIPEPEWIGQNFQHGTLNYNRADGSVIRVIDG 524 >gi|289763996|ref|ZP_06523374.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289711502|gb|EFD75518.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=275 Score = 543 bits (1400), Expect = 2e-152, Method: Compositional matrix adjust. Identities = 271/275 (99%), Positives = 271/275 (99%), Gaps = 0/275 (0%) Query 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG Sbjct 1 MAATVVIVAWIANRPPASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALTG 60 Query 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT Sbjct 61 DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTT 120 Query 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG Sbjct 121 TTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPG 180 Query 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES Sbjct 181 TQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLES 240 Query 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEG 275 AGIVKAIYTYHSKTLGWCDIAYNALVDKYG G Sbjct 241 AGIVKAIYTYHSKTLGWCDIAYNALVDKYGPGVRG 275 >gi|169627273|ref|YP_001700922.1| putative N-acetymuramoyl-L-alanine amidase [Mycobacterium abscessus ATCC 19977] gi|169239240|emb|CAM60268.1| Putative N-acetymuramoyl-L-alanine amidase [Mycobacterium abscessus] Length=581 Score = 480 bits (1235), Expect = 3e-133, Method: Compositional matrix adjust. Identities = 256/499 (52%), Positives = 323/499 (65%), Gaps = 24/499 (4%) Query 43 TVRELTQDTPFSLVALTG-DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVE 101 TV ++ Q FSL+A+ G DL+ VRA++ DG WG WY+ + E DPA + Sbjct 69 TVHDIQQADSFSLIAVRGEDLSSLDVSVRAQQTDGSWGQWYELD-PVESGDPAAEHKGI- 126 Query 102 LGGLNPGPRSTDPVFVGTTTTVQVAVTRPIDAPITQPPAG--RPPNDLLDSGLGYRPATK 159 P +T+PVFVG+T + QVAV A + P R P D+GLGYRPA+ Sbjct 127 -------PAATEPVFVGSTHSAQVAVQPKYGANVKSPKTDNRRTP---ADAGLGYRPASI 176 Query 160 EQPFGQNISAILISPPQAPPGT-----QWTPPTAVTMAGQPPAIISRAEWGADESLRCET 214 EQP + AILISP APP +W+ P A+ AG P II+RA+WGA+ES RC Sbjct 177 EQPLTTGLDAILISPKLAPPDAARFEERWSAPVALPQAG--PRIITRAQWGANESDRC-P 233 Query 215 PEYDRGVRAAVVHHTAGSNDYSPLESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFE 274 P Y+R VRA VVHHTAGSN+YSP +SA I++AIY YH+KTL WCDIAYN LVDKYGQ+FE Sbjct 234 PVYNRDVRAGVVHHTAGSNNYSPYDSAAIIRAIYAYHTKTLKWCDIAYNVLVDKYGQIFE 293 Query 275 GSAGGLTKPVEGFHTGGFNRNTWGVAMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPR 334 G GG+T V+G HTGGFN ++WG+A+IG+F P+P ++ GR+LGWRL + VDPR Sbjct 294 GRFGGITNNVQGAHTGGFNEHSWGIALIGDFTRDEPSPAMLQAAGRILGWRLRLAGVDPR 353 Query 335 SMVDLQSAGSSYTTFPGGAIARLPAIFTHRDVGNTDCPGNAAYAVMDEIRDIAA-HFNDP 393 VDL S G +TT PGG + LP IFTHRDVGNT+CPG AAY ++ +RDIAA N Sbjct 354 GQVDLASEGGPFTTVPGGKVVTLPTIFTHRDVGNTECPGEAAYRLIPRLRDIAAGAANGE 413 Query 394 PEELIKALEGGAIYQRWQALGGMNSALGAPTSPEADAADGARYATFAKGAMYWSPVTDAQ 453 P +L+ +L GGAIY W LG S LGAPTS E A AR+ATF GAMY+SP T A Sbjct 414 PPDLVDSLRGGAIYDTWTRLGSAESDLGAPTSVEQQAVGEARFATFRNGAMYFSPGTGAH 473 Query 454 PITGAIYEAWASQSYERGPLGLPTSAEIQEPLQITQNFQHGTLNFERLTGNVTEVVDGIT 513 P+ GAIY AWA +ERGPLGLP + EI EP I QNFQ+G+L ++R +G V+ V++G T Sbjct 474 PVVGAIYHAWAETDFERGPLGLPVTDEIGEPNIIVQNFQNGSLIYDRASGRVSSVINGET 533 Query 514 TPLATRPPSGPTVPPEHFT 532 + P PE F+ Sbjct 534 REILGVAPVAQNALPEQFS 552 >gi|126437047|ref|YP_001072738.1| LGFP repeat-containing protein [Mycobacterium sp. JLS] gi|126236847|gb|ABO00248.1| LGFP repeat protein [Mycobacterium sp. JLS] Length=370 Score = 410 bits (1053), Expect = 3e-112, Method: Compositional matrix adjust. Identities = 212/366 (58%), Positives = 253/366 (70%), Gaps = 6/366 (1%) Query 170 ILISPPQAPPGTQWTPPTAVTMAGQPPA-IISRAEWGADESLRCETPEYDRGVRAAVVHH 228 +LI P+A + P +A T PP IISR++WGADESLR P YD +RA ++HH Sbjct 1 MLIGTPRA---SAEPPLSADTATATPPVPIISRSQWGADESLRRAAPVYDNAIRAGIIHH 57 Query 229 TAGSNDYSPLESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFH 288 +A N+Y+P ESA IV++IY YH++++GW DIAYNALVDK+GQVFEG GGL KPVEG H Sbjct 58 SATGNNYAPHESAAIVRSIYAYHTRSMGWADIAYNALVDKHGQVFEGRFGGLDKPVEGSH 117 Query 289 TGGFNRNTWGVAMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTT 348 TGGFN++TW V +IG+F PT Q+R+VGRLLGWRL + VDPR V L S G YT Sbjct 118 TGGFNKDTWAVCLIGDFGKEVPTSAQLRSVGRLLGWRLALGGVDPRGAVALTSGGGPYTR 177 Query 349 FPGGAIARLPAIFTHRDVGNTDCPGNAAYAVMDEIRDIAAHFNDPP--EELIKALEGGAI 406 F G LP+IF HRDVG+T CPGNAAYA +D IRDIAA FN PP E++ ++L GGAI Sbjct 178 FRQGMTRTLPSIFAHRDVGDTACPGNAAYAFLDRIRDIAARFNQPPTTEDVEESLRGGAI 237 Query 407 YQRWQALGGMNSALGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQ 466 Y RWQALGG + LG SPEA A ARY F GA+YWSP T AQP+TGAIY+AWA+ Sbjct 238 YARWQALGGASGVLGPVRSPEAPGAGQARYVIFTHGAIYWSPATGAQPLTGAIYDAWATL 297 Query 467 SYERGPLGLPTSAEIQEPLQITQNFQHGTLNFERLTGNVTEVVDGITTPLATRPPSGPTV 526 YER LGLPTS +I EP I QNFQHGTLN +R G VT V DG L P GP V Sbjct 298 GYERSTLGLPTSGQIHEPQWIVQNFQHGTLNMDRENGAVTIVTDGQPRVLPPPAPGGPPV 357 Query 527 PPEHFT 532 E F+ Sbjct 358 QLERFS 363 >gi|54022135|ref|YP_116377.1| hypothetical protein nfa1710 [Nocardia farcinica IFM 10152] gi|54013643|dbj|BAD55013.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=750 Score = 379 bits (972), Expect = 1e-102, Method: Compositional matrix adjust. Identities = 218/493 (45%), Positives = 284/493 (58%), Gaps = 46/493 (9%) Query 41 GVTVRELTQDTPFSLVALTG-DLAGTSARVRAKRPDGDWGPWYQT---EYETEPRDPAG- 95 G V+EL+QDTPFS+VALT DLA T+A VRA++PDG WGPWY+ + + R PAG Sbjct 197 GAQVKELSQDTPFSMVALTAADLANTTAMVRARQPDGSWGPWYEAAALDTRRDDRTPAGP 256 Query 96 TDGSVELGGLNPGPRSTDPVFVGTTTTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYR 155 T+G T+P++VG TT VQ+ VTR +P A +P + G Sbjct 257 TNG-------------TEPIYVGETTAVQILVTR-------KPAATQPQTSSAAAQSGGI 296 Query 156 PATKEQP-FGQNISAILISPPQAPPGTQWTPPTAVTMAGQPPAIISRAEWGADESLRCET 214 A E P +++A+LI P + P + A + G P +I+RA+WGADES+ C+ Sbjct 297 AAIAEDPAHTPDLTAVLIDPGRGPLDGALSD-IATALPGGGPNVITRAQWGADESINCQE 355 Query 215 PEYDRGVRAAVVHHTAGSNDYSPLESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFE 274 P YD G+ VHHTAG NDYS ESAGIV+AIYTYHS+TLGWCDI YNALVDKYGQ+FE Sbjct 356 PTYDDGLGGVTVHHTAGRNDYSKAESAGIVRAIYTYHSQTLGWCDIGYNALVDKYGQIFE 415 Query 275 GSAGGLTKPVEGFHTGGFNRNTWGVAMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPR 334 G GGL +PV+G H GGFN NT GVA++GN + APT I +GR +GWR + +DP+ Sbjct 416 GRRGGLDRPVQGAHAGGFNENTSGVALMGNHESEAPTDAAIDAIGRFIGWRTRIAGLDPK 475 Query 335 SMVDLQSAGSSYTTFPGGAIARLPAIFTHRDVGNTDCPGNAAYAVMDEIRDIA------- 387 + S G+ +T + G RLP +F HRDVGNT CPG+AAY++MD IRDIA Sbjct 476 GYTTMYSEGTEFTPYAEGEEVRLPIVFAHRDVGNTSCPGDAAYSMMDRIRDIAAGAPGSS 535 Query 388 ------------AHFNDPPEELIKALEGGAIYQRWQALGGMNSALGAPTSPEADAADGAR 435 A + L+ + I + + A GG LGA S AA G + Sbjct 536 GSEAPRRTQSDLAALAELTARLLSMVNDNLIAKHYAATGGPEGPLGAAQSEPLPAAQGQQ 595 Query 436 YATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAEIQEPLQITQNFQHGT 495 YA F G +Y SP A + GAI E + + G LGLP S+ P + +FQ+G+ Sbjct 596 YAKFVNGYVYTSPQGQAVEVVGAILERFLQLGADAGILGLPLSSPYPVPDGLRSDFQNGS 655 Query 496 LNFERLTGNVTEV 508 L LTG VT V Sbjct 656 LILNNLTGIVTTV 668 >gi|229492589|ref|ZP_04386392.1| lgfp repeat protein [Rhodococcus erythropolis SK121] gi|229320575|gb|EEN86393.1| lgfp repeat protein [Rhodococcus erythropolis SK121] Length=657 Score = 353 bits (906), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 205/525 (40%), Positives = 287/525 (55%), Gaps = 67/525 (12%) Query 41 GVTVRELTQDTPFSLVALTGD-LAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGS 99 G V+E+T+DTPFS+VALT D +A ++VRA DG WGPW+ + D A +D + Sbjct 126 GAVVKEVTRDTPFSMVALTSDTIASAQSKVRALAEDGTWGPWFTPD----AIDSASSDQA 181 Query 100 VELGGLNPGPRSTDPVFVGTTTTVQVAVTRPIDAPITQPPAGRPPNDLLDSG-------- 151 G +T+PVFVG T ++Q+ + AP + P Sbjct 182 TNSG------TATEPVFVGATKSIQILTPQGAAAPAAEVVPAPAPEAAPAPAPEAAPAEA 235 Query 152 ------LGYRPATKEQPFGQ------NISAILISPPQAPPGTQWTPPTAVTMAGQPPAII 199 LGY PA+ +P Q ++A+LI P + + A + G P++I Sbjct 236 PAATGELGYTPASVSKPLRQVTTAADAVTAVLIDPGASEADSNLQA-VAAPLGGSGPSVI 294 Query 200 SRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLESAGIVKAIYTYHSKTLGWCD 259 +RA+WGADESLRC++P YD + A VHHTAGSN+Y+ ESAGIV++IY YH++TLGWCD Sbjct 295 TRAQWGADESLRCDSPTYDDFIGGATVHHTAGSNNYTKAESAGIVRSIYAYHAQTLGWCD 354 Query 260 IAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVAMIGNFDDVAPTPIQIRTVG 319 + YN LVDKYGQ FEG AGGL K V+G H GGFN NT G+AM+G++ V P+ + VG Sbjct 355 VGYNVLVDKYGQTFEGRAGGLDKAVQGAHAGGFNENTTGIAMMGDYSTVEPSQATLNAVG 414 Query 320 RLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAIFTHRDVGNTDCPGNAAYAV 379 + LGW+LGM +DP+ + S G+ +T +P GA LP IF HRDVGNT CPG+AAYA Sbjct 415 KFLGWKLGMAGLDPKGRTTMYSEGTEFTPYPQGAAVDLPIIFAHRDVGNTACPGDAAYAH 474 Query 380 MDEIRDIAA-----------------------------------HFNDPPEELIKALEGG 404 M++IR+IAA D ++++ + Sbjct 475 MNDIRNIAAANIGGTLNPSNPSNPSTPAPKPTTPVDTVTGGTGSSIPDLVTQILQITDNS 534 Query 405 AIYQRWQALGGMNSALGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWA 464 + Q+W A GG LG S A G + A F GA+Y SP + G I+++W Sbjct 535 PLAQKWIAEGGEIGRLGQALSGILQAKLGNQGALFQNGAVYTSPNGGVFTVLGEIFKSWQ 594 Query 465 SQSYERGPLGLPTSAEIQEPLQITQNFQHGTLNFERLTGNVTEVV 509 S + G LGLP S E P + +F++G+L F ++TG VT+V+ Sbjct 595 SFGSDAGELGLPISDEYSIPDGLRSDFENGSLIFNQITGMVTKVL 639 >gi|226363338|ref|YP_002781120.1| hypothetical protein ROP_39280 [Rhodococcus opacus B4] gi|226241827|dbj|BAH52175.1| hypothetical protein [Rhodococcus opacus B4] Length=717 Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 208/524 (40%), Positives = 276/524 (53%), Gaps = 66/524 (12%) Query 41 GVTVRELTQDTPFSLVALTGD-LAGTSARVRAKRPDGDWGPWYQTEY-ETEPRDPAGTDG 98 G V+EL++DTPFS+VALT + LA ++VRA + DG WG W + +T D +DG Sbjct 134 GAIVKELSRDTPFSMVALTSETLASAESKVRALQADGTWGQWVSPDMIDTRRTDKTASDG 193 Query 99 SVELGGLNPGPRSTDPVFVGTTTTVQV---------AVTRPIDAPITQPPAGRPPNDLLD 149 +V +T+PV+VG T +Q+ A P Sbjct 194 TV----------ATEPVYVGLTKAIQILTPTSAPAPAGAPGAVPAPAPEAPAPAPAADGA 243 Query 150 SGLGYRPATKEQPFGQ--------NISAILISPPQAPPGTQWTPPTAVTMAGQPPAIISR 201 + LGY PA P Q +++A+LI P P G A + P +ISR Sbjct 244 APLGYTPAAVNTPLRQQPARAGADDVTAVLIEPGSGP-GDANLSDNASPLDSGGPKVISR 302 Query 202 AEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLESAGIVKAIYTYHSKTLGWCDIA 261 +WGADES+RC+ P+YD + A VHHTAG+NDYS ESA IV+AIY YH++TLGWCDI Sbjct 303 QQWGADESIRCQDPDYDDFIGGATVHHTAGANDYSKAESAEIVRAIYAYHAQTLGWCDIG 362 Query 262 YNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVAMIGNFDDVAPTPIQIRTVGRL 321 YNALVDKYGQ+FEG AGGL +PV+G H GGFN NT GVAM+G+F P + VG+ Sbjct 363 YNALVDKYGQIFEGRAGGLDRPVQGAHAGGFNENTTGVAMMGDFSSEDPPQATLDAVGKF 422 Query 322 LGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAIFTHRDVGNTDCPGNAAYAVMD 381 LGW+LG +DP + S G+ +T + G LP IF HRDVGNT CPG+AAY+ MD Sbjct 423 LGWKLGKAGLDPLGETTMYSEGTEFTPYAEGEAVDLPVIFAHRDVGNTSCPGDAAYSHMD 482 Query 382 EIRDIAAH---------FNDPP---------------------------EELIKALEGGA 405 EIR IAA +D P EL++ + Sbjct 483 EIRQIAAANRGGGNASLASDAPASEAPAPSGGPGTDASASLGAGIPALVNELLRLTDPSP 542 Query 406 IYQRWQALGGMNSALGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEAWAS 465 + Q+W A GG LG + A G A F GA++ SP + G I++ W S Sbjct 543 VAQKWVAEGGDTGRLGQAITGLLQAKAGNSGAEFTNGAIFTSPNGGVWAVLGQIFKTWQS 602 Query 466 QSYERGPLGLPTSAEIQEPLQITQNFQHGTLNFERLTGNVTEVV 509 + G LGLPTS E P + +F++G+L F LTG VT+V+ Sbjct 603 LGADNGELGLPTSDEYTIPGGLRTDFENGSLIFNELTGIVTKVL 646 >gi|226303693|ref|YP_002763651.1| hypothetical protein RER_02040 [Rhodococcus erythropolis PR4] gi|226182808|dbj|BAH30912.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=665 Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 204/533 (39%), Positives = 283/533 (54%), Gaps = 75/533 (14%) Query 41 GVTVRELTQDTPFSLVALTGD-LAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGS 99 G V+E+T+DTPFS+VALT D LA ++VRA DG WGPW+ + D A +D + Sbjct 126 GAVVKEVTRDTPFSMVALTSDTLASAQSKVRALAEDGTWGPWFTPD----AIDSASSDQA 181 Query 100 VELGGLNPGPRSTDPVFVGTTTTVQVAVTRPIDAPITQPPAGRPPNDLLDSG-------- 151 G +T+PVFVG T ++Q+ + + AP + Sbjct 182 TNAG------TATEPVFVGATKSIQILTPQGVAAPAVEAVPAPEAAPAPVEAPAEAPVPA 235 Query 152 --------------LGYRPATKEQPFGQNISAI------LISPPQAPPGTQWTPPTAVTM 191 LGY PA+ +P Q +A LI P + + A + Sbjct 236 EAPVPAEAPAATGELGYTPASVSKPLRQATTAADAVTAVLIDPGTSDADSNLQA-VAAPL 294 Query 192 AGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLESAGIVKAIYTYH 251 G P++I+RA+WGADESLRC++P YD A VHHTAGSN+Y+ ESAGIV++IY YH Sbjct 295 GGSGPSVITRAQWGADESLRCDSPTYDDFTGGATVHHTAGSNNYTKEESAGIVRSIYAYH 354 Query 252 SKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVAMIGNFDDVAPT 311 ++TLGWCD+ YN LVDKYGQ FEG AGGL K V+G H GGFN NT G+AM+G++ V P+ Sbjct 355 ARTLGWCDVGYNVLVDKYGQTFEGRAGGLDKAVQGAHAGGFNENTTGIAMMGDYSTVEPS 414 Query 312 PIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAIFTHRDVGNTDC 371 + VG+ LGW+LG+ +DP+ + S G+ +T +P GA LP IF HRDVGNT C Sbjct 415 QATLNAVGKFLGWKLGLAGLDPKGRTTMYSEGTEFTPYPQGAAVDLPIIFAHRDVGNTAC 474 Query 372 PGNAAYAVMDEIRDIAA-----------------------------------HFNDPPEE 396 PG+AAYA M++IR+IAA D + Sbjct 475 PGDAAYAHMNDIRNIAAANIGGSLNPSNPSNPSTPAPKPTTPVDTVTGGTGSSIPDLVTQ 534 Query 397 LIKALEGGAIYQRWQALGGMNSALGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPIT 456 ++K + + Q+W A GG LG S A G + A F GA+Y SP + Sbjct 535 ILKITDNSPLAQKWIAEGGDLGRLGQALSGILQAKLGNQGALFQNGAVYTSPNGGVFTVL 594 Query 457 GAIYEAWASQSYERGPLGLPTSAEIQEPLQITQNFQHGTLNFERLTGNVTEVV 509 G I+++W S + G LGLP S E P + +F++G+L F ++ G VT+V+ Sbjct 595 GEIFKSWQSFGSDAGELGLPISDEYSIPDGLRSDFENGSLIFNQIAGMVTKVL 647 >gi|111021033|ref|YP_704005.1| hypothetical protein RHA1_ro04050 [Rhodococcus jostii RHA1] gi|110820563|gb|ABG95847.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=714 Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 208/528 (40%), Positives = 277/528 (53%), Gaps = 70/528 (13%) Query 41 GVTVRELTQDTPFSLVALTGD-LAGTSARVRAKRPDGDWGPWYQTEY-ETEPRDPAGTDG 98 G V+EL++DTPFS+VALT + LA ++VRA + DG WG W + +T D +DG Sbjct 134 GAIVKELSRDTPFSMVALTSETLASAESKVRALQADGTWGQWVSPDMIDTRRTDKTASDG 193 Query 99 SVELGGLNPGPRSTDPVFVGTTTTVQV-------------AVTRPIDAPITQPPAGRPPN 145 V +T+PV+VG T +Q+ A P P Sbjct 194 KV----------ATEPVYVGLTKAIQILTPTSTPAAAGAPAAVPAPAPAPEAPAPAPAPA 243 Query 146 DLLDSGLGYRPATKEQPFGQ--------NISAILISPPQAPPGTQWTPPTAVTMAGQPPA 197 + LGY PA P Q +++A+LI P P G A + P Sbjct 244 AGGAAPLGYTPAAVNTPLRQQPARAGADDVTAVLIEPGSGP-GDATLGDIASPLDSGGPK 302 Query 198 IISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLESAGIVKAIYTYHSKTLGW 257 +ISR +WGADES+RC+ P+YD + A VHHTAG+NDYS ESA IV+AIY YH++TLGW Sbjct 303 VISRQQWGADESIRCQDPDYDDFIGGATVHHTAGANDYSKAESAEIVRAIYAYHAQTLGW 362 Query 258 CDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVAMIGNFDDVAPTPIQIRT 317 CDI YNALVDKYGQ+FEG AGGL +PV+G H GGFN NT GVAM+G+F P + Sbjct 363 CDIGYNALVDKYGQIFEGRAGGLDRPVQGAHAGGFNENTTGVAMMGDFSSEDPPQATLDA 422 Query 318 VGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAIFTHRDVGNTDCPGNAAY 377 VG+ LGW+LG +DP + S G+ +T + G LP IF HRDVGNT CPG+AAY Sbjct 423 VGKFLGWKLGKAGLDPLGETTMYSEGTEFTPYAEGEAVDLPVIFAHRDVGNTSCPGDAAY 482 Query 378 AVMDEIRDIAAHF---------NDPP---------------------------EELIKAL 401 + MDEIR IAA +D P EL++ Sbjct 483 SHMDEIRQIAAASLGGGNASLASDAPAGEAPAPSGGPGTDASASLGAGIPALVNELLRLT 542 Query 402 EGGAIYQRWQALGGMNSALGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYE 461 + + Q+W A GG LG + A G A FA GA++ SP + G I++ Sbjct 543 DPSPVAQKWVAEGGDTGRLGQALTGLLQAKAGNSGAQFANGAIFTSPNGGVWAVLGQIFK 602 Query 462 AWASQSYERGPLGLPTSAEIQEPLQITQNFQHGTLNFERLTGNVTEVV 509 W + + G LGLPTS E P + +F++G+L F +TG VT+V+ Sbjct 603 TWQNLGADNGELGLPTSDEYPIPGGLRTDFENGSLIFNEITGIVTKVL 650 >gi|325675158|ref|ZP_08154844.1| Csp protein [Rhodococcus equi ATCC 33707] gi|325554119|gb|EGD23795.1| Csp protein [Rhodococcus equi ATCC 33707] Length=683 Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 200/549 (37%), Positives = 278/549 (51%), Gaps = 99/549 (18%) Query 41 GVTVRELTQDTPFSLVALTG-DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGS 99 G TV+E+TQDTPFS+V +T DL + ++RAK DG WG W P DGS Sbjct 130 GATVKEVTQDTPFSMVGVTAADLQSSVTQLRAKLADGSWGEWIT---------PDLIDGS 180 Query 100 VELGGLNPGPRSTDPVFVGTTTTVQVAVTRPIDAP-----ITQPPAGRPPND-------- 146 G + T+PVFVG T VQ+ VT P D T+ PA P D Sbjct 181 SN------GKQGTEPVFVGDTNAVQILVT-PKDGAAGAAGTTEAPAVTDPTDPALRAPGA 233 Query 147 ----------------LLDSG--LGYRPATKEQPFGQ------NISAILISP---PQAPP 179 D+ LGY PA +P Q +++A+LI+P PQ Sbjct 234 AEAPEAPAAEAPAPQEESDATQPLGYTPAAVSKPLRQATLTANDVAAVLINPGSGPQDAN 293 Query 180 GTQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLE 239 PT+V IISR WGA+E +RC+ P YD A VHHTA +N+Y+ + Sbjct 294 LADIATPTSVNGVN----IISRKAWGANEGIRCQNPTYDDSTGGATVHHTAETNNYTREQ 349 Query 240 SAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGV 299 SAGIV+ IY YH+++LGWCDI YN LVD++GQ+FEG GGL +PV+G H GGFN NT G+ Sbjct 350 SAGIVRGIYAYHAQSLGWCDIGYNVLVDRFGQIFEGRFGGLDRPVQGAHAGGFNENTVGI 409 Query 300 AMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPA 359 AM+GNF + I +VG+ LGWRL + +++P+ V + S G+ Y+ +P G LP Sbjct 410 AMMGNFVNEPAPAATIESVGKYLGWRLKLANLNPKGQVTMYSEGTQYSKYPLGQRVVLPT 469 Query 360 IFTHRDVGNTDCPGNAAYAVMDEIRDIAA---------HFNDPPEE-------------- 396 IF HRDVG T+CPG+AAYA MD+IR+IAA + PP Sbjct 470 IFAHRDVGYTECPGSAAYAQMDQIRNIAAANYGGNTGGGGSTPPTNPSNGGGNNGGANPV 529 Query 397 ---------------LIKALEGGAIYQRWQALGGMNSALGAPTSPEADAADGARYATFAK 441 ++ + I ++W A+GG S +G + A G YA F Sbjct 530 GSLDLNAQIPAVVNGILSIADSNPIARQWLAMGGNRSMVGDAITGLLTTATGQLYAFFQN 589 Query 442 GAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAEIQEPLQITQNFQHGTLNFERL 501 G ++ SP+ + G I+E W + +GLP S E +F+ G++ F+ + Sbjct 590 GGIFTSPLGGVVTMIGKIFEQWTAAGGVMSDIGLPISDEYSVDGGKRSDFERGSMIFDEV 649 Query 502 TGNVTEVVD 510 TG VT +++ Sbjct 650 TGQVTTIMN 658 >gi|312137692|ref|YP_004005028.1| n-acetylmuramoyl-l-alanine amidase lytc [Rhodococcus equi 103S] gi|311887031|emb|CBH46340.1| putative N-acetylmuramoyl-L-alanine amidase LytC [Rhodococcus equi 103S] Length=683 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 200/549 (37%), Positives = 277/549 (51%), Gaps = 99/549 (18%) Query 41 GVTVRELTQDTPFSLVALTG-DLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGS 99 G TV+E+TQDTPFS+V +T DL + ++RAK DG WG W P DGS Sbjct 130 GATVKEVTQDTPFSMVGVTAADLQSSVTQLRAKLADGSWGEWIT---------PDLIDGS 180 Query 100 VELGGLNPGPRSTDPVFVGTTTTVQVAVTRPIDAP-----------ITQP--PAGRPPND 146 G + T+PVFVG T VQ+ VT P D +T P PA R P Sbjct 181 SN------GKQGTEPVFVGDTNAVQILVT-PKDGAAGAAGTAEAPAVTDPTDPALRAPGA 233 Query 147 LLDSG------------------LGYRPATKEQPFGQ------NISAILISP---PQAPP 179 LGY PA +P Q +++A+LI+P PQ Sbjct 234 AEAPEAPAAEAPAPQEESDATQPLGYTPAAVSKPLRQATLTANDVAAVLINPGSGPQDAN 293 Query 180 GTQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLE 239 PT+V IISR WGA+E +RC+ P YD A VHHTA +N+Y+ + Sbjct 294 LADIATPTSVNGVN----IISRKAWGANEGIRCQNPTYDDSTGGATVHHTAETNNYTREQ 349 Query 240 SAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGV 299 SAGIV+ IY YH+++LGWCDI YN LVD++GQ+FEG GGL +PV+G H GGFN NT G+ Sbjct 350 SAGIVRGIYAYHAQSLGWCDIGYNVLVDRFGQIFEGRFGGLDRPVQGAHAGGFNENTVGI 409 Query 300 AMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPA 359 AM+GNF + I +VG+ LGWRL + +++P+ V + S G+ Y+ +P G LP Sbjct 410 AMMGNFVNEPAPAATIESVGKYLGWRLKLANLNPKGQVTMYSEGTQYSKYPLGQRVVLPT 469 Query 360 IFTHRDVGNTDCPGNAAYAVMDEIRDIAA---------HFNDPPEE-------------- 396 IF HRDVG T+CPG+AAYA MD+IR+IAA + PP Sbjct 470 IFAHRDVGYTECPGSAAYAQMDQIRNIAAANYGGNTGGGGSTPPTNPSNGGGNNGGANPV 529 Query 397 ---------------LIKALEGGAIYQRWQALGGMNSALGAPTSPEADAADGARYATFAK 441 ++ + I ++W A+GG S +G + A G YA F Sbjct 530 GSLDLNAQIPAVVNGILSIADSNPIARQWLAMGGNRSMVGDAITGLLTTATGQLYAFFQN 589 Query 442 GAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAEIQEPLQITQNFQHGTLNFERL 501 G ++ SP+ + G I+E W + +GLP S E +F+ G++ F+ + Sbjct 590 GGIFTSPLGGVVTMIGKIFEQWTAAGGVMSDIGLPISDEYSVDGGKRSDFERGSMIFDEV 649 Query 502 TGNVTEVVD 510 TG VT +++ Sbjct 650 TGQVTTIMN 658 >gi|54027686|ref|YP_121927.1| hypothetical protein pnf1380 [Nocardia farcinica IFM 10152] gi|54019194|dbj|BAD60563.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=429 Score = 280 bits (715), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 157/394 (40%), Positives = 214/394 (55%), Gaps = 38/394 (9%) Query 167 ISAILISPPQAPPGTQWTPPTAVTMAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVV 226 +SA+L+ P + G + A + G P +ISRA+WGADES+RCE P YD G+ VV Sbjct 1 MSAVLLDPGR---GEENLSAIAAPLTGGGPRVISRAQWGADESIRCEDPTYDDGLGGIVV 57 Query 227 HHTAGSNDYSPLESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEG 286 HHTAG NDYS ESA IV+ IY YH++TLGWCDI Y+ALVDKYGQ+FEG GGL +PV+G Sbjct 58 HHTAGRNDYSKAESAAIVRGIYAYHAETLGWCDIGYHALVDKYGQIFEGHFGGLDRPVQG 117 Query 287 FHTGGFNRNTWGVAMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSY 346 HTGGFN NT GVA +G+ + PT I +G+ +GWR + +DPR + S G+ + Sbjct 118 AHTGGFNENTAGVAFMGDHESEEPTQAAITAMGQFIGWRARVAGLDPRGTTTMISEGTEF 177 Query 347 TTFPGGAIARLPAIFTHRDVGNTDCPGNAAYAVMDEIRDIAAHFND---PPE-------- 395 T + G +LP +F+HRDVGNT C G+AAYA+MD IR IAA + P + Sbjct 178 TPYGEGEQVQLPVVFSHRDVGNTTCAGDAAYALMDRIRAIAAGVSSGAGPRQAPGGQDSA 237 Query 396 ----------------------ELIKALEGGAIYQRWQALGGMNSALGAPTSPEADAADG 433 +L+ ++ + +RW GG LG S A+G Sbjct 238 PAPAQPDADADADVSALAVLTGKLLDLVDRNVLARRWVDAGGPQGRLGLAASEPVPTAEG 297 Query 434 ARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAEIQEPLQITQNFQH 493 +YA F G ++ +P + G I + +A + G LG P S E P + +F Sbjct 298 GQYARFVNGYLFQAPDGQVYEVAGRIGQRFAQLGGDNGVLGAPRSNEYPVPGGVRVDFGR 357 Query 494 GTLNFERLTGNVTEVVDGITTPLATRPPSGPTVP 527 G+L F TG VT + G+ P + P P Sbjct 358 GSLVFNEATGVVTTL--GLPQPASDHPTQSAASP 389 >gi|305680429|ref|ZP_07403237.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium matruchotii ATCC 14266] gi|305659960|gb|EFM49459.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium matruchotii ATCC 14266] Length=703 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 150/355 (43%), Positives = 203/355 (58%), Gaps = 50/355 (14%) Query 43 TVRELTQDTPFSLVALTGD-LAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVE 101 TV+E +D FS LT D +A VR +R DG W PW+ T DP ++ Sbjct 81 TVKEFKRDEAFSQFGLTWDGKKDIAAFVRGQRADGTWTPWFDT-------DP------LD 127 Query 102 LGGLNPGPRS-TDPVFVGTTTTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKE 160 G P R TD +++ T TVQV++ AG DLL + Sbjct 128 YGSSKPFERKGTDLIYIEPTNTVQVSI------------AGV---DLL-----------K 161 Query 161 QPFGQNISAILISPPQAPPGTQWTPPTAVTMAGQP---PAIISRAEWGADESLRCETPEY 217 ++++A+ I ++ P + + +A P +ISRAEWGADESLRCE PEY Sbjct 162 DKTAKDLNAVFIDGGKSTP-----TDSGIKLAADSDGLPKVISRAEWGADESLRCEEPEY 216 Query 218 DRGVRAAVVHHTAGSNDYSPLESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSA 277 A V+HHTAGSN+YS E+AGIV+ IY YH++ LGWCDI Y++L DK+G ++EG Sbjct 217 TDHTSAIVIHHTAGSNNYSEDEAAGIVRGIYKYHAQQLGWCDIGYHSLADKFGNLYEGHY 276 Query 278 GGLTKPVEGFHTGGFNRNTWGVAMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMV 337 GG+ K V G HTGGFN NTW ++M+GN+ + PT + I++VG L GWR + +DP Sbjct 277 GGMNKSVIGAHTGGFNENTWAISMLGNYQEEEPTDVMIKSVGELAGWRAKVAGIDPLGKG 336 Query 338 DLQSAGSSYTTFPGGAIARLPAIFTHRDVGNTDCPGNAAYAVMDEIRDIA-AHFN 391 S G+ +T +P G LP IF HRDVGNT+CPG+ AYA MD+IR IA A F+ Sbjct 337 THTSEGTEFTFYPYGTKVELPNIFAHRDVGNTECPGDYAYAKMDQIRQIAKAKFD 391 Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust. Identities = 34/127 (27%), Positives = 54/127 (43%), Gaps = 17/127 (13%) Query 396 ELIKALEGGAIYQRWQALGGMNS-------------ALGAPTSPEADAADG----ARYAT 438 ++I L+ G I Q L ++S +LG + E +G Y Sbjct 491 KIINGLDLGKIISLAQKLAPLSSNNQIFRTANTNYPSLGEARTKEVTYTNGYDQEVTYTF 550 Query 439 FAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAEIQEPLQITQNFQHGTLNF 498 F G + +P T + G I + WA+Q ++ GPLGLP S E + +F+ G + Sbjct 551 FENGIVVGTPTTGTHALWGPIGDTWAAQGFDMGPLGLPVSEEEANGELVRVDFEGGYATY 610 Query 499 ERLTGNV 505 + TG V Sbjct 611 DSATGKV 617 >gi|38234748|ref|NP_940515.1| hypothetical protein DIP2207 [Corynebacterium diphtheriae NCTC 13129] gi|38201012|emb|CAE50735.1| Conserved putative secreted protein [Corynebacterium diphtheriae] Length=606 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 156/358 (44%), Positives = 197/358 (56%), Gaps = 56/358 (15%) Query 43 TVRELTQDTPFSLVALT----GDLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDG 98 TV+E ++ PFS ALT D+A A VR +RPDG W W ++TEP D Sbjct 81 TVKEFHREQPFSQFALTWNGERDIA---AFVRGQRPDGTWTEW----FDTEPLD------ 127 Query 99 SVELGGLNPG-PRSTDPVFVGTTTTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPA 157 G NP + TD +++ TTTVQV+++ D+L Sbjct 128 ---YGSDNPNHKKGTDLIYIEPTTTVQVSISGV---------------DVLG-------- 161 Query 158 TKEQPFGQNISAILISPPQAPPGTQWTPPTAVTMAGQP---PAIISRAEWGADESLRCET 214 P N+ A+ I GT P + + P +ISRA WGADESLRC Sbjct 162 ----PDAANLDAVFID-----GGTSDLPENGINLTADSDGMPRVISRAGWGADESLRCSR 212 Query 215 PEYDRGVRAAVVHHTAGSNDYSPLESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFE 274 PEY+ A V+HHTAGSN+YS ES GI++ IY YH++TLGWCDI Y+AL DKYG +FE Sbjct 213 PEYEDSTAAIVIHHTAGSNNYSQKESPGIMRGIYKYHAQTLGWCDIGYHALADKYGNLFE 272 Query 275 GSAGGLTKPVEGFHTGGFNRNTWGVAMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPR 334 G GGL K + G H GGFN NTW ++M+GN+D V P I++VG L GWR + +DP+ Sbjct 273 GRYGGLNKSIVGAHAGGFNSNTWAISMMGNYDVVQPPQAMIKSVGELAGWRAKVAGIDPK 332 Query 335 SMVDLQSAGSSYTTFPGGAIARLPAIFTHRDVGNTDCPGNAAYAVMDEIRDIAAHFND 392 S GSSYT +P G LP IF HRDVGNT CPG YA MD IR+IA D Sbjct 333 GSDTHYSEGSSYTFYPYGQAVLLPNIFAHRDVGNTACPGRYGYAQMDNIRNIAKQKYD 390 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/115 (34%), Positives = 54/115 (47%), Gaps = 5/115 (4%) Query 396 ELIKALEGGAIYQRWQALGGM-NSALGAPTSPEADAADGA----RYATFAKGAMYWSPVT 450 ++++ L I + W+ + +ALG SP A A YA F G + +P T Sbjct 487 KIVELLGNNDISRVWRDVNSFAGAALGNARSPIAHYASATGTPIDYALFDNGIVISNPET 546 Query 451 DAQPITGAIYEAWASQSYERGPLGLPTSAEIQEPLQITQNFQHGTLNFERLTGNV 505 + G I + WA Q +E GPLGLPTS+ + NFQHG + F T V Sbjct 547 GTNALWGTIGDLWAQQGFEAGPLGLPTSSVFEVDGLQRVNFQHGYITFNPTTSAV 601 >gi|225022360|ref|ZP_03711552.1| hypothetical protein CORMATOL_02399 [Corynebacterium matruchotii ATCC 33806] gi|224944873|gb|EEG26082.1| hypothetical protein CORMATOL_02399 [Corynebacterium matruchotii ATCC 33806] Length=684 Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 149/355 (42%), Positives = 202/355 (57%), Gaps = 50/355 (14%) Query 43 TVRELTQDTPFSLVALTGD-LAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVE 101 TV+E +D FS LT D +A VR +R DG W PW+ T DP ++ Sbjct 62 TVKEFKRDEAFSQFGLTWDGKKDIAAFVRGQRADGTWTPWFDT-------DP------LD 108 Query 102 LGGLNPGPRS-TDPVFVGTTTTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATKE 160 G P R TD +++ T TVQV++ AG DLL + Sbjct 109 YGSSKPFERKGTDLIYIEPTNTVQVSI------------AGV---DLL-----------K 142 Query 161 QPFGQNISAILISPPQAPPGTQWTPPTAVTMAGQP---PAIISRAEWGADESLRCETPEY 217 ++++A+ I ++ P + + +A P +ISRAEWGADESLRCE PEY Sbjct 143 DKTAKDLNAVFIDGGKSTP-----TDSGIKLAADSDGLPKVISRAEWGADESLRCEEPEY 197 Query 218 DRGVRAAVVHHTAGSNDYSPLESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSA 277 A V+HHTAGSN+YS E+AGIV+ IY YH++ LGWCDI Y++L DK+G ++EG Sbjct 198 TDHTSAIVIHHTAGSNNYSEDEAAGIVRGIYKYHAQQLGWCDIGYHSLADKFGNLYEGHY 257 Query 278 GGLTKPVEGFHTGGFNRNTWGVAMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMV 337 GG+ K V G H GGFN NTW ++M+GN+ + PT + I++VG L GWR + +DP Sbjct 258 GGMNKSVIGAHAGGFNENTWAISMLGNYQEEEPTDVMIKSVGELAGWRAKVAGIDPLGKG 317 Query 338 DLQSAGSSYTTFPGGAIARLPAIFTHRDVGNTDCPGNAAYAVMDEIRDIA-AHFN 391 S G+ +T +P G LP IF HRDVGNT+CPG+ AYA MD+IR IA A F+ Sbjct 318 THTSEGTEFTFYPYGTKVELPNIFAHRDVGNTECPGDYAYAKMDQIRQIAKAKFD 372 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 34/127 (27%), Positives = 54/127 (43%), Gaps = 17/127 (13%) Query 396 ELIKALEGGAIYQRWQALGGMNS-------------ALGAPTSPEADAADG----ARYAT 438 ++I L+ G I Q L ++S +LG + E +G Y Sbjct 472 KIINGLDLGKIISLAQKLAPLSSNNQIFRTANTNYPSLGEARTKEVTYTNGYDQEVTYTF 531 Query 439 FAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAEIQEPLQITQNFQHGTLNF 498 F G + +P T + G I + WA+Q ++ GPLGLP S E + +F+ G + Sbjct 532 FENGIVVGTPTTGTHALWGPIGDTWAAQGFDMGPLGLPVSEEEANGELVRVDFEGGYATY 591 Query 499 ERLTGNV 505 + TG V Sbjct 592 DSATGKV 598 >gi|333917776|ref|YP_004491357.1| Csp protein [Amycolicicoccus subflavus DQS3-9A1] gi|333479997|gb|AEF38557.1| Csp protein [Amycolicicoccus subflavus DQS3-9A1] Length=667 Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 154/401 (39%), Positives = 217/401 (55%), Gaps = 66/401 (16%) Query 44 VRELTQDTPFSLVALTGDLAGT-SARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGSVEL 102 VRE++QDTPF++ LT + G A VRA+ D W W +E EP D S + Sbjct 82 VREISQDTPFNMFGLTWEGEGDPEAWVRAQLEDETWTDW----FEVEP-----IDASSYV 132 Query 103 GGLNPGPRSTDPVFVGTTTTVQVAV----------------------------------- 127 + G +++ VFVG T VQ+++ Sbjct 133 NEIEEGRTASEVVFVGDTNRVQISIGGKVNPVLSGDTEPSEPIAPEDAAPNDGAAADEAP 192 Query 128 -TRPIDAPITQPPAGRP-----------PNDLLDSGLGYRPATKEQPFGQNISAILISPP 175 P +AP + PA P P D+ + PA + +N++AIL+ P Sbjct 193 EGAPAEAPADEVPAEAPTDEAPEEAPGEPGDISRPLIAQPPAPERSGTAENLTAILVRPS 252 Query 176 QAP----PGTQWTPPTAVTMAGQP--PAIISRAEWGADESLRCETPEYDRGVRAAVVHHT 229 +AP P P V +AG P P +ISRA+WGA+E +RC P + G+ A VVHHT Sbjct 253 RAPIADAPSDVSDP---VDIAGVPTKPTVISRAQWGANEGIRCNQPRVNGGLGAVVVHHT 309 Query 230 AGSNDYSPLESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHT 289 AG+N+Y+ +SA IV+ IY YH++TLGWCD+ Y+ALVDKYG++FEG GG+ + ++G HT Sbjct 310 AGNNNYTQEQSAQIVRGIYAYHAQTLGWCDVGYHALVDKYGRIFEGRFGGMERDLQGAHT 369 Query 290 GGFNRNTWGVAMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTF 349 GGFN NT G +MIG++ +V P Q+ +G+L GWRL ++++ S G+S+T Sbjct 370 GGFNVNTAGYSMIGHYSNVTPPRAQVEAIGKLAGWRLALENLSATGNSLHYSEGTSFTWI 429 Query 350 PGGAIARLPAIFTHRDVGNTDCPGNAAYAVMDEIRDIAAHF 390 P G RLP IF HRDVG T+CPGN Y M IR+IAA + Sbjct 430 PQGQSVRLPNIFAHRDVGYTECPGNLGYQQMATIRNIAAEY 470 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/103 (41%), Positives = 54/103 (53%), Gaps = 0/103 (0%) Query 403 GGAIYQRWQALGGMNSALGAPTSPEADAADGARYATFAKGAMYWSPVTDAQPITGAIYEA 462 G I +RW LGG LG +DA+ R A F G +YWS T A+ + GAI E Sbjct 552 GEEIARRWYTLGGAEGLLGTVVEGISDASGDVRNAKFENGTIYWSEETGARAVWGAIGEK 611 Query 463 WASQSYERGPLGLPTSAEIQEPLQITQNFQHGTLNFERLTGNV 505 WA+ E+ LGLP + E P + NFQ+G L F+ TG V Sbjct 612 WAALGAEQSDLGLPITEEFTVPEGVRTNFQNGYLVFDGTTGTV 654 >gi|227489135|ref|ZP_03919451.1| N-acetylmuramoyl-L-alanine amidase domain protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227090935|gb|EEI26247.1| N-acetylmuramoyl-L-alanine amidase domain protein [Corynebacterium glucuronolyticum ATCC 51867] Length=608 Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 157/379 (42%), Positives = 202/379 (54%), Gaps = 50/379 (13%) Query 16 PASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALT--GDLAGTSARVRAKR 73 P ++ + P+ +A Q G G TV+E D FS+ ALT GD R++R Sbjct 54 PLAAGQSVTVPDAAIAAQ---GEAGDKTVKEFHSDKEFSMFALTWQGDHT-FGVFFRSQR 109 Query 74 PDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTTTTVQVAVTRPIDA 133 PDG W W+ + +P D V GLN T+P++V T VQV++ + Sbjct 110 PDGSWSEWF----DADPLD-------VPTTGLN----GTEPIYVEPTRAVQVSMN---NV 151 Query 134 PITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPGTQWTPPTAVTMAG 193 P D ++ T E F I + G Q T A G Sbjct 152 DFNNP-------DTMN--------TMEVHF--------IDGGEGLTGDQSTIDLAAAQTG 188 Query 194 QPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLESAGIVKAIYTYHSK 253 P +ISR+ WGA + C YD V A +HHTAGSN+Y+P ++AGIV+ I+ YH+ Sbjct 189 -IPKVISRSGWGAGDK-GCNVT-YDDKVSAITIHHTAGSNNYTPGQAAGIVRGIWNYHAN 245 Query 254 TLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVAMIGNFDDVAPTPI 313 TLGWCDI YNALVDKYG ++EG GG TK V+G H GGFN+NTWG++M+GN+ V PT Sbjct 246 TLGWCDIGYNALVDKYGNIYEGRKGGFTKAVQGAHAGGFNQNTWGISMMGNYTTVNPTQD 305 Query 314 QIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAIFTHRDVGNTDCPG 373 I VG+L GWR + DP S G+SYT +P G RLP IF HRDVGNT CPG Sbjct 306 TIDAVGQLAGWRAAVAGFDPTGYSTHTSEGTSYTKYPMGQSVRLPNIFAHRDVGNTTCPG 365 Query 374 NAAYAVMDEIRDIAAHFND 392 +A YA MDEIR IA D Sbjct 366 DAGYARMDEIRRIAKRNYD 384 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 50/197 (26%), Positives = 83/197 (43%), Gaps = 38/197 (19%) Query 307 DVAPTPIQIRTVGRLLGW---RLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAIFTH 363 D + I I VG +L L +D+ P+ + +L SS PG + +PA+ Sbjct 435 DTSKAIIAIGAVGTILALVITFLAKNDMLPQELKNL----SSKQLLPGLTLKDIPAL--- 487 Query 364 RDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSALGAP 423 D++ ++++ N I+ L M LGA Sbjct 488 ----------------GDKVANLSSGSNPERANAIRNLSSV-----------MGKVLGAA 520 Query 424 TSPEADAA-DGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAEIQ 482 T A AA + TF G + +P T Q + G I +AWA+Q ++ G LGLP + E Sbjct 521 TGVVAYAAGTDTAFQTFQNGIILDNPRTGTQALWGKIGDAWAAQGFDAGALGLPVNQEHP 580 Query 483 EPLQITQNFQHGTLNFE 499 + I +F+HG++ ++ Sbjct 581 DGNLIRVDFEHGSITYD 597 >gi|227540698|ref|ZP_03970747.1| N-acetylmuramoyl-L-alanine amidase domain protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227183510|gb|EEI64482.1| N-acetylmuramoyl-L-alanine amidase domain protein [Corynebacterium glucuronolyticum ATCC 51866] Length=595 Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 157/379 (42%), Positives = 202/379 (54%), Gaps = 50/379 (13%) Query 16 PASSHEPSPTPNTQLAEQPLIGLGGGVTVRELTQDTPFSLVALT--GDLAGTSARVRAKR 73 P ++ + P+ +A Q G G TV+E D FS+ ALT GD R++R Sbjct 41 PLAAGQSVTVPDAAIAAQ---GEAGDKTVKEFHSDKEFSMFALTWQGDHT-FGVFFRSQR 96 Query 74 PDGDWGPWYQTEYETEPRDPAGTDGSVELGGLNPGPRSTDPVFVGTTTTVQVAVTRPIDA 133 PDG W W+ + +P D V GLN T+P++V T VQV++ + Sbjct 97 PDGSWSEWF----DADPLD-------VPTTGLN----GTEPIYVEPTHAVQVSMN---NV 138 Query 134 PITQPPAGRPPNDLLDSGLGYRPATKEQPFGQNISAILISPPQAPPGTQWTPPTAVTMAG 193 P D ++ T E F I + G Q T A G Sbjct 139 DFNNP-------DTMN--------TMEVHF--------IDGGEGLTGDQSTIDLAAAQTG 175 Query 194 QPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLESAGIVKAIYTYHSK 253 P +ISR+ WGA + C YD V A +HHTAGSN+Y+P ++AGIV+ I+ YH+ Sbjct 176 IPK-VISRSGWGAGDK-GCNVT-YDDKVSAITIHHTAGSNNYTPGQAAGIVRGIWNYHAN 232 Query 254 TLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVAMIGNFDDVAPTPI 313 TLGWCDI YNALVDKYG ++EG GG TK V+G H GGFN+NTWG++M+GN+ V PT Sbjct 233 TLGWCDIGYNALVDKYGNIYEGRKGGFTKAVQGAHAGGFNQNTWGISMMGNYTTVNPTQD 292 Query 314 QIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAIFTHRDVGNTDCPG 373 I VG+L GWR + DP S G+SYT +P G RLP IF HRDVGNT CPG Sbjct 293 TIDAVGQLAGWRAAVAGFDPTGYSTHTSEGTSYTKYPMGQSVRLPNIFAHRDVGNTTCPG 352 Query 374 NAAYAVMDEIRDIAAHFND 392 +A YA MDEIR IA D Sbjct 353 DAGYARMDEIRRIAKRNYD 371 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 50/197 (26%), Positives = 83/197 (43%), Gaps = 38/197 (19%) Query 307 DVAPTPIQIRTVGRLLGW---RLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAIFTH 363 D + I I VG +L L +D+ P+ + +L SS PG + +PA+ Sbjct 422 DTSKAIIAIGAVGTILALVITFLAKNDMLPQELKNL----SSKQLLPGLTLKDIPAL--- 474 Query 364 RDVGNTDCPGNAAYAVMDEIRDIAAHFNDPPEELIKALEGGAIYQRWQALGGMNSALGAP 423 D++ ++++ N I+ L M LGA Sbjct 475 ----------------GDKVANLSSGSNPERANAIRNLSSV-----------MGKVLGAA 507 Query 424 TSPEADAA-DGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGLPTSAEIQ 482 T A AA + TF G + +P T Q + G I +AWA+Q ++ G LGLP + E Sbjct 508 TGVVAYAAGTDTAFQTFQNGIILDNPRTGTQALWGKIGDAWAAQGFDAGALGLPVNQEHP 567 Query 483 EPLQITQNFQHGTLNFE 499 + I +F+HG++ ++ Sbjct 568 DGNLIRVDFEHGSITYD 584 >gi|340539677|gb|ADL11416.2| Peptidoglycan recognition protein [Corynebacterium pseudotuberculosis C231] Length=675 Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 154/391 (40%), Positives = 203/391 (52%), Gaps = 57/391 (14%) Query 37 GLGGGVTVRELTQDTPFSLVALT----GDLAGTSARVRAKRPDGDWGPWYQTEYETEPRD 92 G G TV++ +D PFS A+T D+A A VRA+R DG W WY +TEP D Sbjct 74 GKMGSRTVKQFHRDQPFSQFAITWNGEKDIA---AFVRAQRADGTWSEWY----DTEPLD 126 Query 93 PAGTDGSVELGGLNPGPRSTDPVFVGTTTTVQVAVTRPID----APIT--------QPPA 140 G + R TD +++ T T+QV+++ +D AP T QP A Sbjct 127 ---------YGAGDTEKRGTDVIYIEPTNTIQVSMSG-VDITGGAPATPPNAEAAPQPAA 176 Query 141 GRPPNDLLDSGLGYRPATKEQP-----FG--------------QNISAILISPPQAPPGT 181 G+P D + PA FG N+S + + G Sbjct 177 GQPAADASPAAPAEDPAVHGMAPLPSNFGDIKPVAEATNITATNNVSDFDVVFIEG--GE 234 Query 182 QWTPPTAVTMAGQP---PAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPL 238 P + M P +ISR WGA+ES+RC+ P Y GV+ +HHTAGSN+YS Sbjct 235 SQLPENGIQMTADSDGMPRVISRKGWGANESIRCQQPSYFDGVKGITIHHTAGSNNYSEA 294 Query 239 ESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWG 298 ++ GIV+ IY YH++TLGWCD+ Y +L DKYG ++EG GGL + V G H GGFN NTW Sbjct 295 QAPGIVRGIYQYHAQTLGWCDVGYQSLADKYGNLYEGRYGGLNRNVWGAHAGGFNENTWA 354 Query 299 VAMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLP 358 ++M+GN+D TP I++VG L GWR + +DP S G+SYT +P G LP Sbjct 355 ISMLGNYDTAPTTPAMIKSVGELAGWRSAVAGIDPTGSGTHYSEGTSYTPYPKGQAVNLP 414 Query 359 AIFTHRDVGNTDCPGNAAYAVMDEIRDIAAH 389 IF HRDVGNT CPG AYA M IR A Sbjct 415 NIFAHRDVGNTACPGKHAYAQMGNIRTTAKQ 445 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 34/90 (38%), Positives = 47/90 (53%), Gaps = 4/90 (4%) Query 420 LGAPTSPEADAA----DGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGL 475 LG P S A A + YA F G + +P T A + GAI +AWA Q ++ GPLGL Sbjct 581 LGNPRSGVATYASKTGEEVEYALFDHGIIVSTPSTGANALWGAIGDAWAQQGFDAGPLGL 640 Query 476 PTSAEIQEPLQITQNFQHGTLNFERLTGNV 505 PT + + + +FQHG + F TG + Sbjct 641 PTGTQYRSGEEYRVDFQHGYITFNPATGAI 670 >gi|300859392|ref|YP_003784375.1| hypothetical protein cpfrc_01975 [Corynebacterium pseudotuberculosis FRC41] gi|300686846|gb|ADK29768.1| putative secreted protein [Corynebacterium pseudotuberculosis FRC41] Length=675 Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 153/388 (40%), Positives = 202/388 (53%), Gaps = 57/388 (14%) Query 40 GGVTVRELTQDTPFSLVALT----GDLAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAG 95 G TV++ +D PFS A+T D+A A VRA+R DG W WY +TEP D Sbjct 77 GSRTVKQFHRDQPFSQFAITWNGEKDIA---AFVRAQRADGTWSEWY----DTEPLD--- 126 Query 96 TDGSVELGGLNPGPRSTDPVFVGTTTTVQVAVTRPID----APIT--------QPPAGRP 143 G + R TD +++ T T+QV+++ +D AP T QP AG+P Sbjct 127 ------YGAGDTEKRGTDVIYIEPTNTIQVSMSG-VDITGGAPATPPNAEAAPQPAAGQP 179 Query 144 PNDLLDSGLGYRPATKEQP-----FG--------------QNISAILISPPQAPPGTQWT 184 D + PA FG N+S + + G Sbjct 180 AADASPAAPAEDPAVHGMAPLPSNFGDIKPVAEATNITATNNVSDFDVVFIEG--GESQL 237 Query 185 PPTAVTMAGQP---PAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLESA 241 P + M P +ISR WGA+ES+RC+ P Y GV+ +HHTAGSN+YS ++ Sbjct 238 PENGIQMTADSDGMPRVISRKGWGANESIRCQQPSYFDGVKGITIHHTAGSNNYSKAQAP 297 Query 242 GIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVAM 301 GIV+ IY YH++TLGWCD+ Y +L DKYG ++EG GGL + V G H GGFN NTW ++M Sbjct 298 GIVRGIYQYHAQTLGWCDVGYQSLADKYGNLYEGRYGGLNRNVWGAHAGGFNENTWAISM 357 Query 302 IGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAIF 361 +GN+D TP I++VG L GWR + +DP S G+SYT +P G LP IF Sbjct 358 LGNYDTAPTTPAMIKSVGELAGWRSAVAGIDPTGSGTHYSEGTSYTPYPKGQAVNLPNIF 417 Query 362 THRDVGNTDCPGNAAYAVMDEIRDIAAH 389 HRDVGNT CPG AYA M IR A Sbjct 418 AHRDVGNTACPGKHAYAQMGNIRTTAKQ 445 Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 34/90 (38%), Positives = 47/90 (53%), Gaps = 4/90 (4%) Query 420 LGAPTSPEADAA----DGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGL 475 LG P S A A + YA F G + +P T A + GAI +AWA Q ++ GPLGL Sbjct 581 LGNPRSGVATYASKTGEEVEYALFDHGIIVSTPSTGANALWGAIGDAWAQQGFDAGPLGL 640 Query 476 PTSAEIQEPLQITQNFQHGTLNFERLTGNV 505 PT + + + +FQHG + F TG + Sbjct 641 PTGTQYRSGEEYRVDFQHGYITFNPATGAI 670 >gi|308277327|gb|ADO27226.1| Putative peptidoglycan recognition protein [Corynebacterium pseudotuberculosis I19] gi|341825765|gb|AEK93286.1| Peptidoglycan recognition protein [Corynebacterium pseudotuberculosis PAT10] Length=738 Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 152/388 (40%), Positives = 202/388 (53%), Gaps = 51/388 (13%) Query 37 GLGGGVTVRELTQDTPFSLVALTGD-LAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAG 95 G G TV++ +D PFS A+T + +A VRA+R DG W WY +TEP D Sbjct 137 GKMGSRTVKQFHRDQPFSQFAITWNGEKDIAAFVRAQRADGTWSEWY----DTEPLD--- 189 Query 96 TDGSVELGGLNPGPRSTDPVFVGTTTTVQVAVTRPID----APIT--------QPPAGRP 143 G + R TD +++ T T+QV+++ +D AP T QP AG+P Sbjct 190 ------YGAGDTEKRGTDVIYIEPTNTIQVSMSG-VDITGGAPATPPNAEAAPQPAAGQP 242 Query 144 PNDLLDSGLGYRPATKEQP-----FG--------------QNISAILISPPQAPPGTQWT 184 D + PA FG N+S + + G Sbjct 243 AADASPAAPAEDPAVHGMAPLPSNFGDIKPVAEATNITATNNVSDFDVVFIEG--GESQL 300 Query 185 PPTAVTMAGQP---PAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLESA 241 P + M P +ISR WGA+ES+RC+ P Y GV+ +HHTAGSN+YS ++ Sbjct 301 PENGIQMTADSDGMPRVISRKGWGANESIRCQQPSYFDGVKGITIHHTAGSNNYSEAQAP 360 Query 242 GIVKAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVAM 301 GIV+ IY YH++TLGWCD+ Y +L DKYG ++EG GGL + V G H GGFN NTW ++M Sbjct 361 GIVRGIYQYHAQTLGWCDVGYQSLADKYGNLYEGRYGGLNRNVWGAHAGGFNENTWAISM 420 Query 302 IGNFDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAIF 361 +GN+D TP I++VG L GWR + +DP S G+SYT +P G LP IF Sbjct 421 LGNYDTAPTTPAMIKSVGELAGWRSAVAGIDPTGSGTHYSEGTSYTPYPKGQAVNLPNIF 480 Query 362 THRDVGNTDCPGNAAYAVMDEIRDIAAH 389 HRDVGNT CPG AYA M IR A Sbjct 481 AHRDVGNTACPGKHAYAQMGNIRTTAKQ 508 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 34/90 (38%), Positives = 47/90 (53%), Gaps = 4/90 (4%) Query 420 LGAPTSPEADAA----DGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGL 475 LG P S A A + YA F G + +P T A + GAI +AWA Q ++ GPLGL Sbjct 644 LGNPRSGVATYASKTGEEVEYALFDHGIIVSTPSTGANALWGAIGDAWAQQGFDAGPLGL 703 Query 476 PTSAEIQEPLQITQNFQHGTLNFERLTGNV 505 PT + + + +FQHG + F TG + Sbjct 704 PTGTQYRSGEEYRVDFQHGYITFNPATGAI 733 >gi|340539388|gb|ADL21828.2| Peptidoglycan recognition protein [Corynebacterium pseudotuberculosis 1002] Length=675 Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 151/385 (40%), Positives = 201/385 (53%), Gaps = 51/385 (13%) Query 40 GGVTVRELTQDTPFSLVALTGD-LAGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDG 98 G TV++ +D PFS A+T + +A VRA+R DG W WY +TEP D Sbjct 77 GSRTVKQFHRDQPFSQFAITWNGEKDIAAFVRAQRADGTWSEWY----DTEPLD------ 126 Query 99 SVELGGLNPGPRSTDPVFVGTTTTVQVAVTRPID----APIT--------QPPAGRPPND 146 G + R TD +++ T T+QV+++ +D AP T QP AG+P D Sbjct 127 ---YGAGDTEKRGTDVIYIEPTNTIQVSMSG-VDITGGAPATPPNAEAAPQPAAGQPAAD 182 Query 147 LLDSGLGYRPATKEQP-----FG--------------QNISAILISPPQAPPGTQWTPPT 187 + PA FG N+S + + G P Sbjct 183 ASPAAPAEDPAVHGMAPLPSNFGDIKPVAEATNITATNNVSDFDVVFIEG--GESQLPEN 240 Query 188 AVTMAGQP---PAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLESAGIV 244 + M P +ISR WGA+ES+RC+ P Y GV+ +HHTAGSN+YS ++ GIV Sbjct 241 GIQMTADSDGMPRVISRKGWGANESIRCQQPSYFDGVKGITIHHTAGSNNYSEAQAPGIV 300 Query 245 KAIYTYHSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVAMIGN 304 + IY YH++TLGWCD+ Y +L DKYG ++EG GGL + V G H GGFN NTW ++M+GN Sbjct 301 RGIYQYHAQTLGWCDVGYQSLADKYGNLYEGRYGGLNRNVWGAHAGGFNENTWAISMLGN 360 Query 305 FDDVAPTPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAIFTHR 364 +D TP I++VG L GWR + +DP S G+SYT +P G LP IF HR Sbjct 361 YDTAPTTPAMIKSVGELAGWRSAVAGIDPTGSGTHYSEGTSYTPYPKGQAVNLPNIFAHR 420 Query 365 DVGNTDCPGNAAYAVMDEIRDIAAH 389 DVGNT CPG AYA M IR A Sbjct 421 DVGNTACPGKHAYAQMGNIRTTAKQ 445 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 34/90 (38%), Positives = 47/90 (53%), Gaps = 4/90 (4%) Query 420 LGAPTSPEADAA----DGARYATFAKGAMYWSPVTDAQPITGAIYEAWASQSYERGPLGL 475 LG P S A A + YA F G + +P T A + GAI +AWA Q ++ GPLGL Sbjct 581 LGNPRSGVATYASKTGEEVEYALFDHGIIVSTPSTGANALWGAIGDAWAQQGFDAGPLGL 640 Query 476 PTSAEIQEPLQITQNFQHGTLNFERLTGNV 505 PT + + + +FQHG + F TG + Sbjct 641 PTGTQYRSGEEYRVDFQHGYITFNPATGAI 670 >gi|262200228|ref|YP_003271436.1| N-acetylmuramoyl-L-alanine amidase family 2 [Gordonia bronchialis DSM 43247] gi|262083575|gb|ACY19543.1| N-acetylmuramoyl-L-alanine amidase family 2 [Gordonia bronchialis DSM 43247] Length=502 Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 144/355 (41%), Positives = 192/355 (55%), Gaps = 30/355 (8%) Query 41 GVTVRELTQDTPFSLVALTGDL-AGTSARVRAKRPDGDWGPWYQTEYETEPRDPAGTDGS 99 G V L +D P ++A T D VRAKR DG W PW E T+ A T G Sbjct 152 GAAVTTLVRDAPIKMLAFTWDRPVDVDMMVRAKRSDGRWAPWTALEPATD--SAAATPGR 209 Query 100 VELGGLNPGPRSTDPVFVGTTTTVQVAVTRPIDAPITQPPAGRPPNDLLDSGLGYRPATK 159 P T+P++VG VQ+A T D + P A + DSGL P Sbjct 210 ---------PAGTEPIWVGDAREVQIAAT---DDGLAIPAA-----EAQDSGL---PQLA 249 Query 160 EQPFGQNISAILISPPQAPPGTQWTPPTAVTMAGQP-------PAIISRAEWGADESLRC 212 + I ++ + A T +P + +++ P +++RA+WGADE++RC Sbjct 250 VGTASEIIGTLVTTALSAVKATLISPESILSLGSSLLTPLLGGPQVVARAQWGADEAIRC 309 Query 213 ETPEYDRGVRAAVVHHTAGSNDYSPLESAGIVKAIYTYHSKTLGWCDIAYNALVDKYGQV 272 P Y +R A++HHTAGSN+Y+ +S IV+ IY YH++TL WCDI YN LVDKYGQ+ Sbjct 310 SQPAYSPALRGAIIHHTAGSNEYTAAQSVEIVRGIYAYHARTLNWCDIGYNVLVDKYGQI 369 Query 273 FEGSAGGLTKPVEGFHTGGFNRNTWGVAMIGNFDDVAPTPIQIRTVGRLLGWRLGMDDVD 332 FEG+ GGL + VEG HTGGFNR+T GV+MIGN D APT + +V R L WRLG ++ Sbjct 370 FEGAFGGLDRNVEGTHTGGFNRSTVGVSMIGNLDVAAPTGAMVASVARFLRWRLGKAGLN 429 Query 333 PRSMVDLQSAGSSYTTFPGGAIARLPAIFTHRDVGNTDCPGNAAYAVMDEIRDIA 387 P L + S + FP GA LP I HRD NT CPG Y + +IR +A Sbjct 430 PGGTATLTAEAFSDSKFPAGAQTTLPMIAGHRDYNNTSCPGVQGYPALAQIRALA 484 >gi|319950521|ref|ZP_08024432.1| hypothetical protein ES5_13103 [Dietzia cinnamea P4] gi|319435805|gb|EFV91014.1| hypothetical protein ES5_13103 [Dietzia cinnamea P4] Length=503 Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 113/200 (57%), Positives = 143/200 (72%), Gaps = 0/200 (0%) Query 191 MAGQPPAIISRAEWGADESLRCETPEYDRGVRAAVVHHTAGSNDYSPLESAGIVKAIYTY 250 +A + P+II+RA WGADES+RC YD + AAVVHHTAGSN+Y+ SAG+++ IYTY Sbjct 75 IAARQPSIITRAGWGADESIRCGGTSYDPTLAAAVVHHTAGSNNYTREGSAGVMRGIYTY 134 Query 251 HSKTLGWCDIAYNALVDKYGQVFEGSAGGLTKPVEGFHTGGFNRNTWGVAMIGNFDDVAP 310 H++TLGWCD+ YN LVDKYGQ FEG GGL + V+G H GGFN NTWG++M+G++ V+P Sbjct 135 HARTLGWCDVGYNVLVDKYGQAFEGRRGGLDRNVQGAHAGGFNGNTWGISMMGDYSTVSP 194 Query 311 TPIQIRTVGRLLGWRLGMDDVDPRSMVDLQSAGSSYTTFPGGAIARLPAIFTHRDVGNTD 370 IR VG ++GWRL + VDP+ S G+SYT + G RLP IF HRDVG T Sbjct 195 PDATIRKVGEIIGWRLSVAGVDPKGSDTHYSEGTSYTKYSYGTAVRLPNIFAHRDVGLTT 254 Query 371 CPGNAAYAVMDEIRDIAAHF 390 CPG A YA M +IRDIAA + Sbjct 255 CPGEAGYAKMGQIRDIAASY 274 Lambda K H 0.315 0.134 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1186561841532 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40