BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv3818 Length=516 Score E Sequences producing significant alignments: (Bits) Value gi|15610954|ref|NP_218335.1| hypothetical protein Rv3818 [Mycoba... 1066 0.0 gi|298527293|ref|ZP_07014702.1| conserved hypothetical protein [... 1064 0.0 gi|289755951|ref|ZP_06515329.1| conserved hypothetical protein [... 1063 0.0 gi|340628787|ref|YP_004747239.1| hypothetical protein MCAN_38371... 1057 0.0 gi|183985349|ref|YP_001853640.1| hypothetical protein MMAR_5381 ... 976 0.0 gi|342860075|ref|ZP_08716727.1| Rieske 2Fe-2S family protein [My... 971 0.0 gi|118620017|ref|YP_908349.1| hypothetical protein MUL_5001 [Myc... 967 0.0 gi|240172627|ref|ZP_04751286.1| hypothetical protein MkanA1_2515... 962 0.0 gi|254822666|ref|ZP_05227667.1| Rieske 2Fe-2S family protein [My... 955 0.0 gi|296166950|ref|ZP_06849366.1| Rieske 2Fe-2S family protein [My... 953 0.0 gi|118464045|ref|YP_879494.1| Rieske 2Fe-2S family protein [Myco... 942 0.0 gi|254773259|ref|ZP_05214775.1| Rieske 2Fe-2S family protein [My... 941 0.0 gi|41406302|ref|NP_959138.1| hypothetical protein MAP0204c [Myco... 939 0.0 gi|315446520|ref|YP_004079399.1| Zn-dependent hydrolase of beta-... 913 0.0 gi|145221744|ref|YP_001132422.1| Rieske (2Fe-2S) domain-containi... 913 0.0 gi|126437970|ref|YP_001073661.1| Rieske (2Fe-2S) domain-containi... 909 0.0 gi|108801989|ref|YP_642186.1| Rieske (2Fe-2S) domain-containing ... 909 0.0 gi|120406599|ref|YP_956428.1| Rieske (2Fe-2S) domain-containing ... 905 0.0 gi|169627261|ref|YP_001700910.1| Rieske family iron-sulfur clust... 892 0.0 gi|118474008|ref|YP_890623.1| Rieske 2Fe-2S family protein [Myco... 890 0.0 gi|333992774|ref|YP_004525388.1| hypothetical protein JDM601_413... 847 0.0 gi|54022111|ref|YP_116353.1| hypothetical protein nfa1470 [Nocar... 827 0.0 gi|111021028|ref|YP_704000.1| hypothetical protein RHA1_ro04045 ... 823 0.0 gi|226363333|ref|YP_002781115.1| hypothetical protein ROP_39230 ... 818 0.0 gi|325675625|ref|ZP_08155309.1| Rieske 2Fe-2S family protein [Rh... 816 0.0 gi|312140736|ref|YP_004008072.1| iron-sulfur binding oxidoreduct... 816 0.0 gi|226309188|ref|YP_002769148.1| hypothetical protein RER_57010 ... 801 0.0 gi|296137906|ref|YP_003645149.1| Rieske (2Fe-2S) iron-sulfur dom... 788 0.0 gi|343926257|ref|ZP_08765766.1| hypothetical protein GOALK_056_0... 771 0.0 gi|326384318|ref|ZP_08205999.1| Rieske (2Fe-2S) iron-sulfur doma... 768 0.0 gi|262200221|ref|YP_003271429.1| rieske (2Fe-2S) iron-sulfur dom... 750 0.0 gi|339300224|gb|AEJ52334.1| hypothetical protein CCDC5180_3497 [... 551 1e-154 gi|302865914|ref|YP_003834551.1| Rieske (2Fe-2S) iron-sulfur dom... 517 2e-144 gi|330466312|ref|YP_004404055.1| rieske (2fe-2S) iron-sulfur dom... 514 1e-143 gi|159036882|ref|YP_001536135.1| Rieske (2Fe-2S) domain-containi... 513 4e-143 gi|145593881|ref|YP_001158178.1| Rieske (2Fe-2S) domain-containi... 511 9e-143 gi|238063331|ref|ZP_04608040.1| Rieske domain-containing protein... 508 8e-142 gi|291299712|ref|YP_003510990.1| Rieske (2Fe-2S) domain-containi... 506 4e-141 gi|302547851|ref|ZP_07300193.1| Rieske 2Fe-2S family protein [St... 499 7e-139 gi|345012574|ref|YP_004814928.1| Rieske (2Fe-2S) iron-sulfur dom... 496 3e-138 gi|297162686|gb|ADI12398.1| 2Fe-2S cluster-containing protein [S... 493 3e-137 gi|269839855|ref|YP_003324548.1| Rieske (2Fe-2S) domain protein ... 491 1e-136 gi|339300223|gb|AEJ52333.1| hypothetical protein CCDC5180_3496 [... 479 4e-133 gi|256391380|ref|YP_003112944.1| Rieske (2Fe-2S) domain-containi... 447 2e-123 gi|289747660|ref|ZP_06507038.1| conserved hypothetical protein [... 446 5e-123 gi|323359980|ref|YP_004226376.1| Zn-dependent hydrolase of the b... 435 9e-120 gi|115378123|ref|ZP_01465299.1| rieske [2Fe-2S] domain protein [... 170 6e-40 gi|108759868|ref|YP_631675.1| Rieske family iron-sulfur cluster-... 167 4e-39 gi|338534666|ref|YP_004668000.1| Rieske family iron-sulfur clust... 164 3e-38 gi|256389348|ref|YP_003110912.1| Rieske (2Fe-2S) domain-containi... 106 1e-20 >gi|15610954|ref|NP_218335.1| hypothetical protein Rv3818 [Mycobacterium tuberculosis H37Rv] gi|15843442|ref|NP_338479.1| hypothetical protein MT3926 [Mycobacterium tuberculosis CDC1551] gi|31794992|ref|NP_857485.1| hypothetical protein Mb3848 [Mycobacterium bovis AF2122/97] 72 more sequence titles Length=516 Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust. Identities = 515/516 (99%), Positives = 516/516 (100%), Gaps = 0/516 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH Sbjct 1 MQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD Sbjct 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI Sbjct 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD Sbjct 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT Sbjct 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL Sbjct 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 Query 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW Sbjct 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 Query 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG Sbjct 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 Query 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSRP 516 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSRP Sbjct 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSRP 516 >gi|298527293|ref|ZP_07014702.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298497087|gb|EFI32381.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=516 Score = 1064 bits (2751), Expect = 0.0, Method: Compositional matrix adjust. Identities = 514/516 (99%), Positives = 515/516 (99%), Gaps = 0/516 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH Sbjct 1 MQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD Sbjct 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI Sbjct 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQV ATWVVPSAGPPCFLAPELRHLNDD Sbjct 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVRATWVVPSAGPPCFLAPELRHLNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT Sbjct 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL Sbjct 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 Query 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW Sbjct 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 Query 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG Sbjct 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 Query 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSRP 516 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSRP Sbjct 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSRP 516 >gi|289755951|ref|ZP_06515329.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289696538|gb|EFD63967.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] Length=516 Score = 1063 bits (2749), Expect = 0.0, Method: Compositional matrix adjust. Identities = 514/516 (99%), Positives = 515/516 (99%), Gaps = 0/516 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH Sbjct 1 MQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD Sbjct 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI Sbjct 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMP RAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD Sbjct 181 WYPMVYDMPPRAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT Sbjct 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL Sbjct 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 Query 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW Sbjct 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 Query 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG Sbjct 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 Query 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSRP 516 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSRP Sbjct 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSRP 516 >gi|340628787|ref|YP_004747239.1| hypothetical protein MCAN_38371 [Mycobacterium canettii CIPT 140010059] gi|340006977|emb|CCC46168.1| hypothetical protein MCAN_38371 [Mycobacterium canettii CIPT 140010059] Length=516 Score = 1057 bits (2734), Expect = 0.0, Method: Compositional matrix adjust. Identities = 511/516 (99%), Positives = 514/516 (99%), Gaps = 0/516 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH Sbjct 1 MQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFH FFETTDSVKHRLRGPNGDLD Sbjct 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHWFFETTDSVKHRLRGPNGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI Sbjct 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMPARAK+AFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD Sbjct 181 WYPMVYDMPARAKEAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT Sbjct 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 DKAAYIADYADRMAPVLAAQKAGWAAA GEPLL+PLRTLFEPIMLQSNEICDGIGYPVEL Sbjct 301 DKAAYIADYADRMAPVLAAQKAGWAAATGEPLLEPLRTLFEPIMLQSNEICDGIGYPVEL 360 Query 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW Sbjct 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 Query 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG Sbjct 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 Query 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSRP 516 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSRP Sbjct 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSRP 516 >gi|183985349|ref|YP_001853640.1| hypothetical protein MMAR_5381 [Mycobacterium marinum M] gi|183178675|gb|ACC43785.1| conserved hypothetical protein [Mycobacterium marinum M] Length=516 Score = 976 bits (2522), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/515 (90%), Positives = 488/515 (95%), Gaps = 0/515 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGFLIQTQ+GSILCDPWVNPAYFASWFPFPDNS LDW ALG+CDYLYVSHLH Sbjct 1 MQVTSVGHAGFLIQTQSGSILCDPWVNPAYFASWFPFPDNSALDWDALGDCDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFDAENLR+HVNKDAVVLLPDFPVPDLRNEL+KLGFHRFFETTDSVKHRL GP GDLD Sbjct 61 KDHFDAENLRSHVNKDAVVLLPDFPVPDLRNELEKLGFHRFFETTDSVKHRLSGPRGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 +MIIALRAPADGPIGDSALVV+DGETTAFNMNDARP++LD+LASEFGHIDVH+LQYSGAI Sbjct 121 IMIIALRAPADGPIGDSALVVSDGETTAFNMNDARPIELDMLASEFGHIDVHLLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMPARAK+AFG QKRQR MDRARQY+AQV ATWVVPSAGPPCFL PELR LNDD Sbjct 181 WYPMVYDMPARAKEAFGTQKRQRGMDRARQYVAQVDATWVVPSAGPPCFLDPELRELNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 SDPANIFPDQMVFLDQMR HG D GLLMIPGS ADFTG+TLNSL HPLP E VEAIFTT Sbjct 241 RSDPANIFPDQMVFLDQMRIHGHDRGLLMIPGSIADFTGSTLNSLSHPLPTEDVEAIFTT 300 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 K+AYIADYADRMAPV+AA++A WA A GEPLL+PLR LFEPIMLQSNEICDGIGYPVEL Sbjct 301 GKSAYIADYADRMAPVIAAERASWAPAEGEPLLEPLRALFEPIMLQSNEICDGIGYPVEL 360 Query 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 IG ET+VLDFPKRAVREPIP+E+FRYGFAIAPELVRTVLRD EPDWVNTIFLSTRF+AW Sbjct 361 VIGAETVVLDFPKRAVREPIPNEKFRYGFAIAPELVRTVLRDQEPDWVNTIFLSTRFQAW 420 Query 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 RVGGYNEYLYTFFKCLTDERIAYADGWFAE HDDS+SITL+GWEIQRRCPHLKADLSKFG Sbjct 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAETHDDSASITLDGWEIQRRCPHLKADLSKFG 480 Query 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 VVEG+TLTCNLHGWQWRL+DGRCLT RGHQLRSSR Sbjct 481 VVEGDTLTCNLHGWQWRLEDGRCLTTRGHQLRSSR 515 >gi|342860075|ref|ZP_08716727.1| Rieske 2Fe-2S family protein [Mycobacterium colombiense CECT 3035] gi|342132453|gb|EGT85682.1| Rieske 2Fe-2S family protein [Mycobacterium colombiense CECT 3035] Length=516 Score = 971 bits (2510), Expect = 0.0, Method: Compositional matrix adjust. Identities = 459/515 (90%), Positives = 487/515 (95%), Gaps = 0/515 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNS LDW ALG+CDYLYVSHLH Sbjct 1 MQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSALDWNALGDCDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFDA+NL HVNKDAVVLLPDFPVPDLRNEL+KLGFHRFFET+DSVKHR+ GP G+LD Sbjct 61 KDHFDAQNLAEHVNKDAVVLLPDFPVPDLRNELEKLGFHRFFETSDSVKHRIGGPKGELD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDSAL+V+DG TT FNMNDARPVDLDVLASEFGHIDVHMLQYSGAI Sbjct 121 VMIIALRAPADGPIGDSALLVSDGATTVFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMPARAK++FG QKRQRQMDRARQY+AQVGATWVVPSAGPPCFL PELR LNDD Sbjct 181 WYPMVYDMPARAKESFGVQKRQRQMDRARQYLAQVGATWVVPSAGPPCFLDPELRDLNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 DPANIFPDQMVFLDQMR HG DGGLLMIPGSTADFTG+TLNSL HPLP ++VEAIFTT Sbjct 241 HGDPANIFPDQMVFLDQMRRHGNDGGLLMIPGSTADFTGSTLNSLTHPLPTDEVEAIFTT 300 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 KA YIADYA+RMAPV+AAQ+AGWA A GEPLL+PLR LFEPIM QS+EICDGIGYPVEL Sbjct 301 GKADYIADYAERMAPVVAAQRAGWAPATGEPLLEPLRALFEPIMSQSDEICDGIGYPVEL 360 Query 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 +GPET++LDFPKRAVRE IPDE+ RYGFAIAPELVRTVLRD EPDWVNTIFLSTRFRAW Sbjct 361 VLGPETVILDFPKRAVRERIPDEKVRYGFAIAPELVRTVLRDGEPDWVNTIFLSTRFRAW 420 Query 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 RVGGYNEYLYTFFKCLTDERIAYADGWFAE HDDS+S+TL+GWEIQRRCPHLKADLSKFG Sbjct 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAETHDDSASVTLDGWEIQRRCPHLKADLSKFG 480 Query 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 VVEGNTLTCNLHGWQWRLDDGRCLTA+GHQLRSSR Sbjct 481 VVEGNTLTCNLHGWQWRLDDGRCLTAKGHQLRSSR 515 >gi|118620017|ref|YP_908349.1| hypothetical protein MUL_5001 [Mycobacterium ulcerans Agy99] gi|118572127|gb|ABL06878.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=516 Score = 967 bits (2500), Expect = 0.0, Method: Compositional matrix adjust. Identities = 455/515 (89%), Positives = 486/515 (95%), Gaps = 0/515 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGFLIQTQ+GSILCDPWVNPAYFASWFPFPDNS LDW A+G+CDYLYVSHLH Sbjct 1 MQVTSVGHAGFLIQTQSGSILCDPWVNPAYFASWFPFPDNSALDWDAIGDCDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFDAENLR+HVNKDAVVLLPDFPVPDLRNEL+KLGFHRFFETTDSVKHRL GP DLD Sbjct 61 KDHFDAENLRSHVNKDAVVLLPDFPVPDLRNELEKLGFHRFFETTDSVKHRLSGPRSDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 +MIIALRAPADGPIGDSALVV+DGETTAFNMNDARP++LD+LASEFGH+DVH+LQYSGAI Sbjct 121 IMIIALRAPADGPIGDSALVVSDGETTAFNMNDARPIELDMLASEFGHVDVHLLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMPARAK+AFG QKRQR MDRARQY+AQV ATWVVPSAGPPCFL PELR LNDD Sbjct 181 WYPMVYDMPARAKEAFGTQKRQRGMDRARQYVAQVDATWVVPSAGPPCFLDPELRELNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 SDPANIFPDQMVFLDQMR HG D GLL+IPGS DFTG+TLNSL HPLP E VEAIFTT Sbjct 241 RSDPANIFPDQMVFLDQMRIHGHDRGLLVIPGSIGDFTGSTLNSLSHPLPTEDVEAIFTT 300 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 K+AYIADYADRMAPV+AA++A WA A GEPLL+PLR LFEPIMLQSNEICDGIGYPVEL Sbjct 301 GKSAYIADYADRMAPVIAAERASWAPAEGEPLLEPLRALFEPIMLQSNEICDGIGYPVEL 360 Query 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 IG ET+VLDFPKRAVREPIP+E+FRYGFAIAPELVRTVLRD EPDWVNTIFLSTRF+AW Sbjct 361 VIGAETVVLDFPKRAVREPIPNEKFRYGFAIAPELVRTVLRDQEPDWVNTIFLSTRFQAW 420 Query 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 RVGGYNEYLYTFFKCLTD+RIAYADGWFAE HDDS+SITL+GWEIQRRCPHLKADLSKFG Sbjct 421 RVGGYNEYLYTFFKCLTDDRIAYADGWFAETHDDSASITLDGWEIQRRCPHLKADLSKFG 480 Query 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 VVEG+TLTCNLHGWQWRL+DGRCLT RGHQLRSSR Sbjct 481 VVEGDTLTCNLHGWQWRLEDGRCLTTRGHQLRSSR 515 >gi|240172627|ref|ZP_04751286.1| hypothetical protein MkanA1_25155 [Mycobacterium kansasii ATCC 12478] Length=516 Score = 962 bits (2488), Expect = 0.0, Method: Compositional matrix adjust. Identities = 453/515 (88%), Positives = 482/515 (94%), Gaps = 0/515 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGFLIQT AGSILCDPW+NPAYF SWFPFPDNS LDWGA+G+CDYLYVSHLH Sbjct 1 MQVTSVGHAGFLIQTHAGSILCDPWLNPAYFTSWFPFPDNSALDWGAVGDCDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFDAENLRA+VNKDAVVLLPDFPVPDLRNEL+KLGFHRFF+TTDSVKHRL GP G+LD Sbjct 61 KDHFDAENLRANVNKDAVVLLPDFPVPDLRNELEKLGFHRFFDTTDSVKHRLSGPKGELD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 +MIIALRAPADGPIGDSALVV+DGETTAFNMNDARP+DLDVLASEFG IDVHMLQYSGAI Sbjct 121 IMIIALRAPADGPIGDSALVVSDGETTAFNMNDARPIDLDVLASEFGPIDVHMLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMP RAK+AFG QKRQR MDRARQYIAQVGATWV+PSAGPPCFL PELRHLNDD Sbjct 181 WYPMVYDMPVRAKEAFGTQKRQRGMDRARQYIAQVGATWVIPSAGPPCFLDPELRHLNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 GSD ANIFPDQMVFLDQMR HG D GLLMIPGS ADF G LNSL+HPLP E VEAIFTT Sbjct 241 GSDSANIFPDQMVFLDQMRTHGHDRGLLMIPGSVADFAGAELNSLKHPLPVEDVEAIFTT 300 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 KA YIADYA+RMAPV+AA++A WA+A GEPLL+PLR LFEPIM+QS++ICDGIGYPVEL Sbjct 301 GKAKYIADYAERMAPVVAAERARWASAGGEPLLEPLRALFEPIMMQSDQICDGIGYPVEL 360 Query 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 +GPET+VLDFPKR VRE IPDE+ RYGFAIAPELVRTVLRD EPDWVNTIFLSTRFRAW Sbjct 361 VLGPETVVLDFPKRTVRERIPDEKARYGFAIAPELVRTVLRDREPDWVNTIFLSTRFRAW 420 Query 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 RVGGYNEYLYTFFKCLTDERI YADGWFAE HDDS+SITL+GWEIQRRCPHLKADLSKFG Sbjct 421 RVGGYNEYLYTFFKCLTDERITYADGWFAETHDDSASITLDGWEIQRRCPHLKADLSKFG 480 Query 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 VVEGNTLTCNLHGWQWRLDDGRCLT RGHQLRSS+ Sbjct 481 VVEGNTLTCNLHGWQWRLDDGRCLTTRGHQLRSSK 515 >gi|254822666|ref|ZP_05227667.1| Rieske 2Fe-2S family protein [Mycobacterium intracellulare ATCC 13950] Length=516 Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust. Identities = 450/515 (88%), Positives = 481/515 (94%), Gaps = 0/515 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGFLI+TQAGSILCDPWVNPAYFASWFPFPDNS LDW LG CDYLYVSHLH Sbjct 1 MQVTSVGHAGFLIETQAGSILCDPWVNPAYFASWFPFPDNSTLDWDKLGACDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFDA+NL HVNKDA VLLPDFPVPDLRN LQ+LGFHRFFET+DSVKHR+ GP G LD Sbjct 61 KDHFDAKNLAEHVNKDATVLLPDFPVPDLRNALQELGFHRFFETSDSVKHRIDGPRGGLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDSAL+V+DG TT FNMNDARPVDLDVLA+EFGHIDVH+LQYSGAI Sbjct 121 VMIIALRAPADGPIGDSALLVSDGATTVFNMNDARPVDLDVLAAEFGHIDVHLLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMPARAK++FG QKRQRQMDRARQY+AQVGATWVVPSAGPPCFL PELRHLNDD Sbjct 181 WYPMVYDMPARAKESFGVQKRQRQMDRARQYLAQVGATWVVPSAGPPCFLDPELRHLNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 +DPANIFPDQMVFLDQMR HG DGGLLM+PGSTADFTG+TLNSLRHPLP ++VEAIFTT Sbjct 241 HADPANIFPDQMVFLDQMRTHGHDGGLLMMPGSTADFTGSTLNSLRHPLPTDEVEAIFTT 300 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 KA YIA YA+RMAPV+AA++A WA AAGEPLL+ LR LFEPIM QS+EICDGIGYPVEL Sbjct 301 GKADYIAAYAERMAPVVAAERASWAPAAGEPLLESLRALFEPIMSQSDEICDGIGYPVEL 360 Query 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 +GPET++LDFPKRAVRE IPDE+ RYGF IAPELVRTVLRD EPDWVNTIFLSTRFRAW Sbjct 361 VLGPETVILDFPKRAVRERIPDEKVRYGFEIAPELVRTVLRDREPDWVNTIFLSTRFRAW 420 Query 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 RVGGYNEYLYTFFKCLTDERIAYADGWFAE HDDS+S+TL+GWEIQRRCPHLKADLSKFG Sbjct 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAETHDDSASVTLDGWEIQRRCPHLKADLSKFG 480 Query 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRS R Sbjct 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSRR 515 >gi|296166950|ref|ZP_06849366.1| Rieske 2Fe-2S family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897689|gb|EFG77279.1| Rieske 2Fe-2S family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=524 Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust. Identities = 453/515 (88%), Positives = 479/515 (94%), Gaps = 0/515 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 VQVTSVGHAGFLI+T AGSILCDPWVNPAYF SWFPFPDNSGLDW LG+CDYLY+SHLH Sbjct 9 VQVTSVGHAGFLIETTAGSILCDPWVNPAYFGSWFPFPDNSGLDWDRLGDCDYLYLSHLH 68 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFDA+NL HVNKDAVVLLPDFPVPDLRN LQ+LGF+RFFET+ SVKHR+ GP GDLD Sbjct 69 KDHFDAKNLAEHVNKDAVVLLPDFPVPDLRNALQELGFYRFFETSTSVKHRVSGPKGDLD 128 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGP+GDSALVV+DG TTAFNMNDARPVDLDVLA FGHIDVH LQYSGAI Sbjct 129 VMIIALRAPADGPLGDSALVVSDGVTTAFNMNDARPVDLDVLAPAFGHIDVHTLQYSGAI 188 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMPARAK++FG QKRQRQMDRARQYIAQVGATWV+PSAGPPCFL PELRHLNDD Sbjct 189 WYPMVYDMPARAKESFGVQKRQRQMDRARQYIAQVGATWVIPSAGPPCFLDPELRHLNDD 248 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 D ANIFPDQ+VFLDQMR+HG DGGLLMIPGSTADF+GTTLNSL HPLP ++VEAIFTT Sbjct 249 HGDAANIFPDQLVFLDQMRSHGHDGGLLMIPGSTADFSGTTLNSLSHPLPDDRVEAIFTT 308 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 K AYIADYA+RMAPVLAA++A WA A GEPLL+PLR LFEPIM S+EICDGIGYPVEL Sbjct 309 GKRAYIADYAERMAPVLAAERANWAPATGEPLLEPLRALFEPIMSASDEICDGIGYPVEL 368 Query 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 IGPET+VLDFPKRAVRE IPDE+ RYGFAIAPELVRTVLRD EPDWVNTIFLSTRFRAW Sbjct 369 VIGPETVVLDFPKRAVRERIPDEKVRYGFAIAPELVRTVLRDREPDWVNTIFLSTRFRAW 428 Query 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 RVGGYNEYLYTFFKCLTDERIAYADGWFAE HDDSSS+TL GWEIQRRCPHLKADLSKFG Sbjct 429 RVGGYNEYLYTFFKCLTDERIAYADGWFAETHDDSSSVTLEGWEIQRRCPHLKADLSKFG 488 Query 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR Sbjct 489 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 523 >gi|118464045|ref|YP_879494.1| Rieske 2Fe-2S family protein [Mycobacterium avium 104] gi|118165332|gb|ABK66229.1| Rieske 2Fe-2S family protein [Mycobacterium avium 104] Length=512 Score = 942 bits (2434), Expect = 0.0, Method: Compositional matrix adjust. Identities = 446/515 (87%), Positives = 479/515 (94%), Gaps = 4/515 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGFLI+TQAGSILCDPWVNPAYFASWFPFPDNS LDW LG+CDYLYVSHLH Sbjct 1 MQVTSVGHAGFLIRTQAGSILCDPWVNPAYFASWFPFPDNSTLDWDQLGDCDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFDA+NL HVNKDAVVLLP+FPVPDLRN LQ+LGFHRFFET DSVKHR+ G LD Sbjct 61 KDHFDAKNLAEHVNKDAVVLLPEFPVPDLRNALQELGFHRFFETADSVKHRV----GGLD 116 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDSALVV+DG TT FNMNDARPV+LDVLASEFGHIDVH+LQYSGAI Sbjct 117 VMIIALRAPADGPIGDSALVVSDGSTTLFNMNDARPVELDVLASEFGHIDVHLLQYSGAI 176 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMPARAK++FG QKRQRQMDRARQY+AQVGATWVVPSAGPPCFL PELRHLNDD Sbjct 177 WYPMVYDMPARAKESFGIQKRQRQMDRARQYLAQVGATWVVPSAGPPCFLDPELRHLNDD 236 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 DPANIFPDQMVFL+QMRAHGQ GGLLMIPGSTADF+G+TLNSL HPLP +VEAIFTT Sbjct 237 HGDPANIFPDQMVFLEQMRAHGQGGGLLMIPGSTADFSGSTLNSLHHPLPTAEVEAIFTT 296 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 KA YIA YA+RMAPV+AA++AGWA A GEPLL+PLR LFEPIM QS+EICDGIGYPVEL Sbjct 297 GKADYIAAYAERMAPVIAAERAGWAPATGEPLLEPLRALFEPIMSQSDEICDGIGYPVEL 356 Query 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 +GPE ++LDFPKR VREPIPDE+ RYGF IAPELVRTVLRD EPDWVNTIFLSTRF+AW Sbjct 357 VLGPERVILDFPKRTVREPIPDEKVRYGFTIAPELVRTVLRDREPDWVNTIFLSTRFKAW 416 Query 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 RVGGYNEYLYTFFKCLTDERIAYADGWFAE HD+S+SITL+GW+IQRRCPHLKADLSKFG Sbjct 417 RVGGYNEYLYTFFKCLTDERIAYADGWFAETHDNSASITLDGWQIQRRCPHLKADLSKFG 476 Query 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 VVEGNTLTCNLHGWQWRLDDGRCLTA+GHQLRSSR Sbjct 477 VVEGNTLTCNLHGWQWRLDDGRCLTAKGHQLRSSR 511 >gi|254773259|ref|ZP_05214775.1| Rieske 2Fe-2S family protein [Mycobacterium avium subsp. avium ATCC 25291] Length=512 Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust. Identities = 445/515 (87%), Positives = 479/515 (94%), Gaps = 4/515 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGFLI+TQAGSILCDPWVNPAYFASWFPFPDNS LDW LG+CDYLYVSHLH Sbjct 1 MQVTSVGHAGFLIRTQAGSILCDPWVNPAYFASWFPFPDNSTLDWDQLGDCDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFDA+NL HVNKDAVVLLP+FPVPDLRN LQ+LGFHRFFET DSVKHR+ G LD Sbjct 61 KDHFDAKNLAEHVNKDAVVLLPEFPVPDLRNALQELGFHRFFETADSVKHRV----GGLD 116 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDSALVV+DG TT FNMNDARPV+LDVLASEFGHIDVH+LQYSGAI Sbjct 117 VMIIALRAPADGPIGDSALVVSDGSTTLFNMNDARPVELDVLASEFGHIDVHLLQYSGAI 176 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMPARAK++FG QKRQRQMDRARQY+AQVGATWVVPSAGPPCFL PELRHLNDD Sbjct 177 WYPMVYDMPARAKESFGIQKRQRQMDRARQYLAQVGATWVVPSAGPPCFLDPELRHLNDD 236 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 DPANIFPDQMVFL+QMRAHGQ GGLLMIPGSTADF+G+TLNSL HPLP +VEAIFTT Sbjct 237 HGDPANIFPDQMVFLEQMRAHGQGGGLLMIPGSTADFSGSTLNSLHHPLPTAEVEAIFTT 296 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 KA YIA YA+RMAPV+AA++AGWA A GEPLL+PLR LFEP+M QS+EICDGIGYPVEL Sbjct 297 GKADYIAAYAERMAPVIAAERAGWAPATGEPLLEPLRALFEPVMSQSDEICDGIGYPVEL 356 Query 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 +GPE ++LDFPKR VREPIPDE+ RYGF IAPELVRTVLRD EPDWVNTIFLSTRF+AW Sbjct 357 VLGPERVILDFPKRTVREPIPDEKVRYGFTIAPELVRTVLRDREPDWVNTIFLSTRFKAW 416 Query 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 RVGGYNEYLYTFFKCLTDERIAYADGWFAE HD+S+SITL+GW+IQRRCPHLKADLSKFG Sbjct 417 RVGGYNEYLYTFFKCLTDERIAYADGWFAETHDNSASITLDGWQIQRRCPHLKADLSKFG 476 Query 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 VVEGNTLTCNLHGWQWRLDDGRCLTA+GHQLRSSR Sbjct 477 VVEGNTLTCNLHGWQWRLDDGRCLTAKGHQLRSSR 511 >gi|41406302|ref|NP_959138.1| hypothetical protein MAP0204c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41394650|gb|AAS02521.1| hypothetical protein MAP_0204c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336461890|gb|EGO40745.1| putative Zn-dependent hydrolase of beta-lactamase [Mycobacterium avium subsp. paratuberculosis S397] Length=512 Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust. Identities = 445/515 (87%), Positives = 479/515 (94%), Gaps = 4/515 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGFLI+TQAGSILCDPWVNPAYFASWFPFPDNS LDW LG+CDYLYVSHLH Sbjct 1 MQVTSVGHAGFLIRTQAGSILCDPWVNPAYFASWFPFPDNSTLDWDQLGDCDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFDA+NL HVNKDAVVLLP+FPVPDLRN LQ+LGFHRFFET DSVKHR+ G LD Sbjct 61 KDHFDAKNLAEHVNKDAVVLLPEFPVPDLRNALQELGFHRFFETADSVKHRV----GGLD 116 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDSALVV+DG TT FNMNDARPV+LD+LASEFGHIDVH+LQYSGAI Sbjct 117 VMIIALRAPADGPIGDSALVVSDGSTTLFNMNDARPVELDMLASEFGHIDVHLLQYSGAI 176 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMPARAK++FG QKRQRQMDRARQY+AQVGATWVVPSAGPPCFL PELRHLNDD Sbjct 177 WYPMVYDMPARAKESFGIQKRQRQMDRARQYLAQVGATWVVPSAGPPCFLDPELRHLNDD 236 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 DPANIFPDQMVFL+Q+RAHGQ GGLLMIPGSTADF+G+TLNSL HPLP +VEAIF T Sbjct 237 HGDPANIFPDQMVFLEQLRAHGQGGGLLMIPGSTADFSGSTLNSLHHPLPTAEVEAIFAT 296 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 KA YIA YA+RMAPV+AA++AGWA A GEPLL+PLR LFEPIM QS+EICDGIGYPVEL Sbjct 297 GKADYIAAYAERMAPVIAAERAGWAPATGEPLLEPLRALFEPIMSQSDEICDGIGYPVEL 356 Query 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 +GPE ++LDFPKR VREPIPDE+ RYGFAIAPELVRTVLRD EPDWVNTIFLSTRF+AW Sbjct 357 VLGPERVILDFPKRTVREPIPDEKVRYGFAIAPELVRTVLRDREPDWVNTIFLSTRFKAW 416 Query 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 RVGGYNEYLYTFFKCLTDERIAYADGWFAE HD+S+SITL+GWEIQRRCPHLKADLSKFG Sbjct 417 RVGGYNEYLYTFFKCLTDERIAYADGWFAETHDNSASITLDGWEIQRRCPHLKADLSKFG 476 Query 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 VVEGNTLTCNLHGWQWRLDDGRCLTA+GHQLRSSR Sbjct 477 VVEGNTLTCNLHGWQWRLDDGRCLTAKGHQLRSSR 511 >gi|315446520|ref|YP_004079399.1| Zn-dependent hydrolase of beta-lactamase fold protein [Mycobacterium sp. Spyr1] gi|315264823|gb|ADU01565.1| predicted Zn-dependent hydrolase of beta-lactamase fold protein [Mycobacterium sp. Spyr1] Length=521 Score = 913 bits (2360), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/519 (85%), Positives = 469/519 (91%), Gaps = 4/519 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGF I T+AGSILCDPWVNPAYFASWFPFPDN+GLDW ALG DYLYVSHLH Sbjct 1 MQVTSVGHAGFRIDTKAGSILCDPWVNPAYFASWFPFPDNTGLDWPALGAVDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFD +NL HVNKDAVVLLPDFPVPDLR EL+KLGFH FFETTDSVKHR+ GP GDLD Sbjct 61 KDHFDPKNLAEHVNKDAVVLLPDFPVPDLRRELEKLGFHTFFETTDSVKHRISGPKGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDS LVV+DG TT FNMNDARPVDLD+L ++FG IDVHMLQYSGAI Sbjct 121 VMIIALRAPADGPIGDSGLVVSDGVTTVFNMNDARPVDLDMLHADFGQIDVHMLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMPARAK+AFG QKRQRQMDR RQYIAQVGATWVVPSAGPPCFL PELR LNDD Sbjct 181 WYPMVYDMPARAKEAFGTQKRQRQMDRCRQYIAQVGATWVVPSAGPPCFLDPELRDLNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 DPANIFPDQ+VFL+QMR HG DGGLLMIPGSTADFTG+ LNSL HP+P + V AIFTT Sbjct 241 HGDPANIFPDQVVFLEQMRNHGHDGGLLMIPGSTADFTGSQLNSLEHPIPDDDVLAIFTT 300 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 KA YIAD+A+RMAPVLAA+KA WA A GEPLL+PLR LFEPIMLQS++ICDGIGYPVEL Sbjct 301 GKADYIADFAERMAPVLAAEKASWAPAEGEPLLEPLRELFEPIMLQSDQICDGIGYPVEL 360 Query 361 AIGP----ETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTR 416 +G ET+VLDFPKRAVRE IPDE+FRYGF IAPELVRTVLRD EPDWVNTIFLSTR Sbjct 361 RLGDGDRHETVVLDFPKRAVREAIPDEKFRYGFGIAPELVRTVLRDREPDWVNTIFLSTR 420 Query 417 FRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADL 476 FRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDD++SITL GWEIQRRCPHLKADL Sbjct 421 FRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDTASITLEGWEIQRRCPHLKADL 480 Query 477 SKFGVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 SKFGV+EG TLTCNLHGWQW L +GRCLT +GH+LRS++ Sbjct 481 SKFGVIEGTTLTCNLHGWQWNLTNGRCLTTKGHELRSTK 519 >gi|145221744|ref|YP_001132422.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145214230|gb|ABP43634.1| Rieske (2Fe-2S) domain protein [Mycobacterium gilvum PYR-GCK] Length=521 Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/519 (84%), Positives = 470/519 (91%), Gaps = 4/519 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGF I T+AGSILCDPWVNPAYFASWFPFPDN+GLDW ALG DYLYVSHLH Sbjct 1 MQVTSVGHAGFRIDTKAGSILCDPWVNPAYFASWFPFPDNTGLDWPALGAVDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFD +NL HVNKDAVVLLPDFPVPDLR EL+KLGFH FFETTDSVKHR+ GP GDLD Sbjct 61 KDHFDPKNLAEHVNKDAVVLLPDFPVPDLRRELEKLGFHTFFETTDSVKHRVSGPKGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDS LVV+DG TTAFNMNDARPVDLD++ ++FG IDVHMLQYSGAI Sbjct 121 VMIIALRAPADGPIGDSGLVVSDGVTTAFNMNDARPVDLDMVHADFGQIDVHMLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMPARAK AFG QKRQRQMDR RQYIAQVGATWV+PSAGPPCFL PELR LNDD Sbjct 181 WYPMVYDMPARAKQAFGTQKRQRQMDRCRQYIAQVGATWVIPSAGPPCFLDPELRDLNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 DPANIFPDQ+VFLDQMR+HG DGGLLMIPGSTADFTG+ L SL+HP+P + V AIFTT Sbjct 241 HGDPANIFPDQVVFLDQMRSHGHDGGLLMIPGSTADFTGSQLLSLKHPIPDDDVMAIFTT 300 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 KA YIAD+A+RMAPVLAA+KA WA A GEPLL+PLR LFEPIMLQS++ICDGIGYPVEL Sbjct 301 GKADYIADFAERMAPVLAAEKASWAPAEGEPLLEPLRELFEPIMLQSDQICDGIGYPVEL 360 Query 361 AIG----PETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTR 416 +G E +VLDFPKRAVRE IPDE+FRYGFAIAPELVRTVLRD EPDWVNTIFLSTR Sbjct 361 RLGDGDRQEVVVLDFPKRAVREAIPDEKFRYGFAIAPELVRTVLRDGEPDWVNTIFLSTR 420 Query 417 FRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADL 476 FRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDD++SITL GWEIQRRCPHLKADL Sbjct 421 FRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDTASITLEGWEIQRRCPHLKADL 480 Query 477 SKFGVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 SKFGV+EG TLTCNLHGWQW L +GRCLT +GH+LRS++ Sbjct 481 SKFGVIEGTTLTCNLHGWQWNLTNGRCLTTKGHELRSTK 519 >gi|126437970|ref|YP_001073661.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium sp. JLS] gi|126237770|gb|ABO01171.1| Rieske (2Fe-2S) domain protein [Mycobacterium sp. JLS] Length=516 Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/513 (84%), Positives = 469/513 (92%), Gaps = 0/513 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGF I T+AGSILCDPWVNPAYFASW PFPDN+GLDW ALG+ DYLYVSHLH Sbjct 1 MQVTSVGHAGFRIDTKAGSILCDPWVNPAYFASWVPFPDNTGLDWDALGDVDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFD +NLR HVNKDAVVLLPD+PVPDLR EL+ LGFHRFFETT+SVKHR+ GP GDLD Sbjct 61 KDHFDPKNLRDHVNKDAVVLLPDYPVPDLRRELETLGFHRFFETTNSVKHRVSGPKGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDS LVV DG+T AFNMNDARPVDLDVLA++FG +DVHMLQ+SGAI Sbjct 121 VMIIALRAPADGPIGDSGLVVDDGDTVAFNMNDARPVDLDVLAADFGRVDVHMLQFSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMPARAK+AFG QKRQRQMDR RQYIAQVGATWV+PSAGPPCFL PELRHLNDD Sbjct 181 WYPMVYDMPARAKEAFGTQKRQRQMDRCRQYIAQVGATWVIPSAGPPCFLDPELRHLNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 DP+NIFPDQMVFLDQMR HG DGGLLMIPGSTA+FTG+ L+SL HPLP ++VEAIFTT Sbjct 241 HGDPSNIFPDQMVFLDQMRRHGHDGGLLMIPGSTAEFTGSVLDSLTHPLPDDEVEAIFTT 300 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 KA Y+ +A RMAPVLAA+KA WA A G+PLL+PLR FEPIM+QS++ICDGIGYPVEL Sbjct 301 GKADYLEAFAQRMAPVLAAEKATWAPAHGDPLLEPLRAKFEPIMVQSDQICDGIGYPVEL 360 Query 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 +G ET+VLDFPKR VREPIPDE+FRYGF IAPELVRTVLRD EPDWVNTIFLSTRFRAW Sbjct 361 RLGAETVVLDFPKRVVREPIPDEKFRYGFEIAPELVRTVLRDGEPDWVNTIFLSTRFRAW 420 Query 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 RVGGYNEYLYTFFKCLTDER+AYADGWFAEAHDDS+SIT+ G+E QRRCPHLKADLSKFG Sbjct 421 RVGGYNEYLYTFFKCLTDERVAYADGWFAEAHDDSASITMGGYEFQRRCPHLKADLSKFG 480 Query 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRS 513 VVEGNTLTCNLHGWQW L++GRCLT +GH+LR+ Sbjct 481 VVEGNTLTCNLHGWQWNLENGRCLTTKGHELRT 513 >gi|108801989|ref|YP_642186.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium sp. MCS] gi|119871141|ref|YP_941093.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium sp. KMS] gi|108772408|gb|ABG11130.1| Rieske (2Fe-2S) region [Mycobacterium sp. MCS] gi|119697230|gb|ABL94303.1| Rieske (2Fe-2S) domain protein [Mycobacterium sp. KMS] Length=516 Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/513 (84%), Positives = 468/513 (92%), Gaps = 0/513 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGF I T+AGSILCDPWVNPAYFASW PFPDN+GLDW ALG+ DYLYVSHLH Sbjct 1 MQVTSVGHAGFRIDTKAGSILCDPWVNPAYFASWVPFPDNTGLDWDALGDVDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFD +NLR HVNKDAVVLLPD+PVPDLR EL+ LGFHRFFETT+SVKHR+ GP GDLD Sbjct 61 KDHFDPKNLRDHVNKDAVVLLPDYPVPDLRRELETLGFHRFFETTNSVKHRVSGPKGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDS LVV DG+T AFNMNDARPVDLDVLA++FG +DVHMLQ+SGAI Sbjct 121 VMIIALRAPADGPIGDSGLVVDDGDTVAFNMNDARPVDLDVLAADFGRVDVHMLQFSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMPARAK+AFG QKRQRQMDR RQYIAQVGATWV+PSAGPPCFL PELRHLNDD Sbjct 181 WYPMVYDMPARAKEAFGTQKRQRQMDRCRQYIAQVGATWVIPSAGPPCFLDPELRHLNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 DP+NIFPDQMVFLDQMR HG DGGLLMIPGSTA+FTG+ L+SL HPLP ++VEAIFTT Sbjct 241 HGDPSNIFPDQMVFLDQMRRHGHDGGLLMIPGSTAEFTGSVLDSLTHPLPDDEVEAIFTT 300 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 KA Y+ +A RMAPVLAA+KA WA A G+PLL+PLR FEPIM+QS++ICDGIGYPVEL Sbjct 301 GKADYLEAFAQRMAPVLAAEKATWAPAHGDPLLEPLRAKFEPIMVQSDQICDGIGYPVEL 360 Query 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 +G ET+VLDFPKR VREPIPDE+FRYGF IAPELVRTVLRD EPDWVNTIFLSTRFRAW Sbjct 361 RLGAETVVLDFPKRVVREPIPDEKFRYGFEIAPELVRTVLRDGEPDWVNTIFLSTRFRAW 420 Query 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 RVGGYNEYLYTFFKCLTDER+AYADGWFAEAHDDS+SIT+ G+E QRRCPHLKADLSKFG Sbjct 421 RVGGYNEYLYTFFKCLTDERVAYADGWFAEAHDDSASITMGGYEFQRRCPHLKADLSKFG 480 Query 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRS 513 VVEGNTLTCNLHGWQW L+ GRCLT +GH+LR+ Sbjct 481 VVEGNTLTCNLHGWQWNLESGRCLTTKGHELRT 513 >gi|120406599|ref|YP_956428.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119959417|gb|ABM16422.1| Rieske (2Fe-2S) domain protein [Mycobacterium vanbaalenii PYR-1] Length=520 Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust. Identities = 432/519 (84%), Positives = 467/519 (90%), Gaps = 4/519 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGF I T+AGSILCDPW+NPAYFASWFPFPDNS LDW ALG+ DYLYVSHLH Sbjct 1 MQVTSVGHAGFRIDTKAGSILCDPWLNPAYFASWFPFPDNSDLDWAALGDVDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFD +NLR HVNKDAVVLLPDFPVPDLR EL+KLGFHRFFET DSVKHR+ GP G+LD Sbjct 61 KDHFDPQNLRDHVNKDAVVLLPDFPVPDLRRELEKLGFHRFFETADSVKHRVSGPKGELD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMI+ALRAPADGPIGDS LVV DGETT FNMNDARPVDLD+L ++FG IDVHMLQYSGAI Sbjct 121 VMIVALRAPADGPIGDSGLVVDDGETTVFNMNDARPVDLDMLHTDFGQIDVHMLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMPARAK+AFG QKRQRQMDR RQYIAQVGATWV+PSAGPPCFL PELR LNDD Sbjct 181 WYPMVYDMPARAKEAFGIQKRQRQMDRCRQYIAQVGATWVIPSAGPPCFLDPELRGLNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 DPANIFPDQ+VFLDQMR HG DGGLLMIPGS ADF G+ L SL HP+P + V+AIFTT Sbjct 241 HGDPANIFPDQVVFLDQMRTHGHDGGLLMIPGSAADFAGSQLRSLTHPIPDDDVQAIFTT 300 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 KA YIADYA+RMAPVLAA++A WA AAG+PLL+PLR LFEPIML S++ICDGIGYPVEL Sbjct 301 GKADYIADYAERMAPVLAAERASWAPAAGKPLLEPLRELFEPIMLASDQICDGIGYPVEL 360 Query 361 AIGP----ETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTR 416 + ETIVLDFPKRAVRE IPDE+FRYGFAIAPELVRTV+RD EPDWVNTIFLSTR Sbjct 361 RLHSRGHEETIVLDFPKRAVREAIPDEKFRYGFAIAPELVRTVVRDREPDWVNTIFLSTR 420 Query 417 FRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADL 476 F AWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDD +SITL+GWEIQRRCPHLKADL Sbjct 421 FTAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDCASITLDGWEIQRRCPHLKADL 480 Query 477 SKFGVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 SKFGVVEGNTLTCNLHGWQW L +GRCLT GH+LRS++ Sbjct 481 SKFGVVEGNTLTCNLHGWQWNLTNGRCLTTNGHELRSAK 519 >gi|169627261|ref|YP_001700910.1| Rieske family iron-sulfur cluster-binding protein [Mycobacterium abscessus ATCC 19977] gi|169239228|emb|CAM60256.1| Iron-sulfur cluster-binding protein, RIESKE family [Mycobacterium abscessus] Length=517 Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust. Identities = 417/515 (81%), Positives = 455/515 (89%), Gaps = 0/515 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 ++VTSVGHAGF I+T AGSILCDPWVNPAYFASWFPFPDNS LDW G CDYLYVSHLH Sbjct 1 MRVTSVGHAGFFIETAAGSILCDPWVNPAYFASWFPFPDNSTLDWDRFGSCDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDH+D +NL HVNKDAVVLLPD+PVPDLR EL+ LGFH F ET DSVKHR+ GP GDLD Sbjct 61 KDHYDPKNLTDHVNKDAVVLLPDYPVPDLRRELEGLGFHTFVETEDSVKHRVSGPKGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 +MIIALRAPADGPIGDS LVV+DG TTAFNMNDARPVDLDVLA EFGHIDVHMLQYSGAI Sbjct 121 IMIIALRAPADGPIGDSGLVVSDGTTTAFNMNDARPVDLDVLAEEFGHIDVHMLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMPARAK+AFG QKRQRQMDR RQYIAQVGATWV+PSAGPPCFL LR LNDD Sbjct 181 WYPMVYDMPARAKEAFGTQKRQRQMDRCRQYIAQVGATWVIPSAGPPCFLDTGLRDLNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 DPANIFPDQ+VFLDQMR HG D GLLMIPG+ ADFT + LNSL HP+ E+ E IF Sbjct 241 HDDPANIFPDQLVFLDQMRQHGHDKGLLMIPGTVADFTASELNSLEHPVSTEEAEDIFGA 300 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 KAAYI YA RMAPVLAA+K+ WA A GEPLL PLR FEPIM Q+++ICDGIGYPVEL Sbjct 301 GKAAYIEAYAQRMAPVLAAEKSSWAPAEGEPLLAPLRAKFEPIMAQTDQICDGIGYPVEL 360 Query 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 +G ET+VLDFPKR VREPIP+E++RYGF IAPELVRTVLRD+EPDWVNTIFLSTRF+AW Sbjct 361 RLGSETVVLDFPKRIVREPIPNEKYRYGFEIAPELVRTVLRDDEPDWVNTIFLSTRFKAW 420 Query 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDS+SITL+GWEIQRRCPHLKADLSKFG Sbjct 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSASITLDGWEIQRRCPHLKADLSKFG 480 Query 481 VVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 VVEG LTCNLHGW+W L++GRCLT++GH+LRS + Sbjct 481 VVEGKNLTCNLHGWEWNLENGRCLTSKGHELRSRK 515 >gi|118474008|ref|YP_890623.1| Rieske 2Fe-2S family protein [Mycobacterium smegmatis str. MC2 155] gi|302595984|sp|A0R635.1|Y6410_MYCS2 RecName: Full=Putative Rieske 2Fe-2S iron-sulfur protein MSMEG_6410 gi|118175295|gb|ABK76191.1| Rieske 2Fe-2S family protein [Mycobacterium smegmatis str. MC2 155] Length=518 Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/519 (83%), Positives = 465/519 (90%), Gaps = 6/519 (1%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGFLI+++AGSILCDPWVNPAYFASWFPFPDNS LDW ALG+ DYLYVSHLH Sbjct 1 MQVTSVGHAGFLIESRAGSILCDPWVNPAYFASWFPFPDNSQLDWDALGDVDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFD E+LR +VNKDAVVLLPD+PVPDLR EL+KLGFH FFETTDSVKH + GP GDLD Sbjct 61 KDHFDPEHLRRYVNKDAVVLLPDYPVPDLRRELEKLGFHNFFETTDSVKHTVSGPKGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDS LVV+D TT FNMNDARPVDLDVL ++FG IDVHMLQYSGAI Sbjct 121 VMIIALRAPADGPIGDSGLVVSDRVTTVFNMNDARPVDLDVLHTDFGQIDVHMLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMPARAK+AFG QKRQRQMDR RQYIAQVGATWVVPSAGPPCFL PELR LNDD Sbjct 181 WYPMVYDMPARAKEAFGIQKRQRQMDRCRQYIAQVGATWVVPSAGPPCFLDPELRDLNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 DPANIFPDQMVFL+Q+R HG DGGLLMIPGSTADFTG+TLNSL HP+ + E+IFTT Sbjct 241 HGDPANIFPDQMVFLEQLRIHGHDGGLLMIPGSTADFTGSTLNSLTHPV--DDPESIFTT 298 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 KAAYI DYA RMAPVLAA+KA WA +AGEP+L+ LR LFEPIM Q+++ICDGIGYPVEL Sbjct 299 GKAAYIEDYAQRMAPVLAAEKARWAPSAGEPMLEALRALFEPIMTQTDQICDGIGYPVEL 358 Query 361 AIG----PETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTR 416 + ET+VLDFPKR VREPIPDE+FRYGF I LVRTVLRD EPDWVNTIFLSTR Sbjct 359 RLTGRDHNETVVLDFPKRVVREPIPDEKFRYGFEIPAALVRTVLRDEEPDWVNTIFLSTR 418 Query 417 FRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADL 476 FRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITL+G++IQRRCPHLKADL Sbjct 419 FRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLDGFQIQRRCPHLKADL 478 Query 477 SKFGVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 SKFGVVEGNTLTCNLHGWQW L++GRCLT +GH+LR + Sbjct 479 SKFGVVEGNTLTCNLHGWQWNLENGRCLTTKGHELRCQK 517 >gi|333992774|ref|YP_004525388.1| hypothetical protein JDM601_4134 [Mycobacterium sp. JDM601] gi|333488742|gb|AEF38134.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=517 Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/519 (79%), Positives = 449/519 (87%), Gaps = 7/519 (1%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 ++VTSVGHAGF I T AGSILCDPWVNPAYFASWFPFPDNS LDW ALG+CDYLY+SHLH Sbjct 1 MRVTSVGHAGFRIDTAAGSILCDPWVNPAYFASWFPFPDNSALDWDALGDCDYLYISHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 DHFD +L AHVNKDA VLLPD+PVPDLR EL+ LGFHRFFET+DSV+H + GP G+LD Sbjct 61 HDHFDPRHLAAHVNKDATVLLPDYPVPDLRRELEALGFHRFFETSDSVRHTVTGPKGELD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDS LVV DG TT FNMND+RP+DLDVL + F IDVH+LQYSGAI Sbjct 121 VMIIALRAPADGPIGDSGLVVCDGVTTVFNMNDSRPIDLDVLTA-FDTIDVHLLQYSGAI 179 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMPARAK AFG QKRQRQMDRARQY+A VGA WVVPSAGPPCFL ELRHLNDD Sbjct 180 WYPMVYDMPARAKQAFGTQKRQRQMDRARQYVAHVGARWVVPSAGPPCFLDSELRHLNDD 239 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 DPANIFPDQ+VFLDQ+R +G DGGLLM+PG+TADFTG L+SL H P + VE IFT Sbjct 240 HGDPANIFPDQLVFLDQLRRNGHDGGLLMVPGTTADFTGAQLDSLTH--PDDDVETIFTA 297 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 KAAYIA YADRMAPVLAA+KA WA AAG +L+ LR LFEPIM +SNEICDGIGYPVEL Sbjct 298 GKAAYIAAYADRMAPVLAAEKASWAPAAGPAMLEGLRALFEPIMGRSNEICDGIGYPVEL 357 Query 361 AI-GP---ETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTR 416 + GP ET+VLDFPKR VREP+P E+FRYGFAI PELVRTVLRD EPDWVNTIFLSTR Sbjct 358 VLDGPGHTETVVLDFPKRMVREPVPGEKFRYGFAIPPELVRTVLRDEEPDWVNTIFLSTR 417 Query 417 FRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADL 476 F+AWRVGGYNEYLYTFFKCLT++RI YADGWF E+HDDS++ITL GW+IQRRCPH+KADL Sbjct 418 FKAWRVGGYNEYLYTFFKCLTEDRIVYADGWFGESHDDSATITLAGWQIQRRCPHMKADL 477 Query 477 SKFGVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 SKFGVV+G TLTCN HGWQW L GRCLTA+GH+LR + Sbjct 478 SKFGVVDGETLTCNQHGWQWDLRTGRCLTAKGHELRCEK 516 >gi|54022111|ref|YP_116353.1| hypothetical protein nfa1470 [Nocardia farcinica IFM 10152] gi|54013619|dbj|BAD54989.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=511 Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/516 (77%), Positives = 437/516 (85%), Gaps = 7/516 (1%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +Q+TSVGHAGF I+T AGSILCDPWVNPAYF SWFPFPDN+GLDW LG CD+LYVSHLH Sbjct 1 MQITSVGHAGFHIRTAAGSILCDPWVNPAYFGSWFPFPDNTGLDWDELGNCDFLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 +DHFDA+NL HVNKDA VLLPD+PVPDLR EL+KLGFH+FFET DSVKH + GP GDLD Sbjct 61 RDHFDAKNLAEHVNKDATVLLPDYPVPDLRRELEKLGFHKFFETEDSVKHTVTGPGGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 +MIIALRAPADGPIGDS LVV+DGETT FNMNDARPVD+DVL FGHID+H+LQYSGAI Sbjct 121 IMIIALRAPADGPIGDSGLVVSDGETTCFNMNDARPVDMDVLHEAFGHIDIHLLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYD+PAR K FG QKRQR MDRAR YI QVGATWVVPSAGPP FL PELR+LNDD Sbjct 181 WYPMVYDIPARTKSNFGKQKRQRGMDRARSYIEQVGATWVVPSAGPPVFLDPELRYLNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 D NIFPDQMVFL+QMR HG +GG+LMIPGS AD G L+ L HP +++ Sbjct 241 RGDEGNIFPDQMVFLEQMRIHGNEGGILMIPGSVADVRGKELD-LTHPFDPDRIYG---- 295 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 DKAAYI D A RMAPVLAA+KA WA G LL+PL+ LFEPIM QS+ ICDGIGYPV L Sbjct 296 DKAAYIEDMAQRMAPVLAAEKATWAHGEGS-LLEPLKELFEPIMAQSDLICDGIGYPVGL 354 Query 361 AIGPETIVLDFPKRAVREPIPDE-RFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRA 419 +G ET+VLDFPKR VR PI E R+RYGF IAPELVRTVLRDNEPDWVNTIFLSTRF+A Sbjct 355 VLGEETVVLDFPKRVVRAPIEGEGRYRYGFRIAPELVRTVLRDNEPDWVNTIFLSTRFQA 414 Query 420 WRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKF 479 WR+GGYNE+LYTFFKCLTDERIAYADGWFAEAHDDS+S + GWEIQRRCPHLKADLSKF Sbjct 415 WRIGGYNEFLYTFFKCLTDERIAYADGWFAEAHDDSASTEIAGWEIQRRCPHLKADLSKF 474 Query 480 GVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 GVVEG TLTCNLHGWQW L+ GRC T++GH+LRS + Sbjct 475 GVVEGTTLTCNLHGWQWDLESGRCKTSKGHELRSRK 510 >gi|111021028|ref|YP_704000.1| hypothetical protein RHA1_ro04045 [Rhodococcus jostii RHA1] gi|110820558|gb|ABG95842.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=543 Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/516 (77%), Positives = 436/516 (85%), Gaps = 3/516 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 VQVTSVGHAGF IQT+AGSILCDPWVNPAYF SWFPFPDN+ LDW ALG CDYLYVSHLH Sbjct 29 VQVTSVGHAGFHIQTEAGSILCDPWVNPAYFGSWFPFPDNTQLDWDALGNCDYLYVSHLH 88 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFD ENL HVNKDA VLLPD+PVPDLR EL+ LGFH+FFET DSVKH++ GP GDLD Sbjct 89 KDHFDPENLSKHVNKDATVLLPDYPVPDLRRELEALGFHKFFETEDSVKHKVTGPKGDLD 148 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 +MIIALRAPADGPIGDS LVV+DGETT FNMNDARPVD+DVL EFG ID+H+LQYSGAI Sbjct 149 IMIIALRAPADGPIGDSGLVVSDGETTCFNMNDARPVDMDVLHDEFGKIDIHLLQYSGAI 208 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYD+P + K FG QKRQR MDR R YI QV ATWVVPSAGPP FL LR+LNDD Sbjct 209 WYPMVYDIPTKTKANFGKQKRQRGMDRCRSYIEQVAATWVVPSAGPPVFLDDALRYLNDD 268 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 D NIFPDQ+ FL+QMR HG DGG+LMIPGSTAD G L +L HP+P +V+ IF + Sbjct 269 RGDEGNIFPDQITFLEQMRIHGNDGGVLMIPGSTADLKGGEL-TLTHPIPDAEVDKIF-S 326 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 DKAAYI D A RMAPVLAA+KA WA A GEPLL+ L+ FEPIM QS+ ICDGIGYPV L Sbjct 327 DKAAYIEDMAKRMAPVLAAEKATWAPAEGEPLLEALKAKFEPIMKQSDLICDGIGYPVGL 386 Query 361 AIGPETIVLDFPKRAVR-EPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRA 419 +G ET+VLDFP+R VR D ++RYGF IAPELVRTVLRD+EPDWVNTIFLSTRF A Sbjct 387 VMGDETVVLDFPQRTVRPRGEKDGKYRYGFRIAPELVRTVLRDDEPDWVNTIFLSTRFEA 446 Query 420 WRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKF 479 WRVGGYNE+LYTFFKCLTDERIAYADGWFAEAHDDS+SI L G+EIQRRCPHLKADLSKF Sbjct 447 WRVGGYNEFLYTFFKCLTDERIAYADGWFAEAHDDSASIELGGYEIQRRCPHLKADLSKF 506 Query 480 GVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 GVV+G LTCNLHGWQW L+ GRC T++GH+LRS++ Sbjct 507 GVVDGTNLTCNLHGWQWDLESGRCKTSKGHELRSTK 542 >gi|226363333|ref|YP_002781115.1| hypothetical protein ROP_39230 [Rhodococcus opacus B4] gi|226241822|dbj|BAH52170.1| hypothetical protein [Rhodococcus opacus B4] Length=515 Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/516 (76%), Positives = 434/516 (85%), Gaps = 3/516 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGF IQT+AGSILCDPWVNPAYF SWFPFPDN+ LDW ALG+CDYLYVSHLH Sbjct 1 MQVTSVGHAGFHIQTEAGSILCDPWVNPAYFGSWFPFPDNTQLDWDALGKCDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFD ENL HV+KDA VLLPD+PVPDLR EL+ LGFH+FFET DSVKH + GP GDLD Sbjct 61 KDHFDPENLAKHVDKDATVLLPDYPVPDLRRELEALGFHKFFETEDSVKHTVSGPKGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 +MIIALRAPADGPIGDS LVV+DGETT FNMNDARPVD+DVL FG ID+H+LQYSGAI Sbjct 121 IMIIALRAPADGPIGDSGLVVSDGETTCFNMNDARPVDMDVLHDAFGKIDIHLLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYD+P + K FG QKRQR MDR R YI QV ATWVVPSAGPP FL LR+LNDD Sbjct 181 WYPMVYDIPTKTKANFGKQKRQRGMDRCRSYIEQVAATWVVPSAGPPVFLDDALRYLNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 D NIFPDQ+ FL+QMR HG DGG+LMIPGSTAD G L +L HP+P +V+ IF + Sbjct 241 RGDEGNIFPDQITFLEQMRIHGNDGGILMIPGSTADLKGGEL-TLTHPIPDAEVDEIF-S 298 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 DKAAYI D A RMAPVLAA+KA WA A GEPLL+ L+ FEPIM QS+ ICDGIGYPV L Sbjct 299 DKAAYIEDMAQRMAPVLAAEKATWAPAEGEPLLEALKAKFEPIMKQSDLICDGIGYPVGL 358 Query 361 AIGPETIVLDFPKRAVR-EPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRA 419 +G ET+VLDFP R VR D ++RYGF IAPELVRTVLRD+EPDWVNTIFLSTRF A Sbjct 359 VMGDETVVLDFPARTVRPRGEKDGKYRYGFRIAPELVRTVLRDDEPDWVNTIFLSTRFEA 418 Query 420 WRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKF 479 WRVGGYNE+LYTFFKCLTDERIAYADGWFAEAHDDS+SI L G+EIQRRCPHLKADLSKF Sbjct 419 WRVGGYNEFLYTFFKCLTDERIAYADGWFAEAHDDSASIELGGYEIQRRCPHLKADLSKF 478 Query 480 GVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 GVV+G LTCNLHGWQW L+ GRC T++GH+LRSS+ Sbjct 479 GVVDGTNLTCNLHGWQWDLESGRCKTSKGHELRSSK 514 >gi|325675625|ref|ZP_08155309.1| Rieske 2Fe-2S family protein [Rhodococcus equi ATCC 33707] gi|325553596|gb|EGD23274.1| Rieske 2Fe-2S family protein [Rhodococcus equi ATCC 33707] Length=516 Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/516 (76%), Positives = 432/516 (84%), Gaps = 3/516 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +Q+TSVGHAGF IQT+AGSILCDPWVNPAYFASWFPFPDN+GLDW ALG+ DYLYVSHLH Sbjct 1 MQITSVGHAGFHIQTEAGSILCDPWVNPAYFASWFPFPDNTGLDWDALGDVDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFD E L AHVNKDA VLLPD+PVPDL EL+KLGF +FFET DSVKH + GP GDLD Sbjct 61 KDHFDPETLAAHVNKDATVLLPDYPVPDLERELRKLGFTKFFETQDSVKHTVSGPKGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 +MIIALRAPADGPIGDS LVV+DGET FNMNDARPVD+D + FG ID+H+LQYSGAI Sbjct 121 IMIIALRAPADGPIGDSGLVVSDGETVCFNMNDARPVDMDPMLEAFGKIDIHLLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYD+PA K FG QKRQR MDR R YI QVGATWVVPSAGPP FL LR LNDD Sbjct 181 WYPMVYDIPAGTKRNFGKQKRQRGMDRCRSYIEQVGATWVVPSAGPPVFLDDALRSLNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 D NIFPDQ+VFL+QM+ HG DGGLLMIPGST D G +L HP+P VE IF T Sbjct 241 HGDEGNIFPDQIVFLEQMKIHGNDGGLLMIPGSTVDIHGEKA-TLAHPIPDADVEKIF-T 298 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 DKAAYI D A RMAPV+AA+KA WA A GEPLL PL+ FEPIM QS+ ICDGIGYPV L Sbjct 299 DKAAYIEDMAQRMAPVIAAEKASWAPAEGEPLLGPLKAKFEPIMAQSDVICDGIGYPVGL 358 Query 361 AIGPETIVLDFPKRAVREPIP-DERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRA 419 +G ET+VLDFP R VREP D ++RYGF IAPELVRTVLRD+EPDWVNTIFLSTRF A Sbjct 359 VMGDETVVLDFPNRTVREPQEGDGKYRYGFRIAPELVRTVLRDDEPDWVNTIFLSTRFEA 418 Query 420 WRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKF 479 WRVGGYNE+LYTFFKCLTDERIAYADGWFAEAHDD++SI + G+EIQRRCPHLKADLSKF Sbjct 419 WRVGGYNEFLYTFFKCLTDERIAYADGWFAEAHDDTASIEVGGYEIQRRCPHLKADLSKF 478 Query 480 GVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 GVVEG+ LTCNLHGWQW L+ GRC T++GH+LRS + Sbjct 479 GVVEGSNLTCNLHGWQWDLETGRCKTSKGHELRSKK 514 >gi|312140736|ref|YP_004008072.1| iron-sulfur binding oxidoreductase [Rhodococcus equi 103S] gi|311890075|emb|CBH49393.1| iron-sulfur binding oxidoreductase [Rhodococcus equi 103S] Length=516 Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/516 (76%), Positives = 432/516 (84%), Gaps = 3/516 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +Q+TSVGHAGF IQT+AGSILCDPWVNPAYFASWFPFPDN+GLDW ALG+ DYLYVSHLH Sbjct 1 MQITSVGHAGFHIQTEAGSILCDPWVNPAYFASWFPFPDNTGLDWDALGDVDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFD E L AHVNKDA VLLPD+PVPDL EL+KLGF +FFET DSVKH + GP GDLD Sbjct 61 KDHFDPETLAAHVNKDATVLLPDYPVPDLERELRKLGFTKFFETEDSVKHTVSGPKGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 +MIIALRAPADGPIGDS LVV+DGET FNMNDARPVD+D + FG ID+H+LQYSGAI Sbjct 121 IMIIALRAPADGPIGDSGLVVSDGETVCFNMNDARPVDMDPMLEAFGKIDIHLLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYD+PA K FG QKRQR MDR R YI QVGATWVVPSAGPP FL LR LNDD Sbjct 181 WYPMVYDIPAGTKRNFGKQKRQRGMDRCRSYIEQVGATWVVPSAGPPVFLDDALRSLNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 D NIFPDQ+VFL+QM+ HG DGGLLMIPGST D G +L HP+P VE IF T Sbjct 241 HGDEGNIFPDQIVFLEQMKIHGNDGGLLMIPGSTVDIHGEKA-TLAHPIPDADVEKIF-T 298 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 DKAAYI D A RMAPV+AA+KA WA A GEPLL PL+ FEPIM QS+ ICDGIGYPV L Sbjct 299 DKAAYIEDMAQRMAPVIAAEKASWAPAEGEPLLGPLKAKFEPIMAQSDVICDGIGYPVGL 358 Query 361 AIGPETIVLDFPKRAVREPIP-DERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRA 419 +G ET+VLDFP R VREP D ++RYGF IAPELVRTVLRD+EPDWVNTIFLSTRF A Sbjct 359 VMGDETVVLDFPNRTVREPQEGDGKYRYGFRIAPELVRTVLRDDEPDWVNTIFLSTRFEA 418 Query 420 WRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKF 479 WRVGGYNE+LYTFFKCLTDERIAYADGWFAEAHDD++SI + G+EIQRRCPHLKADLSKF Sbjct 419 WRVGGYNEFLYTFFKCLTDERIAYADGWFAEAHDDTASIEVGGYEIQRRCPHLKADLSKF 478 Query 480 GVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 GVVEG+ LTCNLHGWQW L+ GRC T++GH+LRS + Sbjct 479 GVVEGSNLTCNLHGWQWDLETGRCKTSKGHELRSKK 514 >gi|226309188|ref|YP_002769148.1| hypothetical protein RER_57010 [Rhodococcus erythropolis PR4] gi|229491548|ref|ZP_04385369.1| rieske [2Fe-2S] domain protein [Rhodococcus erythropolis SK121] gi|226188305|dbj|BAH36409.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] gi|229321229|gb|EEN87029.1| rieske [2Fe-2S] domain protein [Rhodococcus erythropolis SK121] Length=517 Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/516 (74%), Positives = 429/516 (84%), Gaps = 2/516 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +Q+TSVGHAGF IQT+AGSILCDPWV P YFASW PFPDN+ LDW ALG CDYLYVSHLH Sbjct 1 MQITSVGHAGFHIQTEAGSILCDPWVTPTYFASWVPFPDNTELDWDALGNCDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFD +NL AHVNKDA VLLPD+PVPDL+ EL+KLGFH+FFET DSVKH + GP GDLD Sbjct 61 KDHFDPKNLIAHVNKDATVLLPDYPVPDLKRELEKLGFHKFFETEDSVKHTVSGPKGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 +MIIALRAPADGPIGDS LVV+DGETT FNMNDARPVDLD L FG +D+H+LQYSGAI Sbjct 121 IMIIALRAPADGPIGDSGLVVSDGETTCFNMNDARPVDLDPLTDAFGKVDIHLLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYD+P K FG QKRQR MDR R YI+QV A WVVPSAGPP FL +LR+LNDD Sbjct 181 WYPMVYDIPKGTKRNFGKQKRQRGMDRCRNYISQVDAAWVVPSAGPPVFLDDDLRYLNDD 240 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 D NIFPDQ+ FL+QMR +G D GLLMIPGS + G+ +L HP+P V+ IF + Sbjct 241 HGDEGNIFPDQITFLEQMRINGNDRGLLMIPGSAVELRGSEKVALTHPIPDADVDKIF-S 299 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 +KA YI A +MAPV+AAQKA WA A GEPLL L+ FEPIM QS+ ICDGIGYPV L Sbjct 300 NKAEYIEKMAQKMAPVIAAQKATWAPAEGEPLLDGLKAKFEPIMAQSDLICDGIGYPVGL 359 Query 361 AIGPETIVLDFPKRAVREPIPDE-RFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRA 419 +G ET+VLDFPKR VREPI E ++RYGF IAPELVRTVLRD+EPDWVNTIFLSTRF A Sbjct 360 VMGEETVVLDFPKRIVREPIDGEGKYRYGFRIAPELVRTVLRDDEPDWVNTIFLSTRFTA 419 Query 420 WRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKF 479 WR+GGYNE+LYTFFKCLTDERIAYADGWFAEAHDDS+SI L G+EIQRRCPHLKADLSKF Sbjct 420 WRIGGYNEFLYTFFKCLTDERIAYADGWFAEAHDDSASIELGGYEIQRRCPHLKADLSKF 479 Query 480 GVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 GVV+G LTC+LHGWQW L+ GRC T++GH+LR+S+ Sbjct 480 GVVDGTNLTCDLHGWQWDLETGRCKTSKGHELRTSK 515 >gi|296137906|ref|YP_003645149.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Tsukamurella paurometabola DSM 20162] gi|296026040|gb|ADG76810.1| Rieske (2Fe-2S) iron-sulfur domain protein [Tsukamurella paurometabola DSM 20162] Length=525 Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/524 (72%), Positives = 426/524 (82%), Gaps = 10/524 (1%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGF I T AG+ILCDPWVNPAYF SWFPFPDN+ LDW ALG+ DYLYVSHLH Sbjct 1 MQVTSVGHAGFHITTTAGTILCDPWVNPAYFGSWFPFPDNTQLDWKALGDVDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 +DHFDA+NL ++NKDA VLLPD+PVPDL+ EL+KLGF RFFET DSVKH + GP GDLD Sbjct 61 RDHFDAKNLAENINKDATVLLPDYPVPDLKRELEKLGFTRFFETEDSVKHTVSGPKGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 +MIIALRAPADGPIGDS +VVADGET FNMNDARPVD+DVL FGHIDVH+LQYSGAI Sbjct 121 IMIIALRAPADGPIGDSGIVVADGETVLFNMNDARPVDMDVLGDNFGHIDVHLLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYDMP +K F QKRQR MDRAR Y+ QVGATWVVPSAGPP FL PELR+LND+ Sbjct 181 WYPMVYDMPKGSKRRFAEQKRQRGMDRARSYVDQVGATWVVPSAGPPAFLDPELRYLNDE 240 Query 241 G--------SDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAE 292 G DP+NIFPDQ+ FL++M +G DGGLLMIPG+ DF GT + SL HP+P Sbjct 241 GRTGEETVLGDPSNIFPDQITFLEEMSKNGNDGGLLMIPGTVGDFRGTEMLSLTHPVPEA 300 Query 293 QVEAIFTTDKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICD 352 +V IF +K AY+ +A+R APVLAA+KA WA G PLL L+ FEPIM S I D Sbjct 301 EVMEIF-ENKTAYLDAFAERQAPVLAAEKASWAPDDGVPLLGALKAKFEPIMQASALISD 359 Query 353 GIGYPVELAIGPETIVLDFPKRAVREPIP-DERFRYGFAIAPELVRTVLRDNEPDWVNTI 411 GIGY V L +G ET+VLDFP R VREP D ++RYGF IAPELVRTVLRD+EPDWVNTI Sbjct 360 GIGYAVGLEMGDETVVLDFPNRIVREPAEGDGKYRYGFRIAPELVRTVLRDDEPDWVNTI 419 Query 412 FLSTRFRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPH 471 FLSTRF WR+GGYNE+LYTFFKCLT ERIAYADGWF+EAHDDS+S L+GWE+QRRCPH Sbjct 420 FLSTRFTTWRIGGYNEFLYTFFKCLTPERIAYADGWFSEAHDDSASTELDGWEVQRRCPH 479 Query 472 LKADLSKFGVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 LKADLSKFGVVEG LTCNLHGWQW L+ GRCLT+ GH+LR+ R Sbjct 480 LKADLSKFGVVEGGKLTCNLHGWQWDLESGRCLTSSGHELRAKR 523 >gi|343926257|ref|ZP_08765766.1| hypothetical protein GOALK_056_01250 [Gordonia alkanivorans NBRC 16433] gi|343763886|dbj|GAA12692.1| hypothetical protein GOALK_056_01250 [Gordonia alkanivorans NBRC 16433] Length=533 Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/534 (71%), Positives = 422/534 (80%), Gaps = 22/534 (4%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +Q+TS+GHAGF IQT AGSILCDPWVNP YFASW PFPDNS LDW LG+CDYLYVSHLH Sbjct 1 MQITSIGHAGFHIQTNAGSILCDPWVNPTYFASWVPFPDNSELDWKTLGDCDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 +DHFD +NLR +VNKDA VLLPD+PVPDLR EL+KLGF +F ETTDSVK + G LD Sbjct 61 RDHFDEKNLRENVNKDATVLLPDYPVPDLRGELEKLGFTKFVETTDSVKTTVTNDKGSLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDS LVV+DGET FNMNDARP+DLDV+ FGH+DVH+LQYSGAI Sbjct 121 VMIIALRAPADGPIGDSGLVVSDGETVCFNMNDARPIDLDVIDDAFGHVDVHLLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYD+P ++K F +QKRQR MDRAR YI QVGATWVVPSAGPP FL +L HLND Sbjct 181 WYPMVYDIPRKSKANFASQKRQRGMDRARSYIEQVGATWVVPSAGPPMFLDEDLFHLNDF 240 Query 241 GS----DPANIFPDQMVFLDQMRAHGQDG-----GLLMIPGSTADFTGTTLNSLRHPLPA 291 GS D +IFPDQ FL+QMR HG D GL+M+ GS ADFTG+TLN + HP Sbjct 241 GSADTADDTSIFPDQETFLEQMRIHGTDDGEKHRGLMMVSGSVADFTGSTLNEVSHPYAP 300 Query 292 EQVEAIFTTDKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEIC 351 V F +K AY+ ++ APV+AA KA WA A GEPL+ LR LFEPIM QS+ IC Sbjct 301 GDV---FGENKRAYLERMKEKFAPVIAADKATWAPAEGEPLIGALRELFEPIMAQSDLIC 357 Query 352 DGIGYPVELAIGP---------ETIVLDFPKRAVREPIPDE-RFRYGFAIAPELVRTVLR 401 DGIGYPV L + P ET+VLDFP R VREP E ++RYGF IA ELVRTVLR Sbjct 358 DGIGYPVGLVMTPGGGPANDATETVVLDFPNRIVREPKEGEGKYRYGFRIATELVRTVLR 417 Query 402 DNEPDWVNTIFLSTRFRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLN 461 DNEPDWVNTIFLSTRF WR+GGYNE+LYTFFKCLTDERIAYADGWFAEAHDDS+SIT + Sbjct 418 DNEPDWVNTIFLSTRFTTWRIGGYNEFLYTFFKCLTDERIAYADGWFAEAHDDSASITKD 477 Query 462 GWEIQRRCPHLKADLSKFGVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 GWEIQRRCPHLKADL KFGV+EG LTCNLHGWQW L GRCLT++GH+LR+S+ Sbjct 478 GWEIQRRCPHLKADLGKFGVIEGEKLTCNLHGWQWDLASGRCLTSKGHELRASK 531 >gi|326384318|ref|ZP_08205999.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326196916|gb|EGD54109.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length=525 Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/525 (71%), Positives = 419/525 (80%), Gaps = 13/525 (2%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +Q+TS+GHAGF IQT AGSILCDPWVNPAYFASW PFPDNS LDW LG+CDYLYVSHLH Sbjct 1 MQITSIGHAGFHIQTAAGSILCDPWVNPAYFASWVPFPDNSELDWKTLGDCDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 +DH+D +NL +VNKDA VLLPD+PVPDLR EL++LGF +F ET DS KH + GP GDLD Sbjct 61 RDHYDEQNLLDNVNKDATVLLPDYPVPDLRRELERLGFSKFVETDDSKKHTVSGPKGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDS L+V DGET FNMNDARP+DLDV+ EFG +DVH+LQYSGAI Sbjct 121 VMIIALRAPADGPIGDSGLIVDDGETVCFNMNDARPIDLDVVTEEFGRVDVHLLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLND- 239 WYPMVYD+P ++K F QKRQR MDRAR YI QVGATWVVPSAGPP FL +L LND Sbjct 181 WYPMVYDIPRKSKANFAMQKRQRGMDRARSYIEQVGATWVVPSAGPPMFLDDDLFVLNDF 240 Query 240 ---DGSDPANIFPDQMVFLDQMRAHGQDG-----GLLMIPGSTADFTGTTLNSLRHPLPA 291 +D A+IFPDQ FL+QMR HG D GL+M+ GS ADF G L + HP P Sbjct 241 NTGSDADKASIFPDQAEFLEQMRVHGTDDGVKHRGLMMVSGSVADFAGAELREIGHPYPP 300 Query 292 EQVEAIFTTDKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEIC 351 E V F +K AY+ ++ APV+AAQKA WAA G LL+PLR FEPIM QS+ IC Sbjct 301 ETV---FGENKKAYLESMKEKFAPVIAAQKATWAAPDGPSLLEPLRGKFEPIMKQSDLIC 357 Query 352 DGIGYPVELAIGPETIVLDFPKRAVR-EPIPDERFRYGFAIAPELVRTVLRDNEPDWVNT 410 DGIGYPV L +G +T VLDFPKR VR D ++RYGF IAPELVRTVLRD+EPDWVNT Sbjct 358 DGIGYPVGLVVGDDTYVLDFPKRTVRMREEGDGKYRYGFRIAPELVRTVLRDDEPDWVNT 417 Query 411 IFLSTRFRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCP 470 IFLSTRF WR+GGYNEYLYTFFKCLTDERIAYADGWF+EAHDDS+SI L+GWEIQRRCP Sbjct 418 IFLSTRFTTWRIGGYNEYLYTFFKCLTDERIAYADGWFSEAHDDSASIELDGWEIQRRCP 477 Query 471 HLKADLSKFGVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 HLKADLSKFGV+EG LTCNLHGWQW L+ GRCLT++GH+LR+ R Sbjct 478 HLKADLSKFGVIEGQKLTCNLHGWQWDLESGRCLTSKGHELRAQR 522 >gi|262200221|ref|YP_003271429.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Gordonia bronchialis DSM 43247] gi|262083568|gb|ACY19536.1| Rieske (2Fe-2S) iron-sulphur domain protein [Gordonia bronchialis DSM 43247] Length=548 Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/548 (67%), Positives = 415/548 (76%), Gaps = 36/548 (6%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +Q+TS+GHAGF IQT AGSILCDPWVNP YFASW PFPDNS LDW ALG+CDYLYVSHLH Sbjct 1 MQITSIGHAGFHIQTAAGSILCDPWVNPTYFASWVPFPDNSELDWKALGQCDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 +DHFD NLR +V+KDA VLLPD+PVPDL+ EL+KLGF +F ET DS K + G G LD Sbjct 61 RDHFDERNLRENVSKDATVLLPDYPVPDLKRELEKLGFTKFVETVDSEKITVTGDKGSLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDS L+V+DGET FNMNDARP+DLDV+ FG +DVH+LQYSGAI Sbjct 121 VMIIALRAPADGPIGDSGLIVSDGETVCFNMNDARPIDLDVIDEAFGRVDVHLLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVYD+P ++K F AQKRQR MDRAR YI QVGATWVVPSAGPP FL +L LND Sbjct 181 WYPMVYDIPRKSKANFAAQKRQRGMDRARSYIEQVGATWVVPSAGPPMFLDDDLFGLNDF 240 Query 241 GS----------------DPANIFPDQMVFLDQMRAHGQDG-----GLLMIPGSTADFTG 279 GS D +IFPDQ FL+QMR HG D GL+M+ GS ADFTG Sbjct 241 GSIDAGSEASGSAPRWTADETSIFPDQETFLEQMRIHGTDDGEKHRGLMMVSGSVADFTG 300 Query 280 TTLNSLRHPLPAEQVEAIFTTDKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTL 339 +TLN + HP V F +K AY+ ++ APV+AA KA WA A GEPL+ LR L Sbjct 301 STLNEVSHPFAPHDV---FGENKRAYLEQMKEKFAPVIAADKATWAQAEGEPLIGQLREL 357 Query 340 FEPIMLQSNEICDGIGYPVELAIGP-----------ETIVLDFPKRAVREPIPDE-RFRY 387 FEPIM S+ ICDGIGYPV L + P E +V+DFP R VREP E ++RY Sbjct 358 FEPIMAASDLICDGIGYPVGLVMTPHSSGKETTEETEIVVIDFPNRIVREPKEGEGKYRY 417 Query 388 GFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAWRVGGYNEYLYTFFKCLTDERIAYADGW 447 GF I ELVRTVLRDNEPDWVNTIFLSTRF WR+GGYNEYLYTFFKCLTDERIAYADGW Sbjct 418 GFRIPTELVRTVLRDNEPDWVNTIFLSTRFTTWRIGGYNEYLYTFFKCLTDERIAYADGW 477 Query 448 FAEAHDDSSSITLNGWEIQRRCPHLKADLSKFGVVEGNTLTCNLHGWQWRLDDGRCLTAR 507 F+EAHDDS+SIT +GWEIQRRCPHLKADL KFGV+EG LTCNLHGWQW L GRCLT++ Sbjct 478 FSEAHDDSASITKDGWEIQRRCPHLKADLGKFGVIEGEKLTCNLHGWQWDLPTGRCLTSK 537 Query 508 GHQLRSSR 515 GH+LR+ R Sbjct 538 GHELRAER 545 >gi|339300224|gb|AEJ52334.1| hypothetical protein CCDC5180_3497 [Mycobacterium tuberculosis CCDC5180] Length=265 Score = 551 bits (1419), Expect = 1e-154, Method: Compositional matrix adjust. Identities = 265/265 (100%), Positives = 265/265 (100%), Gaps = 0/265 (0%) Query 252 MVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTTDKAAYIADYAD 311 MVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTTDKAAYIADYAD Sbjct 1 MVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTTDKAAYIADYAD 60 Query 312 RMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVELAIGPETIVLDF 371 RMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVELAIGPETIVLDF Sbjct 61 RMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVELAIGPETIVLDF 120 Query 372 PKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAWRVGGYNEYLYT 431 PKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAWRVGGYNEYLYT Sbjct 121 PKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAWRVGGYNEYLYT 180 Query 432 FFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFGVVEGNTLTCNL 491 FFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFGVVEGNTLTCNL Sbjct 181 FFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFGVVEGNTLTCNL 240 Query 492 HGWQWRLDDGRCLTARGHQLRSSRP 516 HGWQWRLDDGRCLTARGHQLRSSRP Sbjct 241 HGWQWRLDDGRCLTARGHQLRSSRP 265 >gi|302865914|ref|YP_003834551.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|315502470|ref|YP_004081357.1| rieske (2fe-2S) iron-sulfur domain-containing protein [Micromonospora sp. L5] gi|302568773|gb|ADL44975.1| Rieske (2Fe-2S) iron-sulphur domain [Micromonospora aurantiaca ATCC 27029] gi|315409089|gb|ADU07206.1| Rieske (2Fe-2S) iron-sulfur domain protein [Micromonospora sp. L5] Length=526 Score = 517 bits (1332), Expect = 2e-144, Method: Compositional matrix adjust. Identities = 263/523 (51%), Positives = 344/523 (66%), Gaps = 19/523 (3%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 ++VT GHA I T AGSILCDPWVNPAYFASWFPFPDNS LDW LG+ DYLYVSHLH Sbjct 1 MRVTGTGHASMRIDTAAGSILCDPWVNPAYFASWFPFPDNSLLDWATLGQVDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 +DHFDA++LR V+KDA VLLP+FP ++ +E ++LGF +F + + L G L Sbjct 61 RDHFDAKHLRDFVSKDATVLLPEFPTSEMEDEFRELGFTKFLKAPNEQVVEL---PGGLK 117 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 +MI AL +P DGPIGDS+L V N NDARP DL V A E GH+ HMLQ+SGAI Sbjct 118 IMIQALTSPTDGPIGDSSLWVEYDGVRLLNQNDARPTDLSVFA-ELGHVHAHMLQFSGAI 176 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVY++P AK AFG QKR RQ DR +YI + A V P AGPPCFL EL ND Sbjct 177 WYPMVYELPQAAKTAFGKQKRDRQFDRTWRYIDDLKADHVFPIAGPPCFLDDELWQFNDI 236 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 D NIFPDQ VFL + G G++++PGS ++ T T + HP+P E+ F Sbjct 237 FGDEGNIFPDQSVFLAEYAKVGGTNGIVLLPGSVSEIT-TEGATTTHPVPVEE----FFA 291 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 +K A++ + +R V+ A+KA W + +L ++ EP++ +S + G+G PV Sbjct 292 NKVAHLEEMRERKRGVIEAEKASWRHPEVD-VLGEMKRRIEPLLDESIYLAKGVGGPVRF 350 Query 361 AI------GPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLS 414 + E+IV+DFP + VR P DE+ RY F L+ +L E DWVN++FLS Sbjct 351 DLVGYDGESVESIVVDFPGKEVR-PYADEKVRYRFRTERALIEHLLHIGEVDWVNSLFLS 409 Query 415 TRFRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHD--DSSSITLNGWEIQRRCPHL 472 RF A R+G YNE++Y FFKCL++ER+ YA+GW+ E D+ ITL+GW +QRRCPHL Sbjct 410 CRFSAARIGQYNEFVYAFFKCLSEERLQYAEGWYDEHERAVDAEDITLDGWVVQRRCPHL 469 Query 473 KADLSKFGVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 KADLS+FG+V+G+ LTC LHGW++ L GRCLT+ GH++R+ R Sbjct 470 KADLSRFGIVDGDQLTCQLHGWKFDLASGRCLTSVGHKIRAHR 512 >gi|330466312|ref|YP_004404055.1| rieske (2fe-2S) iron-sulfur domain-containing protein [Verrucosispora maris AB-18-032] gi|328809283|gb|AEB43455.1| rieske (2fe-2S) iron-sulfur domain protein [Verrucosispora maris AB-18-032] Length=522 Score = 514 bits (1325), Expect = 1e-143, Method: Compositional matrix adjust. Identities = 261/521 (51%), Positives = 341/521 (66%), Gaps = 19/521 (3%) Query 3 VTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLHKD 62 +T GHA I T AGSILCDPWVNPAYFASWFPFPDNS LDW LG+ DYLYVSHLH+D Sbjct 1 MTGTGHASMRIDTGAGSILCDPWVNPAYFASWFPFPDNSLLDWETLGDVDYLYVSHLHRD 60 Query 63 HFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLDVM 122 HFDA +L+ +V+K A VLLP+FP ++ +E + LGF +F +T + L +G L +M Sbjct 61 HFDAAHLKRYVSKKATVLLPEFPTSEMEDEFRALGFTKFLKTRNEEVVEL---DGGLKIM 117 Query 123 IIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAIWY 182 I AL +P DGPIGDS+L V N NDARP DL A E GH+ HMLQ+SGAIWY Sbjct 118 IQALTSPTDGPIGDSSLWVEYDGVRLLNQNDARPTDLSTFA-ELGHVHAHMLQFSGAIWY 176 Query 183 PMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDDGS 242 PMVY++P AK AFG QKR RQ DR +YI + A V P AGPPCFL EL ND Sbjct 177 PMVYELPQSAKTAFGKQKRDRQFDRTWRYIDDLKADHVFPIAGPPCFLDDELWQFNDIFG 236 Query 243 DPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTTDK 302 D NIFPDQ VFL + G G++++PGS ++ T T+ + HP+P E+ F +K Sbjct 237 DEGNIFPDQSVFLAEYAKVGGTNGIVLLPGSVSEIT-TSGATTTHPVPVEE----FFANK 291 Query 303 AAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVELAI 362 A++ + +R P++ A+KA W + +L+ L+ EP++ +S + G+G PV + Sbjct 292 VAHLEEMRERKRPIIEAEKASWRHPEID-VLKELKQRIEPLLDESIYLAKGVGGPVRFDL 350 Query 363 ------GPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTR 416 E+IV+DFP + VR P DE+ RY F LV +L E DWVN++FLS R Sbjct 351 VGYDGESIESIVVDFPGKQVR-PYADEKVRYRFRTERALVEHLLHIGEVDWVNSLFLSCR 409 Query 417 FRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHD--DSSSITLNGWEIQRRCPHLKA 474 F A R+G YNE++Y FFKCL+ ER+ YA+GW+ E D+ ITL W +QRRCPHLKA Sbjct 410 FSAARIGQYNEFVYAFFKCLSTERLQYAEGWYDEHERAVDAEDITLGDWVVQRRCPHLKA 469 Query 475 DLSKFGVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 DLS+FG+V+G+ LTC LHGW++ L GRCLT+ GH++R+ R Sbjct 470 DLSRFGIVDGDQLTCQLHGWRFDLPSGRCLTSVGHKVRAHR 510 >gi|159036882|ref|YP_001536135.1| Rieske (2Fe-2S) domain-containing protein [Salinispora arenicola CNS-205] gi|157915717|gb|ABV97144.1| Rieske (2Fe-2S) domain protein [Salinispora arenicola CNS-205] Length=529 Score = 513 bits (1320), Expect = 4e-143, Method: Compositional matrix adjust. Identities = 266/526 (51%), Positives = 338/526 (65%), Gaps = 22/526 (4%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 ++VT GHA I T AGSILCDPWVNPAYFASWFPFPDNS LDW LG+ DYLYVSHLH Sbjct 1 MRVTGTGHASMRIDTPAGSILCDPWVNPAYFASWFPFPDNSRLDWETLGDVDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 +DHFDA +L+ +V+K A VLLP FP ++ NEL++LGF RF + + L G L Sbjct 61 RDHFDAAHLKRYVSKRATVLLPAFPTSEMENELRELGFTRFLKAPNEEVVDL---GGGLR 117 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMI AL +P DGPIGDS+L V N NDARP DL V +E GH+ HMLQ+SGAI Sbjct 118 VMIQALTSPTDGPIGDSSLWVEHDGVRLLNQNDARPTDLSVF-TELGHVHAHMLQFSGAI 176 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVY++P AK AFG QKR+RQ DR +YI + A V P AGPPCFL L ND Sbjct 177 WYPMVYELPNAAKTAFGKQKRERQFDRTWRYINDLKADHVFPIAGPPCFLDDALWQFNDI 236 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 D NIFPDQ VFL + G G++++PGS A+ T + + HP+P A F Sbjct 237 HGDEGNIFPDQSVFLAEYAKVGGTNGVVLLPGSVAEVTASGCETT-HPVPV----AEFFA 291 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 DK A++ + +R PV+ A+KA W + +L +R EP++ +S + G+G PV Sbjct 292 DKVAHLEEMRERKRPVIEAEKASWRHPEVD-VLGEMRRRIEPLLEESIYLAKGVGGPVRF 350 Query 361 ---------AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTI 411 A E+IV+DFP R VR P DE+ RY F L+ +L E DWVN++ Sbjct 351 DLVDVDGSGAETVESIVVDFPGRQVR-PYADEKVRYRFRTERALIEHLLHVGEVDWVNSL 409 Query 412 FLSTRFRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHD--DSSSITLNGWEIQRRC 469 FLS RF A R+G YNE++Y FFKCL+ ER+ YA+GW+ E D+ ITL W +QRRC Sbjct 410 FLSCRFSAARIGQYNEFVYAFFKCLSQERLQYAEGWYDEHERAVDAEDITLGDWVVQRRC 469 Query 470 PHLKADLSKFGVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 PHLKADLS+FG+V + LTC LHGW++ L GRCLT+ GH++R+ R Sbjct 470 PHLKADLSRFGIVADDQLTCQLHGWRFDLASGRCLTSVGHKIRAER 515 >gi|145593881|ref|YP_001158178.1| Rieske (2Fe-2S) domain-containing protein [Salinispora tropica CNB-440] gi|145303218|gb|ABP53800.1| Rieske (2Fe-2S) domain protein [Salinispora tropica CNB-440] Length=529 Score = 511 bits (1317), Expect = 9e-143, Method: Compositional matrix adjust. Identities = 265/526 (51%), Positives = 341/526 (65%), Gaps = 22/526 (4%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 ++VT GHA I T AGSILCDPWVNPAYFASWFPFPDNS LDW ALG+ DYLYVSHLH Sbjct 1 MRVTGTGHASMRIDTPAGSILCDPWVNPAYFASWFPFPDNSQLDWAALGDVDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 +DHFDA +L+ +V+K A VLLP FP ++ NEL++LGF RF + + L G L Sbjct 61 RDHFDAAHLKRYVSKRATVLLPAFPTSEMENELRELGFTRFLKAPNEEVVDL---GGGLK 117 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMI AL +P DGPIGDS+L V N NDARP DL V +E GH+ HMLQ+SGAI Sbjct 118 VMIQALTSPTDGPIGDSSLWVEHDGVRLLNQNDARPTDLSVF-TELGHVHAHMLQFSGAI 176 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVY++P AK AFG QKR+RQ DR +YI + A V P AGPPCFL L ND Sbjct 177 WYPMVYELPNAAKTAFGKQKRERQFDRTWRYIDDLKADHVFPIAGPPCFLDDALWQFNDI 236 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 D NIFPDQ VFL++ G G++++PGS A+ T + HP+P A F Sbjct 237 HGDEGNIFPDQSVFLEEYAKVGGTNGVVLLPGSVAEVTADGCETT-HPVPV----AEFFA 291 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 +K A++ + +R P++AA+KA W + +L ++ EP++ +S + G+G PV Sbjct 292 NKVAHLEEMRERKRPIIAAEKASWRHPEID-VLGEMQRRIEPLLNESIYLAKGVGGPVRF 350 Query 361 AI------GPET---IVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTI 411 + G ET IV+DFP + VR P DE+ RY F L+ +L E DWVN++ Sbjct 351 DLVDGDDAGTETVESIVVDFPGKQVR-PYADEKVRYRFRTERALIEHLLHIGEVDWVNSL 409 Query 412 FLSTRFRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHD--DSSSITLNGWEIQRRC 469 FLS RF A R+G YNE++Y FFKCL+ ER+ YA+GW+ E D+ ITL W +QRRC Sbjct 410 FLSCRFSAARIGQYNEFVYAFFKCLSQERLQYAEGWYDEHERAVDAEDITLGDWVVQRRC 469 Query 470 PHLKADLSKFGVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 PHLKADLS+FG+V + LTC LHGW++ L GRCLT+ GH++R+ R Sbjct 470 PHLKADLSRFGIVADDQLTCQLHGWRFDLASGRCLTSVGHKIRAQR 515 >gi|238063331|ref|ZP_04608040.1| Rieske domain-containing protein [Micromonospora sp. ATCC 39149] gi|237885142|gb|EEP73970.1| Rieske domain-containing protein [Micromonospora sp. ATCC 39149] Length=523 Score = 508 bits (1309), Expect = 8e-142, Method: Compositional matrix adjust. Identities = 261/526 (50%), Positives = 339/526 (65%), Gaps = 22/526 (4%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 ++VT GHA I T GSILCDPWVNPAYFASWFPFPDNS LDW LG+ DYLYVSHLH Sbjct 1 MRVTGTGHASMRIDTAVGSILCDPWVNPAYFASWFPFPDNSQLDWETLGDVDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 +DHFDA +LR V+KDA VLLP+FP ++ +EL+ LGF +F + L +G L Sbjct 61 RDHFDAAHLRDFVSKDATVLLPEFPTSEMEDELRALGFTKFLRAPNEQVVEL---DGGLR 117 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 +MI AL +P DGPIGDS+L V N NDARP DL V A E GH+ H+LQ+SGAI Sbjct 118 IMIQALISPTDGPIGDSSLWVEYDGVRLLNQNDARPTDLSVFA-ELGHVHAHLLQFSGAI 176 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVY++P AK AFG QKR+RQ DR +YIA + A V P AGPPCFL L ND Sbjct 177 WYPMVYELPQSAKTAFGKQKRERQFDRTWRYIADLKADHVFPIAGPPCFLDDALWQFNDI 236 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 D NIFPDQ FL + G G++++PGS A+ T T+ + HP P E+ F Sbjct 237 HGDEGNIFPDQSAFLAEYAKVGGTNGIVLLPGSVAEVT-TSGATTTHPQPVEE----FFA 291 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 +K A++ + +R V+ A++A W + +L ++ EP++ +S + G+G PV Sbjct 292 NKVAHLEEMRERKRGVIEAERASWRHPEVD-VLAEMKRRIEPLLEESIYLAKGVGGPVRF 350 Query 361 AI---------GPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTI 411 + E+IV+DFP + VR P DE+ RY F LV +L E DWVN++ Sbjct 351 DLVGTDDSGGETVESIVVDFPGKEVR-PYADEKVRYRFRTERALVEHLLHIGEVDWVNSL 409 Query 412 FLSTRFRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAH--DDSSSITLNGWEIQRRC 469 FLS RF A R+G YNE++Y FFKCL+ ER+ YA+GW+ E D+ ITL W +QRRC Sbjct 410 FLSCRFSAARIGQYNEFVYAFFKCLSTERLQYAEGWYDEHERTSDAEDITLGDWVVQRRC 469 Query 470 PHLKADLSKFGVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 PHLKADL++FG+VEG+ LTC LHGW++ L GRCLT+ GH++R+ R Sbjct 470 PHLKADLTRFGIVEGDQLTCQLHGWKFDLPSGRCLTSVGHKVRAHR 515 >gi|291299712|ref|YP_003510990.1| Rieske (2Fe-2S) domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290568932|gb|ADD41897.1| Rieske (2Fe-2S) domain protein [Stackebrandtia nassauensis DSM 44728] Length=516 Score = 506 bits (1302), Expect = 4e-141, Method: Compositional matrix adjust. Identities = 253/524 (49%), Positives = 333/524 (64%), Gaps = 19/524 (3%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +++T GHA LI+T AG+IL DPWVNPAYFASWFPFPDNS LDW LG CD+LYVSHLH Sbjct 1 MRITGTGHASMLIETAAGTILTDPWVNPAYFASWFPFPDNSQLDWDTLGRCDFLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 +DHFD +NLR ++KD VLLP++P +L +EL+ LGF +F +T V + + Sbjct 61 RDHFDEQNLREKISKDTTVLLPEYPTSELEDELRALGFTKFIKT---VSGEVTEIGNGVK 117 Query 121 VMIIALRAPADGPIGDSALVVADGE-TTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGA 179 VMI AL +P DGPIGDS+L V D + N NDARP DL + G + H+LQ+SGA Sbjct 118 VMIQALTSPTDGPIGDSSLWVEDADGVRLLNQNDARPTDLSAFTA-LGDVHAHLLQFSGA 176 Query 180 IWYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLND 239 IWYPMVY++P AK AFG QKR+RQMDR+ +YI V A V P AGPPCFL L ND Sbjct 177 IWYPMVYELPETAKTAFGKQKRERQMDRSLRYIDDVKAAHVFPIAGPPCFLDDALWKFND 236 Query 240 DGSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFT 299 D NIFPDQ V+ D + +G D ++++PG+ A+ T T + P + V F Sbjct 237 IFGDEGNIFPDQQVYTDYLAQNGYDNSVILLPGTVAEVTQTGCTTTH---PVDDVREFFD 293 Query 300 TDKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVE 359 + IA Y DR PV+AA K W + + ++ FEP+M ++ I GI PV Sbjct 294 NKEEHLIA-YRDRQRPVIAAAKKSWEHPEID-VFAEVKARFEPLMEEAEFIAAGINGPVR 351 Query 360 LAI-------GPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIF 412 + E+++ DF R VR E+ RY F L+ +L E DWVN++F Sbjct 352 FDLLKPDSDEVAESVLFDFTNREVRR-YDGEKCRYRFKTERRLIEHLLHIEEIDWVNSLF 410 Query 413 LSTRFRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHL 472 LS RF A R+G YNE++YTFFKCL++ER+ YA+GW+AE D+ I L GW +QRRCPHL Sbjct 411 LSCRFSAARIGQYNEFVYTFFKCLSEERLNYAEGWYAEQKPDAEDINLQGWTVQRRCPHL 470 Query 473 KADLSKFGVVEGNTLTCNLHGWQWRLDDGRCLTARGHQ-LRSSR 515 KADLS+FG +E LTC +HGW+W L+ G+C+T+ G Q +RSS+ Sbjct 471 KADLSRFGKIEDGVLTCQMHGWKWNLESGKCVTSVGGQPIRSSK 514 >gi|302547851|ref|ZP_07300193.1| Rieske 2Fe-2S family protein [Streptomyces hygroscopicus ATCC 53653] gi|302465469|gb|EFL28562.1| Rieske 2Fe-2S family protein [Streptomyces himastatinicus ATCC 53653] Length=514 Score = 499 bits (1284), Expect = 7e-139, Method: Compositional matrix adjust. Identities = 260/519 (51%), Positives = 335/519 (65%), Gaps = 13/519 (2%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGE-CDYLYVSHL 59 +++T +GHAG I+T+AGS+LCDPWVNPA+F SWFPFPDN+ LDW G DYLYVSHL Sbjct 1 MRITGLGHAGLFIETEAGSVLCDPWVNPAFFGSWFPFPDNTDLDWAHYGRSADYLYVSHL 60 Query 60 HKDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDL 119 H+DHFDA+NLR +V KD VLLP F +L EL+ LGF RF T G L Sbjct 61 HRDHFDAQNLRRNVRKDITVLLPAFATDELERELRALGFTRFLRTESGKPVERDG----L 116 Query 120 DVMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGA 179 +MI AL P DGPIGDSAL + DG T N NDA P+D+ + + FG +D + +Q+SGA Sbjct 117 RIMITALTGPGDGPIGDSALSLDDGRTVLLNQNDAHPLDIPAIRA-FGEVDAYFVQFSGA 175 Query 180 IWYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLND 239 IWYPMVY +P AK F A+KRQ Q DRA +YI V A V P+AGPPCFL L N Sbjct 176 IWYPMVYQLPDSAKREFAARKRQGQFDRALRYIDAVEAAHVFPNAGPPCFLDDALFEFNG 235 Query 240 DGSDPANIFPDQMVFLDQMRAHGQDG--GLLMIPGSTADFTGTTLNSLRHPLPAEQVEAI 297 G D +IF DQ FL Q+ A + G L++PG+ A+ GT L H ++++ I Sbjct 236 TGRDGESIFTDQREFLAQL-AQERPGVSAHLLLPGTVAEPEGTACK-LTHRHTDKEIDHI 293 Query 298 FTTDKAAYIADYADRMAPVLAAQKAGWAAAA-GEPLLQPLRTLFEPIMLQSNEICDGIGY 356 F DK Y+ D+A R P LAA++A A A LL L+ +EP++ +++ IC G+G Sbjct 294 FG-DKRTYLRDFARRQRPALAAERASRAPALPRHRLLSELKRWWEPLLARADHICAGVGG 352 Query 357 PVELAIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTR 416 P L +G IV+DFP R VRE ER RY + +LV T + E DW N++ LS R Sbjct 353 PARLDVGEIPIVVDFPAREVRE-WNGERCRYTLSTTGDLVATNVAKREVDWSNSLLLSMR 411 Query 417 FRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADL 476 F A R+G YNE+LY FFKCL+ ERI Y + ++A DD I L+GW+IQRRCPHL+ADL Sbjct 412 FTASRIGPYNEFLYVFFKCLSMERIEYVENYYASGEDDGQDIELDGWQIQRRCPHLRADL 471 Query 477 SKFGVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 +FG +EG+ LTC LHGW++ L GRCLTA GH+LR++R Sbjct 472 GRFGKIEGDVLTCTLHGWRYDLTTGRCLTADGHELRATR 510 >gi|345012574|ref|YP_004814928.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Streptomyces violaceusniger Tu 4113] gi|344038923|gb|AEM84648.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Streptomyces violaceusniger Tu 4113] Length=518 Score = 496 bits (1278), Expect = 3e-138, Method: Compositional matrix adjust. Identities = 259/517 (51%), Positives = 330/517 (64%), Gaps = 11/517 (2%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGEC-DYLYVSHL 59 ++VT +GHAG I+T AGS+LCDPWVNPA+F SWFPFPDN+ LDW G DYLYVSHL Sbjct 1 MRVTGLGHAGLFIETAAGSVLCDPWVNPAFFGSWFPFPDNTDLDWAHYGRAADYLYVSHL 60 Query 60 HKDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDL 119 H+DHFDAENLR V+KD VLLP F +L EL LGF F T G L Sbjct 61 HRDHFDAENLRRSVHKDITVLLPAFATDELERELSALGFTNFLHTPAGTPVERDG----L 116 Query 120 DVMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGA 179 +MI AL P DGPIGDSAL + DGET N NDA P+D+ + EFG +D + +Q+SGA Sbjct 117 RIMITALTGPGDGPIGDSALSLDDGETVLLNQNDAHPLDIAAI-REFGEVDAYFVQFSGA 175 Query 180 IWYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLND 239 IWYPMVY +P AK F A+KRQ Q DRA +YI V A V P+AGPPCFL EL N Sbjct 176 IWYPMVYQLPDSAKKEFAARKRQGQFDRALRYIEAVEAKHVFPNAGPPCFLDDELFEHNG 235 Query 240 DGSDPANIFPDQMVFLDQM-RAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIF 298 G D +IF DQ+ FL Q+ RA + L++PG+ A+ T L H ++E IF Sbjct 236 TGRDGESIFVDQLEFLRQLGRARPEMRAHLLLPGTVAEPEDTACK-LTHRYTESEIEHIF 294 Query 299 TTDKAAYIADYADRMAPVLAAQKAGWAAAA-GEPLLQPLRTLFEPIMLQSNEICDGIGYP 357 +K AY+ ++A R VLAA++A A A E LL L+ +EP++ +++ IC G+G P Sbjct 295 G-EKRAYLREFARRQQSVLAAERASRAPALPRERLLAELKQWWEPLLTRADRICAGVGGP 353 Query 358 VELAIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRF 417 L +G IV+DFP R VR ER RY + + +LV T + E DW N++ LS RF Sbjct 354 ARLDVGEVPIVIDFPAREVR-LWDGERCRYTLSTSADLVATNIDRREVDWSNSLLLSLRF 412 Query 418 RAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLS 477 A R+G YNE+LY FFKCL+ ERI Y + ++ DD I L+GW +QRRCPHL+ADL Sbjct 413 TASRIGPYNEFLYVFFKCLSMERIEYVENYYDSCQDDGQDIVLDGWRVQRRCPHLRADLG 472 Query 478 KFGVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSS 514 +FG +EG LTC LHGW++ L GRCLT+ GH +R+S Sbjct 473 RFGQIEGEVLTCTLHGWRYDLTTGRCLTSDGHDIRAS 509 >gi|297162686|gb|ADI12398.1| 2Fe-2S cluster-containing protein [Streptomyces bingchenggensis BCW-1] Length=516 Score = 493 bits (1270), Expect = 3e-137, Method: Compositional matrix adjust. Identities = 256/518 (50%), Positives = 330/518 (64%), Gaps = 11/518 (2%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGEC-DYLYVSHL 59 ++VT +GHAG I+T AG++LCDPWVNPA+F SWFPFPDN+ LDW G DYLYVSHL Sbjct 1 MRVTGLGHAGLFIETAAGTVLCDPWVNPAFFGSWFPFPDNTDLDWDHYGRAADYLYVSHL 60 Query 60 HKDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDL 119 H+DHFDAENLR +V KD VLLP F +L EL+ LGF F T V G L Sbjct 61 HRDHFDAENLRRNVRKDLTVLLPAFATDELEFELRALGFSEFLRTESGVPVERDG----L 116 Query 120 DVMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGA 179 +MI AL P DGPIGDSAL + DGET N NDA P+D+ + + FG +D H LQ+SGA Sbjct 117 RIMITALTGPGDGPIGDSALSLDDGETVLLNQNDAHPLDIPSIRA-FGEVDAHFLQFSGA 175 Query 180 IWYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLND 239 IW+PMVY +P AK F A+KR+ Q +RA +YI V A V P+AGPPCFL +L N Sbjct 176 IWWPMVYQLPDTAKREFAARKREGQSERALRYIDAVEAKHVFPNAGPPCFLDEDLFQFNG 235 Query 240 DGSDPANIFPDQMVFLDQM-RAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIF 298 G D +IF DQ FL ++ A L++PG+ A+ T L H A++++ IF Sbjct 236 TGRDGESIFVDQREFLAELAEARPDTSAHLLLPGTVAEPLHTACK-LTHRYTAKEIDHIF 294 Query 299 TTDKAAYIADYADRMAPVLAAQKAGWAAAAG-EPLLQPLRTLFEPIMLQSNEICDGIGYP 357 K AY+ D+A R P LAA++A A E LL L+ +EP++ +++ ICDG+G P Sbjct 295 EQ-KDAYLRDFARRQQPALAAERASRAPVLPPERLLAELKQWWEPLLARADRICDGVGGP 353 Query 358 VELAIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRF 417 V L + IV+DFP R VR ER RY + +LV T + E DW N++ LS RF Sbjct 354 VRLDVDDTPIVIDFPARQVRR-WDGERCRYTLSTTGDLVATNIARREVDWSNSLLLSLRF 412 Query 418 RAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLS 477 RA R+G YNE+LY FFKCL+ ERI Y + ++ HDD + L W +QRRCPHL+ADL Sbjct 413 RASRIGPYNEFLYVFFKCLSSERIEYVENYYDSGHDDGQHVELGDWRVQRRCPHLRADLG 472 Query 478 KFGVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSR 515 +FG +EG+ LTC LHGW++ L GRCLTA GH +R+ R Sbjct 473 RFGQIEGDELTCTLHGWRYDLSTGRCLTADGHDIRAER 510 >gi|269839855|ref|YP_003324548.1| Rieske (2Fe-2S) domain protein [Thermobaculum terrenum ATCC BAA-798] gi|269791585|gb|ACZ43725.1| Rieske (2Fe-2S) domain protein [Thermobaculum terrenum ATCC BAA-798] Length=526 Score = 491 bits (1264), Expect = 1e-136, Method: Compositional matrix adjust. Identities = 264/506 (53%), Positives = 329/506 (66%), Gaps = 9/506 (1%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 ++VTS+GHAGF I+T+ G+IL DPW NPAYFASWFPFP N +D A+G DYLY+SH+H Sbjct 1 MRVTSIGHAGFFIETRHGTILTDPWFNPAYFASWFPFPSNEHIDPAAIGSPDYLYISHMH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 DH D E LR HV+KDAVVLLPD+P+ L EL+ +GF F T + L G L Sbjct 61 HDHMDPEFLRRHVSKDAVVLLPDYPLDLLERELRAMGFRHFVRTRNYEPVELDG----LR 116 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 +MI A AP DGP+GDSAL+V DGE + ND+RP+DL+ LAS FG D+HMLQ+SGAI Sbjct 117 IMIAAAVAPTDGPLGDSALMVDDGEVRILDQNDSRPLDLERLAS-FGPYDLHMLQFSGAI 175 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 WYPMVY +P + K+A G +KR MDRA +YI +GA WVVPSAGPPCFL +L LND Sbjct 176 WYPMVYKLPQKMKEALGRKKRINGMDRALRYIELLGARWVVPSAGPPCFLDDDLFGLNDF 235 Query 241 GSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFTT 300 DPAN FPD VFLD M HG GLL+IPGST + + + +L HP P ++V AIF Sbjct 236 DRDPANTFPDAAVFLDYMAEHGHGNGLLVIPGSTVEISPASC-TLTHPFPEDEVRAIF-E 293 Query 301 DKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPVEL 360 DK Y+ Y R P + A K+ W + L+ LR FEP++ Q++ C G+ V L Sbjct 294 DKRLYLEAYKARQQPRIDAIKSSWRRGEVD-LVAALREWFEPLLEQADMTCVGVNGRVLL 352 Query 361 AIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFRAW 420 G E IVLDF R V E + Y A L+ +R + DWVN +FLS RF A Sbjct 353 DCGDEGIVLDFQHRKVYR-WQGEEWEYRMAFDRALLEECVRQHYEDWVNELFLSCRFEAE 411 Query 421 RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSKFG 480 R G YNEY+Y FFKCL+ ER+ YA+GW+AE D G+ +QRRCPHLKADL++FG Sbjct 412 RKGPYNEYVYNFFKCLSQERLQYAEGWYAEQTQDQQLWECEGYLVQRRCPHLKADLTRFG 471 Query 481 VVEGNTLTCNLHGWQWRLDDGRCLTA 506 V LTC LHGWQ+ L GRCLT+ Sbjct 472 EVHDGILTCRLHGWQFDLATGRCLTS 497 >gi|339300223|gb|AEJ52333.1| hypothetical protein CCDC5180_3496 [Mycobacterium tuberculosis CCDC5180] Length=241 Score = 479 bits (1234), Expect = 4e-133, Method: Compositional matrix adjust. Identities = 231/233 (99%), Positives = 232/233 (99%), Gaps = 0/233 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH Sbjct 1 MQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD Sbjct 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI Sbjct 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPE 233 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAP Sbjct 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPR 233 >gi|256391380|ref|YP_003112944.1| Rieske (2Fe-2S) domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256357606|gb|ACU71103.1| Rieske (2Fe-2S) domain protein [Catenulispora acidiphila DSM 44928] Length=549 Score = 447 bits (1151), Expect = 2e-123, Method: Compositional matrix adjust. Identities = 237/524 (46%), Positives = 314/524 (60%), Gaps = 20/524 (3%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGL----DWGALGECDYLYV 56 +++TS+GHAG L++T AG I+CDPW PAYFASWFPFPDNS D + +YL+V Sbjct 1 MRITSIGHAGMLVETAAGRIVCDPWFTPAYFASWFPFPDNSAFGSAADPAGIRTAEYLFV 60 Query 57 SHLHKDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPN 116 SHLH DHFD L A+++KD VLLPD+ VPDLR+EL+KLGF F +T + L Sbjct 61 SHLHHDHFDPHWLSANMSKDTTVLLPDYQVPDLRDELEKLGFRNFMQTRNREVTEL---P 117 Query 117 GDLDVMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQY 176 G L ++I AL P DGP+GDS + + DGE FN NDARPV+ D + FG D H LQY Sbjct 118 GGLRILIDALITPTDGPLGDSGIAIDDGEVRIFNQNDARPVE-DGPVAAFGPYDAHFLQY 176 Query 177 SGAIWYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAP--EL 234 SGAIWYPMVYD P R K G +KR+ M RA +Y+ Q GA V P AGPPCFL L Sbjct 177 SGAIWYPMVYDFPERMKATVGRRKRENGMARALRYVEQYGAKQVFPFAGPPCFLDERDNL 236 Query 235 RHLNDDGSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQV 294 +ND DPAN+FP Q+ FL+ MR G D G L +PG+T G +P Q+ Sbjct 237 FAINDFDDDPANVFPSQLAFLEFMREQGHDNGHLFVPGTTV-VLGADGKCEMEQVPQAQI 295 Query 295 EAIFTTDKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGI 354 + I+ D+ Y+ +Y R P + A AG + L+ L+ EP++ ++ C G+ Sbjct 296 DEIYG-DRRTYLTNYQKRAQPQIDAMHAGLPQDKSD-LVGQLKEWIEPLLAWADHTCAGL 353 Query 355 GYPVELAIG-PET------IVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDW 407 + L P T IV DF R + + RY F L+ ++R PDW Sbjct 354 NGRILLETADPATGEVDDQIVFDFLTRTIGTWDGEAECRYKFRTDRPLIEHLVRTRTPDW 413 Query 408 VNTIFLSTRFRAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQR 467 VN +FLS RF+A R G YNEY+YTFFK L++E + Y +G++AE+ D + G+ +QR Sbjct 414 VNELFLSCRFQASRKGPYNEYIYTFFKSLSEEHMTYVEGYYAESSDVTDLAKAEGYAVQR 473 Query 468 RCPHLKADLSKFGVVEGNTLTCNLHGWQWRLDDGRCLTARGHQL 511 CPHLKADL++FG V LTC++HGWQ+ L GRCLT+ +L Sbjct 474 HCPHLKADLTRFGTVADGVLTCSMHGWQFDLASGRCLTSDDRKL 517 >gi|289747660|ref|ZP_06507038.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289688188|gb|EFD55676.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] Length=224 Score = 446 bits (1147), Expect = 5e-123, Method: Compositional matrix adjust. Identities = 215/216 (99%), Positives = 216/216 (100%), Gaps = 0/216 (0%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +QVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH Sbjct 1 MQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD Sbjct 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI Sbjct 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVG 216 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVG Sbjct 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVG 216 >gi|323359980|ref|YP_004226376.1| Zn-dependent hydrolase of the beta-lactamase fold [Microbacterium testaceum StLB037] gi|323276351|dbj|BAJ76496.1| predicted Zn-dependent hydrolase of the beta-lactamase fold [Microbacterium testaceum StLB037] Length=532 Score = 435 bits (1119), Expect = 9e-120, Method: Compositional matrix adjust. Identities = 224/516 (44%), Positives = 309/516 (60%), Gaps = 9/516 (1%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNPAYFASWFPFPDNSGLDWGALGECDYLYVSHLH 60 +++T +GHAG I+T GSILCDP + P++F SWFPFPDN LDW G+ D+LY+SH H Sbjct 1 MRITGLGHAGMFIETAGGSILCDPVIGPSFFGSWFPFPDNRALDWERFGKADFLYISHRH 60 Query 61 KDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDLD 120 +DHFD L +V KD VLLP++P DL +L LG+ T V + GDL Sbjct 61 RDHFDPAMLERYVPKDVKVLLPEYPTDDLEQDLVALGYTNLVRTEAGVPLQF----GDLK 116 Query 121 VMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYSGAI 180 +M+ LRAP+DGPIGDS+L + DG + N ND+ P+DL+ L +FG D + Q SGAI Sbjct 117 LMVTPLRAPSDGPIGDSSLSLDDGTASILNQNDSHPLDLEKLF-DFGKPDAYFTQVSGAI 175 Query 181 WYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHLNDD 240 W+PMVYD+P AK F KR Q RA YI +V A V P AGPP FL EL N Sbjct 176 WWPMVYDLPQDAKQNFAKLKRDAQNKRAMYYIEKVDAAHVFPMAGPPMFLREELFRYNGT 235 Query 241 GSDPANIFPDQMVFLDQMRAHGQD-GGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAIFT 299 G + +IF DQ FL M+ D G L +PG+ + G+ + + +++ +F Sbjct 236 GLENDSIFTDQREFLAHMKEQRPDQKGYLFLPGTEVEVQGSDVTVTQTLYTDAEIDRVFG 295 Query 300 TDKAAYIADYAD-RMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSNEICDGIGYPV 358 DK AY+A+ D R + V A + +L ++ +EP++ ++ I +G+G V Sbjct 296 -DKWAYLAEQRDSRQSEVRAEEATRAEILPPAEMLAAIKEWWEPLLRRARTIRNGVGGAV 354 Query 359 ELAIGPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTIFLSTRFR 418 IG +V+DFPK VRE +E Y + I +LV T +RD+E DW N+IFLS +F Sbjct 355 RFRIGELDMVVDFPKAKVREYAGEECI-YWYTIPADLVSTNIRDHEIDWSNSIFLSMQFE 413 Query 419 AWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNGWEIQRRCPHLKADLSK 478 R G +NE+L TF KCL+ +RI Y + W+AE D + ++GW +QRRCPHL+ADL+K Sbjct 414 VGRSGKFNEFLTTFLKCLSRDRIEYVENWYAEQSDQTEDAEIDGWTVQRRCPHLRADLTK 473 Query 479 FGVVEGNTLTCNLHGWQWRLDDGRCLTARGHQLRSS 514 G +E LTC+LH W+W L GRCLT GH +RS+ Sbjct 474 TGKIENGVLTCSLHDWKWDLATGRCLTTTGHPIRST 509 >gi|115378123|ref|ZP_01465299.1| rieske [2Fe-2S] domain protein [Stigmatella aurantiaca DW4/3-1] gi|310821262|ref|YP_003953620.1| rieske family iron-sulfur cluster-binding protein [Stigmatella aurantiaca DW4/3-1] gi|115364865|gb|EAU63924.1| rieske [2Fe-2S] domain protein [Stigmatella aurantiaca DW4/3-1] gi|309394334|gb|ADO71793.1| Iron-sulfur cluster-binding protein, Rieske family [Stigmatella aurantiaca DW4/3-1] Length=538 Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 151/527 (29%), Positives = 232/527 (45%), Gaps = 42/527 (7%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNP--AYFASWFPFPDNSGL--DWGALGECD---- 52 +++T +GHAGF+++T + ++ DPW++P A+ ++W P N L L E Sbjct 1 MRITFIGHAGFVVETDSAVVVMDPWLSPRGAFDSAWMQLPRNHHLAPQVRELLETSPKQR 60 Query 53 YLYVSHLHKDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRL 112 +LY+SH H+DHFD E L +D VL+P F LR+ Q G R D + L Sbjct 61 FLYISHEHRDHFDPEFLETLTKRDFSVLIPRFQRSALRDMFQAYGCKRIISCRDGQEIPL 120 Query 113 RGPNGDLDVMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVD-LDVLASEFGHIDV 171 P G + L G DS ++V + N+ND + D L + G ID Sbjct 121 --PGGGY----VKLFLTESGTNRDSGVLVRGEGQSFLNLNDCKIHDRLSRIMEAEGSIDF 174 Query 172 HMLQYSGAIWYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLA 231 Q+SGAIW+P Y+ + +KR + + + I V + +AGP CFL Sbjct 175 FSAQFSGAIWHPTCYEYSREVYEDISLKKRASKFEAVARAIQTVKPKAFLAAAGPACFLD 234 Query 232 PELRHLNDDGSDPANIF---PDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHP 288 P L HLN + NIF P+ FL + + +PG D H Sbjct 235 PSLFHLN---QEKVNIFPRAPELFAFLKERLPGNSTQYIEPMPGDVLDVASVDWV---HQ 288 Query 289 LPAEQVEAIFTTDKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSN 348 +P E + + Y+ YA MA V ++ A + + + LR L Sbjct 289 VP----ERLTDENLHDYLHAYAADMAHVFRERRRNILLAEVDMIHEQLRVELRR-KLDRL 343 Query 349 EICDGIGYPVELAIGP---ETIVLDFPKRAVREPIPD--ERFRYGFAIAPELVRTVLRDN 403 E+ +G P+ + + + + +DF +R V + + + ER RY +A + VL + Sbjct 344 ELHARVGMPLYMGLKELPGKWLRVDFRQRRV-DAVAEITERGRYTMVVAATDISRVL-ER 401 Query 404 EPDWVNTIFLSTRFRAWRVGGYNEYLYTFFKCLTDERIAY--ADGWFAEAHDDSSSITLN 461 + W + LS R R R E + F L E + D AEA + + +T Sbjct 402 KLTW-EELLLSFRHRMSRTPDVYEPILHAFLGLEIEDVGEFCEDLLAAEARRERTVVTAG 460 Query 462 G--WEIQRRCPHLKADLSKFGVVEGNTLTCNLHGWQWRLDD-GRCLT 505 G + +QR CPH ADL++ + G L C H WQ+ L D GRC T Sbjct 461 GKRYSVQRFCPHQGADLTEAWIEGGRYLLCPRHRWQFDLQDGGRCST 507 >gi|108759868|ref|YP_631675.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus xanthus DK 1622] gi|108463748|gb|ABF88933.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus xanthus DK 1622] Length=535 Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 153/526 (30%), Positives = 234/526 (45%), Gaps = 42/526 (7%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNP--AYFASWFPFPDNSGL------DWGALGECD 52 + +T +GHAGF+++T ++ DPW++ A+ ++W P N L G+ Sbjct 1 MHITFLGHAGFVVETAGAIVVMDPWLSSRGAFDSAWMQLPCNHHLAPRVREKLETPGKAR 60 Query 53 YLYVSHLHKDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRL 112 YLYVSH HKDHFD E L +D VL+P F +L++ + G + D + + Sbjct 61 YLYVSHEHKDHFDPEFLATLRQRDFTVLVPRFHRSELQDVFARYGCKQVIACEDGHEVPI 120 Query 113 RGPNGDLDVMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVD-LDVLASEFGHIDV 171 +G + L G DSA++V N+ND + D + + +E G IDV Sbjct 121 KGG-------YVKLFVSEQGTNRDSAVMVRGDGQCFLNINDCKLHDRMGRIVAEEGPIDV 173 Query 172 HMLQYSGAIWYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLA 231 Q+SGAIW+P Y+ PA A +KR+ + + + + + + +AGP FL Sbjct 174 FSAQFSGAIWHPTCYEYPAETYAAISLKKRESKFEAVARTLEVIQPRAYIAAAGPAAFLD 233 Query 232 PELRHLNDDGSDPANIFPDQ---MVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHP 288 P HLN + NIFP+ FL Q G+ L +PG D S Sbjct 234 PAQFHLN---FEKVNIFPNATQLFAFLRQRLPQGKTRYLEPMPGDVLDAKSLEFVS---- 286 Query 289 LPAEQVEAIFTTDKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSN 348 + E + + AY+ YA R V ++ A + + LR + L Sbjct 287 ---QVAERVTPENMKAYLHAYAKRQESVFRERRRNLLVAEVAEIHERLRVELQR-KLDLL 342 Query 349 EICDGIGYP--VELAIGPETIV-LDFPKRAVREPIPD--ERFRYGFAIAPELVRTVLRDN 403 ++ + +G P VEL P+ ++ +DF R V + D E RY + V VL D Sbjct 343 DLHERVGMPLYVELTELPDRLLRVDFKSRRV-HVVADIQEEVRYTLKTSAADVGRVL-DR 400 Query 404 EPDWVNTIFLSTRFRAWRVGG-YNEYLYTFFKCLTDERIAYADGWFA-EAHDDSSSITLN 461 + W + LS R R R Y L+ F ++ + DG + E+ + + + Sbjct 401 KLTWED-FLLSFRLRLSRNPDVYEPVLHGFLGVEIEDMREFCDGIRSTESQRERTVVEAG 459 Query 462 G--WEIQRRCPHLKADLSKFGVVEGNTLTCNLHGWQWRLDDGRCLT 505 G + IQR CPH ADLS+ V EG L C H WQ+ LD G T Sbjct 460 GRRFSIQRFCPHQGADLSEGWVEEGRYLVCPRHRWQFDLDAGGVCT 505 >gi|338534666|ref|YP_004668000.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus fulvus HW-1] gi|337260762|gb|AEI66922.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus fulvus HW-1] Length=535 Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 154/525 (30%), Positives = 231/525 (44%), Gaps = 40/525 (7%) Query 1 VQVTSVGHAGFLIQTQAGSILCDPWVNP--AYFASWFPFPDNSGL------DWGALGECD 52 + +T +GHAGF+++T ++ DPW++P A+ ++W P N L G+ Sbjct 1 MHITFLGHAGFVVETAGAIVVMDPWLSPRGAFDSAWMQLPCNHHLAPLVREKLETPGKER 60 Query 53 YLYVSHLHKDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRL 112 YLYVSH HKDHFD E L +D VL+P F +L++ K G R D + + Sbjct 61 YLYVSHEHKDHFDPEFLATVRQRDFSVLVPRFHRSELQDVFGKYGCKRVIACEDGHEVPI 120 Query 113 RGPNGDLDVMIIALRAPADGPIGDSALVVADGETTAFNMNDARPVDLDV-LASEFGHIDV 171 +G + L G DSA++V N+ND + D V + +E G IDV Sbjct 121 KGG-------YVKLFVSEQGTNRDSAVMVRGDGQCFLNINDCKLHDRMVRIVAEEGPIDV 173 Query 172 HMLQYSGAIWYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLA 231 Q+SGAIW+P Y+ A +KR+ + + + + + + +AGP FL Sbjct 174 FSAQFSGAIWHPTCYEYAPETYAAISLKKRESKFEAVARTLEVIQPRAYIAAAGPAAFLD 233 Query 232 PELRHLNDDGSDPANIFPDQ---MVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHP 288 P HLN + NIFP+ FL Q G L +PG D S Sbjct 234 PAQFHLN---FEEVNIFPNATQLFAFLKQRLPRGTARYLEPMPGDVLDAKSLEYVS---- 286 Query 289 LPAEQVEAIFTTDKAAYIADYADRMAPVLAAQKAGWAAAAGEPLLQPLRTLFEPIMLQSN 348 + E + + Y+ DYA R V ++ A + + LRT + L Sbjct 287 ---QVAERVTPENLRDYLHDYAKRQESVFRGRRRNLLVAEVREIHERLRTELQR-KLDLL 342 Query 349 EICDGIGYP--VELAIGPETIV-LDFPKRAVREPIP-DERFRYGFAIAPELVRTVLRDNE 404 ++ + +G P VEL PE ++ +DF R V E RY + V VL D + Sbjct 343 DLHERVGMPLYVELTELPEQLLRVDFKARRVHVVANIQEEVRYTLKTSAADVGRVL-DRK 401 Query 405 PDWVNTIFLSTRFRAWRVGG-YNEYLYTFFKCLTDERIAYADGWFA-EAHDDSSSITLNG 462 W + LS R R R Y L+ F ++ + +G + E+ + + + G Sbjct 402 LTWED-FLLSFRLRLSRNPDVYEPVLHGFLGVEIEDMREFCEGIRSTESQRERTVVEAGG 460 Query 463 --WEIQRRCPHLKADLSKFGVVEGNTLTCNLHGWQWRLDDGRCLT 505 + IQR CPH ADLS+ V EG L C H WQ+ L+ G T Sbjct 461 RRFSIQRFCPHQGADLSEGWVEEGRYLVCPRHRWQFDLEAGGVCT 505 >gi|256389348|ref|YP_003110912.1| Rieske (2Fe-2S) domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256355574|gb|ACU69071.1| Rieske (2Fe-2S) domain protein [Catenulispora acidiphila DSM 44928] Length=481 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 137/534 (26%), Positives = 210/534 (40%), Gaps = 79/534 (14%) Query 3 VTSVGHAGFLIQTQAGSILCDPWVNP--AYFASWFPFPDNSGLD-WGALGECDYLYVSHL 59 ++S GHAG ++T +LCDPWV+P A+ S FPFPDNS L L E +++ VS Sbjct 6 MSSTGHAGLRVETPDLRLLCDPWVSPGGAFLGSRFPFPDNSHLRAVPRLLEAEWVAVSSA 65 Query 60 HKDHFDAENLRAHVNKDAVVLLPDFPVPDLRNELQKLGFHRFFETTDSVKHRLRGPNGDL 119 DH D E L +++ V++P +P L + L G E V+ R P D Sbjct 66 QADHMDVEFLSG-LDESVRVVIPAYPSSVLHDRLSAAGVKNIVE----VEGWQRVPLTDR 120 Query 120 DVMIIALRAPADGPIGDSA--LVVADGETTAFNMNDARPVDLDVLASEFGHIDVHMLQYS 177 + + P P+ A LVVADG + + NDAR M++ Sbjct 121 GDWLTVV--PEQSPMAHRAAFLVVADG-VSVLHCNDAR--------LSLSQTRRAMIEVG 169 Query 178 GAIWYPMVYDMPARAKDAFGAQKRQRQMDRARQYIAQVGATWVVPSAGPPCFLAPELRHL 237 G + D + + ++ + V V+P GP CFL PEL Sbjct 170 GPL-------------DLLALDASEERFRAVKRLVRAVKPRLVMPYGGPGCFLDPELMEH 216 Query 238 NDDGSDPANIFPDQMVFLDQMRAHGQDGGLLMIPGSTADFTGTTLNSLRHPLPAEQVEAI 297 N A + P ++ L ++PG + T T+ +R P E Sbjct 217 N------AVVAPGEL----------PAETLTLLPGDSVRITPTSYECVRDP----HWEGF 256 Query 298 FTTDKAAYIADYADRMAPVLAAQKAG-WAAA----AGEPLLQPLRTLFEPIMLQSNEICD 352 +D A +A++ + A A + A W A AG L F + S + Sbjct 257 AYSDSVA-VANHLETYAASRAQEIADVWEAYPDPDAGSGLEDRFAEHFVRLGRMSPYFLE 315 Query 353 GIGYPVELAI-GPETIVLDFPKRAVREPIPDERFRYGFAIAPELVRTVLRDNEPDWVNTI 411 I V + G + V D V DE +Y F + + VL E W + + Sbjct 316 RIAMTVRFKVAGADGGVWD-----VHLGTTDETAQYTFRVEARWLEAVL-GGEIRWED-L 368 Query 412 FLSTRFRAWRVGGYN-EYLYTFFKCLTDERIAYADGWFAEAHDDSSSITLNG----WEIQ 466 LS R + YL+ + + + + + D S++TL +E+ Sbjct 369 LLSRRIHVEHAPEADGSYLFGLLMHADADALQAIEDY--DKRDPDSTVTLTSGDRTFEVT 426 Query 467 RRCPHLKADLSKFGVV----EGNTLTCNLHGWQWRLDDGRCLTARGHQLRSSRP 516 R CPH DL++ V+ EG L C H + + L G CL AR + + P Sbjct 427 RYCPHSGEDLAEGAVIDEAPEGLVLRCLAHNFDFSLTTGLCLNARCEPIVVAAP 480 Lambda K H 0.322 0.139 0.445 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1125972425712 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40